BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 2fb6d7efe9ae74e1030005ef523aa7b3.TrEMBL.fasta
13 sequences; 2,175 total letters
Query= ACIAD2267
Length=161
Score E
Sequences producing significant alignments: (Bits) Value
Q6FA55 DUF3465 domain-containing protein [Acinetobacter baylyi (s... 329 1e-121
A0A7G2SD51 DUF3465 domain-containing protein [Acinetobacter sp] 327 8e-121
A0A3A8F161 DUF3465 domain-containing protein [Acinetobacter guerrae] 196 7e-69
A0A3F3LBR3 DUF3465 domain-containing protein [Acinetobacter ursin... 194 3e-68
A0A4Q7B9G1 DUF3465 domain-containing protein [Acinetobacter sp. W... 194 8e-68
A0A7T9UHS1 DUF3465 domain-containing protein [Acinetobacter ursin... 193 1e-67
A0A385C1Z9 DUF3465 domain-containing protein [Acinetobacter wuhou... 193 1e-67
A0A4Q7BEV4 DUF3465 domain-containing protein [Acinetobacter sp. W... 193 1e-67
A0A427PVB2 DUF3465 domain-containing protein [Acinetobacter sp. F... 192 2e-67
N9DDK8 DUF3465 domain-containing protein [Acinetobacter ursingii ... 192 2e-67
A0A3G2T0W5 DUF3465 domain-containing protein [Acinetobacter wuhou... 192 5e-67
Q08804 DNA for RVC repeated sequence [Vibrio cholerae] 151 1e-51
C6KEL3 DUF3465 domain-containing protein [Methylophilus methylotr... 119 1e-38
>Q6FA55 DUF3465 domain-containing protein [Acinetobacter baylyi
(strain ATCC 33305 / BD413 / ADP1)]
Length=160
Score = 329 bits (844), Expect = 1e-121
Identities = 160/160 (100%), Positives = 160/160 (100%), Gaps = 0/160 (0%)
Query 1 MNRTGLYSAIAVVAFATGYYTYFKADKNQNLNSSRPEFSEKLESSKQYNLGMEAISKAFQ 60
MNRTGLYSAIAVVAFATGYYTYFKADKNQNLNSSRPEFSEKLESSKQYNLGMEAISKAFQ
Sbjct 1 MNRTGLYSAIAVVAFATGYYTYFKADKNQNLNSSRPEFSEKLESSKQYNLGMEAISKAFQ 60
Query 61 NRQSNVEVQAIGKVKAILPDDNEGSRHQKFILSLDNGLTVLVAHNIDLAPRIDGLQKGDM 120
NRQSNVEVQAIGKVKAILPDDNEGSRHQKFILSLDNGLTVLVAHNIDLAPRIDGLQKGDM
Sbjct 61 NRQSNVEVQAIGKVKAILPDDNEGSRHQKFILSLDNGLTVLVAHNIDLAPRIDGLQKGDM 120
Query 121 VEFLGEYEYSPKGGVIHWTHHDPQGRHSNGWLRYQGRTYQ 160
VEFLGEYEYSPKGGVIHWTHHDPQGRHSNGWLRYQGRTYQ
Sbjct 121 VEFLGEYEYSPKGGVIHWTHHDPQGRHSNGWLRYQGRTYQ 160
>A0A7G2SD51 DUF3465 domain-containing protein [Acinetobacter sp]
Length=160
Score = 327 bits (838), Expect = 8e-121
Identities = 159/160 (99%), Positives = 159/160 (99%), Gaps = 0/160 (0%)
Query 1 MNRTGLYSAIAVVAFATGYYTYFKADKNQNLNSSRPEFSEKLESSKQYNLGMEAISKAFQ 60
MNRTGLYSAIAVVAFATGYYTYFKADKNQNLNSSRPE SEKLESSKQYNLGMEAISKAFQ
Sbjct 1 MNRTGLYSAIAVVAFATGYYTYFKADKNQNLNSSRPEISEKLESSKQYNLGMEAISKAFQ 60
Query 61 NRQSNVEVQAIGKVKAILPDDNEGSRHQKFILSLDNGLTVLVAHNIDLAPRIDGLQKGDM 120
NRQSNVEVQAIGKVKAILPDDNEGSRHQKFILSLDNGLTVLVAHNIDLAPRIDGLQKGDM
Sbjct 61 NRQSNVEVQAIGKVKAILPDDNEGSRHQKFILSLDNGLTVLVAHNIDLAPRIDGLQKGDM 120
Query 121 VEFLGEYEYSPKGGVIHWTHHDPQGRHSNGWLRYQGRTYQ 160
VEFLGEYEYSPKGGVIHWTHHDPQGRHSNGWLRYQGRTYQ
Sbjct 121 VEFLGEYEYSPKGGVIHWTHHDPQGRHSNGWLRYQGRTYQ 160
>A0A3A8F161 DUF3465 domain-containing protein [Acinetobacter guerrae]
Length=168
Score = 196 bits (498), Expect = 7e-69
Identities = 96/168 (57%), Positives = 115/168 (68%), Gaps = 8/168 (5%)
Query 1 MNRTGLYSAIAVVAFATGYYTYFKADKNQNLNSSRP--------EFSEKLESSKQYNLGM 52
MN+ Y IA++AF GYYTY + N L + R E Q G+
Sbjct 1 MNKKLSYLMIALIAFVAGYYTYSTQNPNSQLKTDRVGHEMQNQIALGESHTDLTQAQNGL 60
Query 53 EAISKAFQNRQSNVEVQAIGKVKAILPDDNEGSRHQKFILSLDNGLTVLVAHNIDLAPRI 112
+AI+ A+ QSN++VQ GKVK +LPDDN+GSRHQKFIL L NGLTVLVAHNIDLAPRI
Sbjct 61 QAITNAYAQHQSNIQVQTSGKVKVVLPDDNDGSRHQKFILGLGNGLTVLVAHNIDLAPRI 120
Query 113 DGLQKGDMVEFLGEYEYSPKGGVIHWTHHDPQGRHSNGWLRYQGRTYQ 160
+ L+KGD VEF GEYEYSPKGGVIHWTH DP+G H NGWL++ G+ YQ
Sbjct 121 EHLKKGDTVEFNGEYEYSPKGGVIHWTHRDPKGFHENGWLKHDGQIYQ 168
>A0A3F3LBR3 DUF3465 domain-containing protein [Acinetobacter ursingii]
Length=168
Score = 194 bits (494), Expect = 3e-68
Identities = 94/168 (56%), Positives = 117/168 (70%), Gaps = 8/168 (5%)
Query 1 MNRTGLYSAIAVVAFATGYYTYFKADKNQNLNSSRPE--------FSEKLESSKQYNLGM 52
M++ Y IA++AF GYY Y N LN+ + ++ Q G+
Sbjct 1 MSKKQNYLMIAIIAFIAGYYAYSVIKPNSRLNNDTTHHELQNQVVLGQNQDNQTQAQQGL 60
Query 53 EAISKAFQNRQSNVEVQAIGKVKAILPDDNEGSRHQKFILSLDNGLTVLVAHNIDLAPRI 112
+AIS AF +S+++VQ GKVKA+L DD+EGSRHQKFILSL NGLTVLVAHNIDLAPRI
Sbjct 61 QAISDAFTQHRSHIQVQTSGKVKAVLADDHEGSRHQKFILSLSNGLTVLVAHNIDLAPRI 120
Query 113 DGLQKGDMVEFLGEYEYSPKGGVIHWTHHDPQGRHSNGWLRYQGRTYQ 160
+ L+KGD VEF GEYEY+PKGGVIHWTH DP+G H NGWL++ G+TYQ
Sbjct 121 EHLKKGDTVEFNGEYEYNPKGGVIHWTHRDPRGTHENGWLKHNGQTYQ 168
>A0A4Q7B9G1 DUF3465 domain-containing protein [Acinetobacter sp.
WCHAc060025]
Length=179
Score = 194 bits (492), Expect = 8e-68
Identities = 100/177 (56%), Positives = 123/177 (69%), Gaps = 26/177 (15%)
Query 5 GLYSAIAVVAFATGYYTYFKADKNQNLNSSRPEFSEKLE--------------------- 43
G+ +AIA++A A YF D NQ+ N+S+ + +
Sbjct 8 GIGAAIALLAAA-----YFGMDSNQSKNNSQAQAESSQQHQIDNSKNTQTQATHTDIESH 62
Query 44 SSKQYNLGMEAISKAFQNRQSNVEVQAIGKVKAILPDDNEGSRHQKFILSLDNGLTVLVA 103
S+ Q G+E I KA+ + SNV+VQ+IGKVKAIL DDNEGSRHQKFILSLDNGLTVLVA
Sbjct 63 SNSQNQHGLEVIRKAYDKKLSNVQVQSIGKVKAILRDDNEGSRHQKFILSLDNGLTVLVA 122
Query 104 HNIDLAPRIDGLQKGDMVEFLGEYEYSPKGGVIHWTHHDPQGRHSNGWLRYQGRTYQ 160
HNIDLAPRI+ L+KGDMVEF GEYEYS +GGV+HWTHHDP RH+NGWL++ G+TYQ
Sbjct 123 HNIDLAPRIENLKKGDMVEFFGEYEYSNQGGVMHWTHHDPSRRHTNGWLKHDGKTYQ 179
>A0A7T9UHS1 DUF3465 domain-containing protein [Acinetobacter ursingii]
Length=168
Score = 193 bits (490), Expect = 1e-67
Identities = 92/168 (55%), Positives = 117/168 (70%), Gaps = 8/168 (5%)
Query 1 MNRTGLYSAIAVVAFATGYYTYFKADKNQNLNSSRPE--------FSEKLESSKQYNLGM 52
M++ Y IA++AF GYY Y N LN+ + ++ Q G+
Sbjct 1 MSKKQNYLMIAIIAFIAGYYAYSVIKPNSRLNNETTHHEMQNQVVLDQNQDNQTQAQQGL 60
Query 53 EAISKAFQNRQSNVEVQAIGKVKAILPDDNEGSRHQKFILSLDNGLTVLVAHNIDLAPRI 112
+AIS AF +S+++VQ GKVKA+L DD+EGSRHQKFILSL NGLTVLVAHNIDLAPRI
Sbjct 61 QAISDAFAQHRSHIQVQTSGKVKAVLADDHEGSRHQKFILSLANGLTVLVAHNIDLAPRI 120
Query 113 DGLQKGDMVEFLGEYEYSPKGGVIHWTHHDPQGRHSNGWLRYQGRTYQ 160
+ L+KGD VEF GEYEY+PKGG++HWTH DP+G H NGWL++ G+TYQ
Sbjct 121 EHLKKGDTVEFNGEYEYNPKGGIVHWTHRDPRGTHENGWLKHNGQTYQ 168
>A0A385C1Z9 DUF3465 domain-containing protein [Acinetobacter wuhouensis]
Length=180
Score = 193 bits (491), Expect = 1e-67
Identities = 100/178 (56%), Positives = 123/178 (69%), Gaps = 27/178 (15%)
Query 5 GLYSAIAVVAFATGYYTYFKADKNQNLNSSRPEFSEKLE--------------------- 43
G+ +AIA++A A YF D NQ+ N+S+ + +
Sbjct 8 GIGTAIALLAAA-----YFGMDSNQSKNNSQAQAESSQQHQIDNSKNTQTQTATHTDIES 62
Query 44 -SSKQYNLGMEAISKAFQNRQSNVEVQAIGKVKAILPDDNEGSRHQKFILSLDNGLTVLV 102
S+ Q G+E I KA+ + SNV+VQ+IGKVKAIL DDNEGSRHQKFILSLDNGLTVLV
Sbjct 63 HSNSQNQHGLEVIRKAYDKKLSNVQVQSIGKVKAILRDDNEGSRHQKFILSLDNGLTVLV 122
Query 103 AHNIDLAPRIDGLQKGDMVEFLGEYEYSPKGGVIHWTHHDPQGRHSNGWLRYQGRTYQ 160
AHNIDLAPRI+ L+KGDMVEF GEYEYS +GGV+HWTHHDP RH+NGWL++ G+TYQ
Sbjct 123 AHNIDLAPRIENLKKGDMVEFFGEYEYSNQGGVMHWTHHDPSRRHTNGWLKHDGKTYQ 180
>A0A4Q7BEV4 DUF3465 domain-containing protein [Acinetobacter sp.
WCHAc060033]
Length=180
Score = 193 bits (491), Expect = 1e-67
Identities = 100/178 (56%), Positives = 123/178 (69%), Gaps = 27/178 (15%)
Query 5 GLYSAIAVVAFATGYYTYFKADKNQNLNSSRPEFSEKLE--------------------- 43
G+ +AIA++A A YF D NQ+ N+S+ + +
Sbjct 8 GIGAAIALLAAA-----YFGMDSNQSKNNSQAQAESSQQHQIDNSKNTQTQTATHTDIES 62
Query 44 -SSKQYNLGMEAISKAFQNRQSNVEVQAIGKVKAILPDDNEGSRHQKFILSLDNGLTVLV 102
S+ Q G+E I KA+ + SNV+VQ+IGKVKAIL DDNEGSRHQKFILSLDNGLTVLV
Sbjct 63 HSNSQNQHGLEVIRKAYDKKLSNVQVQSIGKVKAILRDDNEGSRHQKFILSLDNGLTVLV 122
Query 103 AHNIDLAPRIDGLQKGDMVEFLGEYEYSPKGGVIHWTHHDPQGRHSNGWLRYQGRTYQ 160
AHNIDLAPRI+ L+KGDMVEF GEYEYS +GGV+HWTHHDP RH+NGWL++ G+TYQ
Sbjct 123 AHNIDLAPRIENLKKGDMVEFFGEYEYSNQGGVMHWTHHDPSRRHTNGWLKHNGKTYQ 180
>A0A427PVB2 DUF3465 domain-containing protein [Acinetobacter sp.
FDAARGOS_515]
Length=168
Score = 192 bits (489), Expect = 2e-67
Identities = 92/168 (55%), Positives = 117/168 (70%), Gaps = 8/168 (5%)
Query 1 MNRTGLYSAIAVVAFATGYYTYFKADKNQNLNSSRPE--------FSEKLESSKQYNLGM 52
M++ Y IA++AF GYY Y N LN+ + ++ Q G+
Sbjct 1 MSKKQNYLMIAIIAFIAGYYAYSFIKPNSRLNNDTTHHEMQNQVVLGQNQDNQTQAQQGL 60
Query 53 EAISKAFQNRQSNVEVQAIGKVKAILPDDNEGSRHQKFILSLDNGLTVLVAHNIDLAPRI 112
+AIS AF +S+++VQ GKVKA+L DD+EGSRHQKFILSL NGLTVLVAHNIDLAPRI
Sbjct 61 QAISDAFAQHRSHIQVQTSGKVKAVLADDHEGSRHQKFILSLANGLTVLVAHNIDLAPRI 120
Query 113 DGLQKGDMVEFLGEYEYSPKGGVIHWTHHDPQGRHSNGWLRYQGRTYQ 160
+ L+KGD VEF GEYEY+PKGG++HWTH DP+G H NGWL++ G+TYQ
Sbjct 121 EHLKKGDTVEFNGEYEYNPKGGIVHWTHRDPRGTHENGWLKHNGQTYQ 168
>N9DDK8 DUF3465 domain-containing protein [Acinetobacter ursingii
ANC 3649]
Length=168
Score = 192 bits (489), Expect = 2e-67
Identities = 92/168 (55%), Positives = 117/168 (70%), Gaps = 8/168 (5%)
Query 1 MNRTGLYSAIAVVAFATGYYTYFKADKNQNLNSSRPE--------FSEKLESSKQYNLGM 52
M++ Y IA++AF GYY Y N LN+ + ++ Q G+
Sbjct 1 MSKKQNYLMIAIIAFIAGYYAYSFIKPNSRLNNDTTHHEMQNQVVLGQNQDNQTQAQQGL 60
Query 53 EAISKAFQNRQSNVEVQAIGKVKAILPDDNEGSRHQKFILSLDNGLTVLVAHNIDLAPRI 112
+AIS AF +S+++VQ GKVKA+L DD+EGSRHQKFILSL NGLTVLVAHNIDLAPRI
Sbjct 61 QAISDAFAQHRSHIQVQTSGKVKAVLADDHEGSRHQKFILSLANGLTVLVAHNIDLAPRI 120
Query 113 DGLQKGDMVEFLGEYEYSPKGGVIHWTHHDPQGRHSNGWLRYQGRTYQ 160
+ L+KGD VEF GEYEY+PKGG++HWTH DP+G H NGWL++ G+TYQ
Sbjct 121 EHLKKGDTVEFNGEYEYNPKGGIVHWTHRDPRGTHENGWLKHNGQTYQ 168
>A0A3G2T0W5 DUF3465 domain-containing protein [Acinetobacter wuhouensis]
Length=180
Score = 192 bits (487), Expect = 5e-67
Identities = 102/178 (57%), Positives = 126/178 (71%), Gaps = 27/178 (15%)
Query 5 GLYSAIAVVAFATGYYTYFKADKNQNLNSS--RPEFSEKLE------------------- 43
G+ +AIA++A A YF D NQ+ N+S + E S++ +
Sbjct 8 GIGAAIALLAAA-----YFGMDSNQSKNNSLAQAESSQQHQIDNSKNTQTQTATHTDIES 62
Query 44 -SSKQYNLGMEAISKAFQNRQSNVEVQAIGKVKAILPDDNEGSRHQKFILSLDNGLTVLV 102
S+ Q G+E I KA+ + SNV+VQ+IGKVKAIL DDNEGSRHQKFILSLDNGLTVLV
Sbjct 63 HSNSQNQHGLEVIRKAYDKKLSNVQVQSIGKVKAILRDDNEGSRHQKFILSLDNGLTVLV 122
Query 103 AHNIDLAPRIDGLQKGDMVEFLGEYEYSPKGGVIHWTHHDPQGRHSNGWLRYQGRTYQ 160
AHNIDLAPRI+ L+KGDMVEFLGEYEYS +GGV+HWTHHDP RH+NGWL++ G+ YQ
Sbjct 123 AHNIDLAPRIENLKKGDMVEFLGEYEYSNQGGVMHWTHHDPSRRHTNGWLKHDGKIYQ 180
>Q08804 DNA for RVC repeated sequence [Vibrio cholerae]
Length=134
Score = 151 bits (381), Expect = 1e-51
Identities = 64/106 (60%), Positives = 89/106 (84%), Gaps = 0/106 (0%)
Query 55 ISKAFQNRQSNVEVQAIGKVKAILPDDNEGSRHQKFILSLDNGLTVLVAHNIDLAPRIDG 114
+ +A+Q++QS+++VQ G+V +LPDDN+GS+HQKFIL L++G T+LVAHNIDLAPRI
Sbjct 29 LQQAYQSQQSDLQVQGFGQVVKVLPDDNDGSKHQKFILKLNSGQTLLVAHNIDLAPRIPN 88
Query 115 LQKGDMVEFLGEYEYSPKGGVIHWTHHDPQGRHSNGWLRYQGRTYQ 160
L+ GD VEF GEYE++ KGGV+HWTH DPQ RH++GWL++ G+ Y+
Sbjct 89 LKVGDSVEFYGEYEWNKKGGVLHWTHKDPQNRHAHGWLKHNGQVYE 134
>C6KEL3 DUF3465 domain-containing protein [Methylophilus methylotrophus]
Length=162
Score = 119 bits (298), Expect = 1e-38
Identities = 53/107 (50%), Positives = 79/107 (74%), Gaps = 2/107 (2%)
Query 54 AISKAFQNRQSNVEVQAIGKVKAILPDDNEGSRHQKFILSLDNGLTVLVAHNIDLAPRID 113
A+ +AF +QS+V ++ G VK +LPDD +G++HQ+F++++ T+L AHNIDLA R D
Sbjct 58 ALKQAFAQKQSHVWLEGNGIVKKLLPDDTKGAKHQRFLVTIAPEQTLLFAHNIDLAQRAD 117
Query 114 GLQKGDMVEFLGEYEYSPKGGVIHWTHHDPQGRHSNGWLRYQGRTYQ 160
+ GD V+F GEY Y+PKGG++HWTHHDP G+ GW++ G+TY+
Sbjct 118 -VNVGDQVQFKGEYIYNPKGGIMHWTHHDPNGK-QGGWIKVNGQTYE 162
Lambda K H a alpha
0.319 0.136 0.404 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 220091
Database: 2fb6d7efe9ae74e1030005ef523aa7b3.TrEMBL.fasta
Posted date: Jun 3, 2024 10:39 AM
Number of letters in database: 2,175
Number of sequences in database: 13
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
