BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: c1cf2350f9b01e154c11a9c795347dcd.SwissProt.fasta
           2 sequences; 2,916 total letters



Query= ACIAD2292

Length=120
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q5Z9S8 ABC transporter G family member 42 [Oryza sativa subsp. ja...  35.8    8e-07
Q94A18 ABC transporter G family member 29 [Arabidopsis thaliana]      33.9    4e-06


>Q5Z9S8 ABC transporter G family member 42 [Oryza sativa subsp. 
japonica]
Length=1500

 Score = 35.8 bits (81),  Expect = 8e-07
 Identities = 16/47 (34%), Positives = 28/47 (60%), Gaps = 4/47 (9%)

Query  58   SLMLDQQGHYNHSILMLVMLGISGGFIYGVGFLPKFWLWKWLFSPLI  104
            S+++ Q G      L L++  + GGF+    F+PK+W+W +  SPL+
Sbjct  693  SMIIAQTG----GALALLIFFVLGGFLLPKAFIPKWWIWGYWVSPLM  735


 Score = 23.9 bits (50),  Expect = 0.010
 Identities = 8/28 (29%), Positives = 14/28 (50%), Gaps = 0/28 (0%)

Query  76    MLGISGGFIYGVGFLPKFWLWKWLFSPL  103
             +  +  GF      +PK+W+W +   PL
Sbjct  1399  LFNLFSGFFIPRPRIPKWWIWYYWLCPL  1426


 Score = 18.1 bits (35),  Expect = 0.82
 Identities = 5/19 (26%), Positives = 12/19 (63%), Gaps = 0/19 (0%)

Query  12    TIKIWMRNKIMAQTMTTPE  30
             T  ++ +NK++   ++ PE
Sbjct  1188  TSDLYKQNKVLVNQLSQPE  1206


 Score = 18.1 bits (35),  Expect = 0.82
 Identities = 11/34 (32%), Positives = 14/34 (41%), Gaps = 1/34 (3%)

Query  84    IYGVGFLPKFWLWKWLFSPLISWPLMLLGYYIWL  117
             I+   F   F L+   F P    P   + YY WL
Sbjct  1391  IFAAAFYSLFNLFSGFFIPRPRIPKWWIWYY-WL  1423


>Q94A18 ABC transporter G family member 29 [Arabidopsis thaliana]
Length=1416

 Score = 33.9 bits (76),  Expect = 4e-06
 Identities = 13/32 (41%), Positives = 22/32 (69%), Gaps = 0/32 (0%)

Query  72   LMLVMLGISGGFIYGVGFLPKFWLWKWLFSPL  103
            L++++L + GGFI   G +PK+W W +  SP+
Sbjct  668  LVILLLFLLGGFIVPRGEIPKWWKWAYWVSPM  699


 Score = 24.6 bits (52),  Expect = 0.005
 Identities = 8/31 (26%), Positives = 17/31 (55%), Gaps = 1/31 (3%)

Query  76    MLGISGGFIYGVGFLPKFWLWKWLFSPLISW  106
             +  +  GF+     +PK+W+W +   P ++W
Sbjct  1314  LFNLFSGFVIPRPRIPKWWIWYYWICP-VAW  1343


 Score = 18.1 bits (35),  Expect = 0.82
 Identities = 5/26 (19%), Positives = 16/26 (62%), Gaps = 0/26 (0%)

Query  12    TIKIWMRNKIMAQTMTTPEKTKAQVF  37
             T  ++ +NK + + ++TP +  + ++
Sbjct  1103  TSSLYQQNKNLVKELSTPPQGASDLY  1128



Lambda      K        H        a         alpha
   0.333    0.144    0.481    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 241910


  Database: c1cf2350f9b01e154c11a9c795347dcd.SwissProt.fasta
    Posted date:  Jun 3, 2024  10:37 AM
  Number of letters in database: 2,916
  Number of sequences in database:  2



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40