BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 82c8def3adc3852c52952bfd602c5449.SwissProt.fasta
7 sequences; 2,233 total letters
Query= ACIAD2294
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
Q5E4D5 UPF0319 protein VF_1616 [Aliivibrio fischeri (strain ATCC ... 49.3 4e-11
B5FF49 UPF0319 protein VFMJ11_1730 [Aliivibrio fischeri (strain M... 47.4 2e-10
B6EI75 UPF0319 protein VSAL_I2129 [Aliivibrio salmonicida (strain... 45.1 1e-09
Q7MMT3 UPF0319 protein VV0984 [Vibrio vulnificus (strain YJ016)] 43.9 4e-09
Q8ZXT3 Uncharacterized protein PAE1111 [Pyrobaculum aerophilum (s... 40.4 4e-08
Q87FU4 UPF0319 protein VPA1584 [Vibrio parahaemolyticus serotype ... 38.5 2e-07
F1MH24 AP2-associated protein kinase 1 [Bos taurus] 37.0 1e-06
>Q5E4D5 UPF0319 protein VF_1616 [Aliivibrio fischeri (strain ATCC
700601 / ES114)]
Length=209
Score = 49.3 bits (116), Expect = 4e-11
Identities = 51/212 (24%), Positives = 91/212 (43%), Gaps = 26/212 (12%)
Query 7 AAIVGLIMSSSVFAAATLTAPEDIVILAVNDQEVN-TGLFRGAKNNYKIDAGENSISVRY 65
AA L+ S S AA LT P+++ ++ V++QEV F + ++ G++ I RY
Sbjct 8 AASFCLLSSISAHAAIQLTVPDEVELILVDNQEVKLESSFFSTTSTLDLENGKHQIVFRY 67
Query 66 QGYFDHTDGEHDILKSGVVTIKTPALQDNQ-SYQLALINPPQNFEAAKKYAEQPTIGLYD 124
F G+ +I+ S + + T + +D + S++ N P E AK + L D
Sbjct 68 NPVF--KQGKDNIIVSSDIIVSTFSAEDKEISFKFPTYNSP---EKAKAFNRDLNWELID 122
Query 125 KNHQLLVQQTGANTEAKPWLSSGIF------GRAYDLTQKKTAPAQQPAPVYAPVENNT- 177
KN+ + P+ S + GR K + PA + T
Sbjct 123 KNNNSI-----------PFAQSQLIYNGMQVGRNIQFEVAKFNTTEHPAAFKEGMVTVTH 171
Query 178 -VVGRNSMDTTADQKLIELWKKSSKAERQKFM 208
+ D TA+Q L ++K+ +A +++F+
Sbjct 172 KEIKNEQGDNTAEQMLHYWYEKADQATKERFL 203
>B5FF49 UPF0319 protein VFMJ11_1730 [Aliivibrio fischeri (strain
MJ11)]
Length=209
Score = 47.4 bits (111), Expect = 2e-10
Identities = 50/212 (24%), Positives = 91/212 (43%), Gaps = 26/212 (12%)
Query 7 AAIVGLIMSSSVFAAATLTAPEDIVILAVNDQEVN-TGLFRGAKNNYKIDAGENSISVRY 65
AA L+ S S AA LT P+++ ++ V++QEV F + ++ G++ I RY
Sbjct 8 AASFCLLSSISAHAAIQLTVPDEVELILVDNQEVKLESSFFSTTSTLDLENGKHQIVFRY 67
Query 66 QGYFDHTDGEHDILKSGVVTIKTPALQDNQ-SYQLALINPPQNFEAAKKYAEQPTIGLYD 124
F G+ +I+ S + + T + +D + S++ N P E AK + L D
Sbjct 68 NPVF--KQGKDNIIVSSDIIVSTFSAEDKEISFKFPTYNSP---EKAKAFNRDLNWELID 122
Query 125 KNHQLLVQQTGANTEAKPWLSSGIF------GRAYDLTQKKTAPAQQPAPVYAPVENNT- 177
KN+ + P+ S + GR K + PA + T
Sbjct 123 KNNNSI-----------PFAQSQLIYNGMQVGRNIQFEVAKFNTTEHPAAFKEGMLTVTH 171
Query 178 -VVGRNSMDTTADQKLIELWKKSSKAERQKFM 208
+ + TA+Q L ++K+ +A +++F+
Sbjct 172 KEIKNEQGENTAEQMLHYWYEKADQATKERFL 203
>B6EI75 UPF0319 protein VSAL_I2129 [Aliivibrio salmonicida (strain
LFI1238)]
Length=208
Score = 45.1 bits (105), Expect = 1e-09
Identities = 32/107 (30%), Positives = 51/107 (48%), Gaps = 2/107 (2%)
Query 5 FTAAIVGLIMSSSVFAAATLTAPEDIVILAVNDQEVN-TGLFRGAKNNYKIDAGENSISV 63
F AA + L+ S S A+ LT P ++ +L V+ QEV F + K+D GE+ I
Sbjct 6 FLAAGLCLLTSLSASASIQLTVPSEVELLLVDSQEVKLDSSFFSTTSTLKLDDGEHQIVF 65
Query 64 RYQGYFDHTDGEHDILKSGVVTIKTPALQDNQSYQLALINPPQNFEA 110
RY F ++ I+ S ++ K A + S+ N P+ +A
Sbjct 66 RYNPVFKQ-GKDNIIVSSDIIVSKFTATNQDISFVFPSYNSPEKAKA 111
>Q7MMT3 UPF0319 protein VV0984 [Vibrio vulnificus (strain YJ016)]
Length=245
Score = 43.9 bits (102), Expect = 4e-09
Identities = 34/118 (29%), Positives = 55/118 (47%), Gaps = 4/118 (3%)
Query 9 IVGLIMSSSVFAAATLTAPEDIVILAVNDQEVNTGLFRGAKNNYKIDAGENSISVRYQGY 68
++G ++SSSVFA + D+ L VN ++V G F K+ D G N + VR +
Sbjct 9 MLGALVSSSVFADVKVNIHRDVAPLVVNGEKV--GFFISKKSVLDFDNGLNQLVVRVEKL 66
Query 69 FDHTDGEHDILKSGVVTIKTPALQDNQSYQLALINPPQNFEAAKKYAEQPTIGLYDKN 126
D+ GE + S V I A ++ L + + + A+++ P L DKN
Sbjct 67 IDNNQGEKEKFNSKPVIITFKA--SDRELDLFVDSVISRSKDAEEFELNPFFILKDKN 122
>Q8ZXT3 Uncharacterized protein PAE1111 [Pyrobaculum aerophilum
(strain ATCC 51768 / DSM 7523 / JCM 9630 / CIP 104966 / NBRC
100827 / IM2)]
Length=182
Score = 40.4 bits (93), Expect = 4e-08
Identities = 45/176 (26%), Positives = 72/176 (41%), Gaps = 15/176 (9%)
Query 29 DIVILAVNDQEVNTGLFRGAKNNY-KIDAGENSISVRYQGYFDHTDGEHDILKSGVVTIK 87
++V++ + EV A N+Y + G VR G + + K G V +
Sbjct 9 EVVLMRGDITEVEADAIVNAANSYLEHGGGVAGAIVRKGGQVIQEESREWVRKHGPVPVG 68
Query 88 TPALQD----NQSYQLALINPPQNFEAAKKYAEQPTIGLYDKNHQLLVQQTGANTEAKPW 143
A+ Y + + P E +K AE KN L ++ G + A P
Sbjct 69 DVAVTSAGRLKAKYVIHAVGPRCGVEPIEKLAEAV------KNALLKAEELGLVSIALPA 122
Query 144 LSSGIFGRAYDLTQKKTAPA-QQPAPVYAPVENNTVVGRNSMDTTADQKLIELWKK 198
+S+GIFG YD ++ A A ++ AP + VV A QK +E++KK
Sbjct 123 ISTGIFGCPYDAAAEQMATAIREVAPALRSIRRILVV---LYGEEAYQKFLEVFKK 175
>Q87FU4 UPF0319 protein VPA1584 [Vibrio parahaemolyticus serotype
O3:K6 (strain RIMD 2210633)]
Length=223
Score = 38.5 bits (88), Expect = 2e-07
Identities = 23/82 (28%), Positives = 39/82 (48%), Gaps = 5/82 (6%)
Query 3 LKFTAAIVGLIMSSSVFAAATLTAPEDIVILAVNDQEVN-TGLFRGAKNNYKIDAGENSI 61
+K + L MS FA T++ P+D+ +LA N ++ +G F ++ + G N +
Sbjct 4 IKPLTCALALAMSGMAFADVTVSVPDDVSVLAANGEKAKLSGGFFASEKALTLPDGVNQV 63
Query 62 SVRYQGYF----DHTDGEHDIL 79
RY YF D E D++
Sbjct 64 VFRYAPYFNQGNDRLSVESDVI 85
>F1MH24 AP2-associated protein kinase 1 [Bos taurus]
Length=957
Score = 37.0 bits (84), Expect = 1e-06
Identities = 37/122 (30%), Positives = 52/122 (43%), Gaps = 9/122 (7%)
Query 84 VTIKTPALQDNQSYQLALINPPQNFEAAKKYAEQPTIGLYDKNHQLLVQQTGANTEAKPW 143
V + P + S Q + QNF ++ +Q L+ + QLL QQ A + K
Sbjct 512 VIAQFPVVSQGSSQQQLI----QNFYQQQQQQQQLATALHQQ--QLLTQQ--AALQQKTT 563
Query 144 LSSGIFGRAYDLTQKKTAPAQQPAPVYAPVENNTVVGRNSMDTTADQKLIELWKKSS-KA 202
++ +A APAQ+PA + APV V T QKL L SS KA
Sbjct 564 AAAAPQPQAQPAAAASPAPAQEPAQIQAPVRQQPKVQTTPPPTIQGQKLGSLTPPSSPKA 623
Query 203 ER 204
+R
Sbjct 624 QR 625
Score = 18.9 bits (37), Expect = 0.78
Identities = 7/14 (50%), Positives = 9/14 (64%), Gaps = 0/14 (0%)
Query 157 QKKTAPAQQPAPVY 170
Q+ PAQQPA +
Sbjct 475 QQTAPPAQQPAGTF 488
Score = 15.8 bits (29), Expect = 7.3
Identities = 6/18 (33%), Positives = 9/18 (50%), Gaps = 0/18 (0%)
Query 157 QKKTAPAQQPAPVYAPVE 174
Q+ A QP P P++
Sbjct 368 QRPKAGQTQPNPGILPIQ 385
Lambda K H a alpha
0.316 0.129 0.370 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 352093
Database: 82c8def3adc3852c52952bfd602c5449.SwissProt.fasta
Posted date: May 20, 2024 8:05 PM
Number of letters in database: 2,233
Number of sequences in database: 7
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
