BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 2de3f811f45f4d974a7ced62eff22294.SwissProt.fasta
20 sequences; 13,942 total letters
Query= ACIAD2307
Length=284
Score E
Sequences producing significant alignments: (Bits) Value
P05444 ClpA homolog protein [Fuscovulum blasticum] 52.4 2e-10
Q8MNV0 Spastin homolog [Caenorhabditis elegans] 48.9 2e-09
O74445 Probable 26S proteasome subunit rpt4 [Schizosaccharomyces ... 48.1 3e-09
B4NBP4 Spastin [Drosophila willistoni] 48.1 4e-09
Q72UP9 Lon protease [Leptospira interrogans serogroup Icterohaemo... 47.4 6e-09
A9GAW6 ATP-dependent zinc metalloprotease FtsH 3 [Sorangium cellu... 47.0 8e-09
B4PL32 Spastin [Drosophila yakuba] 46.6 1e-08
B4QSF0 Spastin [Drosophila simulans] 46.6 1e-08
B4HGG6 Spastin [Drosophila sechellia] 46.6 1e-08
B3P8A3 Spastin [Drosophila erecta] 46.6 1e-08
Q8I0P1 Spastin [Drosophila melanogaster] 46.6 1e-08
B7FSL4 Lon protease homolog, mitochondrial [Phaeodactylum tricorn... 46.2 2e-08
Q6PIW4 Fidgetin-like protein 1 [Homo sapiens] 45.4 3e-08
Q6GX84 Fidgetin-like protein 1 [Rattus norvegicus] 45.4 3e-08
Q8BPY9 Fidgetin-like protein 1 [Mus musculus] 45.4 3e-08
P72991 ATP-dependent zinc metalloprotease FtsH 3 [Synechocystis s... 44.7 4e-08
P37945 Lon protease 1 [Bacillus subtilis (strain 168)] 44.7 5e-08
P53549 26S proteasome subunit RPT4 [Saccharomyces cerevisiae (str... 43.9 7e-08
F3YDF1 ATP-dependent zinc metalloprotease YME1L [Drosophila melan... 43.9 8e-08
P0ABH9 ATP-dependent Clp protease ATP-binding subunit ClpA [Esche... 43.5 1e-07
>P05444 ClpA homolog protein [Fuscovulum blasticum]
Length=793
Score = 52.4 bits (124), Expect = 2e-10
Identities = 46/150 (31%), Positives = 72/150 (48%), Gaps = 19/150 (13%)
Query 19 SLKLAVKAARALQKPL---LVKGEPGTGKTLLAEQVADSLGLKLITWHIKSTTKAQQGLY 75
S+KLA R +KP+ L G G GKT +A+Q+A +LG++L+ + +
Sbjct 503 SIKLARAGLREPEKPIGNYLFTGPTGVGKTEVAKQLAATLGVELLRFDMSE-------YM 555
Query 76 EYDAVSRLRDSQLGDDRVYDIKNYIKPGKLWEAFTSEERCVLLIDEIDKADIEFPNDLLH 135
E AVSRL + G + + G L + CVLL+DEI+KA + N LL
Sbjct 556 EKHAVSRLIGAPPG------YVGFDQGGMLTDGVDQHPHCVLLLDEIEKAHPDVYNILLQ 609
Query 136 ELDKMSFFVYETGETITADQRPIVIITSNN 165
+D G + D R +++I ++N
Sbjct 610 VMDH-GKLTDHNGRAV--DFRNVILIMTSN 636
Score = 28.1 bits (61), Expect = 0.008
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query 22 LAVKAARALQKPLLVKGEPGTGKTLLAEQVA 52
+ V R PLLV G+PG GKT +AE +A
Sbjct 229 IQVLCRRRKNNPLLV-GDPGVGKTAIAEGLA 258
>Q8MNV0 Spastin homolog [Caenorhabditis elegans]
Length=512
Score = 48.9 bits (115), Expect = 2e-09
Identities = 53/178 (30%), Positives = 76/178 (43%), Gaps = 36/178 (20%)
Query 25 KAARALQKPLLVKGEPGTGKTLLAEQVADSLGLKLITWHIKSTTKAQQGLYEYDAVSRLR 84
K R K +L+ G PG GKTLLA+ VA +++Q + A
Sbjct 266 KGLRQPVKGILLFGPPGNGKTLLAKAVAG---------------ESKQMFFNISA----- 305
Query 85 DSQLGDDRVYDIKNYIKPGKLWEAFTSEERCVLLIDEID-------KADIEFPNDLLHEL 137
S L V D + I+ L++ + + ++ IDEID + D E +
Sbjct 306 -SSLTSKWVGDSEKTIRG--LFQIARNAQPSIIFIDEIDSILCERSEKDAEVSRRM---- 358
Query 138 DKMSFFVYETGETITADQRPIVIITSNNEKELPDAFLRRCFFH-YIEFPDEATMREII 194
K F V G T +AD R +VI +N EL DA LRR + PDE +E+I
Sbjct 359 -KTEFLVQFDGATSSADDRILVIGATNRPHELDDAVLRRFPKRIMLNLPDEEARKELI 415
>O74445 Probable 26S proteasome subunit rpt4 [Schizosaccharomyces
pombe (strain 972 / ATCC 24843)]
Length=388
Score = 48.1 bits (113), Expect = 3e-09
Identities = 52/187 (28%), Positives = 76/187 (41%), Gaps = 49/187 (26%)
Query 32 KPLLVKGEPGTGKTLLAEQVADSLGLKLITWHIKSTTKAQQGLYEYDAVSRLRDSQLGDD 91
K +L+ G PGTGKTLLA VA SLG+ + S + D +G+
Sbjct 167 KGVLLYGPPGTGKTLLARAVAASLGVNFLK----------------VVSSAIVDKYIGES 210
Query 92 R--VYDIKNYIKPGKLWEAFTSEERCVLLIDEID-----------KADIEFPNDLLHELD 138
+ ++ Y K E CV+ +DEID AD E L+ L+
Sbjct 211 ARIIREMFGYAK---------EHEPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 261
Query 139 KMSFFVYETGETITADQRPIVIITSNNEKELPDAFLRRCFFH---YIEFPDEATMREIIH 195
+M F Y G+T +I+ +N L A LR I P+E EI+
Sbjct 262 QMDGFDY-LGQT-------KIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILK 313
Query 196 VHFPRIS 202
+H ++S
Sbjct 314 IHLEKVS 320
Score = 22.3 bits (46), Expect = 0.51
Identities = 18/79 (23%), Positives = 36/79 (46%), Gaps = 6/79 (8%)
Query 14 YIATDSLKLAVKAARALQKPLLVKGEPGTGKTLLAEQVADSLG-LKLITWHIKSTTKAQQ 72
Y+ + +A L LL PG + + + +G ++++ H++ +K Q
Sbjct 268 YLGQTKIIMATNRPDTLDPALL---RPGRLDRKIEIPLPNEVGRMEILKIHLEKVSK--Q 322
Query 73 GLYEYDAVSRLRDSQLGDD 91
G +Y+A+ +L D G D
Sbjct 323 GEIDYEALVKLTDGTNGAD 341
>B4NBP4 Spastin [Drosophila willistoni]
Length=777
Score = 48.1 bits (113), Expect = 4e-09
Identities = 53/196 (27%), Positives = 81/196 (41%), Gaps = 29/196 (15%)
Query 28 RALQKPLLVKGEPGTGKTLLAEQVADSLGLKLITWHIKSTTKAQQGLYEYDAVSRLRDSQ 87
RA K LL+ G PG GKTLLA VA + S T G D +
Sbjct 532 RAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVG-----------DGE 580
Query 88 LGDDRVYDIKNYIKPGKLWEAFTSEERCVLLIDEIDKADIEFPNDLLHELD---KMSFFV 144
++ + +++P ++ IDE+D E ++ HE K F V
Sbjct 581 KLVRALFAVARHMQPS------------IIFIDEVDSLLSERSSN-EHEASRRLKTEFLV 627
Query 145 YETGETITAD-QRPIVIITSNNEKELPDAFLRRCFFH-YIEFPDEATMREIIHVHFPRIS 202
G D R +V+ +N +EL +A LRR Y+ PDE T +++ +
Sbjct 628 EFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLNRLLQKQG 687
Query 203 ATLVSEALQIFFKLRE 218
+ L +EAL+ K+ E
Sbjct 688 SPLDTEALRRLAKITE 703
>Q72UP9 Lon protease [Leptospira interrogans serogroup Icterohaemorrhagiae
serovar copenhageni (strain Fiocruz L1-130)]
Length=839
Score = 47.4 bits (111), Expect = 6e-09
Identities = 40/125 (32%), Positives = 58/125 (46%), Gaps = 25/125 (20%)
Query 22 LAVKAARALQKP--LLVKGEPGTGKTLLAEQVADSLGLKLITWHIKSTTKAQQGLYEYDA 79
LAVK + +K LL+ G PG GKT +A +A+++G K + + G+ +
Sbjct 359 LAVKKLKNDEKGTILLLVGPPGVGKTSIARSIAEAMGRKFFRFSV-------GGMRDEAE 411
Query 80 VSRLRDSQLGDDRVYDIKNYIKPGKLWEA--FTSEERCVLLIDEIDKADIEFPND----L 133
+ R + +G PGK+ A T E CV+L+DEIDK I D L
Sbjct 412 IKGHRRTYIGS----------MPGKIISALRITKERDCVILLDEIDKLSIGIQGDPASAL 461
Query 134 LHELD 138
L LD
Sbjct 462 LEVLD 466
Score = 20.8 bits (42), Expect = 1.7
Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 0/25 (0%)
Query 125 ADIEFPNDLLHELDKMSFFVYETGE 149
AD E ++ ELDK S+ TG+
Sbjct 284 ADPEVIEEVTRELDKFSYADPNTGD 308
>A9GAW6 ATP-dependent zinc metalloprotease FtsH 3 [Sorangium cellulosum
(strain So ce56)]
Length=602
Score = 47.0 bits (110), Expect = 8e-09
Identities = 51/180 (28%), Positives = 74/180 (41%), Gaps = 48/180 (27%)
Query 34 LLVKGEPGTGKTLLAEQVADSLGLKLITWHIKSTTKAQQGLYEYDAVSRLRDSQLGDDRV 93
+L+ GEPGTGKTLLA VA G++ ++ ++ + Q ++ SR+R
Sbjct 198 VLLTGEPGTGKTLLARAVACEAGVRFLS----ASGSSFQEMFVGVGASRVR--------- 244
Query 94 YDIKNYIKPGKLWEAFTSEERCVLLIDEI------------DKADIEFPNDLLHELDKMS 141
L+ C++ IDEI D A E L L +M
Sbjct 245 ----------ALFAEARKSAPCIVFIDEIDAVGRARAKGHGDSASAEHDQTLNQLLVEMD 294
Query 142 FFVYETGETITADQRPIVIITSNNEKELPD-AFLRRCFFH---YIEFPDEATMREIIHVH 197
F +ETG IV+I S N ++ D A LR F + PD EI++VH
Sbjct 295 GFDHETG---------IVVIASTNRADMLDPALLRPGRFDRKVTVPLPDVRGREEILNVH 345
>B4PL32 Spastin [Drosophila yakuba]
Length=758
Score = 46.6 bits (109), Expect = 1e-08
Identities = 51/196 (26%), Positives = 80/196 (41%), Gaps = 29/196 (15%)
Query 28 RALQKPLLVKGEPGTGKTLLAEQVADSLGLKLITWHIKSTTKAQQGLYEYDAVSRLRDSQ 87
RA K LL+ G PG GKTLLA VA + S T G D +
Sbjct 513 RAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVG-----------DGE 561
Query 88 LGDDRVYDIKNYIKPGKLWEAFTSEERCVLLIDEIDKADIEFPNDLLHELD---KMSFFV 144
++ + +++P ++ IDE+D + + HE K F V
Sbjct 562 KLVRALFAVARHMQPS------------IIFIDEVDSL-LSERSSSEHEASRRLKTEFLV 608
Query 145 YETGETITAD-QRPIVIITSNNEKELPDAFLRRCFFH-YIEFPDEATMREIIHVHFPRIS 202
G D R +V+ +N +EL +A LRR Y+ PDE T +++ +
Sbjct 609 EFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLNRLLQKQG 668
Query 203 ATLVSEALQIFFKLRE 218
+ L +EAL+ K+ +
Sbjct 669 SPLDTEALRRLAKITD 684
>B4QSF0 Spastin [Drosophila simulans]
Length=758
Score = 46.6 bits (109), Expect = 1e-08
Identities = 51/196 (26%), Positives = 80/196 (41%), Gaps = 29/196 (15%)
Query 28 RALQKPLLVKGEPGTGKTLLAEQVADSLGLKLITWHIKSTTKAQQGLYEYDAVSRLRDSQ 87
RA K LL+ G PG GKTLLA VA + S T G D +
Sbjct 513 RAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVG-----------DGE 561
Query 88 LGDDRVYDIKNYIKPGKLWEAFTSEERCVLLIDEIDKADIEFPNDLLHELD---KMSFFV 144
++ + +++P ++ IDE+D + + HE K F V
Sbjct 562 KLVRALFAVARHMQPS------------IIFIDEVDSL-LSERSSSEHEASRRLKTEFLV 608
Query 145 YETGETITAD-QRPIVIITSNNEKELPDAFLRRCFFH-YIEFPDEATMREIIHVHFPRIS 202
G D R +V+ +N +EL +A LRR Y+ PDE T +++ +
Sbjct 609 EFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLNRLLQKQG 668
Query 203 ATLVSEALQIFFKLRE 218
+ L +EAL+ K+ +
Sbjct 669 SPLDTEALRRLAKITD 684
>B4HGG6 Spastin [Drosophila sechellia]
Length=758
Score = 46.6 bits (109), Expect = 1e-08
Identities = 51/196 (26%), Positives = 80/196 (41%), Gaps = 29/196 (15%)
Query 28 RALQKPLLVKGEPGTGKTLLAEQVADSLGLKLITWHIKSTTKAQQGLYEYDAVSRLRDSQ 87
RA K LL+ G PG GKTLLA VA + S T G D +
Sbjct 513 RAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVG-----------DGE 561
Query 88 LGDDRVYDIKNYIKPGKLWEAFTSEERCVLLIDEIDKADIEFPNDLLHELD---KMSFFV 144
++ + +++P ++ IDE+D + + HE K F V
Sbjct 562 KLVRALFAVARHMQPS------------IIFIDEVDSL-LSERSSSEHEASRRLKTEFLV 608
Query 145 YETGETITAD-QRPIVIITSNNEKELPDAFLRRCFFH-YIEFPDEATMREIIHVHFPRIS 202
G D R +V+ +N +EL +A LRR Y+ PDE T +++ +
Sbjct 609 EFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLNRLLQKQG 668
Query 203 ATLVSEALQIFFKLRE 218
+ L +EAL+ K+ +
Sbjct 669 SPLDTEALRRLAKITD 684
>B3P8A3 Spastin [Drosophila erecta]
Length=758
Score = 46.6 bits (109), Expect = 1e-08
Identities = 51/196 (26%), Positives = 80/196 (41%), Gaps = 29/196 (15%)
Query 28 RALQKPLLVKGEPGTGKTLLAEQVADSLGLKLITWHIKSTTKAQQGLYEYDAVSRLRDSQ 87
RA K LL+ G PG GKTLLA VA + S T G D +
Sbjct 513 RAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVG-----------DGE 561
Query 88 LGDDRVYDIKNYIKPGKLWEAFTSEERCVLLIDEIDKADIEFPNDLLHELD---KMSFFV 144
++ + +++P ++ IDE+D + + HE K F V
Sbjct 562 KLVRALFAVARHMQPS------------IIFIDEVDSL-LSERSSSEHEASRRLKTEFLV 608
Query 145 YETGETITAD-QRPIVIITSNNEKELPDAFLRRCFFH-YIEFPDEATMREIIHVHFPRIS 202
G D R +V+ +N +EL +A LRR Y+ PDE T +++ +
Sbjct 609 EFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLNRLLQKQG 668
Query 203 ATLVSEALQIFFKLRE 218
+ L +EAL+ K+ +
Sbjct 669 SPLDTEALRRLAKITD 684
>Q8I0P1 Spastin [Drosophila melanogaster]
Length=758
Score = 46.6 bits (109), Expect = 1e-08
Identities = 51/196 (26%), Positives = 80/196 (41%), Gaps = 29/196 (15%)
Query 28 RALQKPLLVKGEPGTGKTLLAEQVADSLGLKLITWHIKSTTKAQQGLYEYDAVSRLRDSQ 87
RA K LL+ G PG GKTLLA VA + S T G D +
Sbjct 513 RAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVG-----------DGE 561
Query 88 LGDDRVYDIKNYIKPGKLWEAFTSEERCVLLIDEIDKADIEFPNDLLHELD---KMSFFV 144
++ + +++P ++ IDE+D + + HE K F V
Sbjct 562 KLVRALFAVARHMQPS------------IIFIDEVDSL-LSERSSSEHEASRRLKTEFLV 608
Query 145 YETGETITAD-QRPIVIITSNNEKELPDAFLRRCFFH-YIEFPDEATMREIIHVHFPRIS 202
G D R +V+ +N +EL +A LRR Y+ PDE T +++ +
Sbjct 609 EFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLNRLLQKQG 668
Query 203 ATLVSEALQIFFKLRE 218
+ L +EAL+ K+ +
Sbjct 669 SPLDTEALRRLAKITD 684
>B7FSL4 Lon protease homolog, mitochondrial [Phaeodactylum tricornutum
(strain CCAP 1055/1)]
Length=882
Score = 46.2 bits (108), Expect = 2e-08
Identities = 50/172 (29%), Positives = 75/172 (44%), Gaps = 30/172 (17%)
Query 13 QYIATDSLKLAVKAARALQKPLLVKGEPGTGKTLLAEQVADSLGLKLITWHIKSTTKAQQ 72
++IA L+ +V+ K L + G PGTGKT +A+ VAD+LG + + +
Sbjct 415 EFIAIGKLRGSVQG-----KILCLSGPPGTGKTSIAKSVADALGRQFFRFSV-------G 462
Query 73 GLYEYDAVSRLRDSQLGDDRVYDIKNYIKPGKLWEAF--TSEERCVLLIDEIDKADIEFP 130
GL + + R + +G PGKL + T V+LIDEIDK F
Sbjct 463 GLSDVSEIKGHRRTYIG----------AMPGKLIQCLKATGTTNPVVLIDEIDKLGTGFR 512
Query 131 ND----LLHELD--KMSFFVYETGETITADQRPIVIITSNNEKELPDAFLRR 176
D LL LD + S F + + + I T+N + +P L R
Sbjct 513 GDPASALLEVLDPGQNSTFRDYFLDVPVDISKVLFICTANELERIPGPLLDR 564
Score = 23.5 bits (49), Expect = 0.24
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 14/91 (15%)
Query 188 ATMREIIHVHFPRISATLVSEALQIFFKLREIPNLKKPPSTSELIDWLSLLMADDMPEDI 247
+T+RE+ V+ L E LQ +F +R N L D+ + + A PED+
Sbjct 210 STIREVAQVNM------LFRENLQ-YFPMRVDAN-----DPFRLADFAASISASGTPEDL 257
Query 248 LRNHDHKKAIPPLYGALI--KNEQDVQLLER 276
+ K A L+ AL+ E++V L++
Sbjct 258 QAVLEEKDAEMRLHKALVLLNREREVSKLQQ 288
>Q6PIW4 Fidgetin-like protein 1 [Homo sapiens]
Length=674
Score = 45.4 bits (106), Expect = 3e-08
Identities = 46/175 (26%), Positives = 70/175 (40%), Gaps = 36/175 (21%)
Query 28 RALQKPLLVKGEPGTGKTLLAEQVADSLGLKLITWHIKSTTKAQQGLYEYDAVSRLRDSQ 87
R K +L+ G PGTGKTL+ + +A G + S T G E
Sbjct 431 RGPPKGILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSKWVGEGE----------- 479
Query 88 LGDDRVYDIKNYIKPGKLWEAFTSEERC----VLLIDEIDKADIEFPNDLLHELD---KM 140
K+ A + RC V+ IDEID + D HE K
Sbjct 480 ----------------KMVRALFAVARCQQPAVIFIDEIDSL-LSQRGDGEHESSRRIKT 522
Query 141 SFFVYETGETITADQRPIVIITSNNEKELPDAFLRRCFFH-YIEFPDEATMREII 194
F V G T +++ R +V+ +N +E+ +A RR YI P+ + ++I+
Sbjct 523 EFLVQLDGATTSSEDRILVVGATNRPQEIDEAARRRLVKRLYIPLPEASARKQIV 577
>Q6GX84 Fidgetin-like protein 1 [Rattus norvegicus]
Length=677
Score = 45.4 bits (106), Expect = 3e-08
Identities = 46/175 (26%), Positives = 70/175 (40%), Gaps = 36/175 (21%)
Query 28 RALQKPLLVKGEPGTGKTLLAEQVADSLGLKLITWHIKSTTKAQQGLYEYDAVSRLRDSQ 87
R K +L+ G PGTGKTL+ + +A G + S T G E
Sbjct 434 RGPPKGILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSKWVGEGE----------- 482
Query 88 LGDDRVYDIKNYIKPGKLWEAFTSEERC----VLLIDEIDKADIEFPNDLLHELD---KM 140
K+ A + RC V+ IDEID + D HE K
Sbjct 483 ----------------KMVRALFAVARCQQPAVIFIDEIDSL-LSQRGDGEHESSRRIKT 525
Query 141 SFFVYETGETITADQRPIVIITSNNEKELPDAFLRRCFFH-YIEFPDEATMREII 194
F V G T +++ R +V+ +N +E+ +A RR YI P+ + ++I+
Sbjct 526 EFLVQLDGATTSSEDRILVVGATNRPQEIDEAARRRLVKRLYIPLPEASARKQIV 580
>Q8BPY9 Fidgetin-like protein 1 [Mus musculus]
Length=683
Score = 45.4 bits (106), Expect = 3e-08
Identities = 46/175 (26%), Positives = 70/175 (40%), Gaps = 36/175 (21%)
Query 28 RALQKPLLVKGEPGTGKTLLAEQVADSLGLKLITWHIKSTTKAQQGLYEYDAVSRLRDSQ 87
R K +L+ G PGTGKTL+ + +A G + S T G E
Sbjct 440 RGPPKGILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSKWVGEGE----------- 488
Query 88 LGDDRVYDIKNYIKPGKLWEAFTSEERC----VLLIDEIDKADIEFPNDLLHELD---KM 140
K+ A + RC V+ IDEID + D HE K
Sbjct 489 ----------------KMVRALFAVARCQQPAVIFIDEIDSL-LSQRGDGEHESSRRIKT 531
Query 141 SFFVYETGETITADQRPIVIITSNNEKELPDAFLRRCFFH-YIEFPDEATMREII 194
F V G T +++ R +V+ +N +E+ +A RR YI P+ + ++I+
Sbjct 532 EFLVQLDGATTSSEDRILVVGATNRPQEIDEAARRRLVKRLYIPLPEASARKQIV 586
>P72991 ATP-dependent zinc metalloprotease FtsH 3 [Synechocystis
sp. (strain PCC 6803 / Kazusa)]
Length=616
Score = 44.7 bits (104), Expect = 4e-08
Identities = 51/183 (28%), Positives = 76/183 (42%), Gaps = 47/183 (26%)
Query 30 LQKPLLVKGEPGTGKTLLAEQVADSLGLKLITWHIKSTTKAQQGLYEYDAVSRLRDSQLG 89
+ K +L+ G PGTGKTLLA+ VA G+ + + G+ SR+RD
Sbjct 193 IPKGVLLVGPPGTGKTLLAKAVAGEAGVPFFSISGSEFVEMFVGV----GASRVRD---- 244
Query 90 DDRVYDIKNYIKPGKLWEAFTSEERCVLLIDEIDK------ADIEFPND-----LLHELD 138
L+E + C++ IDEID A + ND L L
Sbjct 245 ---------------LFEQAKANAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLT 289
Query 139 KMSFFVYETGETITADQRPIVIITSNNEKELPDAFLRRCFFH----YIEFPDEATMREII 194
+M F TG I+I+ + N ++ D+ L R ++ PD A REI+
Sbjct 290 EMDGFEGNTG---------IIIVAATNRPDVLDSALMRPGRFDRQVVVDRPDYAGRREIL 340
Query 195 HVH 197
+VH
Sbjct 341 NVH 343
Score = 18.9 bits (37), Expect = 6.6
Identities = 6/16 (38%), Positives = 9/16 (56%), Gaps = 0/16 (0%)
Query 60 ITWHIKSTTKAQQGLY 75
+TW S + + GLY
Sbjct 454 LTWFTPSEDRMESGLY 469
>P37945 Lon protease 1 [Bacillus subtilis (strain 168)]
Length=774
Score = 44.7 bits (104), Expect = 5e-08
Identities = 52/181 (29%), Positives = 76/181 (42%), Gaps = 24/181 (13%)
Query 25 KAARALQKPLL-VKGEPGTGKTLLAEQVADSLGLKLITWHIKSTTKAQQGLYEYDAVSRL 83
K ++L+ P+L + G PG GKT LA+ +A SLG K + + G+ + +
Sbjct 340 KLTKSLKGPILCLAGPPGVGKTSLAKSIAKSLGRKFVRISL-------GGVRDESEIRGH 392
Query 84 RDSQLGDDRVYDIKNYIKPGKLWEAFTSEERCVLLIDEIDKADIEFPND----LLHELD- 138
R + +G I+ K GKL V L+DEIDK +F D +L LD
Sbjct 393 RRTYVGAMPGRIIQGMKKAGKL--------NPVFLLDEIDKMSSDFRGDPSSAMLEVLDP 444
Query 139 --KMSFFVYETGETITADQRPIVIITSNNEKELPDAFLRRCFFHYIEFPDEATMREIIHV 196
SF + ET + + I T+NN +P R I E EI+
Sbjct 445 EQNSSFSDHYIEETFDL-SKVLFIATANNLATIPGPLRDRMEIINIAGYTEIEKLEIVKD 503
Query 197 H 197
H
Sbjct 504 H 504
Score = 21.2 bits (43), Expect = 1.3
Identities = 20/70 (29%), Positives = 33/70 (47%), Gaps = 9/70 (13%)
Query 216 LREIPNLKKPPSTS-------ELIDWLSLLMADDMPEDILRNHDHKKAIPPLYGALIKNE 268
L+E+ +K PS+S IDWL L D +D L + + + + L K +
Sbjct 270 LKELNRYEKIPSSSAESSVIRNYIDWLVALPWTDETDDKLDLKEAGRLLDEEHHGLEKVK 329
Query 269 QDVQLLERLA 278
+ ++LE LA
Sbjct 330 E--RILEYLA 337
>P53549 26S proteasome subunit RPT4 [Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)]
Length=437
Score = 43.9 bits (102), Expect = 7e-08
Identities = 49/189 (26%), Positives = 75/189 (40%), Gaps = 49/189 (26%)
Query 32 KPLLVKGEPGTGKTLLAEQVADSLGLKLITWHIKSTTKAQQGLYEYDAVSRLRDSQLGDD 91
K +L+ G PGTGKTLLA+ VA ++G I + S + D +G+
Sbjct 216 KGVLLYGPPGTGKTLLAKAVAATIGANFI----------------FSPASGIVDKYIGES 259
Query 92 R--VYDIKNYIKPGKLWEAFTSEERCVLLIDEID-----------KADIEFPNDLLHELD 138
+ ++ Y K E C++ +DE+D AD E L+ L
Sbjct 260 ARIIREMFAYAK---------EHEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLT 310
Query 139 KMSFFVYETGETITADQRPIVIITSNNEKELPDAFLRRCFFH---YIEFPDEATMREIIH 195
+M F G+T +I+ +N L A LR I P+EA EI
Sbjct 311 QMDGF-DNLGQT-------KIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFK 362
Query 196 VHFPRISAT 204
+H ++ T
Sbjct 363 IHTAKVKKT 371
>F3YDF1 ATP-dependent zinc metalloprotease YME1L [Drosophila melanogaster]
Length=740
Score = 43.9 bits (102), Expect = 8e-08
Identities = 53/184 (29%), Positives = 74/184 (40%), Gaps = 43/184 (23%)
Query 30 LQKPLLVKGEPGTGKTLLAEQVADSLGLKLITWHIKSTTKAQQGLYEYDAVSRLRDSQLG 89
L K +L+ G PGTGKTLLA VA K+ +H E+D V G
Sbjct 336 LPKGVLLVGPPGTGKTLLARAVAGE--AKVPFFHAAGP--------EFDEVL----VGQG 381
Query 90 DDRVYDIKNYIKPGKLWEAFTSEERCVLLIDEIDKADIEFPNDLLHE---------LDKM 140
RV D L++A + CV+ IDEID + N +LH L +M
Sbjct 382 ARRVRD---------LFKAAKARAPCVIFIDEIDSVGAKRTNSVLHPYANQTINQLLSEM 432
Query 141 SFFVYETGETITADQRPIVIITSNNEKELPDAFLRRCFFH---YIEFPDEATMREIIHVH 197
F G IV+ +N +L A LR F + PD +EI+ ++
Sbjct 433 DGFHQNAG--------VIVLGATNRRDDLDQALLRPGRFDVEVMVSTPDFTGRKEILSLY 484
Query 198 FPRI 201
+I
Sbjct 485 LTKI 488
>P0ABH9 ATP-dependent Clp protease ATP-binding subunit ClpA [Escherichia
coli (strain K12)]
Length=758
Score = 43.5 bits (101), Expect = 1e-07
Identities = 45/157 (29%), Positives = 71/157 (45%), Gaps = 23/157 (15%)
Query 16 ATDSLKLAVKAARA----LQKPL---LVKGEPGTGKTLLAEQVADSLGLKLITWHIKSTT 68
A ++L A+K ARA KP+ L G G GKT + Q++ +LG++L+ + +
Sbjct 466 AIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSE-- 523
Query 69 KAQQGLYEYDAVSRLRDSQLGDDRVYDIKNYIKPGKLWEAFTSEERCVLLIDEIDKADIE 128
E VSRL + G + + G L +A VLL+DEI+KA +
Sbjct 524 -----YMERHTVSRLIGAPPG------YVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPD 572
Query 129 FPNDLLHELDKMSFFVYETGETITADQRPIVIITSNN 165
N LL +D + AD R +V++ + N
Sbjct 573 VFNILLQVMDNGTL---TDNNGRKADFRNVVLVMTTN 606
Score = 26.2 bits (56), Expect = 0.034
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query 22 LAVKAARALQKPLLVKGEPGTGKTLLAEQVA 52
+ V R PLLV GE G GKT +AE +A
Sbjct 199 IQVLCRRRKNNPLLV-GESGVGKTAIAEGLA 228
Lambda K H a alpha
0.322 0.138 0.405 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 2975742
Database: 2de3f811f45f4d974a7ced62eff22294.SwissProt.fasta
Posted date: May 20, 2024 4:12 PM
Number of letters in database: 13,942
Number of sequences in database: 20
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
