BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 3e8689b337812070a5a04708747b937e.SwissProt.fasta
           1 sequences; 132 total letters



Query= ACIAD2320

Length=210
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

P09996 Uncharacterized protein YidB [Escherichia coli (strain K12)]   73.6    8e-22


>P09996 Uncharacterized protein YidB [Escherichia coli (strain 
K12)]
Length=132

 Score = 73.6 bits (179),  Expect = 8e-22
 Identities = 40/111 (36%), Positives = 65/111 (59%), Gaps = 2/111 (2%)

Query  97   ILAWIQKQGGLQGALDKLKNSGLGTQVQSWVDPQQSNDHNVSTAEVEQLFDENEVEQVAQ  156
            IL+W+++QGG+Q  L+KL++ GLG  + +W+  QQ N  +VS  ++E     N V  + Q
Sbjct  22   ILSWVEEQGGIQVLLEKLQSGGLGAILSTWLSNQQGN-QSVSGEQLESALGTNAVSDLGQ  80

Query  157  QTQVPKQDVYGAISSVLPQIINALTPQGEKTNPQEANQDIQNVLNLVSGFL  207
            +  V        ++  LP+II+AL+PQGE  +PQ  N  +   + L+ G L
Sbjct  81   KLGVDTSTASSLLAEQLPKIIDALSPQGE-VSPQANNDLLSAGMELLKGKL  130


 Score = 20.0 bits (40),  Expect = 0.013
 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query  29  GILGSVLGQLGANQQPQNQGNTQNTDRGLGGILGSVLSQ-FGAGTASSNT  77
           G LG++L    +NQQ     + +  +  LG    S L Q  G  T+++++
Sbjct  42  GGLGAILSTWLSNQQGNQSVSGEQLESALGTNAVSDLGQKLGVDTSTASS  91



Lambda      K        H        a         alpha
   0.311    0.129    0.354    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 21888


  Database: 3e8689b337812070a5a04708747b937e.SwissProt.fasta
    Posted date:  May 20, 2024  10:33 PM
  Number of letters in database: 132
  Number of sequences in database:  1



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40