BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 42e4c6f03227f98fad16bbf4e9eed02c.SwissProt.fasta
15 sequences; 5,836 total letters
Query= ACIAD2324
Length=397
Score E
Sequences producing significant alignments: (Bits) Value
Q6FA07 Lipid-A-disaccharide synthase [Acinetobacter baylyi (strai... 776 0.0
Q085C9 Lipid-A-disaccharide synthase [Shewanella frigidimarina (s... 310 2e-106
Q2SBR1 Lipid-A-disaccharide synthase [Hahella chejuensis (strain ... 310 2e-106
C3LQ19 Lipid-A-disaccharide synthase [Vibrio cholerae serotype O1... 309 3e-106
Q9KPW5 Lipid-A-disaccharide synthase [Vibrio cholerae serotype O1... 309 3e-106
A5F627 Lipid-A-disaccharide synthase [Vibrio cholerae serotype O1... 309 3e-106
A1SYV0 Lipid-A-disaccharide synthase [Psychromonas ingrahamii (st... 309 4e-106
Q5E3F2 Lipid-A-disaccharide synthase [Aliivibrio fischeri (strain... 308 8e-106
B5F9W3 Lipid-A-disaccharide synthase [Aliivibrio fischeri (strain... 306 3e-105
Q21HI5 Lipid-A-disaccharide synthase [Saccharophagus degradans (s... 306 4e-105
A7MY02 Lipid-A-disaccharide synthase [Vibrio campbellii (strain A... 305 8e-105
Q87MF0 Lipid-A-disaccharide synthase [Vibrio parahaemolyticus ser... 304 2e-104
P10441 Lipid-A-disaccharide synthase [Escherichia coli (strain K12)] 297 1e-101
P45011 Lipid-A-disaccharide synthase [Haemophilus influenzae (str... 287 1e-97
F4IF99 Probable lipid-A-disaccharide synthase, mitochondrial [Ara... 169 3e-51
>Q6FA07 Lipid-A-disaccharide synthase [Acinetobacter baylyi (strain
ATCC 33305 / BD413 / ADP1)]
Length=396
Score = 776 bits (2005), Expect = 0.0
Identities = 395/396 (99%), Positives = 396/396 (100%), Gaps = 0/396 (0%)
Query 1 LYGTCHLSTHKLKIGIVVGEVSGDTLGVQLMRSFREQGIDAEFEGIGGPQMIAEGFNSFY 60
+YGTCHLSTHKLKIGIVVGEVSGDTLGVQLMRSFREQGIDAEFEGIGGPQMIAEGFNSFY
Sbjct 1 MYGTCHLSTHKLKIGIVVGEVSGDTLGVQLMRSFREQGIDAEFEGIGGPQMIAEGFNSFY 60
Query 61 PMETLSVMGIVEVLKDIKKLFAVRDGLVQRWREHPVDVFVGIDAPDFNLRLSKSLKEKNL 120
PMETLSVMGIVEVLKDIKKLFAVRDGLVQRWREHPVDVFVGIDAPDFNLRLSKSLKEKNL
Sbjct 61 PMETLSVMGIVEVLKDIKKLFAVRDGLVQRWREHPVDVFVGIDAPDFNLRLSKSLKEKNL 120
Query 121 PIRTVQYVSPSVWAWRQGRVKGIKATIDLVLCLFPFEKNFYEQHSVRAAFVGHPLAKLLP 180
PIRTVQYVSPSVWAWRQGRVKGIKATIDLVLCLFPFEKNFYEQHSVRAAFVGHPLAKLLP
Sbjct 121 PIRTVQYVSPSVWAWRQGRVKGIKATIDLVLCLFPFEKNFYEQHSVRAAFVGHPLAKLLP 180
Query 181 LNNSLVEAKQALGLNPEKTYIALLPGSRKGEVERLLPMLLGSAEILLKKYPDVEYLIPAI 240
LNNSLVEAKQALGLNPEKTYIALLPGSRKGEVERLLPMLLGSAEILLKKYPDVEYLIPAI
Sbjct 181 LNNSLVEAKQALGLNPEKTYIALLPGSRKGEVERLLPMLLGSAEILLKKYPDVEYLIPAI 240
Query 241 SDVRKKQIQDGIQSIAPQYAQKLHVLENQDQESKIGRQVMNASDIVALASGTATLEAMLL 300
SDVRKKQIQDGIQSIAPQYAQKLHVLENQDQESKIGRQVMNASDIVALASGTATLEAMLL
Sbjct 241 SDVRKKQIQDGIQSIAPQYAQKLHVLENQDQESKIGRQVMNASDIVALASGTATLEAMLL 300
Query 301 HRPMVSFYKLNTLTYIIAKLLVKIQYYSLPNIIAGKKVIEELIQKDANPERLAHEIEKLM 360
HRPMVSFYKLNTLTYIIAKLLVKIQYYSLPNIIAGKKVIEELIQKDANPERLAHEIEKLM
Sbjct 301 HRPMVSFYKLNTLTYIIAKLLVKIQYYSLPNIIAGKKVIEELIQKDANPERLAHEIEKLM 360
Query 361 NNETAKIQMMQHFSMHKQLISGNTEDPVQAIMTLIQ 396
NNETAKIQMMQHFSMHKQLISGNTEDPVQAIMTLIQ
Sbjct 361 NNETAKIQMMQHFSMHKQLISGNTEDPVQAIMTLIQ 396
>Q085C9 Lipid-A-disaccharide synthase [Shewanella frigidimarina
(strain NCIMB 400)]
Length=382
Score = 310 bits (793), Expect = 2e-106
Identities = 163/381 (43%), Positives = 247/381 (65%), Gaps = 11/381 (3%)
Query 16 IVVGEVSGDTLGVQLMRSFREQGIDAEFEGIGGPQMIAEGFNSFYPMETLSVMGIVEVLK 75
IV GE+SGD LG L+ S +++ DA F GIGGP+M A GF S +PME LS+MG+VEVL
Sbjct 11 IVAGEISGDILGAGLVNSLKKRYPDARFIGIGGPRMQALGFESLFPMEELSIMGLVEVLS 70
Query 76 DIKKLFAVRDGLVQRWREHPVDVFVGIDAPDFNLRLSKSLKEKNLPIRTVQYVSPSVWAW 135
+ +L +R LV++ E D F+GIDAPDFN+ + LK K I+TV YVSPSVWAW
Sbjct 71 HLPRLLHIRSSLVKQITELAPDCFIGIDAPDFNIGVELKLKAKG--IKTVHYVSPSVWAW 128
Query 136 RQGRVKGIKATIDLVLCLFPFEKNFYEQHSVRAAFVGHPLAKLLPLNNSLVEAKQALGLN 195
R R+ I ++VL L PFEK FY+QH V FVGH LA +P+++ + A+Q LGL+
Sbjct 129 RPKRIFKIAKATNMVLSLLPFEKAFYDQHQVPCTFVGHTLADDIPMHSDKLAARQLLGLD 188
Query 196 PEKTYIALLPGSRKGEVERLLPMLLGSAEILLKKYPDVEYLIPAISDVRKKQIQDGIQSI 255
P Y+A+LPGSR GE+++L + +A+++ + +PD++++ P ++D R++Q ++
Sbjct 189 PNAEYLAVLPGSRGGELKQLAEPFVKAAQLVKQTFPDIKFVTPVVNDARRQQFLAALEEF 248
Query 256 APQYAQKLHVLENQDQESKIGRQVMNASDIVALASGTATLEAMLLHRPMVSFYKLNTLTY 315
AP ++ ++E Q R+VM A+D + LASGTATLEAML+ RPMV Y+++ +TY
Sbjct 249 APDL--EVTIVEGQ------SREVMAAADCILLASGTATLEAMLVKRPMVVSYRVSPITY 300
Query 316 IIAKLLVKIQYYSLPNIIAGKKVIEELIQKDANPERLAHEIEKLMNNETAKIQMMQHFSM 375
IA ++KI+ YSLPN++A ++ EL+Q + P+ +A I K +N + A + + +
Sbjct 301 AIAIKMMKIKNYSLPNLLANDTIVPELMQANCQPQLIADAIIKQLNQDFAPLN-TRFEEL 359
Query 376 HKQLISGNTEDPVQAIMTLIQ 396
H+ L +E A++ L+Q
Sbjct 360 HQLLKCNASERAADAVVALLQ 380
>Q2SBR1 Lipid-A-disaccharide synthase [Hahella chejuensis (strain
KCTC 2396)]
Length=396
Score = 310 bits (794), Expect = 2e-106
Identities = 173/390 (44%), Positives = 241/390 (62%), Gaps = 10/390 (3%)
Query 7 LSTHKLKIGIVVGEVSGDTLGVQLMRSFREQGIDAEFEGIGGPQMIAEGFNSFYPMETLS 66
+S ++IGIV GE SGD LG LM+ + A FEGIGG +M+ EGFN+F+ ME LS
Sbjct 4 ISERPIRIGIVAGEASGDLLGAGLMQEIKALYPQATFEGIGGERMLKEGFNTFFQMERLS 63
Query 67 VMGIVEVLKDIKKLFAVRDGLVQRWREHPVDVFVGIDAPDFNLRLSKSLKEKNLPIRTVQ 126
+MG+VEVL + +L A+R +V + P D+F+GID+PDF + + L++ I+T
Sbjct 64 IMGLVEVLGRLPELLAMRRRIVDHFTATPPDLFLGIDSPDFTIGIELKLRQAG--IKTAH 121
Query 127 YVSPSVWAWRQGRVKGIKATIDLVLCLFPFEKNFYEQHSVRAAFVGHPLAKLLPLNNSLV 186
YVSPSVWAWRQ RV I +DL+L L PFE FY +H+V FVGHPLA+++PL+ V
Sbjct 122 YVSPSVWAWRQNRVFKIAKAVDLMLTLLPFEARFYREHNVPVKFVGHPLAEIIPLHPDKV 181
Query 187 EAKQALGLNPEKTYIALLPGSRKGEVERLLPMLLGSAEILLKKYPDVEYLIPAISDVRKK 246
+ LG++ IA+LPGSR GEV RL P + + L ++ PDV ++IPA + RK
Sbjct 182 AMRHELGIDASGEVIAVLPGSRGGEVSRLGPTFIETIAWLHQRRPDVRFVIPAANQARKT 241
Query 247 QIQDGIQSIAPQYAQKLHVLENQDQESKIGRQVMNASDIVALASGTATLEAMLLHRPMVS 306
QI+ +QS + L DQ S R+ M A+D + LASGTATLEAML+ RPMV
Sbjct 242 QIEQQLQSHGGRLPVTL-----IDQHS---RECMMAADAILLASGTATLEAMLVKRPMVV 293
Query 307 FYKLNTLTYIIAKLLVKIQYYSLPNIIAGKKVIEELIQKDANPERLAHEIEKLMNNETAK 366
YKL TL+Y I + L+K +Y SLPN++A K ++ ELIQ DA P +L + K +N E +
Sbjct 294 AYKLATLSYWIMRRLLKAKYISLPNLLADKALVPELIQNDATPAKLGEALLKELNVERRR 353
Query 367 IQMMQHFSMHKQLISGNTEDPVQAIMTLIQ 396
+ +HK + + QA+ LI+
Sbjct 354 SLEDEFEGLHKLIRQNASVAAAQAVAELIE 383
>C3LQ19 Lipid-A-disaccharide synthase [Vibrio cholerae serotype
O1 (strain M66-2)]
Length=379
Score = 309 bits (792), Expect = 3e-106
Identities = 168/385 (44%), Positives = 243/385 (63%), Gaps = 11/385 (3%)
Query 12 LKIGIVVGEVSGDTLGVQLMRSFREQGIDAEFEGIGGPQMIAEGFNSFYPMETLSVMGIV 71
L+IGIVVGE+SGDTLG +++ R + DAEF GIGGP+M A G S + ME L+VMG+V
Sbjct 5 LRIGIVVGELSGDTLGEGFIKAIRARYPDAEFVGIGGPKMNALGCQSLFDMEELAVMGLV 64
Query 72 EVLKDIKKLFAVRDGLVQRWREHPVDVFVGIDAPDFNLRLSKSLKEKNLPIRTVQYVSPS 131
EVL + +L V+ LV+ + +P DVFVGIDAPDFNLRL SLK+ I+TV YVSPS
Sbjct 65 EVLGRLPRLLKVKAELVKYFTANPPDVFVGIDAPDFNLRLELSLKQAG--IKTVHYVSPS 122
Query 132 VWAWRQGRVKGIKATIDLVLCLFPFEKNFYEQHSVRAAFVGHPLAKLLPLNNSLVEAKQA 191
VWAWRQ R+ GI A LVL PFEK FY++ +V F+GH LA +PL + + A+Q
Sbjct 123 VWAWRQNRIHGIAAATHLVLAFLPFEKAFYDKFNVPCEFIGHTLADSIPLASDKLAARQL 182
Query 192 LGLNPEKTYIALLPGSRKGEVERLLPMLLGSAEILLKKYPDVEYLIPAISDVRKKQIQDG 251
LGL+ ++ ++A+LPGSR E++ L + + + L +YPD+ +++ ++ R+ Q +
Sbjct 183 LGLDEQRRWLAVLPGSRGSEMKMLAEPFIATCQKLQARYPDLGFVVALVNAKRRAQFEQA 242
Query 252 IQSIAPQYAQKLHVLENQDQESKIGRQVMNASDIVALASGTATLEAMLLHRPMVSFYKLN 311
Q +AP+ N R V+ A+D V LASGT LE MLL RPMV Y++N
Sbjct 243 WQQVAPEL--------NFVLVDDTARNVITAADAVMLASGTVALECMLLKRPMVVGYRVN 294
Query 312 TLTYIIAKLLVKIQYYSLPNIIAGKKVIEELIQKDANPERLAHEIEKLMNNETAKIQMMQ 371
T +AK L+K Y SLPNI+AG+++++EL+Q + L HE+ +L+ ++ + M +
Sbjct 295 AFTAFLAKRLLKTPYVSLPNILAGEELVKELLQDHCTVDNLYHEVSRLLESDNQAL-MDK 353
Query 372 HFSMHKQLISGNTEDPVQAIMTLIQ 396
MH+ + + QA++ LIQ
Sbjct 354 FTEMHQWIRKDADQQAAQAVLHLIQ 378
>Q9KPW5 Lipid-A-disaccharide synthase [Vibrio cholerae serotype
O1 (strain ATCC 39315 / El Tor Inaba N16961)]
Length=379
Score = 309 bits (792), Expect = 3e-106
Identities = 168/385 (44%), Positives = 243/385 (63%), Gaps = 11/385 (3%)
Query 12 LKIGIVVGEVSGDTLGVQLMRSFREQGIDAEFEGIGGPQMIAEGFNSFYPMETLSVMGIV 71
L+IGIVVGE+SGDTLG +++ R + DAEF GIGGP+M A G S + ME L+VMG+V
Sbjct 5 LRIGIVVGELSGDTLGEGFIKAIRARYPDAEFVGIGGPKMNALGCQSLFDMEELAVMGLV 64
Query 72 EVLKDIKKLFAVRDGLVQRWREHPVDVFVGIDAPDFNLRLSKSLKEKNLPIRTVQYVSPS 131
EVL + +L V+ LV+ + +P DVFVGIDAPDFNLRL SLK+ I+TV YVSPS
Sbjct 65 EVLGRLPRLLKVKAELVKYFTANPPDVFVGIDAPDFNLRLELSLKQAG--IKTVHYVSPS 122
Query 132 VWAWRQGRVKGIKATIDLVLCLFPFEKNFYEQHSVRAAFVGHPLAKLLPLNNSLVEAKQA 191
VWAWRQ R+ GI A LVL PFEK FY++ +V F+GH LA +PL + + A+Q
Sbjct 123 VWAWRQNRIHGIAAATHLVLAFLPFEKAFYDKFNVPCEFIGHTLADSIPLASDKLAARQL 182
Query 192 LGLNPEKTYIALLPGSRKGEVERLLPMLLGSAEILLKKYPDVEYLIPAISDVRKKQIQDG 251
LGL+ ++ ++A+LPGSR E++ L + + + L +YPD+ +++ ++ R+ Q +
Sbjct 183 LGLDEQRRWLAVLPGSRGSEMKMLAEPFIATCQKLQARYPDLGFVVALVNAKRRAQFEQA 242
Query 252 IQSIAPQYAQKLHVLENQDQESKIGRQVMNASDIVALASGTATLEAMLLHRPMVSFYKLN 311
Q +AP+ N R V+ A+D V LASGT LE MLL RPMV Y++N
Sbjct 243 WQQVAPEL--------NFVLVDDTARNVITAADAVMLASGTVALECMLLKRPMVVGYRVN 294
Query 312 TLTYIIAKLLVKIQYYSLPNIIAGKKVIEELIQKDANPERLAHEIEKLMNNETAKIQMMQ 371
T +AK L+K Y SLPNI+AG+++++EL+Q + L HE+ +L+ ++ + M +
Sbjct 295 AFTAFLAKRLLKTPYVSLPNILAGEELVKELLQDHCTVDNLYHEVSRLLESDNQAL-MDK 353
Query 372 HFSMHKQLISGNTEDPVQAIMTLIQ 396
MH+ + + QA++ LIQ
Sbjct 354 FTEMHQWIRKDADQQAAQAVLHLIQ 378
>A5F627 Lipid-A-disaccharide synthase [Vibrio cholerae serotype
O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)]
Length=379
Score = 309 bits (792), Expect = 3e-106
Identities = 168/385 (44%), Positives = 243/385 (63%), Gaps = 11/385 (3%)
Query 12 LKIGIVVGEVSGDTLGVQLMRSFREQGIDAEFEGIGGPQMIAEGFNSFYPMETLSVMGIV 71
L+IGIVVGE+SGDTLG +++ R + DAEF GIGGP+M A G S + ME L+VMG+V
Sbjct 5 LRIGIVVGELSGDTLGEGFIKAIRARYPDAEFVGIGGPKMNALGCQSLFDMEELAVMGLV 64
Query 72 EVLKDIKKLFAVRDGLVQRWREHPVDVFVGIDAPDFNLRLSKSLKEKNLPIRTVQYVSPS 131
EVL + +L V+ LV+ + +P DVFVGIDAPDFNLRL SLK+ I+TV YVSPS
Sbjct 65 EVLGRLPRLLKVKAELVKYFTANPPDVFVGIDAPDFNLRLELSLKQAG--IKTVHYVSPS 122
Query 132 VWAWRQGRVKGIKATIDLVLCLFPFEKNFYEQHSVRAAFVGHPLAKLLPLNNSLVEAKQA 191
VWAWRQ R+ GI A LVL PFEK FY++ +V F+GH LA +PL + + A+Q
Sbjct 123 VWAWRQNRIHGIAAATHLVLAFLPFEKAFYDKFNVPCEFIGHTLADSIPLASDKLAARQL 182
Query 192 LGLNPEKTYIALLPGSRKGEVERLLPMLLGSAEILLKKYPDVEYLIPAISDVRKKQIQDG 251
LGL+ ++ ++A+LPGSR E++ L + + + L +YPD+ +++ ++ R+ Q +
Sbjct 183 LGLDEQRRWLAVLPGSRGSEMKMLAEPFIATCQKLQARYPDLGFVVALVNAKRRAQFEQA 242
Query 252 IQSIAPQYAQKLHVLENQDQESKIGRQVMNASDIVALASGTATLEAMLLHRPMVSFYKLN 311
Q +AP+ N R V+ A+D V LASGT LE MLL RPMV Y++N
Sbjct 243 WQQVAPEL--------NFVLVDDTARNVITAADAVMLASGTVALECMLLKRPMVVGYRVN 294
Query 312 TLTYIIAKLLVKIQYYSLPNIIAGKKVIEELIQKDANPERLAHEIEKLMNNETAKIQMMQ 371
T +AK L+K Y SLPNI+AG+++++EL+Q + L HE+ +L+ ++ + M +
Sbjct 295 AFTAFLAKRLLKTPYVSLPNILAGEELVKELLQDHCTVDNLYHEVSRLLESDNQAL-MDK 353
Query 372 HFSMHKQLISGNTEDPVQAIMTLIQ 396
MH+ + + QA++ LIQ
Sbjct 354 FTEMHQWIRKDADQQAAQAVLHLIQ 378
>A1SYV0 Lipid-A-disaccharide synthase [Psychromonas ingrahamii
(strain DSM 17664 / CCUG 51855 / 37)]
Length=381
Score = 309 bits (791), Expect = 4e-106
Identities = 165/385 (43%), Positives = 241/385 (63%), Gaps = 13/385 (3%)
Query 12 LKIGIVVGEVSGDTLGVQLMRSFREQGIDAEFEGIGGPQMIAEGFNSFYPMETLSVMGIV 71
L+IG++ GE SGD LG L+++ + DA FEGI GP+MIA+G + +P+E LSVMG V
Sbjct 5 LRIGLIAGEASGDILGEGLIKALKIHYPDAVFEGIAGPKMIAQGCTALHPLEALSVMGFV 64
Query 72 EVLKDIKKLFAVRDGLVQRWREHPVDVFVGIDAPDFNLRLSKSLKEKNLPIRTVQYVSPS 131
EVL + + +R ++ + +P D+F+GIDAPDFNL + LK+ N I+T+ YVSPS
Sbjct 65 EVLGKLGSILRIRKSIINHFIANPPDIFIGIDAPDFNLTVELKLKQHN--IKTIHYVSPS 122
Query 132 VWAWRQGRVKGIKATIDLVLCLFPFEKNFYEQHSVRAAFVGHPLAKLLPLNNSLVEAKQA 191
VWAW+Q R+ I DLVL PFEK FY++ V F+GH LA LPL +A+Q+
Sbjct 123 VWAWKQWRIHKIAKATDLVLAFLPFEKAFYDRFDVPCRFIGHTLADQLPLEPEKQQARQS 182
Query 192 LGLNPEKTYIALLPGSRKGEVERLLPMLLGSAEILLKKYPDVEYLIPAISDVRKKQIQDG 251
LGL + +A+LPGSRK EVE L P+ L SA ++ ++YPD ++++P ++ RKKQ+ +
Sbjct 183 LGLQADAKLLAILPGSRKAEVEILGPIFLQSAALISRQYPDYKFIVPMVNGARKKQLLEQ 242
Query 252 IQSIAPQYAQKLHVLENQDQESKIGRQVMNASDIVALASGTATLEAMLLHRPMVSFYKLN 311
Q AP L + + Q V+ ++D V LASGTA LEAML PMV YK+N
Sbjct 243 QQQYAPDL--PLQIFDGQ------ASAVLQSADAVLLASGTAALEAMLAKVPMVVAYKVN 294
Query 312 TLTYIIAKLLVKIQYYSLPNIIAGKKVIEELIQKDANPERLAHEIEKLMNNETAKIQMMQ 371
LTY+IAK LVK++Y SLPN+IA K++++EL Q + E + ++ L+ + QM+
Sbjct 295 LLTYVIAKALVKVKYTSLPNLIADKEIVKELSQYNCTVENIVAALQPLLGQDNH--QMIN 352
Query 372 HF-SMHKQLISGNTEDPVQAIMTLI 395
F +HK + QA++ ++
Sbjct 353 TFIRLHKLIRCDADRQAAQAVVDVL 377
>Q5E3F2 Lipid-A-disaccharide synthase [Aliivibrio fischeri (strain
ATCC 700601 / ES114)]
Length=383
Score = 308 bits (789), Expect = 8e-106
Identities = 166/387 (43%), Positives = 254/387 (66%), Gaps = 11/387 (3%)
Query 9 THKLKIGIVVGEVSGDTLGVQLMRSFREQGIDAEFEGIGGPQMIAEGFNSFYPMETLSVM 68
T L+IGIV GE+SGDTLG ++S + Q DAEF GIGGP+MIA+G +S + ME L+VM
Sbjct 2 TKPLRIGIVAGELSGDTLGEGFIKSIKAQYPDAEFVGIGGPKMIAQGCDSLFDMEELAVM 61
Query 69 GIVEVLKDIKKLFAVRDGLVQRWREHPVDVFVGIDAPDFNLRLSKSLKEKNLPIRTVQYV 128
G+VEVL + +L V+ LV+ + ++P DVF+GIDAPDFNLRL K+LK+ I+TV YV
Sbjct 62 GLVEVLGRLPRLLKVKAELVRYFTQNPPDVFIGIDAPDFNLRLEKTLKDNG--IKTVHYV 119
Query 129 SPSVWAWRQGRVKGIKATIDLVLCLFPFEKNFYEQHSVRAAFVGHPLAKLLPLNNSLVEA 188
SPSVWAWR R+ I A DLVL PFEK FY++++V F+GH LA +P+ + A
Sbjct 120 SPSVWAWRPKRIFKIDAATDLVLAFLPFEKAFYDKYNVACEFIGHTLADAIPMETDKIAA 179
Query 189 KQALGLNPEKTYIALLPGSRKGEVERLLPMLLGSAEILLKKYPDVEYLIPAISDVRKKQI 248
+ LGL E+ ++A+LPGSR GEV + + + + + K++P++ +++ A+++ R++Q
Sbjct 180 RDLLGLEQEREWLAVLPGSRGGEVALIAKPFIETCQRIHKQHPNMGFVVAAVNEKRREQF 239
Query 249 QDGIQSIAPQYAQKLHVLENQDQESKIGRQVMNASDIVALASGTATLEAMLLHRPMVSFY 308
+ ++ AP+ L + QD R VM A+D V LASGT LE ML+ RPMV Y
Sbjct 240 ETIWKATAPE----LDFVIIQD----TARNVMTAADAVLLASGTVALECMLVKRPMVVGY 291
Query 309 KLNTLTYIIAKLLVKIQYYSLPNIIAGKKVIEELIQKDANPERLAHEIEKLMNNETAKIQ 368
++N LT IA+ L ++ SLPN++AGK++++E IQ++ +P+ L +EK++NN+ ++
Sbjct 292 QVNKLTGWIAQKLSITEFVSLPNVLAGKELVQEFIQEECHPDFLYPAMEKVLNNDNREL- 350
Query 369 MMQHFSMHKQLISGNTEDPVQAIMTLI 395
+ + MH+ + + A++ LI
Sbjct 351 IEKFTEMHQWIRKDADKQAANAVLRLI 377
>B5F9W3 Lipid-A-disaccharide synthase [Aliivibrio fischeri (strain
MJ11)]
Length=383
Score = 306 bits (785), Expect = 3e-105
Identities = 165/387 (43%), Positives = 255/387 (66%), Gaps = 11/387 (3%)
Query 9 THKLKIGIVVGEVSGDTLGVQLMRSFREQGIDAEFEGIGGPQMIAEGFNSFYPMETLSVM 68
T L+IGIV GE+SGDTLG ++S + Q DAEF GIGGP+MIA+G +S + ME L+VM
Sbjct 2 TKPLRIGIVAGELSGDTLGEGFIKSIKAQYPDAEFVGIGGPKMIAQGCDSLFDMEELAVM 61
Query 69 GIVEVLKDIKKLFAVRDGLVQRWREHPVDVFVGIDAPDFNLRLSKSLKEKNLPIRTVQYV 128
G+VEVL + +L V+ LV+ + ++P DVF+GIDAPDFNLRL K+LK+ I+TV YV
Sbjct 62 GLVEVLGRLPRLLKVKAELVRYFTQNPPDVFIGIDAPDFNLRLEKTLKDNG--IKTVHYV 119
Query 129 SPSVWAWRQGRVKGIKATIDLVLCLFPFEKNFYEQHSVRAAFVGHPLAKLLPLNNSLVEA 188
SPSVWAWR R+ I A DLVL PFEK FY++++V F+GH LA +P+ A
Sbjct 120 SPSVWAWRPKRIFKIDAATDLVLAFLPFEKAFYDKYNVACEFIGHTLADAIPMETDKFAA 179
Query 189 KQALGLNPEKTYIALLPGSRKGEVERLLPMLLGSAEILLKKYPDVEYLIPAISDVRKKQI 248
++ LGL ++ ++A+LPGSR GEV + + + + + K++PD+ +++ A+++ R++Q
Sbjct 180 RELLGLEQDRKWLAVLPGSRGGEVALIAKPFIETCQRIHKQHPDMGFVVAAVNEKRREQ- 238
Query 249 QDGIQSIAPQYAQKLHVLENQDQESKIGRQVMNASDIVALASGTATLEAMLLHRPMVSFY 308
++I + A +L + QD R VM A+D V LASGT LE ML+ RPMV Y
Sbjct 239 ---FETIWKETAPELDFVIIQD----TARNVMTAADAVLLASGTVALECMLVKRPMVVGY 291
Query 309 KLNTLTYIIAKLLVKIQYYSLPNIIAGKKVIEELIQKDANPERLAHEIEKLMNNETAKIQ 368
++N LT IA+ L ++ SLPN++AGK++++E IQ++ +P+ L +EK+++N+ +++
Sbjct 292 QVNKLTGWIAQKLSITEFVSLPNVLAGKELVQEFIQEECHPDFLYPAMEKVLDNDNSEL- 350
Query 369 MMQHFSMHKQLISGNTEDPVQAIMTLI 395
+ + MH+ + + A++ LI
Sbjct 351 IEKFTEMHQWIRKDADKQAANAVLRLI 377
>Q21HI5 Lipid-A-disaccharide synthase [Saccharophagus degradans
(strain 2-40 / ATCC 43961 / DSM 17024)]
Length=388
Score = 306 bits (785), Expect = 4e-105
Identities = 167/387 (43%), Positives = 248/387 (64%), Gaps = 16/387 (4%)
Query 13 KIGIVVGEVSGDTLGVQLMRSFREQGIDAEFEGIGGPQMIAEGFNSFYPMETLSVMGIVE 72
++ IVVGE SGD LG LM + +++ D EFEGIGGP+M+A GFNS Y M+ L+VMG VE
Sbjct 6 RVAIVVGEASGDILGAGLMAALKKRYPDCEFEGIGGPKMLALGFNSLYQMDRLAVMGFVE 65
Query 73 VLKDIKKLFAVRDGLVQRWREHPVDVFVGIDAPDFNLRLSKSLKEKNLPIRTVQYVSPSV 132
LK + +L +R L QR+ +P DVF+GIDAPDFNL L +L+E +P+ V YVSPSV
Sbjct 66 PLKRLPELLGIRKSLRQRYLTNPPDVFIGIDAPDFNLNLEVNLREAGVPV--VHYVSPSV 123
Query 133 WAWRQGRVKGIKATIDLVLCLFPFEKNFYEQHSVRAAFVGHPLAKLLPLNNSLVEAKQAL 192
WAWR+GR+K I +DL+L LFPFE +F+ + ++ FVGHPLA +PL N A++ L
Sbjct 124 WAWRRGRLKKIAKAVDLMLTLFPFESSFFNEQNIPNLFVGHPLADTIPLENEKTGARERL 183
Query 193 GLNPE--KTYIALLPGSRKGEVERLLPMLLGSAEILLKKYPDVEYLIPAISDVRKKQIQD 250
GL+ E + ++ALLPGSR GEVE L L +A+ P++ +IPA +D R QI +
Sbjct 184 GLSAENNERWVALLPGSRGGEVEHLCERFLLAAQQSFAGRPNLRIIIPAANDARHSQISE 243
Query 251 GIQSIAPQYAQ-KLHVLENQDQESKIGRQVMNASDIVALASGTATLEAMLLHRPMVSFYK 309
+ +Y++ + +L Q ++ M A+D + +ASGTATLEAMLL RPMV Y
Sbjct 244 ----VLKRYSELPVTLLHGQSHDA------MLAADAILIASGTATLEAMLLKRPMVIAYH 293
Query 310 LNTLTYIIAKLLVKIQYYSLPNIIAGKKVIEELIQKDANPERLAHEIEKLMNNETAKIQM 369
+ +Y + LVK ++ LPN++A K+++ EL+Q +A P +L+ + +++E Q+
Sbjct 294 MAAFSYWLLSKLVKSKFVGLPNLLADKELVPELLQHNATPSQLSAALNVYLDSEKTTQQL 353
Query 370 MQHF-SMHKQLISGNTEDPVQAIMTLI 395
++ F ++H QL +E Q I+ ++
Sbjct 354 IEQFNAIHLQLRRDASETAAQGIVDML 380
>A7MY02 Lipid-A-disaccharide synthase [Vibrio campbellii (strain
ATCC BAA-1116)]
Length=379
Score = 305 bits (782), Expect = 8e-105
Identities = 163/386 (42%), Positives = 246/386 (64%), Gaps = 13/386 (3%)
Query 12 LKIGIVVGEVSGDTLGVQLMRSFREQGIDAEFEGIGGPQMIAEGFNSFYPMETLSVMGIV 71
L+IGI+ GE+SGDTLG +++ ++Q DAEF GIGGP+MIA+G S + ME L+VMG+V
Sbjct 5 LRIGIIAGELSGDTLGEGFIKAVKQQYPDAEFVGIGGPKMIAQGCESLFDMEELAVMGLV 64
Query 72 EVLKDIKKLFAVRDGLVQRWREHPVDVFVGIDAPDFNLRLSKSLKEKNLPIRTVQYVSPS 131
EVL + +L V+ LV+ + E+P DVF+GIDAPDFNLR+ LK N I+TV YVSPS
Sbjct 65 EVLGRLPRLLKVKAQLVKYFTENPPDVFIGIDAPDFNLRVELDLK--NAGIKTVHYVSPS 122
Query 132 VWAWRQGRVKGIKATIDLVLCLFPFEKNFYEQHSVRAAFVGHPLAKLLPLNNSLVEAKQA 191
VWAWRQ R+ I+A +LVL PFEK FY++ +V F+GH LA +PL + A++
Sbjct 123 VWAWRQKRIFKIEAATNLVLAFLPFEKAFYDKFNVPCEFIGHTLADAIPLQSDKASAREI 182
Query 192 LGLNPEKTYIALLPGSRKGEVERLLPMLLGSAEILLKKYPDVEYLIPAISDVRKKQIQDG 251
LGL +K ++++LPGSR E++ L + + + L +K+PD+ +++ ++ R++Q +
Sbjct 183 LGLEQDKQWLSVLPGSRGSELKMLSQPFIETCKKLHQKFPDIGFVVALVNQKRREQFEQA 242
Query 252 IQSIAPQYAQKLHVLENQDQESKIGRQVMNASDIVALASGTATLEAMLLHRPMVSFYKLN 311
+ AP+ KL R V+ ASD V LASGT LE MLL RPMV Y++N
Sbjct 243 WKEHAPELDFKL--------VDDTARNVITASDAVMLASGTVALECMLLKRPMVVGYRVN 294
Query 312 TLTYIIAKLLVKIQYYSLPNIIAGKKVIEELIQKDANPERLAHEIEKLMNNETAKIQMMQ 371
+T +AK L+K +Y SLPNI+A ++++E +Q D P+ L E+ +L+ ++ +M+
Sbjct 295 AVTAFLAKRLLKTKYVSLPNILADTELVKEYLQDDCTPDNLFDEVSRLLESDNR--EMLD 352
Query 372 HFS-MHKQLISGNTEDPVQAIMTLIQ 396
F+ MH + + A++ LI+
Sbjct 353 KFTEMHHWIRKDADQQAANAVLKLIE 378
>Q87MF0 Lipid-A-disaccharide synthase [Vibrio parahaemolyticus
serotype O3:K6 (strain RIMD 2210633)]
Length=379
Score = 304 bits (779), Expect = 2e-104
Identities = 163/385 (42%), Positives = 244/385 (63%), Gaps = 11/385 (3%)
Query 12 LKIGIVVGEVSGDTLGVQLMRSFREQGIDAEFEGIGGPQMIAEGFNSFYPMETLSVMGIV 71
L+IGI+ GE+SGDTLG +++ +E+ +AEF GIGGP+MIA+G S + ME L+VMG+V
Sbjct 5 LRIGIIAGELSGDTLGEGFIKAVKERYPNAEFVGIGGPKMIAQGCESLFDMEELAVMGLV 64
Query 72 EVLKDIKKLFAVRDGLVQRWREHPVDVFVGIDAPDFNLRLSKSLKEKNLPIRTVQYVSPS 131
EVL + +L V+ LV+ + ++P DVFVGIDAPDFNLRL LK+ I+TV YVSPS
Sbjct 65 EVLGRLPRLLKVKAELVKYFTQNPPDVFVGIDAPDFNLRLELDLKQAG--IKTVHYVSPS 122
Query 132 VWAWRQGRVKGIKATIDLVLCLFPFEKNFYEQHSVRAAFVGHPLAKLLPLNNSLVEAKQA 191
VWAWRQ R+ I+A +LVL PFEK FY++ +V F+GH LA +PL + A+
Sbjct 123 VWAWRQKRIFKIEAATNLVLAFLPFEKAFYDKFNVPCEFIGHTLADAIPLQSEQAPARDL 182
Query 192 LGLNPEKTYIALLPGSRKGEVERLLPMLLGSAEILLKKYPDVEYLIPAISDVRKKQIQDG 251
LGL +K ++A+LPGSR E++ L + + ++L +KYP + +++ ++ R++Q +
Sbjct 183 LGLEQDKKWLAVLPGSRGSELKMLSQPFIETCKLLHQKYPGLGFVVALVNQKRREQFEQA 242
Query 252 IQSIAPQYAQKLHVLENQDQESKIGRQVMNASDIVALASGTATLEAMLLHRPMVSFYKLN 311
+ AP+ KL R V+ ASD V LASGT LE MLL RPMV Y++N
Sbjct 243 WKEHAPELDFKL--------VDDTARNVITASDAVMLASGTVALECMLLKRPMVVGYRVN 294
Query 312 TLTYIIAKLLVKIQYYSLPNIIAGKKVIEELIQKDANPERLAHEIEKLMNNETAKIQMMQ 371
T T +AK L+K +Y SLPNI+A ++++E +Q D P+ L +E+ +L+ ++ K + +
Sbjct 295 TFTAFLAKRLLKTKYVSLPNILADDELVKEYLQDDCTPDNLFNEVSRLLESDN-KPMLDK 353
Query 372 HFSMHKQLISGNTEDPVQAIMTLIQ 396
MH + + A++ LI+
Sbjct 354 FTEMHHWIRKDADQQAANAVLKLIE 378
>P10441 Lipid-A-disaccharide synthase [Escherichia coli (strain
K12)]
Length=382
Score = 297 bits (761), Expect = 1e-101
Identities = 165/386 (43%), Positives = 241/386 (62%), Gaps = 11/386 (3%)
Query 12 LKIGIVVGEVSGDTLGVQLMRSFREQGIDAEFEGIGGPQMIAEGFNSFYPMETLSVMGIV 71
L I +V GE SGD LG L+R+ +E +A F G+ GP+M AEG ++Y ME L+VMGIV
Sbjct 7 LTIALVAGETSGDILGAGLIRALKEHVPNARFVGVAGPRMQAEGCEAWYEMEELAVMGIV 66
Query 72 EVLKDIKKLFAVRDGLVQRWREHPVDVFVGIDAPDFNLRLSKSLKEKNLPIRTVQYVSPS 131
EVL +++L +R L +R+ E DVFVGIDAPDFN+ L +LK++ I+T+ YVSPS
Sbjct 67 EVLGRLRRLLHIRADLTKRFGELKPDVFVGIDAPDFNITLEGNLKKQG--IKTIHYVSPS 124
Query 132 VWAWRQGRVKGIKATIDLVLCLFPFEKNFYEQHSVRAAFVGHPLAKLLPLNNSLVEAKQA 191
VWAWRQ RV I DLVL PFEK FY++++V F+GH +A +PL+ A+
Sbjct 125 VWAWRQKRVFKIGRATDLVLAFLPFEKAFYDKYNVPCRFIGHTMADAMPLDPDKNAARDV 184
Query 192 LGLNPEKTYIALLPGSRKGEVERLLPMLLGSAEILLKKYPDVEYLIPAISDVRKKQIQDG 251
LG+ + +ALLPGSR EVE L L +A++L + YPD+E ++P ++ R++Q +
Sbjct 185 LGIPHDAHCLALLPGSRGAEVEMLSADFLKTAQLLRQTYPDLEIVVPLVNAKRREQFERI 244
Query 252 IQSIAPQYAQKLHVLENQDQESKIGRQVMNASDIVALASGTATLEAMLLHRPMVSFYKLN 311
+AP + +H+L+ +GR+ M ASD LASGTA LE ML PMV Y++
Sbjct 245 KAEVAPDLS--VHLLDG------MGREAMVASDAALLASGTAALECMLAKCPMVVGYRMK 296
Query 312 TLTYIIAKLLVKIQYYSLPNIIAGKKVIEELIQKDANPERLAHEIEKLMNNETAKIQMMQ 371
T+ +AK LVK Y SLPN++AG+++++EL+Q++ P++LA + L+ N M
Sbjct 297 PFTFWLAKRLVKTDYVSLPNLLAGRELVKELLQEECEPQKLAAALLPLLANGKTSHAMHD 356
Query 372 HF-SMHKQLISGNTEDPVQAIMTLIQ 396
F +H+Q+ E QA++ L Q
Sbjct 357 TFRELHQQIRCNADEQAAQAVLELAQ 382
>P45011 Lipid-A-disaccharide synthase [Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=390
Score = 287 bits (735), Expect = 1e-97
Identities = 154/388 (40%), Positives = 237/388 (61%), Gaps = 15/388 (4%)
Query 14 IGIVVGEVSGDTLGVQLMRSFREQGIDAEFEGIGGPQMIAEGFNSFYPMETLSVMGIVEV 73
I +V GEVSGD LG L+R + +A F GI GP+M+AEG + ME LSVMG+ E+
Sbjct 8 IALVAGEVSGDILGAGLIRQLKAHYPNARFIGIAGPRMLAEGCETLVDMEELSVMGLAEI 67
Query 74 LKDIKKLFAVRDGLVQRWREHPVDVFVGIDAPDFNLRLSKSLKEKNLPIRTVQYVSPSVW 133
LK + +L +R ++Q + DV++GIDAPDFNL + LK I+T+ YVSPSVW
Sbjct 68 LKHLPRLLKIRKNVIQTMLQEKPDVYIGIDAPDFNLDVELKLKANG--IKTIHYVSPSVW 125
Query 134 AWRQGRVKGIKATIDLVLCLFPFEKNFYEQHSVRAAFVGHPLAKLLPLNNSLVEAKQALG 193
AWRQ R+ I VL PFEK FY++ +V F+GH +A +PL + EA Q L
Sbjct 126 AWRQNRIHKIAKATHQVLAFLPFEKAFYDKFNVPCRFIGHTMADAIPLKPNRAEACQTLQ 185
Query 194 LNPEKTYIALLPGSRKGEVERLLPMLLGSAEILLKKYPDVEYLIPAISDVRKKQIQDGIQ 253
++P + Y+A+L GSR EVE L L +A +L +++PD+++L+P +++ R+ Q +
Sbjct 186 IDPAQRYLAILVGSRGSEVEFLAEPFLKTALLLKEQFPDLQFLVPLVNEKRRIQFETIKA 245
Query 254 SIAPQYAQKLHVLENQDQESKIGRQVMNASDIVALASGTATLEAMLLHRPMVSFYKLNTL 313
I P LH+++ RQ M A+D LASGTA LEAML PMV Y++ L
Sbjct 246 KITPNL--DLHLIDGN------ARQAMIAADATLLASGTAALEAMLCKSPMVVGYRMKPL 297
Query 314 TYIIAKLLVKIQYYSLPNIIAGKKVIEELIQKDANPERLAHEIEKLMNNETAKIQ----M 369
TY +AK LVK Y SLPN++A + ++ E+IQ++ PE LA ++ ++++ + ++ +
Sbjct 298 TYFLAKRLVKTDYISLPNLLANEMLVPEMIQEECTPELLAEKLSVYLSDDESAVKNRHVL 357
Query 370 MQHFS-MHKQLISGNTEDPVQAIMTLIQ 396
+QHF+ +H+++ + QA++ L++
Sbjct 358 IQHFTDLHQKIQCNADKQAAQAVIDLLE 385
>F4IF99 Probable lipid-A-disaccharide synthase, mitochondrial
[Arabidopsis thaliana]
Length=460
Score = 169 bits (427), Expect = 3e-51
Identities = 118/373 (32%), Positives = 187/373 (50%), Gaps = 25/373 (7%)
Query 11 KLKIGIVVGEVSGDTLGVQLMRSFREQG-IDAEFEGIGGPQMIAEGFNSFYPMETLSVMG 69
+L++ IV GEVSGD +G +LM S ++ + F G+GG M +G NS +PME L+VMG
Sbjct 39 ELRVFIVSGEVSGDNIGSRLMSSLKKLSPLPIRFNGVGGSLMCKKGLNSLFPMEDLAVMG 98
Query 70 IVEVLKDIKKLFAVRDGLVQRWREHPVDVFVGIDAPDFNLRLSKSL----KEKNLPIRTV 125
+ E+L + K + + V V +D+ F+ RL K L K++ L +V
Sbjct 99 VWELLPHLYKFRVKLKETIDAAVKFKPHVVVTVDSKGFSFRLLKELRARYKQQRLENCSV 158
Query 126 Q--YVSPSVWAWRQG--RVKGIKATIDLVLCLFPFEKNFYEQHSVRAAFVGHPLAKLLPL 181
YV+PS WAW+ G R+ G+ +D + C+ P E+ +H V A FVGHP+ +
Sbjct 159 HFHYVAPSFWAWKGGESRLGGLSEFVDHLFCILPNEERVCREHGVEATFVGHPVLEDASE 218
Query 182 NNSLVEAK-QALGLN----------PEKTYIALLPGSRKGEVERLLPMLLGSAEILLKKY 230
+ + K Q L L + T I++LPGSR EVER+LP+ + ++L +
Sbjct 219 FDLVRRCKPQELKLEGLSFSEHSIPSDSTVISVLPGSRLQEVERMLPIFSKAMKLLKDPF 278
Query 231 PDVEYLIPAISDVRKKQIQDGIQSIAPQYAQKLHVLENQDQESKIGRQVMNASDIVALAS 290
P + LI S+ Q+ I ++ ++ + + K AS S
Sbjct 279 PKLVTLIHVASN---NQVDHYIGESFSEWPVPAILVPSGSTQLKY--DAFGASQAALCTS 333
Query 291 GTATLEAMLLHRPMVSFYKLNTLTYIIAKLLVKIQYYSLPNIIAGKKVIEELIQKDANPE 350
GT +E L H P + Y+ + LT ++ + KI Y SLPNI+ +I E + + NP
Sbjct 334 GTVAVELQLAHLPSLVAYRAHFLTELLIRYKAKIPYISLPNILLDSPIIPEALFQACNPS 393
Query 351 RLAHEIEKLMNNE 363
LA +E+L+ +E
Sbjct 394 NLASILERLLLDE 406
Lambda K H a alpha
0.321 0.138 0.394 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1775148
Database: 42e4c6f03227f98fad16bbf4e9eed02c.SwissProt.fasta
Posted date: May 20, 2024 8:12 AM
Number of letters in database: 5,836
Number of sequences in database: 15
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
