BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: d71e06a58c174aed0f5067c69ab1b328.SwissProt.fasta
22 sequences; 5,613 total letters
Query= ACIAD2362
Length=254
Score E
Sequences producing significant alignments: (Bits) Value
Q6F9X2 3-deoxy-manno-octulosonate cytidylyltransferase [Acinetoba... 503 0.0
B0VMY7 3-deoxy-manno-octulosonate cytidylyltransferase [Acinetoba... 412 5e-151
B2HZD0 3-deoxy-manno-octulosonate cytidylyltransferase [Acinetoba... 412 5e-151
A3M4Z0 3-deoxy-manno-octulosonate cytidylyltransferase [Acinetoba... 412 7e-151
B0VD12 3-deoxy-manno-octulosonate cytidylyltransferase [Acinetoba... 410 2e-150
B7H3M4 3-deoxy-manno-octulosonate cytidylyltransferase [Acinetoba... 410 2e-150
A5WF97 3-deoxy-manno-octulosonate cytidylyltransferase [Psychroba... 295 1e-104
Q1QBV8 3-deoxy-manno-octulosonate cytidylyltransferase [Psychroba... 277 2e-97
Q4FS44 3-deoxy-manno-octulosonate cytidylyltransferase [Psychroba... 273 1e-95
Q0VQP3 3-deoxy-manno-octulosonate cytidylyltransferase [Alcanivor... 232 5e-80
B3PFR9 3-deoxy-manno-octulosonate cytidylyltransferase [Cellvibri... 229 1e-78
A9MHW5 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonell... 228 1e-78
P04951 3-deoxy-manno-octulosonate cytidylyltransferase [Escherich... 223 1e-76
Q8EEA9 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferas... 174 2e-57
P42216 3-deoxy-manno-octulosonate cytidylyltransferase [Escherich... 173 5e-57
Q9C920 3-deoxy-manno-octulosonate cytidylyltransferase, mitochond... 146 5e-46
Q9M4G3 3-deoxy-manno-octulosonate cytidylyltransferase [Zea mays] 142 3e-44
B0B9T2 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia... 137 5e-43
P42215 3-deoxy-manno-octulosonate cytidylyltransferase [Escherich... 64.7 4e-17
P0A4V0 N-acylneuraminate cytidylyltransferase [Streptococcus agal... 52.0 5e-11
Q2M5Q2 Pseudaminic acid cytidylyltransferase [Campylobacter jejun... 40.0 3e-07
Q5ZXI0 CMP-N,N'-diacetyllegionaminic acid synthase [Legionella pn... 37.0 3e-06
>Q6F9X2 3-deoxy-manno-octulosonate cytidylyltransferase [Acinetobacter
baylyi (strain ATCC 33305 / BD413 / ADP1)]
Length=253
Score = 503 bits (1296), Expect = 0.0
Identities = 253/253 (100%), Positives = 253/253 (100%), Gaps = 0/253 (0%)
Query 1 MKHIVIPARFSSTRLPGKPLLEIHGRAMILRVVDQAKKVQGFDDLCVATDNERIMQLCQA 60
MKHIVIPARFSSTRLPGKPLLEIHGRAMILRVVDQAKKVQGFDDLCVATDNERIMQLCQA
Sbjct 1 MKHIVIPARFSSTRLPGKPLLEIHGRAMILRVVDQAKKVQGFDDLCVATDNERIMQLCQA 60
Query 61 EGVDVVLTSPDHPSGTDRLSEVARLKGWSEDDIIVNVQGDEPLLPATLVQQVAELLVAKP 120
EGVDVVLTSPDHPSGTDRLSEVARLKGWSEDDIIVNVQGDEPLLPATLVQQVAELLVAKP
Sbjct 61 EGVDVVLTSPDHPSGTDRLSEVARLKGWSEDDIIVNVQGDEPLLPATLVQQVAELLVAKP 120
Query 121 NCSMSTLCEPIHTLDEFQRDSIVKVVMSQYQEALYFSRATIPYDRDAAQTQQSSRFEHAY 180
NCSMSTLCEPIHTLDEFQRDSIVKVVMSQYQEALYFSRATIPYDRDAAQTQQSSRFEHAY
Sbjct 121 NCSMSTLCEPIHTLDEFQRDSIVKVVMSQYQEALYFSRATIPYDRDAAQTQQSSRFEHAY 180
Query 181 RHLGLYAYRVGLLQEYVAWQQGVLEKLESLEQLRVLENGHRIAIALAEVNLPPGVDTPAD 240
RHLGLYAYRVGLLQEYVAWQQGVLEKLESLEQLRVLENGHRIAIALAEVNLPPGVDTPAD
Sbjct 181 RHLGLYAYRVGLLQEYVAWQQGVLEKLESLEQLRVLENGHRIAIALAEVNLPPGVDTPAD 240
Query 241 LERLNALPRSYFE 253
LERLNALPRSYFE
Sbjct 241 LERLNALPRSYFE 253
>B0VMY7 3-deoxy-manno-octulosonate cytidylyltransferase [Acinetobacter
baumannii (strain SDF)]
Length=253
Score = 412 bits (1059), Expect = 5e-151
Identities = 206/253 (81%), Positives = 224/253 (89%), Gaps = 0/253 (0%)
Query 1 MKHIVIPARFSSTRLPGKPLLEIHGRAMILRVVDQAKKVQGFDDLCVATDNERIMQLCQA 60
MKHIVIPARFSS+RLPGKPLL IH R MILRVVDQAKKV+GFDDLCVATD+ERI ++C+A
Sbjct 1 MKHIVIPARFSSSRLPGKPLLLIHDRPMILRVVDQAKKVEGFDDLCVATDDERIAEICRA 60
Query 61 EGVDVVLTSPDHPSGTDRLSEVARLKGWSEDDIIVNVQGDEPLLPATLVQQVAELLVAKP 120
EGVDVVLTS DHPSGTDRLSEVAR+KGW DDIIVNVQGDEPLLPA LVQQVA+LLV KP
Sbjct 61 EGVDVVLTSADHPSGTDRLSEVARIKGWDADDIIVNVQGDEPLLPAQLVQQVAKLLVDKP 120
Query 121 NCSMSTLCEPIHTLDEFQRDSIVKVVMSQYQEALYFSRATIPYDRDAAQTQQSSRFEHAY 180
NCSMSTLCEPIH LDEFQRDSIVKVVMS+ EALYFSRATIPYDRD+A+ + + A+
Sbjct 121 NCSMSTLCEPIHALDEFQRDSIVKVVMSKQNEALYFSRATIPYDRDSAKQAEPTLHSQAF 180
Query 181 RHLGLYAYRVGLLQEYVAWQQGVLEKLESLEQLRVLENGHRIAIALAEVNLPPGVDTPAD 240
RHLGLYAYRV LLQEYV W+ G LEKLESLEQLRVLENGHRIAIA+AE NLPPGVDT AD
Sbjct 181 RHLGLYAYRVSLLQEYVTWEMGKLEKLESLEQLRVLENGHRIAIAVAEANLPPGVDTQAD 240
Query 241 LERLNALPRSYFE 253
L+RLN +P FE
Sbjct 241 LDRLNNMPVESFE 253
>B2HZD0 3-deoxy-manno-octulosonate cytidylyltransferase [Acinetobacter
baumannii (strain ACICU)]
Length=253
Score = 412 bits (1059), Expect = 5e-151
Identities = 206/253 (81%), Positives = 224/253 (89%), Gaps = 0/253 (0%)
Query 1 MKHIVIPARFSSTRLPGKPLLEIHGRAMILRVVDQAKKVQGFDDLCVATDNERIMQLCQA 60
MKHIVIPARFSS+RLPGKPLL IH R MILRVVDQAKKV+GFDDLCVATD+ERI ++C+A
Sbjct 1 MKHIVIPARFSSSRLPGKPLLLIHDRPMILRVVDQAKKVEGFDDLCVATDDERIAEICRA 60
Query 61 EGVDVVLTSPDHPSGTDRLSEVARLKGWSEDDIIVNVQGDEPLLPATLVQQVAELLVAKP 120
EGVDVVLTS DHPSGTDRLSEVAR+KGW DDIIVNVQGDEPLLPA LVQQVA+LLV KP
Sbjct 61 EGVDVVLTSADHPSGTDRLSEVARIKGWDADDIIVNVQGDEPLLPAQLVQQVAKLLVDKP 120
Query 121 NCSMSTLCEPIHTLDEFQRDSIVKVVMSQYQEALYFSRATIPYDRDAAQTQQSSRFEHAY 180
NCSMSTLCEPIH LDEFQRDSIVKVVMS+ EALYFSRATIPYDRD+A+ + + A+
Sbjct 121 NCSMSTLCEPIHALDEFQRDSIVKVVMSKQNEALYFSRATIPYDRDSAKQAEPTLHSQAF 180
Query 181 RHLGLYAYRVGLLQEYVAWQQGVLEKLESLEQLRVLENGHRIAIALAEVNLPPGVDTPAD 240
RHLGLYAYRV LLQEYV W+ G LEKLESLEQLRVLENGHRIAIA+AE NLPPGVDT AD
Sbjct 181 RHLGLYAYRVSLLQEYVTWEMGKLEKLESLEQLRVLENGHRIAIAVAEANLPPGVDTQAD 240
Query 241 LERLNALPRSYFE 253
L+RLN +P FE
Sbjct 241 LDRLNNMPVESFE 253
>A3M4Z0 3-deoxy-manno-octulosonate cytidylyltransferase [Acinetobacter
baumannii (strain ATCC 17978 / CIP 53.77 / LMG 1025
/ NCDC KC755 / 5377)]
Length=253
Score = 412 bits (1058), Expect = 7e-151
Identities = 206/253 (81%), Positives = 223/253 (88%), Gaps = 0/253 (0%)
Query 1 MKHIVIPARFSSTRLPGKPLLEIHGRAMILRVVDQAKKVQGFDDLCVATDNERIMQLCQA 60
MKHIVIPARFSS+RLPGKPLL IH R MILRVVDQAKKV+GFDDLCVATD+ERI ++C+A
Sbjct 1 MKHIVIPARFSSSRLPGKPLLLIHDRPMILRVVDQAKKVEGFDDLCVATDDERIAEICRA 60
Query 61 EGVDVVLTSPDHPSGTDRLSEVARLKGWSEDDIIVNVQGDEPLLPATLVQQVAELLVAKP 120
EGVDVVLTS DHPSGTDRLSEVAR+KGW DDIIVNVQGDEPLLPA LVQQVA+LLV KP
Sbjct 61 EGVDVVLTSADHPSGTDRLSEVARIKGWDADDIIVNVQGDEPLLPAQLVQQVAKLLVDKP 120
Query 121 NCSMSTLCEPIHTLDEFQRDSIVKVVMSQYQEALYFSRATIPYDRDAAQTQQSSRFEHAY 180
NCSMSTLCEPIH LDEFQRDSIVKVVMS+ EALYFSRATIPYDRD A+ + + A+
Sbjct 121 NCSMSTLCEPIHALDEFQRDSIVKVVMSKQNEALYFSRATIPYDRDGAKRDEPTLHTQAF 180
Query 181 RHLGLYAYRVGLLQEYVAWQQGVLEKLESLEQLRVLENGHRIAIALAEVNLPPGVDTPAD 240
RHLGLYAYRV LLQEYV W+ G LEKLESLEQLRVLENGHRIAIA+AE NLPPGVDT AD
Sbjct 181 RHLGLYAYRVSLLQEYVTWEMGKLEKLESLEQLRVLENGHRIAIAVAEANLPPGVDTQAD 240
Query 241 LERLNALPRSYFE 253
L+RLN +P FE
Sbjct 241 LDRLNNMPVESFE 253
>B0VD12 3-deoxy-manno-octulosonate cytidylyltransferase [Acinetobacter
baumannii (strain AYE)]
Length=253
Score = 410 bits (1055), Expect = 2e-150
Identities = 206/253 (81%), Positives = 223/253 (88%), Gaps = 0/253 (0%)
Query 1 MKHIVIPARFSSTRLPGKPLLEIHGRAMILRVVDQAKKVQGFDDLCVATDNERIMQLCQA 60
MKHIVIPARFSS+RLPGKPLL IH R MILRVVDQAKKV+GFDDLCVATD+ERI ++C A
Sbjct 1 MKHIVIPARFSSSRLPGKPLLLIHDRPMILRVVDQAKKVEGFDDLCVATDDERIAEICCA 60
Query 61 EGVDVVLTSPDHPSGTDRLSEVARLKGWSEDDIIVNVQGDEPLLPATLVQQVAELLVAKP 120
EGVDVVLTS DHPSGTDRLSEVAR+KGW DDIIVNVQGDEPLLPA LVQQVA+LLV KP
Sbjct 61 EGVDVVLTSADHPSGTDRLSEVARIKGWDADDIIVNVQGDEPLLPAQLVQQVAKLLVDKP 120
Query 121 NCSMSTLCEPIHTLDEFQRDSIVKVVMSQYQEALYFSRATIPYDRDAAQTQQSSRFEHAY 180
NCSMSTLCEPIH LDEFQRDSIVKVVMS+ EALYFSRATIPYDRD+A+ + + A+
Sbjct 121 NCSMSTLCEPIHALDEFQRDSIVKVVMSKQNEALYFSRATIPYDRDSAKQAEPTLHSQAF 180
Query 181 RHLGLYAYRVGLLQEYVAWQQGVLEKLESLEQLRVLENGHRIAIALAEVNLPPGVDTPAD 240
RHLGLYAYRV LLQEYV W+ G LEKLESLEQLRVLENGHRIAIA+AE NLPPGVDT AD
Sbjct 181 RHLGLYAYRVSLLQEYVTWEMGKLEKLESLEQLRVLENGHRIAIAVAEANLPPGVDTQAD 240
Query 241 LERLNALPRSYFE 253
L+RLN +P FE
Sbjct 241 LDRLNNMPVESFE 253
>B7H3M4 3-deoxy-manno-octulosonate cytidylyltransferase [Acinetobacter
baumannii (strain AB307-0294)]
Length=253
Score = 410 bits (1055), Expect = 2e-150
Identities = 206/253 (81%), Positives = 223/253 (88%), Gaps = 0/253 (0%)
Query 1 MKHIVIPARFSSTRLPGKPLLEIHGRAMILRVVDQAKKVQGFDDLCVATDNERIMQLCQA 60
MKHIVIPARFSS+RLPGKPLL IH R MILRVVDQAKKV+GFDDLCVATD+ERI ++C A
Sbjct 1 MKHIVIPARFSSSRLPGKPLLLIHDRPMILRVVDQAKKVEGFDDLCVATDDERIAEICCA 60
Query 61 EGVDVVLTSPDHPSGTDRLSEVARLKGWSEDDIIVNVQGDEPLLPATLVQQVAELLVAKP 120
EGVDVVLTS DHPSGTDRLSEVAR+KGW DDIIVNVQGDEPLLPA LVQQVA+LLV KP
Sbjct 61 EGVDVVLTSADHPSGTDRLSEVARIKGWDADDIIVNVQGDEPLLPAQLVQQVAKLLVDKP 120
Query 121 NCSMSTLCEPIHTLDEFQRDSIVKVVMSQYQEALYFSRATIPYDRDAAQTQQSSRFEHAY 180
NCSMSTLCEPIH LDEFQRDSIVKVVMS+ EALYFSRATIPYDRD+A+ + + A+
Sbjct 121 NCSMSTLCEPIHALDEFQRDSIVKVVMSKQNEALYFSRATIPYDRDSAKQAEPTLHSQAF 180
Query 181 RHLGLYAYRVGLLQEYVAWQQGVLEKLESLEQLRVLENGHRIAIALAEVNLPPGVDTPAD 240
RHLGLYAYRV LLQEYV W+ G LEKLESLEQLRVLENGHRIAIA+AE NLPPGVDT AD
Sbjct 181 RHLGLYAYRVSLLQEYVTWEMGKLEKLESLEQLRVLENGHRIAIAVAEANLPPGVDTQAD 240
Query 241 LERLNALPRSYFE 253
L+RLN +P FE
Sbjct 241 LDRLNNMPVESFE 253
>A5WF97 3-deoxy-manno-octulosonate cytidylyltransferase [Psychrobacter
sp. (strain PRwf-1)]
Length=275
Score = 295 bits (756), Expect = 1e-104
Identities = 157/258 (61%), Positives = 183/258 (71%), Gaps = 10/258 (4%)
Query 3 HIVIPARFSSTRLPGKPLLEIHGRAMILRVVDQAKKVQGFDDLCVATDNERIMQLCQAEG 62
HIVIPARF STRLPGKPLLEIHG+ MIL V +A + DDLC+ATD+ERI +CQ G
Sbjct 15 HIVIPARFKSTRLPGKPLLEIHGKPMILWVAQKASQATFADDLCIATDDERIAAVCQQAG 74
Query 63 VDVVLTSPDHPSGTDRLSEVARLKGWSEDDIIVNVQGDEPLLPATLVQQVAELLVAKPNC 122
+VV+T H SGTDRLSEVA+ KGW +DI+VN+QGDEPL+P L++QV +LLV KP+C
Sbjct 75 YEVVMTDAHHASGTDRLSEVAQKKGWDAEDIVVNMQGDEPLVPPQLLEQVKDLLVNKPDC 134
Query 123 SMSTLCEPIHTLDEFQRDSIVKVVMSQYQEALYFSRATIPYDRDAAQTQ-QSSRFEH--- 178
M+TL E I EF R S+VKVV + ALYFSRA IP DRD A Q H
Sbjct 135 VMATLYELILDYQEFIRPSVVKVVTDNLKHALYFSRAPIPCDRDHAMAMVQQPEGSHQPP 194
Query 179 ------AYRHLGLYAYRVGLLQEYVAWQQGVLEKLESLEQLRVLENGHRIAIALAEVNLP 232
AYRHLG+YAYRV LLQ++V W G+LE LESLEQLRVLENG +IAI A V LP
Sbjct 195 LTVPKQAYRHLGIYAYRVKLLQDFVRWSPGILENLESLEQLRVLENGGKIAIEAASVQLP 254
Query 233 PGVDTPADLERLNALPRS 250
PGVD DL+RLNALP S
Sbjct 255 PGVDLQEDLDRLNALPIS 272
>Q1QBV8 3-deoxy-manno-octulosonate cytidylyltransferase [Psychrobacter
cryohalolentis (strain ATCC BAA-1226 / DSM 17306 /
VKM B-2378 / K5)]
Length=268
Score = 277 bits (708), Expect = 2e-97
Identities = 148/256 (58%), Positives = 183/256 (71%), Gaps = 5/256 (2%)
Query 3 HIVIPARFSSTRLPGKPLLEIHGRAMILRVVDQAKKVQGFDDLCVATDNERIMQLCQAEG 62
HIVIPAR STRLP KPLL IHG+ MIL V ++A+ DD+C+ATD+E I ++C G
Sbjct 11 HIVIPARLKSTRLPNKPLLTIHGKPMILWVAEKARLADFADDMCIATDDESIAKICLDAG 70
Query 63 VDVVLTSPDHPSGTDRLSEVARLKGWSEDDIIVNVQGDEPLLPATLVQQVAELLVAKPNC 122
DVV+TS +H SGTDRL+EVA +KGW+ DI+VN+QGDEPL+P L++QV LLV
Sbjct 71 FDVVMTSSEHASGTDRLAEVAAIKGWAAHDIVVNMQGDEPLVPPLLLEQVKTLLVQDAES 130
Query 123 SMSTLCEPIHTLDEFQRDSIVKVV---MSQYQEALYFSRATIPYDRDAAQTQQSSRF--E 177
M+TLCEPI D F R S+VKVV + Q ALYFSRA IP +RD T ++S+ +
Sbjct 131 VMATLCEPIEDYDTFMRPSVVKVVSQTSNDQQRALYFSRAPIPCNRDVVLTSENSKQPPK 190
Query 178 HAYRHLGLYAYRVGLLQEYVAWQQGVLEKLESLEQLRVLENGHRIAIALAEVNLPPGVDT 237
+AYRHLGLYAYRV LLQ++V Q LE LESLEQLRVLENG IAIA A +LP GVDT
Sbjct 191 NAYRHLGLYAYRVSLLQQFVHCSQTPLEILESLEQLRVLENGGHIAIAKAACSLPAGVDT 250
Query 238 PADLERLNALPRSYFE 253
DL+RLNA+ + F+
Sbjct 251 QEDLDRLNAMSLTDFQ 266
>Q4FS44 3-deoxy-manno-octulosonate cytidylyltransferase [Psychrobacter
arcticus (strain DSM 17307 / VKM B-2377 / 273-4)]
Length=268
Score = 273 bits (697), Expect = 1e-95
Identities = 144/256 (56%), Positives = 179/256 (70%), Gaps = 5/256 (2%)
Query 3 HIVIPARFSSTRLPGKPLLEIHGRAMILRVVDQAKKVQGFDDLCVATDNERIMQLCQAEG 62
HIVIPAR STRLP KPLL IHG+ MIL V ++A+ DD+C+ATD+E + ++C G
Sbjct 11 HIVIPARLKSTRLPNKPLLTIHGKPMILWVAEKAQLADFADDMCIATDDESVAKVCAEAG 70
Query 63 VDVVLTSPDHPSGTDRLSEVARLKGWSEDDIIVNVQGDEPLLPATLVQQVAELLVAKPNC 122
DVV+T DH SGTDRL+EVA +KGW+ DI+VN+QGDEPL+P L++QV LLV
Sbjct 71 FDVVMTRSDHASGTDRLAEVAAIKGWAAHDIVVNMQGDEPLIPPLLLEQVKTLLVQDAES 130
Query 123 SMSTLCEPIHTLDEFQRDSIVKVV---MSQYQEALYFSRATIPYDRDAAQTQQSSRF--E 177
M+TLCEPI + F S+VKVV + Q A+YFSRA IP DRD + + + +
Sbjct 131 VMATLCEPIEDYNTFIHPSVVKVVSQNTNNQQRAIYFSRAPIPCDRDVVLSDEDNTQAPK 190
Query 178 HAYRHLGLYAYRVGLLQEYVAWQQGVLEKLESLEQLRVLENGHRIAIALAEVNLPPGVDT 237
+AYRHLGLYAYRV LLQ++V W Q LE LESLEQLRVLENG IAIA A LP GVDT
Sbjct 191 NAYRHLGLYAYRVSLLQQFVHWSQTPLEILESLEQLRVLENGGHIAIAKAACPLPAGVDT 250
Query 238 PADLERLNALPRSYFE 253
DL+RLNA+ + F+
Sbjct 251 QEDLDRLNAMSLTAFQ 266
>Q0VQP3 3-deoxy-manno-octulosonate cytidylyltransferase [Alcanivorax
borkumensis (strain ATCC 700651 / DSM 11573 / NCIMB 13689
/ SK2)]
Length=251
Score = 232 bits (592), Expect = 5e-80
Identities = 125/245 (51%), Positives = 161/245 (66%), Gaps = 3/245 (1%)
Query 3 HIVIPARFSSTRLPGKPLLEIHGRAMILRVVDQAKKVQGFDDLCVATDNERIMQLCQAEG 62
++V+PAR++STRLPGKPL +I G+ M+ RV + ++ D + VATD+ RI + +
Sbjct 4 YVVVPARYASTRLPGKPLADIAGKTMVERVAQRCQQSDA-DQIYVATDDRRIADVL-GDT 61
Query 63 VDVVLTSPDHPSGTDRLSEVARLKGWSEDDIIVNVQGDEPLLPATLVQQVAELLVAKPNC 122
V VV+T DHPSGTDRL EVA ++DDIIVNVQGDEPL+P ++ QVA L A P+C
Sbjct 62 VPVVMTREDHPSGTDRLQEVATKLALADDDIIVNVQGDEPLIPPAVINQVAANLAANPDC 121
Query 123 SMSTLCEPIHTLDEFQRDSIVKVVMSQYQEALYFSRATIPYDRDA-AQTQQSSRFEHAYR 181
M+TLCE I D+ ++VK V +ALYFSRA +P+ RDA A QQ +R
Sbjct 122 QMATLCEAIENSDDLFNPNVVKAVFDNRGKALYFSRAPVPWHRDAFADGQQDLSGGQWWR 181
Query 182 HLGLYAYRVGLLQEYVAWQQGVLEKLESLEQLRVLENGHRIAIALAEVNLPPGVDTPADL 241
H+G+YAYRV L +YV WQ LEKLESLEQLR + NG I + A +P GVDT DL
Sbjct 182 HIGIYAYRVAFLHQYVQWQPATLEKLESLEQLRAMANGVAIHVEPACEVVPGGVDTQTDL 241
Query 242 ERLNA 246
ERL A
Sbjct 242 ERLRA 246
>B3PFR9 3-deoxy-manno-octulosonate cytidylyltransferase [Cellvibrio
japonicus (strain Ueda107)]
Length=255
Score = 229 bits (583), Expect = 1e-78
Identities = 125/248 (50%), Positives = 161/248 (65%), Gaps = 4/248 (2%)
Query 3 HIVIPARFSSTRLPGKPLLEIHGRAMILRVVDQAKKVQGFDDLCVATDNERIMQLCQAEG 62
++VIPAR++STRLP KPL +I G+ MI V ++A + Q + +ATD+ RI + QA G
Sbjct 4 YVVIPARYASTRLPAKPLKDIAGKPMIQHVYERASQSQA-KAVIIATDDARIQAVAQAFG 62
Query 63 VDVVLTSPDHPSGTDRLSEVARLKGWSEDDIIVNVQGDEPLLPATLVQQVAELLVAKPNC 122
VV+TS H SGTDRL EV R G + DDI+VNVQGDEPL+P ++ QVA L A
Sbjct 63 AQVVMTSASHSSGTDRLQEVTRTLGLAADDIVVNVQGDEPLIPPAVINQVATNLAANTYA 122
Query 123 SMSTLCEPIHTLDEFQRDSIVKVVMSQYQEALYFSRATIPYDRDAAQTQQSSRFEH---A 179
S++TL EPIH L++F +IVKVV + ALYFSRA IP+ RD + A
Sbjct 123 SVATLSEPIHYLEDFHNPNIVKVVADKAGRALYFSRAPIPWPRDHFAKPDVNVLPDNFPA 182
Query 180 YRHLGLYAYRVGLLQEYVAWQQGVLEKLESLEQLRVLENGHRIAIALAEVNLPPGVDTPA 239
RH+G+Y+YRV LL +V W Q LE +ESLEQLRVL N I +A A +P GVDT A
Sbjct 183 QRHIGIYSYRVALLDRFVTWPQATLESIESLEQLRVLANSEAIHVAEACAQVPGGVDTEA 242
Query 240 DLERLNAL 247
DL+R+ AL
Sbjct 243 DLQRVKAL 250
Score = 21.2 bits (43), Expect = 0.38
Identities = 10/39 (26%), Positives = 18/39 (46%), Gaps = 0/39 (0%)
Query 52 ERIMQLCQAEGVDVVLTSPDHPSGTDRLSEVARLKGWSE 90
E++ L +E + V P G D +++ R+K E
Sbjct 214 EQLRVLANSEAIHVAEACAQVPGGVDTEADLQRVKALLE 252
>A9MHW5 3-deoxy-manno-octulosonate cytidylyltransferase [Salmonella
arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)]
Length=248
Score = 228 bits (582), Expect = 1e-78
Identities = 120/243 (49%), Positives = 169/243 (70%), Gaps = 2/243 (1%)
Query 4 IVIPARFSSTRLPGKPLLEIHGRAMILRVVDQAKKVQGFDDLCVATDNERIMQLCQAEGV 63
++IPARFSSTRLPGKPLL+I+G+ MI+ V+++A++ G + + VATD+E + + +A G
Sbjct 5 VIIPARFSSTRLPGKPLLDINGKPMIVHVLERARE-SGAERIIVATDHEDVARAVEAAGG 63
Query 64 DVVLTSPDHPSGTDRLSEVARLKGWSEDDIIVNVQGDEPLLPATLVQQVAELLVAKPNCS 123
+V +T DH SGT+RL+EV G+S+D +IVNVQGDEP++PA +++QVAE L A+
Sbjct 64 EVCITRADHQSGTERLAEVVEKCGFSDDTVIVNVQGDEPMIPAVIIRQVAENL-AQRQVG 122
Query 124 MSTLCEPIHTLDEFQRDSIVKVVMSQYQEALYFSRATIPYDRDAAQTQQSSRFEHAYRHL 183
M+TL PIH+ +E + VKVV+ ALYFSRATIP+DRD + + RHL
Sbjct 123 MATLAAPIHSAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKSLETVGDTCLRHL 182
Query 184 GLYAYRVGLLQEYVAWQQGVLEKLESLEQLRVLENGHRIAIALAEVNLPPGVDTPADLER 243
G+Y YR G ++ YV+WQ LE++E LEQLRVL G +I +A+A+ GVDT DLER
Sbjct 183 GIYGYRAGFIRRYVSWQPSPLEQIEMLEQLRVLWYGEKIHVAVAKAVPGTGVDTADDLER 242
Query 244 LNA 246
+ A
Sbjct 243 VRA 245
>P04951 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia
coli (strain K12)]
Length=248
Score = 223 bits (569), Expect = 1e-76
Identities = 117/243 (48%), Positives = 168/243 (69%), Gaps = 2/243 (1%)
Query 4 IVIPARFSSTRLPGKPLLEIHGRAMILRVVDQAKKVQGFDDLCVATDNERIMQLCQAEGV 63
++IPAR++STRLPGKPL++I+G+ MI+ V+++A++ G + + VATD+E + + +A G
Sbjct 5 VIIPARYASTRLPGKPLVDINGKPMIVHVLERARE-SGAERIIVATDHEDVARAVEAAGG 63
Query 64 DVVLTSPDHPSGTDRLSEVARLKGWSEDDIIVNVQGDEPLLPATLVQQVAELLVAKPNCS 123
+V +T DH SGT+RL+EV +S+D +IVNVQGDEP++PAT+++QVA+ L A+
Sbjct 64 EVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNL-AQRQVG 122
Query 124 MSTLCEPIHTLDEFQRDSIVKVVMSQYQEALYFSRATIPYDRDAAQTQQSSRFEHAYRHL 183
M+TL PIH +E + VKVV+ ALYFSRATIP+DRD + ++ RHL
Sbjct 123 MATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAEGLETVGDNFLRHL 182
Query 184 GLYAYRVGLLQEYVAWQQGVLEKLESLEQLRVLENGHRIAIALAEVNLPPGVDTPADLER 243
G+Y YR G ++ YV WQ LE +E LEQLRVL G +I +A+A+ GVDTP DLER
Sbjct 183 GIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLER 242
Query 244 LNA 246
+ A
Sbjct 243 VRA 245
>Q8EEA9 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase
[Shewanella oneidensis (strain MR-1)]
Length=245
Score = 174 bits (441), Expect = 2e-57
Identities = 100/241 (41%), Positives = 142/241 (59%), Gaps = 9/241 (4%)
Query 4 IVIPARFSSTRLPGKPLLEIHGRAMILRVVDQAKKVQGFDDLCVATDNERIMQLCQAEGV 63
++IPAR+ S+R PGKPL I+G+ MI V ++A +G ++ VATD+ERI + G
Sbjct 5 LLIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDERIKSAVEGFGG 64
Query 64 DVVLTSPDHPSGTDRLSEVARLKGWSEDDIIVNVQGDEPLLPATLVQQVAELLVAKP-NC 122
VV+TSPD SGTDR+++ G +DD+++N+QGD+PL+ T ++QV L P
Sbjct 65 KVVMTSPDAASGTDRINDAINQLGLKDDDLVINLQGDQPLIDPTSIEQVISLFERHPGEF 124
Query 123 SMSTLCEPIHTLDEFQRDSIVKVVMSQYQEALYFSRATIPYDRDAAQTQQSSRFEHAYRH 182
M+TL I E VK+V ALYFSRA IP+ RD ++ Y+H
Sbjct 125 EMATLGYEIVNKAELDDPMHVKMVFDNDYYALYFSRARIPFGRD-------TKDYPVYKH 177
Query 183 LGLYAYRVGLLQEYVAWQQGVLEKLESLEQLRVLENGHRIAIALAEVNLPPGVDTPADLE 242
LG+YAY +Q + A G LE LE LEQLR LE GH+I +A++ + VDTP D+
Sbjct 178 LGVYAYTRRFVQAFAALPLGRLEDLEKLEQLRALEYGHKIKVAISAFD-SIEVDTPEDIR 236
Query 243 R 243
+
Sbjct 237 K 237
>P42216 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia
coli]
Length=246
Score = 173 bits (439), Expect = 5e-57
Identities = 109/245 (44%), Positives = 151/245 (62%), Gaps = 14/245 (6%)
Query 4 IVIPARFSSTRLPGKPLLEIHGRAMILRVVDQAKKVQGFDDLCVATDNERIMQLCQAEGV 63
IVIPAR+ S+RLPGKPLL+I G+ MI V ++A +V G ++ VATD+ R+ Q QA G
Sbjct 6 IVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDPRVEQAVQAFGG 65
Query 64 DVVLTSPDHPSGTDRLSEVARLKGWSEDDIIVNVQGDEPLLPATLVQQVAELLVAKPNCS 123
++T DH SGTDRL EV E DI +N+QGDEP++ V+ + + + P
Sbjct 66 KAIMTRNDHESGTDRLVEVMHK---VEADIYINLQGDEPMIRPRDVETLLQGMRDDPALP 122
Query 124 MSTLCEPIHTLDEFQRDSIVKVVMSQYQEALYFSRATIPYDRDAAQTQQSSRFEHAYRHL 183
++TLC I + E S VKVV++ Q+ALYFSR+ IPY R+A + + +H+
Sbjct 123 VATLCHAI-SAAEAAEPSTVKVVVNTRQDALYFSRSPIPYPRNAEKARY-------LKHV 174
Query 184 GLYAYRVGLLQEYVAWQQGVLEKLESLEQLRVLENGHRIAIALAEVNLP-PGVDTPADLE 242
G+YAYR +LQ Y + + E+ ESLEQLR++ G I I EV PGVDTPA LE
Sbjct 175 GIYAYRRDVLQNYSQLPESMPEQAESLEQLRLMNAG--INIRTFEVAATGPGVDTPACLE 232
Query 243 RLNAL 247
++ AL
Sbjct 233 KVRAL 237
>Q9C920 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial
[Arabidopsis thaliana]
Length=290
Score = 146 bits (369), Expect = 5e-46
Identities = 89/245 (36%), Positives = 143/245 (58%), Gaps = 7/245 (3%)
Query 5 VIPARFSSTRLPGKPLLEIHGRAMILRVVDQAKKVQGFDDLCVATDNERIMQLCQAEGVD 64
+IPAR++S+R GKPL++I G+ MI R +++K D + VATD+ERI + C+ G D
Sbjct 48 IIPARYASSRFEGKPLVQILGKPMIQRTWERSKLATTLDHIVVATDDERIAECCRGFGAD 107
Query 65 VVLTSPDHPSGTDRLSEVARLKGWSEDDIIVNVQGDEPLLPATLVQQVAELLVAKPNCSM 124
V++TS +GT+R +E A K + D++VN+QGDEPL+ ++ V + L P+
Sbjct 108 VIMTSESCRNGTERCNE-ALEKLEKKYDVVVNIQGDEPLIEPEIIDGVVKALQVTPDAVF 166
Query 125 STLCEPIHTLDEFQRDSIVKVVMSQYQEALYFSRATIPYDRDAAQTQQSSRFEHAYRHLG 184
ST + D + VK V+ A+YFSR IPY++ + + F + HLG
Sbjct 167 STAVTSLKPEDGLDPNR-VKCVVDNRGYAIYFSRGLIPYNKSG---KVNPDFPYML-HLG 221
Query 185 LYAYRVGLLQEYVAWQQGVLEKLESLEQLRVLENGHRIAIALAEVNLPPGVDTPADLERL 244
+ ++ L+ Y Q L++ E LEQL+VLENG+++ + + + GVDTP D+E++
Sbjct 222 IQSFDSKFLKVYSELQPTPLQQEEDLEQLKVLENGYKMKVIKVD-HEAHGVDTPDDVEKI 280
Query 245 NALPR 249
+L R
Sbjct 281 ESLMR 285
>Q9M4G3 3-deoxy-manno-octulosonate cytidylyltransferase [Zea mays]
Length=298
Score = 142 bits (357), Expect = 3e-44
Identities = 89/247 (36%), Positives = 136/247 (55%), Gaps = 9/247 (4%)
Query 5 VIPARFSSTRLPGKPLLEIHGRAMILRVVDQAKKVQGFDDLCVATDNERIMQLCQAEGVD 64
+IPARF+STR GKPL+ I G+ MI R ++ D + VATD+ERI + C+ G D
Sbjct 56 IIPARFASTRFEGKPLVPILGKPMIQRTWERVMLASSLDHVVVATDDERIAECCRGFGAD 115
Query 65 VVLTSPDHPSGTDRLSEVARLKGWSEDDIIVNVQGDEPLLPATLVQQVAELLVAKPNCSM 124
V++TS +G++R E + K DI+VN+QGDEPL+ ++ V L P+
Sbjct 116 VIMTSASCKNGSERCCEALK-KLDKHYDIVVNIQGDEPLIEPEIIDGVVMSLQRAPDAVF 174
Query 125 STLCEPIHTLDEFQRDSIVKVVMSQYQEALYFSRATIPYDRDAAQTQQSSRFEHAY-RHL 183
ST + D F + VK V+ A+YFSR IP+++ ++ ++ Y HL
Sbjct 175 STAVTSLKPEDAFDTNR-VKCVVDNLGYAIYFSRGLIPFNKSG-----NANPKYPYLLHL 228
Query 184 GLYAYRVGLLQEYVAWQQGVLEKLESLEQLRVLENGHRIAIALAEVNLPPGVDTPADLER 243
G+ + L+ Y L+ E LEQL+VLENG+R+ + + + GVD P D+E+
Sbjct 229 GIAGFDSKFLKIYPELPPTPLQMEEDLEQLKVLENGYRMKVIKVDHD-AHGVDAPEDVEK 287
Query 244 LNALPRS 250
+ AL R+
Sbjct 288 IEALMRT 294
>B0B9T2 3-deoxy-manno-octulosonate cytidylyltransferase [Chlamydia
trachomatis serovar L2 (strain 434/Bu / ATCC VR-902B)]
Length=254
Score = 137 bits (346), Expect = 5e-43
Identities = 85/243 (35%), Positives = 127/243 (52%), Gaps = 15/243 (6%)
Query 5 VIPARFSSTRLPGKPLLEIHGRAMILRVVDQAKKVQGFDDLCVATDNERIMQLCQAEGVD 64
++P+R+ S+R PGKPL +I G+ ++ R + A Q D + VATD++RI G
Sbjct 12 ILPSRWGSSRFPGKPLAKILGKTLVQRSYENALSSQSLDCVVVATDDQRIFDHVVEFGGL 71
Query 65 VVLTSPDHPSGTDRLSEVARLKGWSEDDIIVNVQGDEPLLPATLVQQVAELLVAKPNCSM 124
V+TS +GT+R+ EV + + + +I+VN+QGDEP L T++ + L P M
Sbjct 72 CVMTSTSCANGTERVEEVVS-RHFPQAEIVVNIQGDEPCLSPTVIDGLVSTLENNPAADM 130
Query 125 STLCEPIHTLDEFQRDSIVKVVMSQYQEALYFSRATIPYDRDAAQTQQSSRFEH---AYR 181
T + D VK V + +ALYFSR+ IP++ F+H Y
Sbjct 131 VTPVTETTDPEAILTDHKVKCVFDKNGKALYFSRSAIPHN-----------FKHPTPIYL 179
Query 182 HLGLYAYRVGLLQEYVAWQQGVLEKLESLEQLRVLENGHRIAIALAEVNLPPGVDTPADL 241
H+G+YA+R L EYV L E LEQLRVLE G I + + + P VD P D+
Sbjct 180 HIGVYAFRKAFLSEYVKIPPSSLSLAEDLEQLRVLETGRSIYVHVVQNATGPSVDYPEDI 239
Query 242 ERL 244
++
Sbjct 240 TKV 242
>P42215 3-deoxy-manno-octulosonate cytidylyltransferase [Escherichia
coli]
Length=72
Score = 64.7 bits (156), Expect = 4e-17
Identities = 32/65 (49%), Positives = 47/65 (72%), Gaps = 0/65 (0%)
Query 4 IVIPARFSSTRLPGKPLLEIHGRAMILRVVDQAKKVQGFDDLCVATDNERIMQLCQAEGV 63
IVIPAR+ S+RLPGKPLL+I G+ MI V ++A +V G ++ VATD++R+ + QA G
Sbjct 6 IVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDQRVEKAVQAFGG 65
Query 64 DVVLT 68
++T
Sbjct 66 KAIMT 70
>P0A4V0 N-acylneuraminate cytidylyltransferase [Streptococcus
agalactiae serotype III (strain NEM316)]
Length=413
Score = 52.0 bits (123), Expect = 5e-11
Identities = 31/89 (35%), Positives = 48/89 (54%), Gaps = 4/89 (4%)
Query 5 VIPARFSSTRLPGKPLLEIHGRAMILRVVDQAKKVQGFD--DLCVATDNERIMQLCQAEG 62
+IPAR S LP K +L + G+ MI +D A + FD D+ V+TD+E ++C G
Sbjct 6 IIPARSGSKGLPDKNMLFLAGKPMIFHTIDAAIESGMFDKKDIFVSTDSELYREICLERG 65
Query 63 VDVVLTSPDHPSGTDRLSEVARLKGWSED 91
+ VV+ P+ TD+ + LK + D
Sbjct 66 ISVVMRKPE--LSTDQATSYDMLKDFLSD 92
>Q2M5Q2 Pseudaminic acid cytidylyltransferase [Campylobacter jejuni
subsp. jejuni serotype O:23/36 (strain 81-176)]
Length=232
Score = 40.0 bits (92), Expect = 3e-07
Identities = 29/125 (23%), Positives = 58/125 (46%), Gaps = 8/125 (6%)
Query 1 MKHI-VIPARFSSTRLPGKPLLEIHGRAMILRVVDQAKKVQGFDDLCVATDNERIMQLCQ 59
MK++ +IPAR S R+P K +++ G+ +I ++ A FD++ +++D+E I+++
Sbjct 1 MKNLCIIPARGGSKRIPRKNIIDFLGKPLIAYSIENALNSGIFDEIVLSSDDEEIIEVAL 60
Query 60 AEGVDVVLT-----SPDHPSGTDRLSEVARLKGWSED--DIIVNVQGDEPLLPATLVQQV 112
G S D+ S T + + D + + PLL +++Q
Sbjct 61 KYGAKAPFVRDKNLSDDYASSTAAVQNAIEILQSQNQIYDHVCCLYATAPLLNKNILKQA 120
Query 113 AELLV 117
E +
Sbjct 121 YEKFI 125
Score = 20.4 bits (41), Expect = 0.65
Identities = 9/24 (38%), Positives = 11/24 (46%), Gaps = 0/24 (0%)
Query 86 KGWSEDDIIVNVQGDEPLLPATLV 109
K W E+D I +LP LV
Sbjct 185 KAWLEEDFIFKPHSSVFVLPRNLV 208
>Q5ZXI0 CMP-N,N'-diacetyllegionaminic acid synthase [Legionella
pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC
33152 / DSM 7513)]
Length=232
Score = 37.0 bits (84), Expect = 3e-06
Identities = 20/61 (33%), Positives = 33/61 (54%), Gaps = 0/61 (0%)
Query 5 VIPARFSSTRLPGKPLLEIHGRAMILRVVDQAKKVQGFDDLCVATDNERIMQLCQAEGVD 64
VIPAR S RLPGK + G+ +I + A + +++ V+TD+++I + G
Sbjct 6 VIPARAGSKRLPGKNTRLLAGKPLIAHTIVAALQSSCCEEIVVSTDSKQIADVAVQYGAS 65
Query 65 V 65
V
Sbjct 66 V 66
Lambda K H a alpha
0.322 0.137 0.401 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 966207
Database: d71e06a58c174aed0f5067c69ab1b328.SwissProt.fasta
Posted date: May 20, 2024 4:58 AM
Number of letters in database: 5,613
Number of sequences in database: 22
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
