BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 5fca8325b7ba2ef6df9614738f09412f.SwissProt.fasta
           25 sequences; 8,598 total letters



Query= ACIAD2374

Length=315
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q6F9W1 tRNA dimethylallyltransferase [Acinetobacter baylyi (strai...  624     0.0   
B0V7B1 tRNA dimethylallyltransferase [Acinetobacter baumannii (st...  543     0.0   
A3M6J6 tRNA dimethylallyltransferase [Acinetobacter baumannii (st...  543     0.0   
B2HTT5 tRNA dimethylallyltransferase [Acinetobacter baumannii (st...  543     0.0   
B7IAP6 tRNA dimethylallyltransferase [Acinetobacter baumannii (st...  543     0.0   
B7H141 tRNA dimethylallyltransferase [Acinetobacter baumannii (st...  543     0.0   
B0VM64 tRNA dimethylallyltransferase [Acinetobacter baumannii (st...  542     0.0   
A5WDN1 tRNA dimethylallyltransferase [Psychrobacter sp. (strain P...  299     2e-103
Q3IDT9 tRNA dimethylallyltransferase [Pseudoalteromonas transluci...  295     8e-103
Q0I462 tRNA dimethylallyltransferase [Histophilus somni (strain 1...  288     5e-100
B0UUU6 tRNA dimethylallyltransferase [Histophilus somni (strain 2...  285     8e-99 
A4SR26 tRNA dimethylallyltransferase [Aeromonas salmonicida (stra...  282     9e-98 
A5UB70 tRNA dimethylallyltransferase [Haemophilus influenzae (str...  282     9e-98 
Q4QPH6 tRNA dimethylallyltransferase [Haemophilus influenzae (str...  282     9e-98 
Q15NR1 tRNA dimethylallyltransferase [Pseudoalteromonas atlantica...  282     1e-97 
P16384 tRNA dimethylallyltransferase [Escherichia coli (strain K12)]  265     5e-91 
Q9HUL9 tRNA dimethylallyltransferase [Pseudomonas aeruginosa (str...  265     6e-91 
P59197 tRNA dimethylallyltransferase [Shigella flexneri]              264     2e-90 
P37724 tRNA dimethylallyltransferase [Salmonella typhimurium (str...  254     2e-86 
P0A3Q6 tRNA dimethylallyltransferase [Rhizobium radiobacter]          152     3e-47 
Q9C5J6 tRNA dimethylallyltransferase 9 [Arabidopsis thaliana]         137     4e-40 
Q80UN9 tRNA dimethylallyltransferase [Mus musculus]                   120     4e-34 
Q9H3H1 tRNA dimethylallyltransferase [Homo sapiens]                   119     1e-33 
P07884 tRNA dimethylallyltransferase [Saccharomyces cerevisiae (s...  113     2e-31 
Q9ZUX7 tRNA dimethylallyltransferase 2 [Arabidopsis thaliana]         93.2    3e-24 


>Q6F9W1 tRNA dimethylallyltransferase [Acinetobacter baylyi (strain 
ATCC 33305 / BD413 / ADP1)]
Length=314

 Score = 624 bits (1610),  Expect = 0.0
 Identities = 314/314 (100%), Positives = 314/314 (100%), Gaps = 0/314 (0%)

Query  1    MSSTLPVINLMGPTASGKTALACELYERGHFELISVDSALIYKDMDIGTAKPTKEELALY  60
            MSSTLPVINLMGPTASGKTALACELYERGHFELISVDSALIYKDMDIGTAKPTKEELALY
Sbjct  1    MSSTLPVINLMGPTASGKTALACELYERGHFELISVDSALIYKDMDIGTAKPTKEELALY  60

Query  61   PHHLIDIITPLEVYSAAQFVEDATQLIDQIHMKGKTPILVGGTMLYFKSLLEGLSTNLPS  120
            PHHLIDIITPLEVYSAAQFVEDATQLIDQIHMKGKTPILVGGTMLYFKSLLEGLSTNLPS
Sbjct  61   PHHLIDIITPLEVYSAAQFVEDATQLIDQIHMKGKTPILVGGTMLYFKSLLEGLSTNLPS  120

Query  121  ADAEVRAAIEKQAEQEGWQSVYDELARVDPVAGARFKVSDRQRIIRAIEVYRLTGQPITK  180
            ADAEVRAAIEKQAEQEGWQSVYDELARVDPVAGARFKVSDRQRIIRAIEVYRLTGQPITK
Sbjct  121  ADAEVRAAIEKQAEQEGWQSVYDELARVDPVAGARFKVSDRQRIIRAIEVYRLTGQPITK  180

Query  181  LQAEQPKNVPYRYTFHNYALLPDRIELHKRIEQRLFKMWSIGFLNEVESLIKKYDLNDNL  240
            LQAEQPKNVPYRYTFHNYALLPDRIELHKRIEQRLFKMWSIGFLNEVESLIKKYDLNDNL
Sbjct  181  LQAEQPKNVPYRYTFHNYALLPDRIELHKRIEQRLFKMWSIGFLNEVESLIKKYDLNDNL  240

Query  241  PSMRSVGYRQALDFLLKSDMSHNNRREMEDKALFATRQLAKRQYTWLRSLQETHYFKTYL  300
            PSMRSVGYRQALDFLLKSDMSHNNRREMEDKALFATRQLAKRQYTWLRSLQETHYFKTYL
Sbjct  241  PSMRSVGYRQALDFLLKSDMSHNNRREMEDKALFATRQLAKRQYTWLRSLQETHYFKTYL  300

Query  301  TIKQAQEDLRNSYG  314
            TIKQAQEDLRNSYG
Sbjct  301  TIKQAQEDLRNSYG  314


>B0V7B1 tRNA dimethylallyltransferase [Acinetobacter baumannii 
(strain AYE)]
Length=314

 Score = 543 bits (1400),  Expect = 0.0
 Identities = 268/314 (85%), Positives = 294/314 (94%), Gaps = 0/314 (0%)

Query  1    MSSTLPVINLMGPTASGKTALACELYERGHFELISVDSALIYKDMDIGTAKPTKEELALY  60
            MS+ LPVINLMGPTASGKTALACELYERG+FELISVDSAL+YKDMDIGTAKPT+EE  LY
Sbjct  1    MSNQLPVINLMGPTASGKTALACELYERGNFELISVDSALVYKDMDIGTAKPTREEQELY  60

Query  61   PHHLIDIITPLEVYSAAQFVEDATQLIDQIHMKGKTPILVGGTMLYFKSLLEGLSTNLPS  120
            PHHLIDIITPLEVYSAAQFVEDA  LID++H +GKTPILVGGTMLYFK+LLEGLS+NLPS
Sbjct  61   PHHLIDIITPLEVYSAAQFVEDACALIDEMHSRGKTPILVGGTMLYFKALLEGLSSNLPS  120

Query  121  ADAEVRAAIEKQAEQEGWQSVYDELARVDPVAGARFKVSDRQRIIRAIEVYRLTGQPITK  180
            ADA VRAAIE++A  EGWQ+VYDEL  VDP AG +FKVSD+QRIIRA+EVYR+TGQPITK
Sbjct  121  ADANVRAAIEEKAANEGWQAVYDELVAVDPAAGVKFKVSDKQRIIRALEVYRITGQPITK  180

Query  181  LQAEQPKNVPYRYTFHNYALLPDRIELHKRIEQRLFKMWSIGFLNEVESLIKKYDLNDNL  240
            LQAEQPKNVPYRYTFHNYALLPDR+ELH+RIEQRL KMW IGFL+EVESLI+KYDL++NL
Sbjct  181  LQAEQPKNVPYRYTFHNYALLPDRLELHQRIEQRLSKMWDIGFLSEVESLIEKYDLDENL  240

Query  241  PSMRSVGYRQALDFLLKSDMSHNNRREMEDKALFATRQLAKRQYTWLRSLQETHYFKTYL  300
            PSMRSVGYRQAL+FLLKSDMS   ++EMEDKALFATRQLAKRQYTWLRSLQE H FKTYL
Sbjct  241  PSMRSVGYRQALEFLLKSDMSLKKKQEMEDKALFATRQLAKRQYTWLRSLQEIHDFKTYL  300

Query  301  TIKQAQEDLRNSYG  314
            TIKQA+EDLRNSYG
Sbjct  301  TIKQAKEDLRNSYG  314


>A3M6J6 tRNA dimethylallyltransferase [Acinetobacter baumannii 
(strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377)]
Length=314

 Score = 543 bits (1400),  Expect = 0.0
 Identities = 268/314 (85%), Positives = 294/314 (94%), Gaps = 0/314 (0%)

Query  1    MSSTLPVINLMGPTASGKTALACELYERGHFELISVDSALIYKDMDIGTAKPTKEELALY  60
            MS+ LPVINLMGPTASGKTALACELYERG+FELISVDSAL+YKDMDIGTAKPT+EE  LY
Sbjct  1    MSNQLPVINLMGPTASGKTALACELYERGNFELISVDSALVYKDMDIGTAKPTREEQELY  60

Query  61   PHHLIDIITPLEVYSAAQFVEDATQLIDQIHMKGKTPILVGGTMLYFKSLLEGLSTNLPS  120
            PHHLIDIITPLEVYSAAQFVEDA  LID++H +GKTPILVGGTMLYFK+LLEGLS+NLPS
Sbjct  61   PHHLIDIITPLEVYSAAQFVEDACALIDEMHSRGKTPILVGGTMLYFKALLEGLSSNLPS  120

Query  121  ADAEVRAAIEKQAEQEGWQSVYDELARVDPVAGARFKVSDRQRIIRAIEVYRLTGQPITK  180
            ADA VRAAIE++A  EGWQ+VYDEL  VDP AG +FKVSD+QRIIRA+EVYR+TGQPITK
Sbjct  121  ADANVRAAIEEKAANEGWQAVYDELVAVDPAAGVKFKVSDKQRIIRALEVYRITGQPITK  180

Query  181  LQAEQPKNVPYRYTFHNYALLPDRIELHKRIEQRLFKMWSIGFLNEVESLIKKYDLNDNL  240
            LQAEQPKNVPYRYTFHNYALLPDR+ELH+RIEQRL KMW IGFL+EVESLI+KYDL++NL
Sbjct  181  LQAEQPKNVPYRYTFHNYALLPDRLELHQRIEQRLSKMWDIGFLSEVESLIEKYDLDENL  240

Query  241  PSMRSVGYRQALDFLLKSDMSHNNRREMEDKALFATRQLAKRQYTWLRSLQETHYFKTYL  300
            PSMRSVGYRQAL+FLLKSDMS   ++EMEDKALFATRQLAKRQYTWLRSLQE H FKTYL
Sbjct  241  PSMRSVGYRQALEFLLKSDMSLKKKQEMEDKALFATRQLAKRQYTWLRSLQEIHDFKTYL  300

Query  301  TIKQAQEDLRNSYG  314
            TIKQA+EDLRNSYG
Sbjct  301  TIKQAKEDLRNSYG  314


>B2HTT5 tRNA dimethylallyltransferase [Acinetobacter baumannii 
(strain ACICU)]
Length=314

 Score = 543 bits (1400),  Expect = 0.0
 Identities = 268/314 (85%), Positives = 294/314 (94%), Gaps = 0/314 (0%)

Query  1    MSSTLPVINLMGPTASGKTALACELYERGHFELISVDSALIYKDMDIGTAKPTKEELALY  60
            MS+ LPVINLMGPTASGKTALACELYERG+FELISVDSAL+YKDMDIGTAKPT+EE  LY
Sbjct  1    MSNQLPVINLMGPTASGKTALACELYERGNFELISVDSALVYKDMDIGTAKPTREEQELY  60

Query  61   PHHLIDIITPLEVYSAAQFVEDATQLIDQIHMKGKTPILVGGTMLYFKSLLEGLSTNLPS  120
            PHHLIDIITPLEVYSAAQFVEDA  LID++H +GKTPILVGGTMLYFK+LLEGLS+NLPS
Sbjct  61   PHHLIDIITPLEVYSAAQFVEDACALIDEMHSRGKTPILVGGTMLYFKALLEGLSSNLPS  120

Query  121  ADAEVRAAIEKQAEQEGWQSVYDELARVDPVAGARFKVSDRQRIIRAIEVYRLTGQPITK  180
            ADA VRAAIE++A  EGWQ+VYDEL  VDP AG +FKVSD+QRIIRA+EVYR+TGQPITK
Sbjct  121  ADANVRAAIEEKAANEGWQAVYDELVAVDPAAGVKFKVSDKQRIIRALEVYRITGQPITK  180

Query  181  LQAEQPKNVPYRYTFHNYALLPDRIELHKRIEQRLFKMWSIGFLNEVESLIKKYDLNDNL  240
            LQAEQPKNVPYRYTFHNYALLPDR+ELH+RIEQRL KMW IGFL+EVESLI+KYDL++NL
Sbjct  181  LQAEQPKNVPYRYTFHNYALLPDRLELHQRIEQRLSKMWDIGFLSEVESLIEKYDLDENL  240

Query  241  PSMRSVGYRQALDFLLKSDMSHNNRREMEDKALFATRQLAKRQYTWLRSLQETHYFKTYL  300
            PSMRSVGYRQAL+FLLKSDMS   ++EMEDKALFATRQLAKRQYTWLRSLQE H FKTYL
Sbjct  241  PSMRSVGYRQALEFLLKSDMSLKKKQEMEDKALFATRQLAKRQYTWLRSLQEIHDFKTYL  300

Query  301  TIKQAQEDLRNSYG  314
            TIKQA+EDLRNSYG
Sbjct  301  TIKQAKEDLRNSYG  314


>B7IAP6 tRNA dimethylallyltransferase [Acinetobacter baumannii 
(strain AB0057)]
Length=314

 Score = 543 bits (1400),  Expect = 0.0
 Identities = 268/314 (85%), Positives = 294/314 (94%), Gaps = 0/314 (0%)

Query  1    MSSTLPVINLMGPTASGKTALACELYERGHFELISVDSALIYKDMDIGTAKPTKEELALY  60
            MS+ LPVINLMGPTASGKTALACELYERG+FELISVDSAL+YKDMDIGTAKPT+EE  LY
Sbjct  1    MSNQLPVINLMGPTASGKTALACELYERGNFELISVDSALVYKDMDIGTAKPTREEQELY  60

Query  61   PHHLIDIITPLEVYSAAQFVEDATQLIDQIHMKGKTPILVGGTMLYFKSLLEGLSTNLPS  120
            PHHLIDIITPLEVYSAAQFVEDA  LID++H +GKTPILVGGTMLYFK+LLEGLS+NLPS
Sbjct  61   PHHLIDIITPLEVYSAAQFVEDACALIDEMHSRGKTPILVGGTMLYFKALLEGLSSNLPS  120

Query  121  ADAEVRAAIEKQAEQEGWQSVYDELARVDPVAGARFKVSDRQRIIRAIEVYRLTGQPITK  180
            ADA VRAAIE++A  EGWQ+VYDEL  VDP AG +FKVSD+QRIIRA+EVYR+TGQPITK
Sbjct  121  ADANVRAAIEEKAANEGWQAVYDELVAVDPAAGVKFKVSDKQRIIRALEVYRITGQPITK  180

Query  181  LQAEQPKNVPYRYTFHNYALLPDRIELHKRIEQRLFKMWSIGFLNEVESLIKKYDLNDNL  240
            LQAEQPKNVPYRYTFHNYALLPDR+ELH+RIEQRL KMW IGFL+EVESLI+KYDL++NL
Sbjct  181  LQAEQPKNVPYRYTFHNYALLPDRLELHQRIEQRLSKMWDIGFLSEVESLIEKYDLDENL  240

Query  241  PSMRSVGYRQALDFLLKSDMSHNNRREMEDKALFATRQLAKRQYTWLRSLQETHYFKTYL  300
            PSMRSVGYRQAL+FLLKSDMS   ++EMEDKALFATRQLAKRQYTWLRSLQE H FKTYL
Sbjct  241  PSMRSVGYRQALEFLLKSDMSLKKKQEMEDKALFATRQLAKRQYTWLRSLQEIHDFKTYL  300

Query  301  TIKQAQEDLRNSYG  314
            TIKQA+EDLRNSYG
Sbjct  301  TIKQAKEDLRNSYG  314


>B7H141 tRNA dimethylallyltransferase [Acinetobacter baumannii 
(strain AB307-0294)]
Length=314

 Score = 543 bits (1400),  Expect = 0.0
 Identities = 268/314 (85%), Positives = 294/314 (94%), Gaps = 0/314 (0%)

Query  1    MSSTLPVINLMGPTASGKTALACELYERGHFELISVDSALIYKDMDIGTAKPTKEELALY  60
            MS+ LPVINLMGPTASGKTALACELYERG+FELISVDSAL+YKDMDIGTAKPT+EE  LY
Sbjct  1    MSNQLPVINLMGPTASGKTALACELYERGNFELISVDSALVYKDMDIGTAKPTREEQELY  60

Query  61   PHHLIDIITPLEVYSAAQFVEDATQLIDQIHMKGKTPILVGGTMLYFKSLLEGLSTNLPS  120
            PHHLIDIITPLEVYSAAQFVEDA  LID++H +GKTPILVGGTMLYFK+LLEGLS+NLPS
Sbjct  61   PHHLIDIITPLEVYSAAQFVEDACALIDEMHSRGKTPILVGGTMLYFKALLEGLSSNLPS  120

Query  121  ADAEVRAAIEKQAEQEGWQSVYDELARVDPVAGARFKVSDRQRIIRAIEVYRLTGQPITK  180
            ADA VRAAIE++A  EGWQ+VYDEL  VDP AG +FKVSD+QRIIRA+EVYR+TGQPITK
Sbjct  121  ADANVRAAIEEKAANEGWQAVYDELVAVDPAAGVKFKVSDKQRIIRALEVYRITGQPITK  180

Query  181  LQAEQPKNVPYRYTFHNYALLPDRIELHKRIEQRLFKMWSIGFLNEVESLIKKYDLNDNL  240
            LQAEQPKNVPYRYTFHNYALLPDR+ELH+RIEQRL KMW IGFL+EVESLI+KYDL++NL
Sbjct  181  LQAEQPKNVPYRYTFHNYALLPDRLELHQRIEQRLSKMWDIGFLSEVESLIEKYDLDENL  240

Query  241  PSMRSVGYRQALDFLLKSDMSHNNRREMEDKALFATRQLAKRQYTWLRSLQETHYFKTYL  300
            PSMRSVGYRQAL+FLLKSDMS   ++EMEDKALFATRQLAKRQYTWLRSLQE H FKTYL
Sbjct  241  PSMRSVGYRQALEFLLKSDMSLKKKQEMEDKALFATRQLAKRQYTWLRSLQEIHDFKTYL  300

Query  301  TIKQAQEDLRNSYG  314
            TIKQA+EDLRNSYG
Sbjct  301  TIKQAKEDLRNSYG  314


>B0VM64 tRNA dimethylallyltransferase [Acinetobacter baumannii 
(strain SDF)]
Length=314

 Score = 542 bits (1396),  Expect = 0.0
 Identities = 267/314 (85%), Positives = 293/314 (93%), Gaps = 0/314 (0%)

Query  1    MSSTLPVINLMGPTASGKTALACELYERGHFELISVDSALIYKDMDIGTAKPTKEELALY  60
            MS+ LPVINLMGPTASGKTALACELYERG+FELISVDSAL+YKDMDIGTAKPT+EE  LY
Sbjct  1    MSNQLPVINLMGPTASGKTALACELYERGNFELISVDSALVYKDMDIGTAKPTREEQELY  60

Query  61   PHHLIDIITPLEVYSAAQFVEDATQLIDQIHMKGKTPILVGGTMLYFKSLLEGLSTNLPS  120
            PHHLIDIITPLEVYSAAQFVEDA  LID++H +GKTPILVGGTMLYFK+LLEGLS+NLPS
Sbjct  61   PHHLIDIITPLEVYSAAQFVEDACALIDEMHSRGKTPILVGGTMLYFKALLEGLSSNLPS  120

Query  121  ADAEVRAAIEKQAEQEGWQSVYDELARVDPVAGARFKVSDRQRIIRAIEVYRLTGQPITK  180
            ADA VRAAIE++A  EGWQ+VYDEL  VDP AG +FKVSD+QRIIRA+EVY +TGQPITK
Sbjct  121  ADANVRAAIEEKAANEGWQAVYDELVAVDPAAGVKFKVSDKQRIIRALEVYHITGQPITK  180

Query  181  LQAEQPKNVPYRYTFHNYALLPDRIELHKRIEQRLFKMWSIGFLNEVESLIKKYDLNDNL  240
            LQAEQPKNVPYRYTFHNYALLPDR+ELH+RIEQRL KMW IGFL+EVESLI+KYDL++NL
Sbjct  181  LQAEQPKNVPYRYTFHNYALLPDRVELHQRIEQRLSKMWDIGFLSEVESLIEKYDLDENL  240

Query  241  PSMRSVGYRQALDFLLKSDMSHNNRREMEDKALFATRQLAKRQYTWLRSLQETHYFKTYL  300
            PSMRSVGYRQAL+FLLKSDMS   ++EMEDKALFATRQLAKRQYTWLRSLQE H FKTYL
Sbjct  241  PSMRSVGYRQALEFLLKSDMSLKKKQEMEDKALFATRQLAKRQYTWLRSLQEIHDFKTYL  300

Query  301  TIKQAQEDLRNSYG  314
            TIKQA+EDLRNSYG
Sbjct  301  TIKQAKEDLRNSYG  314


>A5WDN1 tRNA dimethylallyltransferase [Psychrobacter sp. (strain 
PRwf-1)]
Length=365

 Score = 299 bits (765),  Expect = 2e-103
 Identities = 162/330 (49%), Positives = 218/330 (66%), Gaps = 31/330 (9%)

Query  7    VINLMGPTASGKTALACELYERGHFELISVDSALIYKDMDIGTAKPTKEELALYPHHLID  66
            V+ LM PTASGKT+LA ELYE G FE+ISVDSALIYKDM+IGTAKPT+ EL  YPHHL+D
Sbjct  18   VVCLMAPTASGKTSLAYELYETGRFEIISVDSALIYKDMNIGTAKPTQSELEQYPHHLVD  77

Query  67   IITPLEVYSAAQFVEDATQLIDQIHMKGKTPILVGGTMLYFKSLLEGLSTNLPSADAEVR  126
            II P + YS A FV D  QL++QIH +GKTP+LVGGT++Y+ +L  GLS  +P  D  VR
Sbjct  78   IIDPTQSYSVANFVSDTQQLVEQIHQRGKTPLLVGGTLMYYMALFNGLSP-IPDTDPNVR  136

Query  127  AAIEKQAEQEGWQSVYDELARVDPVAGARFKVSDRQRIIRAIEVYRLTGQPITKLQAEQP  186
            A +E Q +Q+G ++++D L+++DP    R  + D QRI RAIEVY+ TG+P++  Q + P
Sbjct  137  AQVEAQRQQQGIEALHDYLSKIDPPLAERLPIGDTQRITRAIEVYQQTGKPLSYWQ-QLP  195

Query  187  KNV----PYRYTFHNYALLPDRIELHKRIEQRLFKMWSIGFLNEVESLIKKYDLNDNLPS  242
            K      P +Y +   A++PDR  LH+RI  RL  MW+ GF +EV  L+  Y L+  +PS
Sbjct  196  KQALSDNPQQY-WLGLAVMPDRAWLHERIALRLEMMWADGFFDEVGQLLTNYSLDAQMPS  254

Query  243  MRSVGYRQALDFLLKSD-----------MSHNNR-------------REMEDKALFATRQ  278
            MR VGYRQ +D+L+ +D            S +N+             ++M++KAL+ATRQ
Sbjct  255  MRCVGYRQVIDYLIATDHPLISRLKINGQSVDNKGLEVNEAHKSIACQDMKNKALYATRQ  314

Query  279  LAKRQYTWLRSLQETHYFKTYLTIKQAQED  308
            LAKRQYTWLR+L  +H     L    AQ +
Sbjct  315  LAKRQYTWLRNLVASHQPSDTLQTSGAQTE  344


>Q3IDT9 tRNA dimethylallyltransferase [Pseudoalteromonas translucida 
(strain TAC 125)]
Length=306

 Score = 295 bits (755),  Expect = 8e-103
 Identities = 161/299 (54%), Positives = 206/299 (69%), Gaps = 8/299 (3%)

Query  1    MSSTLPVINLMGPTASGKTALACELYERGHFELISVDSALIYKDMDIGTAKPTKEELALY  60
            M S LPVI LMGPTA+GKTALA  L E  + E+ISVDSAL+YK MDIGTAKP   ELA  
Sbjct  1    MLSNLPVIFLMGPTAAGKTALAISLCEHLNTEIISVDSALVYKGMDIGTAKPDASELARA  60

Query  61   PHHLIDIITPLEVYSAAQFVEDATQLIDQIHMKGKTPILVGGTMLYFKSLLEGLSTNLPS  120
            PHHLID++ P E YS A F  DA   ID+ H +GK P+LVGGTMLYFK+L++GLS  LP 
Sbjct  61   PHHLIDLLDPSETYSVADFRRDAIIKIDEFHQQGKVPVLVGGTMLYFKALIDGLSP-LPE  119

Query  121  ADAEVRAAIEKQAEQEGWQSVYDELARVDPVAGARFKVSDRQRIIRAIEVYRLTGQPITK  180
            A+ E+RA +E QA Q GW  +Y EL ++DP A  +   +D QRI RA+EVY+LTG+ +T+
Sbjct  120  ANVEIRAELEAQAAQYGWPHLYQELVKIDPQAAQKMSENDSQRINRALEVYKLTGKTMTE  179

Query  181  LQAEQPKNVPYRYTFHNYALLP-DRIELHKRIEQRLFKMWSIGFLNEVESLIKKYDLNDN  239
            LQ ++   +P  YTFH +A+ P  R ELH+RIE+R   M   GF NEV +L  + DL+ N
Sbjct  180  LQKQKQPVLP--YTFHQFAIAPTQRSELHQRIEKRFKIMLEQGFENEVSTLYLRKDLHPN  237

Query  240  LPSMRSVGYRQALDFLLKSDMSHNNRREMEDKALFATRQLAKRQYTWLRSLQETHYFKT  298
            +PS+R VGYRQ  D+ L  ++ H+   EM  + + ATRQLAKRQ TWLRS  +  +  T
Sbjct  238  MPSIRCVGYRQMWDY-LAGEIDHD---EMVFRGIAATRQLAKRQLTWLRSWPDVTWLTT  292


>Q0I462 tRNA dimethylallyltransferase [Histophilus somni (strain 
129Pt)]
Length=311

 Score = 288 bits (737),  Expect = 5e-100
 Identities = 160/309 (52%), Positives = 211/309 (68%), Gaps = 7/309 (2%)

Query  1    MSSTLPVINLMGPTASGKTALACELYERGHFELISVDSALIYKDMDIGTAKPTKEELALY  60
            M+     I LMGPTASGKT LA +L++    E+ISVDSALIYK MDIGTAKP  +ELAL 
Sbjct  1    MNKKSTAIFLMGPTASGKTDLAIQLHQELPVEVISVDSALIYKGMDIGTAKPNAQELALT  60

Query  61   PHHLIDIITPLEVYSAAQFVEDATQLIDQIHMKGKTPILVGGTMLYFKSLLEGLSTNLPS  120
            PH LIDI  P E YSAA+F  DA Q + +I  +GK P+LVGGTMLY+K+LLEGLS  LPS
Sbjct  61   PHRLIDIKDPSENYSAAEFRHDALQEMQKITQQGKIPLLVGGTMLYYKALLEGLSP-LPS  119

Query  121  ADAEVRAAIEKQAEQEGWQSVYDELARVDPVAGARFKVSDRQRIIRAIEVYRLTGQPITK  180
            AD +VR  IE++AE+ GW ++++ELA++DP++  R   +D QRI RA+EV+ LTGQ +T+
Sbjct  120  ADEKVRLEIEQKAEKFGWATLHNELAKIDPISAQRINPNDSQRINRALEVFYLTGQSLTE  179

Query  181  LQAEQPKNVPYRYTFHNYALLPDRIELHKRIEQRLFKMWSIGFLNEVESLIKKYDLNDNL  240
            L A++ K +PY      +A+ PDR  LH+RIEQR  KM   GF  EVE L ++ DL+ NL
Sbjct  180  LTAQKGKEIPYHII--QFAIAPDRAVLHQRIEQRFHKMIEQGFQQEVEKLYQRSDLHPNL  237

Query  241  PSMRSVGYRQALDFLLKSDMSHNNRREMEDKALFATRQLAKRQYTWLRSLQETHYFKTYL  300
            PS+R VGYRQ  ++L      + ++ EM  + + ATRQLAKRQ TWLR  +    +   L
Sbjct  238  PSIRCVGYRQMWEYL----QGNYDKDEMIFRGICATRQLAKRQLTWLRGWKSPIEWLDSL  293

Query  301  TIKQAQEDL  309
              K  +E +
Sbjct  294  NPKSTKEKI  302


>B0UUU6 tRNA dimethylallyltransferase [Histophilus somni (strain 
2336)]
Length=311

 Score = 285 bits (729),  Expect = 8e-99
 Identities = 158/309 (51%), Positives = 212/309 (69%), Gaps = 7/309 (2%)

Query  1    MSSTLPVINLMGPTASGKTALACELYERGHFELISVDSALIYKDMDIGTAKPTKEELALY  60
            M+     I LMGPTASGKT LA +L++    E+ISVDSALIYK MDIGTAKP  +ELAL 
Sbjct  1    MNKKSTAIFLMGPTASGKTDLAIQLHQELPVEVISVDSALIYKGMDIGTAKPNAQELALT  60

Query  61   PHHLIDIITPLEVYSAAQFVEDATQLIDQIHMKGKTPILVGGTMLYFKSLLEGLSTNLPS  120
            PH LIDI  P E YSAA+F  DA + + +I  +GK P+LVGGTMLY+K+LLEGLS  LPS
Sbjct  61   PHRLIDIKDPSENYSAAEFRRDALREMQKITQQGKIPLLVGGTMLYYKALLEGLSP-LPS  119

Query  121  ADAEVRAAIEKQAEQEGWQSVYDELARVDPVAGARFKVSDRQRIIRAIEVYRLTGQPITK  180
            AD +VR  IE++AE+ GW ++++ELA++DP++  R   +D QRI RA+EV+ LTGQ +T+
Sbjct  120  ADEKVRLEIEQKAEKFGWATLHNELAKIDPISAQRINPNDSQRINRALEVFYLTGQSLTE  179

Query  181  LQAEQPKNVPYRYTFHNYALLPDRIELHKRIEQRLFKMWSIGFLNEVESLIKKYDLNDNL  240
            L A++ + +PY     ++A+ P+R  LH+RIEQR  KM   GF  EVE L ++ DL+ NL
Sbjct  180  LTAQKGEEIPYHII--HFAIAPERAVLHQRIEQRFHKMIEQGFQQEVEKLYQRSDLHPNL  237

Query  241  PSMRSVGYRQALDFLLKSDMSHNNRREMEDKALFATRQLAKRQYTWLRSLQETHYFKTYL  300
            PS+R VGYRQ  ++L      +  + EM  + + ATRQLAKRQ TWLR  +    +   L
Sbjct  238  PSIRCVGYRQMWEYL----QGNYGKDEMIFRGICATRQLAKRQLTWLRGWKSPIEWLDSL  293

Query  301  TIKQAQEDL  309
              K A+E +
Sbjct  294  NPKSAKEKI  302


>A4SR26 tRNA dimethylallyltransferase [Aeromonas salmonicida (strain 
A449)]
Length=310

 Score = 282 bits (722),  Expect = 9e-98
 Identities = 157/292 (54%), Positives = 206/292 (71%), Gaps = 8/292 (3%)

Query  8    INLMGPTASGKTALACELYERGHFELISVDSALIYKDMDIGTAKPTKEELALYPHHLIDI  67
            I LMGPTASGKT LA  L +    ++ISVDSALIY+ MDIGTAKPT +ELAL PH LIDI
Sbjct  10   IFLMGPTASGKTDLAIALCQTLPCDIISVDSALIYRGMDIGTAKPTAQELALAPHKLIDI  69

Query  68   ITPLEVYSAAQFVEDATQLIDQIHMKGKTPILVGGTMLYFKSLLEGLSTNLPSADAEVRA  127
            I P   YSAA F  DA + ++ I  +G+ P+LVGGTMLYFK+LLEGLS  LPSAD  +RA
Sbjct  70   IDPALSYSAADFCRDALREMNDIVARGRIPLLVGGTMLYFKALLEGLSP-LPSADPAIRA  128

Query  128  AIEKQAEQEGWQSVYDELARVDPVAGARFKVSDRQRIIRAIEVYRLTGQPITKLQAEQPK  187
             +E++A + GWQ+++DEL R+DPVAGAR   +D QR+ RA+EVYR++G+ +T+L   Q +
Sbjct  129  ELEEEAARLGWQALHDELVRIDPVAGARIHPNDPQRLSRALEVYRISGKTLTELTQVQGE  188

Query  188  NVPYRYTFHNYALLP-DRIELHKRIEQRLFKMWSIGFLNEVESLIKKYDLNDNLPSMRSV  246
             +PYR   H +A+ P DR  LHKRIEQR  KM   GF  EV +L ++ DL  +LP++R V
Sbjct  189  GLPYR--VHQFAIAPSDRALLHKRIEQRFDKMLQSGFEQEVRALYERGDLTPHLPAIRCV  246

Query  247  GYRQALDFLLKSDMSHNNRREMEDKALFATRQLAKRQYTWLRSLQETHYFKT  298
            GYRQ  D+ L  ++ ++   EM  + + ATRQLAKRQ TWLR   E  + ++
Sbjct  247  GYRQMWDY-LAGEVEYD---EMRYRGIVATRQLAKRQMTWLRGWPEVTWLES  294


>A5UB70 tRNA dimethylallyltransferase [Haemophilus influenzae 
(strain PittEE)]
Length=311

 Score = 282 bits (722),  Expect = 9e-98
 Identities = 161/301 (53%), Positives = 209/301 (69%), Gaps = 8/301 (3%)

Query  8    INLMGPTASGKTALACELYERGHFELISVDSALIYKDMDIGTAKPTKEELALYPHHLIDI  67
            I LMGPTASGKT LA +L      E+ISVDSALIYK MDIGTAKP+KEELAL PH LIDI
Sbjct  6    IFLMGPTASGKTDLAIQLRSSLPVEVISVDSALIYKGMDIGTAKPSKEELALAPHRLIDI  65

Query  68   ITPLEVYSAAQFVEDATQLIDQIHMKGKTPILVGGTMLYFKSLLEGLSTNLPSADAEVRA  127
            + P E YSA  F +DA + +  I  +GK P+LVGGTMLY+K+L+EGLS  LPSAD  +RA
Sbjct  66   LDPSESYSAMNFRDDALREMADITAQGKIPLLVGGTMLYYKALIEGLSP-LPSADENIRA  124

Query  128  AIEKQAEQEGWQSVYDELARVDPVAGARFKVSDRQRIIRAIEVYRLTGQPITKLQAEQPK  187
             +E++A Q+GW +++ ELA++DP++ AR   SD QRI RA+EV+ +TG+ +T+L  E+ +
Sbjct  125  ELEQKAAQQGWAALHTELAKIDPMSAARINPSDSQRINRALEVFYITGKSLTELTEEKGE  184

Query  188  NVPYRYTFHNYALLP-DRIELHKRIEQRLFKMWSIGFLNEVESLIKKYDLNDNLPSMRSV  246
             +P  Y F  +A+ P DR  LH+RIEQR  KM  +GF  EVE L  + DLN NLPS+R V
Sbjct  185  ALP--YDFVQFAIAPQDRHVLHERIEQRFHKMIELGFQEEVEKLYTRGDLNINLPSIRCV  242

Query  247  GYRQALDFLLKSDMSHNNRREMEDKALFATRQLAKRQYTWLRSLQETHYFKTYLTIKQAQ  306
            GYRQ  ++ L+ D  H    EM  + + ATRQLAKRQ TWLR  +    +   L  +QA+
Sbjct  243  GYRQMWEY-LQGDYDH---EEMIFRGICATRQLAKRQLTWLRGWKTPIQWLDSLQPQQAK  298

Query  307  E  307
            E
Sbjct  299  E  299


>Q4QPH6 tRNA dimethylallyltransferase [Haemophilus influenzae 
(strain 86-028NP)]
Length=311

 Score = 282 bits (722),  Expect = 9e-98
 Identities = 161/301 (53%), Positives = 209/301 (69%), Gaps = 8/301 (3%)

Query  8    INLMGPTASGKTALACELYERGHFELISVDSALIYKDMDIGTAKPTKEELALYPHHLIDI  67
            I LMGPTASGKT LA +L      E+ISVDSALIYK MDIGTAKP+KEELAL PH LIDI
Sbjct  6    IFLMGPTASGKTDLAIQLRSSLPVEVISVDSALIYKGMDIGTAKPSKEELALAPHRLIDI  65

Query  68   ITPLEVYSAAQFVEDATQLIDQIHMKGKTPILVGGTMLYFKSLLEGLSTNLPSADAEVRA  127
            + P E YSA  F +DA + +  I  +GK P+LVGGTMLY+K+L+EGLS  LPSAD  +RA
Sbjct  66   LDPSESYSAMNFRDDALREMADITAQGKIPLLVGGTMLYYKALIEGLSP-LPSADENIRA  124

Query  128  AIEKQAEQEGWQSVYDELARVDPVAGARFKVSDRQRIIRAIEVYRLTGQPITKLQAEQPK  187
             +E++A Q+GW +++ ELA++DP++ AR   SD QRI RA+EV+ +TG+ +T+L  E+ +
Sbjct  125  ELEQKAAQQGWAALHTELAKIDPISAARINPSDSQRINRALEVFYITGKSLTELTEEKGE  184

Query  188  NVPYRYTFHNYALLP-DRIELHKRIEQRLFKMWSIGFLNEVESLIKKYDLNDNLPSMRSV  246
             +P  Y F  +A+ P DR  LH+RIEQR  KM  +GF  EVE L  + DLN NLPS+R V
Sbjct  185  ALP--YDFVQFAIAPQDRHVLHERIEQRFHKMIELGFQAEVEKLYARGDLNINLPSIRCV  242

Query  247  GYRQALDFLLKSDMSHNNRREMEDKALFATRQLAKRQYTWLRSLQETHYFKTYLTIKQAQ  306
            GYRQ  ++ L+ D  H    EM  + + ATRQLAKRQ TWLR  +    +   L  +QA+
Sbjct  243  GYRQMWEY-LQGDYDH---EEMIFRGICATRQLAKRQLTWLRGWKTPIQWLDSLQPQQAK  298

Query  307  E  307
            E
Sbjct  299  E  299


>Q15NR1 tRNA dimethylallyltransferase [Pseudoalteromonas atlantica 
(strain T6c / ATCC BAA-1087)]
Length=315

 Score = 282 bits (721),  Expect = 1e-97
 Identities = 157/295 (53%), Positives = 201/295 (68%), Gaps = 8/295 (3%)

Query  6    PVINLMGPTASGKTALACELYERGHFELISVDSALIYKDMDIGTAKPTKEELALYPHHLI  65
            P I LMGPTASGKTALA EL +    E+ISVDSALIYK MDIGTAKPT EELA  PH LI
Sbjct  12   PAILLMGPTASGKTALAIELCQALPCEIISVDSALIYKGMDIGTAKPTAEELAQAPHRLI  71

Query  66   DIITPLEVYSAAQFVEDATQLIDQIHMKGKTPILVGGTMLYFKSLLEGLSTNLPSADAEV  125
            DI+ P++ YS A+F  DA   +  I  +G+ P+LVGGTM+Y+K+L +GLST LP AD  V
Sbjct  72   DILDPVQSYSVAEFRRDALAAMQDITQRGRIPLLVGGTMMYYKALTDGLST-LPQADPLV  130

Query  126  RAAIEKQAEQEGWQSVYDELARVDPVAGARFKVSDRQRIIRAIEVYRLTGQPITKLQAEQ  185
            RA IEKQAE+ GWQ+++ EL  +DPV+  R   +D QR+ RA+E+YR++G+ +T+L   +
Sbjct  131  RAEIEKQAEKNGWQALHQELQGIDPVSAQRIHPNDPQRLSRALEIYRISGKSMTELSLNK  190

Query  186  PKNVPYRYTFHNYALLP-DRIELHKRIEQRLFKMWSIGFLNEVESLIKKYDLNDNLPSMR  244
              + PY+  F  +A+ P DR  LH RI QR   M + GF +EV  L  + DL+ +LPSMR
Sbjct  191  QPSAPYQ--FSQFAIAPSDRHILHDRIAQRFDIMLNSGFEDEVIELKSRADLHLDLPSMR  248

Query  245  SVGYRQALDFLLKSDMSHNNRREMEDKALFATRQLAKRQYTWLRSLQETHYFKTY  299
             VGYRQ   +L       N  +EM +K L ATRQLAKRQ TWLRS Q  H+  T+
Sbjct  249  CVGYRQMWQYL----DGENIYQEMREKGLAATRQLAKRQLTWLRSWQNLHWLDTF  299


>P16384 tRNA dimethylallyltransferase [Escherichia coli (strain 
K12)]
Length=316

 Score = 265 bits (678),  Expect = 5e-91
 Identities = 155/295 (53%), Positives = 202/295 (68%), Gaps = 9/295 (3%)

Query  3    STLP-VINLMGPTASGKTALACELYERGHFELISVDSALIYKDMDIGTAKPTKEELALYP  61
            ++LP  I LMGPTASGKTALA EL +    ELISVDSALIYK MDIGTAKP  EEL   P
Sbjct  7    ASLPKAIFLMGPTASGKTALAIELRKILPVELISVDSALIYKGMDIGTAKPNAEELLAAP  66

Query  62   HHLIDIITPLEVYSAAQFVEDATQLIDQIHMKGKTPILVGGTMLYFKSLLEGLSTNLPSA  121
            H L+DI  P + YSAA F  DA   +  I   G+ P+LVGGTMLYFK+LLEGLS  LPSA
Sbjct  67   HRLLDIRDPSQAYSAADFRRDALAEMADITAAGRIPLLVGGTMLYFKALLEGLSP-LPSA  125

Query  122  DAEVRAAIEKQAEQEGWQSVYDELARVDPVAGARFKVSDRQRIIRAIEVYRLTGQPITKL  181
            D EVRA IE+QA ++GW+S++ +L  VDPVA AR   +D QR+ RA+EV+ ++G+ +T+L
Sbjct  126  DPEVRARIEQQAAEQGWESLHRQLQEVDPVAAARIHPNDPQRLSRALEVFFISGKTLTEL  185

Query  182  QAEQPKNVPYRYTFHNYALLP-DRIELHKRIEQRLFKMWSIGFLNEVESLIKKYDLNDNL  240
                   +PY+   H +A+ P  R  LH+RIEQR  +M + GF  EV +L  + DL+ +L
Sbjct  186  TQTSGDALPYQ--VHQFAIAPASRELLHQRIEQRFHQMLASGFEAEVRALFARGDLHTDL  243

Query  241  PSMRSVGYRQALDFLLKSDMSHNNRREMEDKALFATRQLAKRQYTWLRSLQETHY  295
            PS+R VGYRQ   + L+ ++S++   EM  + + ATRQLAKRQ TWLR  +  H+
Sbjct  244  PSIRCVGYRQMWSY-LEGEISYD---EMVYRGVCATRQLAKRQITWLRGWEGVHW  294


>Q9HUL9 tRNA dimethylallyltransferase [Pseudomonas aeruginosa 
(strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 
12228 / 1C / PRS 101 / PAO1)]
Length=323

 Score = 265 bits (678),  Expect = 6e-91
 Identities = 154/305 (50%), Positives = 202/305 (66%), Gaps = 15/305 (5%)

Query  1    MSSTLPVINLMGPTASGKTALACELYERGHFELISVDSALIYKDMDIGTAKPTKEELALY  60
            MSS  P I LMGPTA+GKT LA  L +    ELISVDSALIY+ MDIGTAKP++E LA Y
Sbjct  1    MSSLPPAIFLMGPTAAGKTDLAMALADALPCELISVDSALIYRGMDIGTAKPSRELLARY  60

Query  61   PHHLIDIITPLEVYSAAQFVEDATQLIDQIHMKGKTPILVGGTMLYFKSLLEGLSTNLPS  120
            PH LIDI  P E YSAA+F  DA   + +   +G+ P+LVGGTMLY+K+LLEGL+ ++P 
Sbjct  61   PHRLIDIRDPAESYSAAEFRADALAAMAKATARGRIPLLVGGTMLYYKALLEGLA-DMPG  119

Query  121  ADAEVRAAIEKQAEQEGWQSVYDELARVDPVAGARFKVSDRQRIIRAIEVYRLTGQPITK  180
            AD EVRAAIE +A+ EGW++++ +LA VDP + AR   +D QR++RA+EVYRL G  ++ 
Sbjct  120  ADPEVRAAIEAEAQAEGWEALHRQLAEVDPESAARIHPNDPQRLMRALEVYRLGGVSMSD  179

Query  181  LQAEQPKNV---------PYRYTFHNYALLPD-RIELHKRIEQRLFKMWSIGFLNEVESL  230
            L+  Q                YT    A+ P+ R  LH RI QR  +M   GF+ EVE+L
Sbjct  180  LRRRQSAEKADFDASGRNQLPYTVAQLAIAPEQRQVLHARIAQRFRQMLEQGFIAEVEAL  239

Query  231  IKKYDLNDNLPSMRSVGYRQALDFLLKSDMSHNNRREMEDKALFATRQLAKRQYTWLRSL  290
              + DL+  LPS+R+VGYRQ  D+ L   +S+    EM ++ + ATRQLAKRQ+TWLRS 
Sbjct  240  HARSDLHAGLPSIRAVGYRQVWDY-LDGKLSY---AEMTERGIIATRQLAKRQFTWLRSW  295

Query  291  QETHY  295
               H+
Sbjct  296  SHLHW  300


>P59197 tRNA dimethylallyltransferase [Shigella flexneri]
Length=316

 Score = 264 bits (674),  Expect = 2e-90
 Identities = 154/295 (52%), Positives = 201/295 (68%), Gaps = 9/295 (3%)

Query  3    STLP-VINLMGPTASGKTALACELYERGHFELISVDSALIYKDMDIGTAKPTKEELALYP  61
            ++LP  I LMGPTASGKTALA EL +    ELISVDS LIYK MDIGTAKP  EEL   P
Sbjct  7    ASLPKAIFLMGPTASGKTALAIELRKILPVELISVDSVLIYKGMDIGTAKPNAEELLAAP  66

Query  62   HHLIDIITPLEVYSAAQFVEDATQLIDQIHMKGKTPILVGGTMLYFKSLLEGLSTNLPSA  121
            H L+DI  P + YSAA F  DA   +  I   G+ P+LVGGTMLYFK+LLEGLS  LPSA
Sbjct  67   HRLLDIRDPSQAYSAADFRRDALAEMADITAAGRIPLLVGGTMLYFKALLEGLSP-LPSA  125

Query  122  DAEVRAAIEKQAEQEGWQSVYDELARVDPVAGARFKVSDRQRIIRAIEVYRLTGQPITKL  181
            D EVRA IE+QA ++GW+S++ +L  VDPVA AR   +D QR+ RA+EV+ ++G+ +T+L
Sbjct  126  DPEVRARIEQQAAEQGWESLHRQLQEVDPVAAARIHPNDPQRLSRALEVFFISGKTLTEL  185

Query  182  QAEQPKNVPYRYTFHNYALLP-DRIELHKRIEQRLFKMWSIGFLNEVESLIKKYDLNDNL  240
                   +PY+   H +A+ P  R  LH+RIEQR  +M + GF  EV +L  + DL+ +L
Sbjct  186  TQTSGDALPYQ--VHQFAIAPASRELLHQRIEQRFHQMLASGFEAEVRALFARGDLHTDL  243

Query  241  PSMRSVGYRQALDFLLKSDMSHNNRREMEDKALFATRQLAKRQYTWLRSLQETHY  295
            PS+R VGYRQ   + L+ ++S++   EM  + + ATRQLAKRQ TWLR  +  H+
Sbjct  244  PSIRCVGYRQMWSY-LEGEISYD---EMVYRGVCATRQLAKRQITWLRGWEGVHW  294


>P37724 tRNA dimethylallyltransferase [Salmonella typhimurium 
(strain LT2 / SGSC1412 / ATCC 700720)]
Length=316

 Score = 254 bits (648),  Expect = 2e-86
 Identities = 147/288 (51%), Positives = 198/288 (69%), Gaps = 9/288 (3%)

Query  3    STLP-VINLMGPTASGKTALACELYERGHFELISVDSALIYKDMDIGTAKPTKEELALYP  61
            ++LP  I LMGPTASGKTALA EL +    ELISVDSALIY+ MDIGTAKP  +EL   P
Sbjct  7    ASLPKAIFLMGPTASGKTALAIELRKVLPVELISVDSALIYRGMDIGTAKPNADELKAAP  66

Query  62   HHLIDIITPLEVYSAAQFVEDATQLIDQIHMKGKTPILVGGTMLYFKSLLEGLSTNLPSA  121
            H L+DI  P + YSAA F  DA   + +I   G+ P+LVGGTMLYFK+LLEGLS  LPSA
Sbjct  67   HRLLDIRDPSQAYSAADFRRDALAQMAEITAAGRIPLLVGGTMLYFKALLEGLSP-LPSA  125

Query  122  DAEVRAAIEKQAEQEGWQSVYDELARVDPVAGARFKVSDRQRIIRAIEVYRLTGQPITKL  181
            D EVR+ IE+QA + GW++++ +L  +DPVA AR   +D QR+ RA+EV+ ++G+ +T+L
Sbjct  126  DPEVRSRIEQQAAELGWEALHQQLQEIDPVAAARIHPNDPQRLSRALEVFFISGKTLTEL  185

Query  182  QAEQPKNVPYRYTFHNYALLP-DRIELHKRIEQRLFKMWSIGFLNEVESLIKKYDLNDNL  240
                   +PY+   H +A+ P  R  LH+RIE R  +M + GF  EV +L  + DL+ +L
Sbjct  186  TQTSGDALPYQ--VHQFAIAPASRELLHQRIELRFHQMLASGFEAEVRALFARGDLHTDL  243

Query  241  PSMRSVGYRQALDFLLKSDMSHNNRREMEDKALFATRQLAKRQYTWLR  288
            PS+R VGYRQ   + ++ ++S++   EM  + + ATRQLAKRQ TWLR
Sbjct  244  PSIRCVGYRQMWSY-IEGEISYD---EMVYRGVCATRQLAKRQMTWLR  287


>P0A3Q6 tRNA dimethylallyltransferase [Rhizobium radiobacter]
Length=298

 Score = 152 bits (384),  Expect = 3e-47
 Identities = 93/289 (32%), Positives = 150/289 (52%), Gaps = 6/289 (2%)

Query  1    MSSTLPVINLMGPTASGKTALACELYERGHFELISVDSALIYKDMDIGTAKPTKEELALY  60
            +      I + GPTASGK+ALA  L    +  +I+ DS  +Y  + + TA+P+  E+   
Sbjct  5    LDQNFDAILITGPTASGKSALALRLARERNGVVINADSMQVYDTLRVLTARPSDHEMEGV  64

Query  61   PHHLIDIITPLEVYSAAQFVEDATQLIDQIHMKGKTPILVGGTMLYFKSLLEGLSTNLPS  120
            PH L   +     YS  +++ D + L+  +  +G+ P++VGGT LYFK+L  GLS ++P+
Sbjct  65   PHRLYGHVPAGSAYSTGEWLRDISGLLSDLRGEGRFPVIVGGTGLYFKALTGGLS-DMPA  123

Query  121  ADAEVRAAIEKQAEQEGWQSVYDELARVDPVAGARFKVSDRQRIIRAIEVYRLTGQPITK  180
               ++R  +  +  +EG   ++ EL   DP      +  D QRI+RA+EV   TG+ I  
Sbjct  124  IPDDLREGLRARLIEEGAAKLHAELVSRDPSMAQMLQPGDGQRIVRALEVLEATGKSIRD  183

Query  181  LQAEQPKNVPYRYTFHNYALLPDRIELHKRIEQRLFKMWSIGFLNEVESLIKKYDLNDNL  240
             Q      +        + +LP+R  LH RI +R   M   G + EV++L+   +L  + 
Sbjct  184  FQRASGPMIIDPERAQKFIVLPERPVLHDRINRRFEAMMDSGAVEEVQALL-ALNLAPDA  242

Query  241  PSMRSVGYRQALDFLLKSDMSHNNRREMEDKALFATRQLAKRQYTWLRS  289
             +M+++G  Q  D L           E+ +K+  ATRQ AKRQ TW R+
Sbjct  243  TAMKAIGVAQIADML----TGRMGAAEVIEKSAAATRQYAKRQMTWFRN  287


>Q9C5J6 tRNA dimethylallyltransferase 9 [Arabidopsis thaliana]
Length=463

 Score = 137 bits (345),  Expect = 4e-40
 Identities = 104/347 (30%), Positives = 164/347 (47%), Gaps = 43/347 (12%)

Query  7    VINLMGPTASGKTALACELYERGHFELISVDSALIYKDMDIGTAKPTKEELALYPHHLID  66
            VI + GPT +GK+ LA EL +R + E+IS DS  +YK +D+G+AKP+  +  + PHHLID
Sbjct  52   VIVISGPTGAGKSRLAMELAKRLNGEIISADSVQVYKGLDVGSAKPSDSDRKVVPHHLID  111

Query  67   IITPLEVYSAAQFVEDATQLIDQIHMKGKTPILVGGTMLYFKSLLEGLSTNLPSADAEVR  126
            I+ P + YS  QF +D  Q    I  +G+ PI+ GGT LY +  + G   ++P    EV 
Sbjct  112  ILHPSQDYSVGQFYDDGRQATKDILNRGRVPIVTGGTGLYLRWFMYG-KPDVPKPSPEVI  170

Query  127  AAIEKQAEQEGWQSVYDELARVDPVAGA------RFKVSDRQRIIRAIEVYRLTGQPITK  180
            A  E      G+Q+ Y+  A V+ V  A          +D  R+ R++E+ + TG P + 
Sbjct  171  A--EAHDMLVGFQTEYNWDAAVELVVNAGDPKASSLPRNDWYRLRRSLEILKSTGSPPSS  228

Query  181  LQ---------------------------AEQPKNVPYRYTFHNYALLPDRIELHKRIEQ  213
             +                           + Q       Y F  + L   R+ L++ I+ 
Sbjct  229  FRIPYDSFRVNLVAPDADDFLEDGSSADISIQNIETDLDYDFLCFFLSSPRVALYRSIDF  288

Query  214  RLFKMWS--IGFLNEVESLIKKYDLNDNLPSMRSVGYRQALDFLLKSDMSHNNRREME--  269
            R   M S   G L+E   L+    L ++ P+ R++GYRQA+++LL+           E  
Sbjct  289  RCEDMLSGPNGVLSEARWLLDLGLLPNSNPATRAIGYRQAMEYLLQCRRYEGESSPREFY  348

Query  270  ---DKALFATRQLAKRQYTWLRSLQETHYFKTYLTIKQAQEDLRNSY  313
               +K   A+R  AKRQ TW R     H+      +    + + ++Y
Sbjct  349  AFLNKFQTASRNFAKRQMTWFRCEPMYHWLNASKPLDSILQCIYDAY  395


>Q80UN9 tRNA dimethylallyltransferase [Mus musculus]
Length=467

 Score = 120 bits (302),  Expect = 4e-34
 Identities = 88/312 (28%), Positives = 163/312 (52%), Gaps = 28/312 (9%)

Query  4    TLPVINLMGPTASGKTALACELYERGHFELISVDSALIYKDMDIGTAKPTKEELALYPHH  63
            TLP++ ++G T +GK+ LA +L +R   E++S DS  +Y+ +DI T K + +E  +  HH
Sbjct  22   TLPLVVILGATGTGKSTLALQLGQRLGGEIVSADSMQVYEGLDIITNKVSAQEQKMCQHH  81

Query  64   LIDIITPLEV-YSAAQFVEDATQLIDQIHMKGKTPILVGGTMLYFKSLL-EGLSTNLPSA  121
            +I  + PL   Y+   F   AT LI+ I  + K PI+VGGT  Y +SLL + L T  P  
Sbjct  82   MISFVDPLVTSYTVVDFRNKATALIEDIFARDKIPIVVGGTNYYIESLLWKVLITTKPQE  141

Query  122  DAEVRAAIEK-QAEQEGWQSVYDELARVDPVAGARFKVSDRQRIIRAIEVYRLTG----Q  176
                +    K + E+E    ++  L++VDP   A+    D++++ R+++V+  TG    +
Sbjct  142  MGTGKVVDRKVELEKEDGHELHKRLSQVDPEMAAKLHPHDKRKVARSLQVFEETGISHSE  201

Query  177  PITKLQAEQ---PKNVPYRYTFHNYALL---PDRIELHKRIEQRLFKMWSIGFLNEVESL  230
             + +  AE+   P   P R  F N  +L    D+  L +R+++R+  M + G L E+   
Sbjct  202  FLHRQHAEEGGGPLGGPLR--FPNPCILWLHADQAVLDERLDKRVDDMLAAGLLEELRGF  259

Query  231  IKKYDLNDNLPS--------MRSVGYRQALDFL-LKSDMSHNNRREMEDKALFATRQLAK  281
             ++Y+L +   +         +S+G+++  ++L  +   +     ++  K + A +Q+ K
Sbjct  260  HRRYNLKNISENSQDYQHGIFQSIGFKEFHEYLTTEGKCTPETSNQLLKKGIEALKQVTK  319

Query  282  R----QYTWLRS  289
            R    Q  W+++
Sbjct  320  RYARKQNRWVKN  331


>Q9H3H1 tRNA dimethylallyltransferase [Homo sapiens]
Length=467

 Score = 119 bits (298),  Expect = 1e-33
 Identities = 84/315 (27%), Positives = 163/315 (52%), Gaps = 28/315 (9%)

Query  1    MSSTLPVINLMGPTASGKTALACELYERGHFELISVDSALIYKDMDIGTAKPTKEELALY  60
            +  TLP++ ++G T +GK+ LA +L +R   E++S DS  +Y+ +DI T K + +E  + 
Sbjct  19   LQRTLPLVVILGATGTGKSTLALQLGQRLGGEIVSADSMQVYEGLDIITNKVSAQEQRIC  78

Query  61   PHHLIDIITPLEV-YSAAQFVEDATQLIDQIHMKGKTPILVGGTMLYFKSLLEGLSTNLP  119
             HH+I  + PL   Y+   F   AT LI+ I  + K PI+VGGT  Y +SLL  +  N  
Sbjct  79   RHHMISFVDPLVTNYTVVDFRNRATALIEDIFARDKIPIVVGGTNYYIESLLWKVLVNTK  138

Query  120  SADAEVRAAIEK--QAEQEGWQSVYDELARVDPVAGARFKVSDRQRIIRAIEVYRLTGQP  177
              +      I++  + E+E    ++  L++VDP   A+    D++++ R+++V+  TG  
Sbjct  139  PQEMGTEKVIDRKVELEKEDGLVLHKRLSQVDPEMAAKLHPHDKRKVARSLQVFEETGIS  198

Query  178  ITKLQAEQ-------PKNVPYRYTFHNYALL---PDRIELHKRIEQRLFKMWSIGFLNEV  227
             ++    Q       P   P +  F N  +L    D+  L +R+++R+  M + G L E+
Sbjct  199  HSEFLHRQHTEEGGGPLGGPLK--FSNPCILWLHADQAVLDERLDKRVDDMLAAGLLEEL  256

Query  228  ESLIKKY---DLNDNLPS-----MRSVGYRQALDFLL-KSDMSHNNRREMEDKALFATRQ  278
                ++Y   ++++N         +S+G+++  ++L+ +   +     ++  K + A +Q
Sbjct  257  RDFHRRYNQKNVSENSQDYQHGIFQSIGFKEFHEYLITEGKCTLETSNQLLKKGIEALKQ  316

Query  279  LAKR----QYTWLRS  289
            + KR    Q  W+++
Sbjct  317  VTKRYARKQNRWVKN  331


>P07884 tRNA dimethylallyltransferase [Saccharomyces cerevisiae 
(strain ATCC 204508 / S288c)]
Length=428

 Score = 113 bits (282),  Expect = 2e-31
 Identities = 79/291 (27%), Positives = 145/291 (50%), Gaps = 10/291 (3%)

Query  7    VINLMGPTASGKTALACELYERGHFELISVDSALIYKDMDIGTAKPTKEELALYPHHLID  66
            VI + G T  GK+ L+ +L ++ + E+I+ DS  +YKD+ I T K   +E    PHH+++
Sbjct  16   VIVIAGTTGVGKSQLSIQLAQKFNGEVINSDSMQVYKDIPIITNKHPLQEREGIPHHVMN  75

Query  67   IITPLEVYSAAQFVEDATQLIDQIHMKGKTPILVGGTMLYFKSLLEGLSTNLPSADAEVR  126
             +   E Y + +F  +    I+ IH +GK PI+VGGT  Y ++L      +  S++ ++ 
Sbjct  76   HVDWSEEYYSHRFETECMNAIEDIHRRGKIPIVVGGTHYYLQTLF-NKRVDTKSSERKLT  134

Query  127  AAIEKQAEQEGWQSVYDELARVDPVAGARFKVSDRQRIIRAIEVYRLTGQPITKLQAEQP  186
                   E      +Y+ L + DP    ++  +D +R+ R +E+Y  TG+  ++   EQ 
Sbjct  135  RKQLDILESTDPDVIYNTLVKCDPDIATKYHPNDYRRVQRMLEIYYKTGKKPSETFNEQK  194

Query  187  KNVPYRYTFHNYALLPDRIELHKRIEQRLFKMWSIGFLNEVESLIKKYDLNDNLPSM---  243
              + +   F      P+   L +R++ R+  M   G L E++ L + Y  N   P     
Sbjct  195  ITLKFDTLFLWLYSKPE--PLFQRLDDRVDDMLERGALQEIKQLYEYYSQNKFTPEQCEN  252

Query  244  ---RSVGYRQALDFLL-KSDMSHNNRREMEDKALFATRQLAKRQYTWLRSL  290
               + +G+++ L +L  K+D +     +  ++    TRQ AKRQ  W++ +
Sbjct  253  GVWQVIGFKEFLPWLTGKTDDNTVKLEDCIERMKTRTRQYAKRQVKWIKKM  303


>Q9ZUX7 tRNA dimethylallyltransferase 2 [Arabidopsis thaliana]
Length=466

 Score = 93.2 bits (230),  Expect = 3e-24
 Identities = 76/272 (28%), Positives = 129/272 (47%), Gaps = 19/272 (7%)

Query  1    MSSTLPVINLMGPTASGKTALACELYERGHFELISVDSALIYKDMDIGTAKPTKEELALY  60
            M     V+ +MGPT SGK+ LA +L      E+I+ D+  IY  +D+ T K T +E    
Sbjct  16   MKKKAKVVVIMGPTGSGKSKLAVDLASHFPVEIINADAMQIYSGLDVLTNKVTVDEQKGV  75

Query  61   PHHLIDIITPLEVYSAAQFVEDATQLIDQIHMKGKTPILVGGTMLYF-----KSLLEGLS  115
            PHHL+  ++    ++A  F +    LI++I  +   P+LVGGT  Y      K LL+  +
Sbjct  76   PHHLLGTVSSDMEFTARDFRDFTVPLIEEIVSRNHIPVLVGGTHYYIQAVVSKFLLDDAA  135

Query  116  TNLPSADAEVRAAIEKQAEQEG------WQSVYDELARVDPVAGARFKVSDRQRIIRAIE  169
             +     A+V + +++    E           Y+ L  +DPVA  R   ++ ++I + + 
Sbjct  136  EDTEECCADVASVVDQDMVVESVFGRDDLSHGYELLKELDPVAANRIHPNNHRKINQYLS  195

Query  170  VYRLTGQPITKL-QAEQPKN----VPYRYTFHNYALLPDRIELHKRIEQRLFKMWSIGFL  224
            ++   G   +KL Q +  +N       R+ +    +  +   L + +EQR+  M   G L
Sbjct  196  LHASRGVLPSKLYQGKTAENWGCINASRFDYCLICMDAETAVLDRYVEQRVDAMVDAGLL  255

Query  225  NEVESLIKK-YDLNDNLPSMRSVGYRQALDFL  255
            +EV  + K   D    L   +S+G R+  DFL
Sbjct  256  DEVYDIYKPGADYTRGL--RQSIGVREFEDFL  285



Lambda      K        H        a         alpha
   0.321    0.135    0.391    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 1947220


  Database: 5fca8325b7ba2ef6df9614738f09412f.SwissProt.fasta
    Posted date:  May 20, 2024  8:04 PM
  Number of letters in database: 8,598
  Number of sequences in database:  25



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40