BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: e5f524e5244dd57ce8207a08b6c2cd4a.TrEMBL.fasta
20 sequences; 2,308 total letters
Query= ACIAD2398
Length=118
Score E
Sequences producing significant alignments: (Bits) Value
A0A7G2SGD9 Transcriptional regulator [Acinetobacter sp] 234 2e-85
Q6F9U0 Transcriptional regulator [Acinetobacter baylyi (strain AT... 233 4e-85
N9BVU4 Copper-sensing transcriptional repressor CsoR [Acinetobact... 143 4e-49
A0A427M3Q5 Transcriptional regulator [Acinetobacter soli] 143 4e-49
A0A4Q9R3A6 Transcriptional regulator [Stutzerimonas kirkiae] 141 1e-48
A0A7L5RR69 Metal-sensitive transcriptional regulator [Pseudomonas... 141 1e-48
A0A1G8E8P9 DNA-binding transcriptional regulator, FrmR family [Ps... 141 2e-48
A0A1P8EFI8 Transcriptional regulator [Acinetobacter soli] 141 2e-48
A0A240EDF2 DNA-binding transcriptional regulator, FrmR family [Ac... 141 3e-48
A0A0M1I7Q7 Transcriptional regulator [Acinetobacter sp. C15] 139 9e-48
A0A2U1UD22 Transcriptional regulator [Brenneria sp. CFCC 11842] 135 3e-46
A4INJ9 Copper-sensing transcriptional repressor CsoR [Geobacillus... 82.4 2e-25
D6EK73 Uncharacterized protein [Streptomyces lividans TK24] 68.6 1e-19
Q55554 Sll0176 protein [Synechocystis sp. (strain PCC 6803 / Kazu... 67.8 4e-19
Q5SHL1 Copper-sensing transcriptional repressor CsoR [Thermus the... 51.2 2e-13
Q06VT2 NcrB [Leptospirillum ferriphilum] 47.4 6e-12
Q1KLR1 NcrB [Serratia marcescens] 47.0 8e-12
Q6RUG2 NirB [Klebsiella oxytoca] 47.0 8e-12
C1JGW2 Metal-sensitive transcriptional regulator [Oenococcus oeni] 45.8 2e-11
A0A0H3NLH8 Transcriptional repressor FrmR [Salmonella typhimurium... 44.7 7e-11
>A0A7G2SGD9 Transcriptional regulator [Acinetobacter sp]
Length=131
Score = 234 bits (598), Expect = 2e-85
Identities = 117/117 (100%), Positives = 117/117 (100%), Gaps = 0/117 (0%)
Query 1 VQAEGSNDPSKRCDDCNNEVSDDLHMSQKHVIQPDKKALLNRLSRIGGQVNGVAQMVEND 60
VQAEGSNDPSKRCDDCNNEVSDDLHMSQKHVIQPDKKALLNRLSRIGGQVNGVAQMVEND
Sbjct 15 VQAEGSNDPSKRCDDCNNEVSDDLHMSQKHVIQPDKKALLNRLSRIGGQVNGVAQMVEND 74
Query 61 RYCVDILTQISAIRSALDSVSTQLLNHHVQGCVRRAVVEDGGEEVIGELLMLIKKMR 117
RYCVDILTQISAIRSALDSVSTQLLNHHVQGCVRRAVVEDGGEEVIGELLMLIKKMR
Sbjct 75 RYCVDILTQISAIRSALDSVSTQLLNHHVQGCVRRAVVEDGGEEVIGELLMLIKKMR 131
>Q6F9U0 Transcriptional regulator [Acinetobacter baylyi (strain
ATCC 33305 / BD413 / ADP1)]
Length=117
Score = 233 bits (595), Expect = 4e-85
Identities = 116/117 (99%), Positives = 117/117 (100%), Gaps = 0/117 (0%)
Query 1 VQAEGSNDPSKRCDDCNNEVSDDLHMSQKHVIQPDKKALLNRLSRIGGQVNGVAQMVEND 60
+QAEGSNDPSKRCDDCNNEVSDDLHMSQKHVIQPDKKALLNRLSRIGGQVNGVAQMVEND
Sbjct 1 MQAEGSNDPSKRCDDCNNEVSDDLHMSQKHVIQPDKKALLNRLSRIGGQVNGVAQMVEND 60
Query 61 RYCVDILTQISAIRSALDSVSTQLLNHHVQGCVRRAVVEDGGEEVIGELLMLIKKMR 117
RYCVDILTQISAIRSALDSVSTQLLNHHVQGCVRRAVVEDGGEEVIGELLMLIKKMR
Sbjct 61 RYCVDILTQISAIRSALDSVSTQLLNHHVQGCVRRAVVEDGGEEVIGELLMLIKKMR 117
>N9BVU4 Copper-sensing transcriptional repressor CsoR [Acinetobacter
soli NIPH 2899]
Length=128
Score = 143 bits (360), Expect = 4e-49
Identities = 76/116 (66%), Positives = 90/116 (78%), Gaps = 2/116 (2%)
Query 2 QAEGSNDPSKRCDDCNNEVSDDLHMSQKHVIQPDKKALLNRLSRIGGQVNGVAQMVENDR 61
+A+ S PS C C + S K VIQP KKALLNRLSR+ GQVNGV+QM+ENDR
Sbjct 15 EADSSTQPSA-CMQCETSETQT-GQSPKQVIQPHKKALLNRLSRVQGQVNGVSQMIENDR 72
Query 62 YCVDILTQISAIRSALDSVSTQLLNHHVQGCVRRAVVEDGGEEVIGELLMLIKKMR 117
YCVDI+TQISAIRSALD+VS QLL+ HV+GCVRRAV++D +EV+ ELL LIKKMR
Sbjct 73 YCVDIITQISAIRSALDAVSRQLLDDHVKGCVRRAVLDDNTDEVMDELLTLIKKMR 128
>A0A427M3Q5 Transcriptional regulator [Acinetobacter soli]
Length=128
Score = 143 bits (360), Expect = 4e-49
Identities = 76/116 (66%), Positives = 90/116 (78%), Gaps = 2/116 (2%)
Query 2 QAEGSNDPSKRCDDCNNEVSDDLHMSQKHVIQPDKKALLNRLSRIGGQVNGVAQMVENDR 61
+A+ S PS C C + S K VIQP KKALLNRLSR+ GQVNGV+QM+ENDR
Sbjct 15 EADSSTQPSA-CMQCETSETQT-GQSPKQVIQPHKKALLNRLSRVQGQVNGVSQMIENDR 72
Query 62 YCVDILTQISAIRSALDSVSTQLLNHHVQGCVRRAVVEDGGEEVIGELLMLIKKMR 117
YCVDI+TQISAIRSALD+VS QLL+ HV+GCVRRAV++D +EV+ ELL LIKKMR
Sbjct 73 YCVDIITQISAIRSALDAVSRQLLDDHVKGCVRRAVLDDNTDEVMDELLTLIKKMR 128
>A0A4Q9R3A6 Transcriptional regulator [Stutzerimonas kirkiae]
Length=123
Score = 141 bits (356), Expect = 1e-48
Identities = 71/106 (67%), Positives = 84/106 (79%), Gaps = 3/106 (3%)
Query 12 RCDDCNNEVSDDLHMSQKHVIQPDKKALLNRLSRIGGQVNGVAQMVENDRYCVDILTQIS 71
RC C D + K V+QP KKALLNRLSRIGGQVNG+AQM+E DRYCVDILTQ+S
Sbjct 21 RCAHCE---PDTATVDGKSVVQPRKKALLNRLSRIGGQVNGIAQMIEKDRYCVDILTQVS 77
Query 72 AIRSALDSVSTQLLNHHVQGCVRRAVVEDGGEEVIGELLMLIKKMR 117
A+RSALD+V++QLL H GCVR+A++EDGGEE I ELL +IKKMR
Sbjct 78 AVRSALDAVASQLLADHANGCVRQAILEDGGEEAITELLGIIKKMR 123
>A0A7L5RR69 Metal-sensitive transcriptional regulator [Pseudomonas
sp. ABC1]
Length=125
Score = 141 bits (356), Expect = 1e-48
Identities = 75/118 (64%), Positives = 88/118 (75%), Gaps = 5/118 (4%)
Query 2 QAEGSNDPSK--RCDDCNNEVSDDLHMSQKHVIQPDKKALLNRLSRIGGQVNGVAQMVEN 59
QA PS+ RC C D K V+QP KKALLNRLSRIGGQVNG+AQM+E
Sbjct 11 QAATGASPSEAPRCAHCE---PDTTTADGKTVVQPRKKALLNRLSRIGGQVNGIAQMIEK 67
Query 60 DRYCVDILTQISAIRSALDSVSTQLLNHHVQGCVRRAVVEDGGEEVIGELLMLIKKMR 117
DRYCVDILTQ+SA+RSALD+V++QLL H GCVR+A++EDGGEE I ELL +IKKMR
Sbjct 68 DRYCVDILTQVSAVRSALDAVASQLLADHANGCVRQAILEDGGEEAITELLGIIKKMR 125
>A0A1G8E8P9 DNA-binding transcriptional regulator, FrmR family
[Pseudomonas flavescens]
Length=118
Score = 141 bits (355), Expect = 2e-48
Identities = 72/105 (69%), Positives = 83/105 (79%), Gaps = 5/105 (5%)
Query 13 CDDCNNEVSDDLHMSQKHVIQPDKKALLNRLSRIGGQVNGVAQMVENDRYCVDILTQISA 72
C C S D K V+QP KKALLNRLSRIGGQVNG+AQMVE DRYCVDILTQ+SA
Sbjct 19 CVQCAPTASTD-----KSVVQPRKKALLNRLSRIGGQVNGIAQMVEKDRYCVDILTQVSA 73
Query 73 IRSALDSVSTQLLNHHVQGCVRRAVVEDGGEEVIGELLMLIKKMR 117
+RSALD+V++QLL H GCVR+A++EDGGEE I ELL +IKKMR
Sbjct 74 VRSALDAVASQLLADHASGCVRKAILEDGGEEAITELLGIIKKMR 118
>A0A1P8EFI8 Transcriptional regulator [Acinetobacter soli]
Length=128
Score = 141 bits (355), Expect = 2e-48
Identities = 76/116 (66%), Positives = 90/116 (78%), Gaps = 2/116 (2%)
Query 2 QAEGSNDPSKRCDDCNNEVSDDLHMSQKHVIQPDKKALLNRLSRIGGQVNGVAQMVENDR 61
+A+ S PS C C + S K VIQP KKALLNRLSR+ GQVNGV+QM+ENDR
Sbjct 15 EADSSTQPSA-CMQCETSETQT-GQSPKLVIQPHKKALLNRLSRVQGQVNGVSQMIENDR 72
Query 62 YCVDILTQISAIRSALDSVSTQLLNHHVQGCVRRAVVEDGGEEVIGELLMLIKKMR 117
YCVDI+TQISAIRSALD+VS QLL+ HV+GCVRRAV++D +EV+ ELL LIKKMR
Sbjct 73 YCVDIITQISAIRSALDAVSRQLLDDHVKGCVRRAVLDDNIDEVMDELLTLIKKMR 128
>A0A240EDF2 DNA-binding transcriptional regulator, FrmR family
[Acinetobacter puyangensis]
Length=133
Score = 141 bits (355), Expect = 3e-48
Identities = 73/112 (65%), Positives = 90/112 (80%), Gaps = 4/112 (4%)
Query 7 NDPSKRCDDC-NNEVSDDLHMSQKHVIQPDKKALLNRLSRIGGQVNGVAQMVENDRYCVD 65
+ P+ +C C + ++ DD + K VIQP KKA+LNRLSRI GQVNGV++MVE DRYC+D
Sbjct 25 SSPAVQCVHCADQQIVDD---AGKIVIQPHKKAILNRLSRIAGQVNGVSRMVEKDRYCID 81
Query 66 ILTQISAIRSALDSVSTQLLNHHVQGCVRRAVVEDGGEEVIGELLMLIKKMR 117
ILTQISA+RSALD+VSTQLL H GCVR+AV+EDGGE+ I ELL +IKKMR
Sbjct 82 ILTQISAVRSALDAVSTQLLADHTNGCVRKAVLEDGGEDAITELLNIIKKMR 133
>A0A0M1I7Q7 Transcriptional regulator [Acinetobacter sp. C15]
Length=128
Score = 139 bits (351), Expect = 9e-48
Identities = 70/91 (77%), Positives = 81/91 (89%), Gaps = 0/91 (0%)
Query 27 SQKHVIQPDKKALLNRLSRIGGQVNGVAQMVENDRYCVDILTQISAIRSALDSVSTQLLN 86
S K VIQP KKALLNRLSR+ GQVNGV+QM+ENDRYCVDI+TQISAIRSALD+VS QLL+
Sbjct 38 SPKQVIQPHKKALLNRLSRVQGQVNGVSQMIENDRYCVDIITQISAIRSALDAVSRQLLD 97
Query 87 HHVQGCVRRAVVEDGGEEVIGELLMLIKKMR 117
HV+GCVRRAV++D +EV+ ELL LIKKMR
Sbjct 98 DHVKGCVRRAVLDDNTDEVMDELLTLIKKMR 128
Score = 16.2 bits (30), Expect = 2.2
Identities = 6/11 (55%), Positives = 8/11 (73%), Gaps = 0/11 (0%)
Query 14 DDCNNEVSDDL 24
DD +EV D+L
Sbjct 110 DDNTDEVMDEL 120
>A0A2U1UD22 Transcriptional regulator [Brenneria sp. CFCC 11842]
Length=114
Score = 135 bits (340), Expect = 3e-46
Identities = 67/111 (60%), Positives = 90/111 (81%), Gaps = 3/111 (3%)
Query 10 SKRCDDC--NNEVSDDLHM-SQKHVIQPDKKALLNRLSRIGGQVNGVAQMVENDRYCVDI 66
S++C+ C ++E ++++ + ++ V+QP KKALLNRLSRI GQVNG+AQM+E DRYCVDI
Sbjct 4 SRKCEFCAASDEAANNVDVHDERRVVQPRKKALLNRLSRINGQVNGIAQMIEQDRYCVDI 63
Query 67 LTQISAIRSALDSVSTQLLNHHVQGCVRRAVVEDGGEEVIGELLMLIKKMR 117
L QISA RSAL++V+ QLL H GCVR+AV+EDGGEE I ELL +I++MR
Sbjct 64 LNQISAARSALNAVANQLLADHTNGCVRKAVLEDGGEEAIAELLQVIQRMR 114
>A4INJ9 Copper-sensing transcriptional repressor CsoR [Geobacillus
thermodenitrificans (strain NG80-2)]
Length=105
Score = 82.4 bits (202), Expect = 2e-25
Identities = 40/77 (52%), Positives = 55/77 (71%), Gaps = 0/77 (0%)
Query 39 LLNRLSRIGGQVNGVAQMVENDRYCVDILTQISAIRSALDSVSTQLLNHHVQGCVRRAVV 98
++ RL RI GQV GV +MVE++RYC+DIL QISAI++AL V QLL H CV +A+
Sbjct 26 IMKRLKRIEGQVRGVQKMVEDNRYCIDILVQISAIQAALRQVGMQLLERHANHCVAKAIR 85
Query 99 EDGGEEVIGELLMLIKK 115
E GE+ + EL+ +IK+
Sbjct 86 EGSGEQSLRELMDVIKQ 102
>D6EK73 Uncharacterized protein [Streptomyces lividans TK24]
Length=133
Score = 68.6 bits (166), Expect = 1e-19
Identities = 37/97 (38%), Positives = 54/97 (56%), Gaps = 1/97 (1%)
Query 7 NDPSKRCDDCNNEVSDDLHMSQKHVIQPDKKALLNRLSRIGGQVNGVAQMVENDRYCVDI 66
N +++ + ++ D H H K L RL RI GQ+ G+ +MV+ D YC+DI
Sbjct 20 NQTARQAEADGTDIVTD-HDRGVHGYHKQKAEHLKRLRRIEGQIRGLQRMVDEDVYCIDI 78
Query 67 LTQISAIRSALDSVSTQLLNHHVQGCVRRAVVEDGGE 103
LTQ+SA AL S + QLL H++ CV A ++ G E
Sbjct 79 LTQVSASTKALQSFALQLLEEHLRHCVADAALKGGTE 115
>Q55554 Sll0176 protein [Synechocystis sp. (strain PCC 6803 /
Kazusa)]
Length=167
Score = 67.8 bits (164), Expect = 4e-19
Identities = 32/77 (42%), Positives = 49/77 (64%), Gaps = 0/77 (0%)
Query 33 QPDKKALLNRLSRIGGQVNGVAQMVENDRYCVDILTQISAIRSALDSVSTQLLNHHVQGC 92
Q + L+NRLSRI G + GV MV+ +R C ++L Q++A+R ALD V+ +L+ H+ C
Sbjct 83 QESLQKLVNRLSRIEGHIRGVKTMVQENRPCPEVLIQVAAVRGALDRVARLILDDHMNEC 142
Query 93 VRRAVVEDGGEEVIGEL 109
+ RA E E+ + EL
Sbjct 143 ITRAAAEGNIEQELAEL 159
>Q5SHL1 Copper-sensing transcriptional repressor CsoR [Thermus
thermophilus (strain ATCC 27634 / DSM 579 / HB8)]
Length=94
Score = 51.2 bits (121), Expect = 2e-13
Identities = 28/89 (31%), Positives = 48/89 (54%), Gaps = 1/89 (1%)
Query 27 SQKHVIQPDKKALLNRLSRIGGQVNGVAQMVENDR-YCVDILTQISAIRSALDSVSTQLL 85
S H+ ++ RL G + G+ +M+E+++ YCVD+L Q+ A+ ALD V +L
Sbjct 4 SHLHLDPKVREEARRRLLSAKGHLEGILRMLEDEKVYCVDVLKQLKAVEGALDRVGEMVL 63
Query 86 NHHVQGCVRRAVVEDGGEEVIGELLMLIK 114
H++ V A EE++ EL+ +K
Sbjct 64 RAHLKDHVATAHERGDVEEIVEELMEALK 92
>Q06VT2 NcrB [Leptospirillum ferriphilum]
Length=89
Score = 47.4 bits (111), Expect = 6e-12
Identities = 22/74 (30%), Positives = 39/74 (53%), Gaps = 3/74 (4%)
Query 30 HVIQPDKKALLNRLSRIGGQVNGVAQMVENDRYCVDILTQISAIRSALDSVSTQLLNHHV 89
H PD ++ RL R G + QM+E+++ C+DI Q+ A+ A+ + L++ H+
Sbjct 4 HASHPD---IIKRLKRAAGHLKSTIQMLEDEKACLDIAQQLHAVEKAITNAKRTLIHDHL 60
Query 90 QGCVRRAVVEDGGE 103
C+ A+ D E
Sbjct 61 DHCLEDALHADHTE 74
>Q1KLR1 NcrB [Serratia marcescens]
Length=89
Score = 47.0 bits (110), Expect = 8e-12
Identities = 25/87 (29%), Positives = 42/87 (48%), Gaps = 5/87 (6%)
Query 30 HVIQPDKKALLNRLSRIGGQVNGVAQMVENDRYCVDILTQISAIRSALDSVSTQLLNHHV 89
H PD ++ RL R G + QM+E++R C+DI Q+ A+ A+ + L+ H+
Sbjct 4 HASHPD---IIKRLKRAAGHLKSTIQMLEDERACLDIAQQLHAVEKAITNAKRTLIYDHL 60
Query 90 QGCVRRAVVED--GGEEVIGELLMLIK 114
C+ + D G E + E + K
Sbjct 61 DHCLEDVLHADHAGTETTLSEFKEITK 87
>Q6RUG2 NirB [Klebsiella oxytoca]
Length=89
Score = 47.0 bits (110), Expect = 8e-12
Identities = 21/71 (30%), Positives = 38/71 (54%), Gaps = 3/71 (4%)
Query 30 HVIQPDKKALLNRLSRIGGQVNGVAQMVENDRYCVDILTQISAIRSALDSVSTQLLNHHV 89
H PD ++ RL R G + QM+E+++ C+DI Q+ A+ A+ + L++ H+
Sbjct 4 HASHPD---IIKRLKRAAGHLKSTIQMLEDEKACLDIAQQLHAVEKAITNAKRTLIHDHL 60
Query 90 QGCVRRAVVED 100
C+ A+ D
Sbjct 61 DHCLEDALHAD 71
>C1JGW2 Metal-sensitive transcriptional regulator [Oenococcus
oeni]
Length=78
Score = 45.8 bits (107), Expect = 2e-11
Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 0/59 (0%)
Query 42 RLSRIGGQVNGVAQMVENDRYCVDILTQISAIRSALDSVSTQLLNHHVQGCVRRAVVED 100
+L R GQ++GV +M++ +R C D+L Q+SA++S++D ++ ++ CV D
Sbjct 12 QLKRSVGQLDGVLRMMDENRPCEDVLVQLSAVKSSIDKAMKLVIARNINNCVDAMTTAD 70
>A0A0H3NLH8 Transcriptional repressor FrmR [Salmonella typhimurium
(strain SL1344)]
Length=91
Score = 44.7 bits (104), Expect = 7e-11
Identities = 20/56 (36%), Positives = 37/56 (66%), Gaps = 0/56 (0%)
Query 35 DKKALLNRLSRIGGQVNGVAQMVENDRYCVDILTQISAIRSALDSVSTQLLNHHVQ 90
DKK +L R+ RI GQV + + +E+ C+ IL QI+A+R A + + ++++ H++
Sbjct 7 DKKRILTRVRRIRGQVEALERALESGEPCLAILQQIAAVRGASNGLMSEMVEIHLK 62
Lambda K H a alpha
0.322 0.137 0.393 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 146856
Database: e5f524e5244dd57ce8207a08b6c2cd4a.TrEMBL.fasta
Posted date: May 10, 2024 12:07 PM
Number of letters in database: 2,308
Number of sequences in database: 20
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
