BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 6e130026c264f425930e6d74f8a0f590.SwissProt.fasta
19 sequences; 3,302 total letters
Query= ACIAD2430
Length=129
Score E
Sequences producing significant alignments: (Bits) Value
Q6F9R0 Small ribosomal subunit protein bS6 [Acinetobacter baylyi ... 255 4e-93
B0V7G7 Small ribosomal subunit protein bS6 [Acinetobacter baumann... 244 5e-89
A3M6Q4 Small ribosomal subunit protein bS6 [Acinetobacter baumann... 244 5e-89
B0VM10 Small ribosomal subunit protein bS6 [Acinetobacter baumann... 244 5e-89
B7IBC1 Small ribosomal subunit protein bS6 [Acinetobacter baumann... 244 5e-89
B7H0K0 Small ribosomal subunit protein bS6 [Acinetobacter baumann... 244 5e-89
A5WFY9 Small ribosomal subunit protein bS6 [Psychrobacter sp. (st... 192 2e-68
Q1QBZ0 Small ribosomal subunit protein bS6 [Psychrobacter cryohal... 184 5e-65
Q4FS21 Small ribosomal subunit protein bS6 [Psychrobacter arcticu... 184 7e-65
A7MSX8 Small ribosomal subunit protein bS6 [Vibrio campbellii (st... 176 7e-62
A6VMD6 Small ribosomal subunit protein bS6 [Actinobacillus succin... 175 1e-61
Q65VD4 Small ribosomal subunit protein bS6 [Mannheimia succinicip... 174 4e-61
Q0I4E5 Small ribosomal subunit protein bS6 [Histophilus somni (st... 174 4e-61
Q87L72 Small ribosomal subunit protein bS6 [Vibrio parahaemolytic... 173 1e-60
P02358 Small ribosomal subunit protein bS6 [Escherichia coli (str... 167 3e-58
Q948R9 Protein REGULATOR OF FATTY ACID COMPOSITION 3, chloroplast... 89.7 4e-26
P78316 Nucleolar protein 14 [Homo sapiens] 33.1 9e-06
>Q6F9R0 Small ribosomal subunit protein bS6 [Acinetobacter baylyi
(strain ATCC 33305 / BD413 / ADP1)]
Length=128
Score = 255 bits (651), Expect = 4e-93
Identities = 128/128 (100%), Positives = 128/128 (100%), Gaps = 0/128 (0%)
Query 1 MRHYEIVLLVHPDQSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHYI 60
MRHYEIVLLVHPDQSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHYI
Sbjct 1 MRHYEIVLLVHPDQSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHYI 60
Query 61 LMNVECGQTTLDELEELFRYNDAIIRNIIIRREHAITEESLLAKSAEEKRARKAQREEAQ 120
LMNVECGQTTLDELEELFRYNDAIIRNIIIRREHAITEESLLAKSAEEKRARKAQREEAQ
Sbjct 61 LMNVECGQTTLDELEELFRYNDAIIRNIIIRREHAITEESLLAKSAEEKRARKAQREEAQ 120
Query 121 QIQDSAEA 128
QIQDSAEA
Sbjct 121 QIQDSAEA 128
>B0V7G7 Small ribosomal subunit protein bS6 [Acinetobacter baumannii
(strain AYE)]
Length=127
Score = 244 bits (624), Expect = 5e-89
Identities = 121/127 (95%), Positives = 124/127 (98%), Gaps = 0/127 (0%)
Query 1 MRHYEIVLLVHPDQSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHYI 60
MRHYEIVLLVHPDQSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHYI
Sbjct 1 MRHYEIVLLVHPDQSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHYI 60
Query 61 LMNVECGQTTLDELEELFRYNDAIIRNIIIRREHAITEESLLAKSAEEKRARKAQREEAQ 120
LMNVECGQ+TLDELEELFRYNDAIIRN+IIRREHAITEESLLAKSAEEKRARKAQREEAQ
Sbjct 61 LMNVECGQSTLDELEELFRYNDAIIRNLIIRREHAITEESLLAKSAEEKRARKAQREEAQ 120
Query 121 QIQDSAE 127
Q+ AE
Sbjct 121 QVAQEAE 127
>A3M6Q4 Small ribosomal subunit protein bS6 [Acinetobacter baumannii
(strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755
/ 5377)]
Length=127
Score = 244 bits (624), Expect = 5e-89
Identities = 121/127 (95%), Positives = 124/127 (98%), Gaps = 0/127 (0%)
Query 1 MRHYEIVLLVHPDQSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHYI 60
MRHYEIVLLVHPDQSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHYI
Sbjct 1 MRHYEIVLLVHPDQSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHYI 60
Query 61 LMNVECGQTTLDELEELFRYNDAIIRNIIIRREHAITEESLLAKSAEEKRARKAQREEAQ 120
LMNVECGQ+TLDELEELFRYNDAIIRN+IIRREHAITEESLLAKSAEEKRARKAQREEAQ
Sbjct 61 LMNVECGQSTLDELEELFRYNDAIIRNLIIRREHAITEESLLAKSAEEKRARKAQREEAQ 120
Query 121 QIQDSAE 127
Q+ AE
Sbjct 121 QVAQEAE 127
>B0VM10 Small ribosomal subunit protein bS6 [Acinetobacter baumannii
(strain SDF)]
Length=127
Score = 244 bits (624), Expect = 5e-89
Identities = 121/127 (95%), Positives = 124/127 (98%), Gaps = 0/127 (0%)
Query 1 MRHYEIVLLVHPDQSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHYI 60
MRHYEIVLLVHPDQSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHYI
Sbjct 1 MRHYEIVLLVHPDQSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHYI 60
Query 61 LMNVECGQTTLDELEELFRYNDAIIRNIIIRREHAITEESLLAKSAEEKRARKAQREEAQ 120
LMNVECGQ+TLDELEELFRYNDAIIRN+IIRREHAITEESLLAKSAEEKRARKAQREEAQ
Sbjct 61 LMNVECGQSTLDELEELFRYNDAIIRNLIIRREHAITEESLLAKSAEEKRARKAQREEAQ 120
Query 121 QIQDSAE 127
Q+ AE
Sbjct 121 QVAQEAE 127
>B7IBC1 Small ribosomal subunit protein bS6 [Acinetobacter baumannii
(strain AB0057)]
Length=127
Score = 244 bits (624), Expect = 5e-89
Identities = 121/127 (95%), Positives = 124/127 (98%), Gaps = 0/127 (0%)
Query 1 MRHYEIVLLVHPDQSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHYI 60
MRHYEIVLLVHPDQSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHYI
Sbjct 1 MRHYEIVLLVHPDQSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHYI 60
Query 61 LMNVECGQTTLDELEELFRYNDAIIRNIIIRREHAITEESLLAKSAEEKRARKAQREEAQ 120
LMNVECGQ+TLDELEELFRYNDAIIRN+IIRREHAITEESLLAKSAEEKRARKAQREEAQ
Sbjct 61 LMNVECGQSTLDELEELFRYNDAIIRNLIIRREHAITEESLLAKSAEEKRARKAQREEAQ 120
Query 121 QIQDSAE 127
Q+ AE
Sbjct 121 QVAQEAE 127
>B7H0K0 Small ribosomal subunit protein bS6 [Acinetobacter baumannii
(strain AB307-0294)]
Length=127
Score = 244 bits (624), Expect = 5e-89
Identities = 121/127 (95%), Positives = 124/127 (98%), Gaps = 0/127 (0%)
Query 1 MRHYEIVLLVHPDQSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHYI 60
MRHYEIVLLVHPDQSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHYI
Sbjct 1 MRHYEIVLLVHPDQSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHYI 60
Query 61 LMNVECGQTTLDELEELFRYNDAIIRNIIIRREHAITEESLLAKSAEEKRARKAQREEAQ 120
LMNVECGQ+TLDELEELFRYNDAIIRN+IIRREHAITEESLLAKSAEEKRARKAQREEAQ
Sbjct 61 LMNVECGQSTLDELEELFRYNDAIIRNLIIRREHAITEESLLAKSAEEKRARKAQREEAQ 120
Query 121 QIQDSAE 127
Q+ AE
Sbjct 121 QVAQEAE 127
>A5WFY9 Small ribosomal subunit protein bS6 [Psychrobacter sp.
(strain PRwf-1)]
Length=134
Score = 192 bits (489), Expect = 2e-68
Identities = 89/118 (75%), Positives = 105/118 (89%), Gaps = 0/118 (0%)
Query 1 MRHYEIVLLVHPDQSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHYI 60
MRHYE+VL+VHPDQSDQVVGMVERYI +++ +G +HRLEDWGRRQLAYPINKIHKAHY+
Sbjct 1 MRHYEVVLIVHPDQSDQVVGMVERYIKLVQDNNGMVHRLEDWGRRQLAYPINKIHKAHYV 60
Query 61 LMNVECGQTTLDELEELFRYNDAIIRNIIIRREHAITEESLLAKSAEEKRARKAQREE 118
L N+EC TL+ELEELFRYNDAIIR++++RR+ AITE S LAKSA+EKRARKA R E
Sbjct 61 LFNIECDGATLEELEELFRYNDAIIRSLVVRRDDAITEPSQLAKSADEKRARKAPRSE 118
>Q1QBZ0 Small ribosomal subunit protein bS6 [Psychrobacter cryohalolentis
(strain ATCC BAA-1226 / DSM 17306 / VKM B-2378 /
K5)]
Length=131
Score = 184 bits (467), Expect = 5e-65
Identities = 88/125 (70%), Positives = 104/125 (83%), Gaps = 0/125 (0%)
Query 1 MRHYEIVLLVHPDQSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHYI 60
MRHYE+VLLVHPDQSDQVVGMVERYI +++ +G IHRLEDWGRRQLAYPINKIHKAHY+
Sbjct 1 MRHYELVLLVHPDQSDQVVGMVERYIKLVQDNNGTIHRLEDWGRRQLAYPINKIHKAHYV 60
Query 61 LMNVECGQTTLDELEELFRYNDAIIRNIIIRREHAITEESLLAKSAEEKRARKAQREEAQ 120
L N+E TL ELEELFRYNDAIIR++++RR+ A+TEES LAK+A+EKRARKA
Sbjct 61 LFNIETDGETLAELEELFRYNDAIIRSLVMRRDDAVTEESQLAKNADEKRARKATTRRPD 120
Query 121 QIQDS 125
D+
Sbjct 121 SNDDN 125
>Q4FS21 Small ribosomal subunit protein bS6 [Psychrobacter arcticus
(strain DSM 17307 / VKM B-2377 / 273-4)]
Length=132
Score = 184 bits (466), Expect = 7e-65
Identities = 87/114 (76%), Positives = 102/114 (89%), Gaps = 0/114 (0%)
Query 1 MRHYEIVLLVHPDQSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHYI 60
MRHYE+VLLVHPDQSDQVVGMVERYI +++ +G IHRLEDWGRRQLAYPINKIHKAHY+
Sbjct 1 MRHYELVLLVHPDQSDQVVGMVERYIKLVQDNNGTIHRLEDWGRRQLAYPINKIHKAHYV 60
Query 61 LMNVECGQTTLDELEELFRYNDAIIRNIIIRREHAITEESLLAKSAEEKRARKA 114
L N+E TL ELEELFRYNDAIIR++++RR+ A+TEES LAK+A+EKRARKA
Sbjct 61 LFNIETDGETLAELEELFRYNDAIIRSLVMRRDDAVTEESQLAKNADEKRARKA 114
>A7MSX8 Small ribosomal subunit protein bS6 [Vibrio campbellii
(strain ATCC BAA-1116)]
Length=129
Score = 176 bits (446), Expect = 7e-62
Identities = 81/128 (63%), Positives = 101/128 (79%), Gaps = 0/128 (0%)
Query 1 MRHYEIVLLVHPDQSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHYI 60
MRHYEIV +VHPDQS+QV GM+ERY I EA G+IHRLEDWGRRQLAYPINK+HKAHY+
Sbjct 1 MRHYEIVFMVHPDQSEQVAGMIERYTGSITEAGGKIHRLEDWGRRQLAYPINKLHKAHYV 60
Query 61 LMNVECGQTTLDELEELFRYNDAIIRNIIIRREHAITEESLLAKSAEEKRARKAQREEAQ 120
LMNVE GQ +DELE FR+NDA++RN+I+R + AITE+S++ K EE+ R +REE
Sbjct 61 LMNVEAGQEVIDELETAFRFNDAVLRNMIMRTKAAITEQSIMLKQKEERAERAPRREERA 120
Query 121 QIQDSAEA 128
+ + A A
Sbjct 121 EAKPEAAA 128
>A6VMD6 Small ribosomal subunit protein bS6 [Actinobacillus succinogenes
(strain ATCC 55618 / DSM 22257 / CCUG 43843 / 130Z)]
Length=126
Score = 175 bits (444), Expect = 1e-61
Identities = 81/127 (64%), Positives = 101/127 (80%), Gaps = 1/127 (1%)
Query 1 MRHYEIVLLVHPDQSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHYI 60
MRHYEIV +VHPDQS+QV GM+ERY +KEA GQIHRLEDWGRRQLAYPINK+HKAHY+
Sbjct 1 MRHYEIVFMVHPDQSEQVPGMIERYTGSVKEAGGQIHRLEDWGRRQLAYPINKLHKAHYV 60
Query 61 LMNVECGQTTLDELEELFRYNDAIIRNIIIRREHAITEESLLAKSAEEKRARKAQREEAQ 120
LMNVE Q +DELE FRYNDA++RN+IIR +HA+TE S +AK+ +E++ A+ E
Sbjct 61 LMNVEAPQEVIDELETTFRYNDAVLRNVIIRTKHAVTEASPMAKAKDERKVAVAE-VETN 119
Query 121 QIQDSAE 127
+D+ E
Sbjct 120 NFEDAEE 126
>Q65VD4 Small ribosomal subunit protein bS6 [Mannheimia succiniciproducens
(strain MBEL55E)]
Length=125
Score = 174 bits (441), Expect = 4e-61
Identities = 81/127 (64%), Positives = 100/127 (79%), Gaps = 2/127 (2%)
Query 1 MRHYEIVLLVHPDQSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHYI 60
MRHYEIV +VHPDQS+QV GM+ERY +KEA GQIHRLEDWGRRQLAYPINK+HKAHY+
Sbjct 1 MRHYEIVFMVHPDQSEQVPGMIERYTGSVKEAGGQIHRLEDWGRRQLAYPINKLHKAHYV 60
Query 61 LMNVECGQTTLDELEELFRYNDAIIRNIIIRREHAITEESLLAKSAEEKRARKAQREEAQ 120
LMNVE Q +DELE FRYNDA++RN+IIR +HA+TE S + K+ +E+RA + E
Sbjct 61 LMNVEAPQEVIDELETTFRYNDAVLRNVIIRTKHAVTEASPMVKAKDERRA--SAEVENN 118
Query 121 QIQDSAE 127
+D+ E
Sbjct 119 DFEDAEE 125
>Q0I4E5 Small ribosomal subunit protein bS6 [Histophilus somni
(strain 129Pt)]
Length=125
Score = 174 bits (441), Expect = 4e-61
Identities = 79/110 (72%), Positives = 94/110 (85%), Gaps = 0/110 (0%)
Query 1 MRHYEIVLLVHPDQSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHYI 60
MRHYEIV +VHPDQS+QV GM+ERY S IKEA GQIHRLEDWGRRQLAYPINK+HKAHY+
Sbjct 1 MRHYEIVFMVHPDQSEQVPGMIERYTSSIKEAGGQIHRLEDWGRRQLAYPINKLHKAHYV 60
Query 61 LMNVECGQTTLDELEELFRYNDAIIRNIIIRREHAITEESLLAKSAEEKR 110
LMNVE Q +DELE FRYNDA++RN+IIR +HA+TE S + K+ EE++
Sbjct 61 LMNVEAPQEVIDELETTFRYNDAVLRNVIIRTKHAVTEASPMVKAREERK 110
>Q87L72 Small ribosomal subunit protein bS6 [Vibrio parahaemolyticus
serotype O3:K6 (strain RIMD 2210633)]
Length=129
Score = 173 bits (438), Expect = 1e-60
Identities = 78/120 (65%), Positives = 98/120 (82%), Gaps = 0/120 (0%)
Query 1 MRHYEIVLLVHPDQSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHYI 60
MRHYEIV +VHPDQS+QV GM+ERY I EA G+IHRLEDWGRRQLAYPINK+HKAHY+
Sbjct 1 MRHYEIVFMVHPDQSEQVAGMIERYTGSITEAGGKIHRLEDWGRRQLAYPINKLHKAHYV 60
Query 61 LMNVECGQTTLDELEELFRYNDAIIRNIIIRREHAITEESLLAKSAEEKRARKAQREEAQ 120
LMNVE Q +DELE FR+NDA++RN+I+R + AITE+S++ K EE+ R+ +R EA+
Sbjct 61 LMNVEADQAVIDELETAFRFNDAVLRNMIMRTKAAITEQSIMLKQKEERAPRREERSEAK 120
>P02358 Small ribosomal subunit protein bS6 [Escherichia coli
(strain K12)]
Length=135
Score = 167 bits (423), Expect = 3e-58
Identities = 78/128 (61%), Positives = 102/128 (80%), Gaps = 2/128 (2%)
Query 1 MRHYEIVLLVHPDQSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHYI 60
MRHYEIV +VHPDQS+QV GM+ERY + I A+G+IHRLEDWGRRQLAYPINK+HKAHY+
Sbjct 1 MRHYEIVFMVHPDQSEQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHYV 60
Query 61 LMNVECGQTTLDELEELFRYNDAIIRNIIIRREHAITEESLLAKSAEEKRARKAQREEAQ 120
LMNVE Q +DELE FR+NDA+IR++++R +HA+TE S + K+ +E+R R+ + A
Sbjct 61 LMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASPMVKAKDERRERR--DDFAN 118
Query 121 QIQDSAEA 128
+ D AEA
Sbjct 119 ETADDAEA 126
>Q948R9 Protein REGULATOR OF FATTY ACID COMPOSITION 3, chloroplastic
[Arabidopsis thaliana]
Length=314
Score = 89.7 bits (221), Expect = 4e-26
Identities = 46/132 (35%), Positives = 74/132 (56%), Gaps = 5/132 (4%)
Query 1 MRHYEIVLLVHPDQSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHYI 60
MRHYE+V L+H +++V + ++ +KE G++ R DWG R+LAY I K AHYI
Sbjct 120 MRHYEVVYLIHEKHAEEVESINQKVQDYLKEKKGKVWRFSDWGMRRLAYKIQKAENAHYI 179
Query 61 LMNVECGQTTLDELEELFRYNDAIIRNIIIRREHAITEESLLAKSAEEKRARKA-----Q 115
LMN E L+E + L ++ +IR+++++R+ AITE+ RA +
Sbjct 180 LMNFEIEAKYLNEFKGLLDSDERVIRHLVMKRDEAITEDCPPPPEFHSVRAGDEYYDDDE 239
Query 116 REEAQQIQDSAE 127
EE ++ +D E
Sbjct 240 EEEIEEDEDEGE 251
>P78316 Nucleolar protein 14 [Homo sapiens]
Length=857
Score = 33.1 bits (74), Expect = 9e-06
Identities = 14/29 (48%), Positives = 22/29 (76%), Gaps = 0/29 (0%)
Query 99 ESLLAKSAEEKRARKAQREEAQQIQDSAE 127
E L+AKS +EKR R+AQRE+A ++ + +
Sbjct 194 EELIAKSKQEKRERQAQREDALELTEKLD 222
Lambda K H a alpha
0.323 0.136 0.386 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 247878
Database: 6e130026c264f425930e6d74f8a0f590.SwissProt.fasta
Posted date: Jun 1, 2024 11:14 PM
Number of letters in database: 3,302
Number of sequences in database: 19
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
