Comparative Genomics

ACIAD2431 / SwissProt Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 6e8aff8f81b6e84b5f1de620d054275a.SwissProt.fasta
           32 sequences; 2,523 total letters



Query= ACIAD2431

Length=76
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q6F9Q9 Small ribosomal subunit protein bS18 [Acinetobacter baylyi...  154     6e-55
A3M6Q5 Small ribosomal subunit protein bS18 [Acinetobacter bauman...  153     2e-54
B0VM09 Small ribosomal subunit protein bS18 [Acinetobacter bauman...  153     2e-54
B2HUA3 Small ribosomal subunit protein bS18 [Acinetobacter bauman...  153     2e-54
B7IBC2 Small ribosomal subunit protein bS18 [Acinetobacter bauman...  153     2e-54
B7H0J9 Small ribosomal subunit protein bS18 [Acinetobacter bauman...  153     2e-54
Q1QZ62 Small ribosomal subunit protein bS18 [Chromohalobacter sal...  135     2e-47
Q0VMG1 Small ribosomal subunit protein bS18 [Alcanivorax borkumen...  134     4e-47
A5WFZ0 Small ribosomal subunit protein bS18 [Psychrobacter sp. (s...  131     6e-46
B0US45 Small ribosomal subunit protein bS18 [Histophilus somni (s...  131     8e-46
Q0I4E7 Small ribosomal subunit protein bS18 [Histophilus somni (s...  131     8e-46
Q65VD2 Small ribosomal subunit protein bS18 [Mannheimia succinici...  131     8e-46
A6VMD4 Small ribosomal subunit protein bS18 [Actinobacillus succi...  131     8e-46
Q1QBZ1 Small ribosomal subunit protein bS18 [Psychrobacter cryoha...  131     9e-46
Q4FS20 Small ribosomal subunit protein bS18 [Psychrobacter arctic...  131     9e-46
P57916 Small ribosomal subunit protein bS18 [Pasteurella multocid...  130     1e-45
A1U392 Small ribosomal subunit protein bS18 [Marinobacter nauticu...  130     1e-45
Q4QN03 Small ribosomal subunit protein bS18 [Haemophilus influenz...  129     3e-45
P66458 Small ribosomal subunit protein bS18 [Haemophilus ducreyi ...  129     3e-45
B0BQB1 Small ribosomal subunit protein bS18 [Actinobacillus pleur...  129     3e-45
B3GY57 Small ribosomal subunit protein bS18 [Actinobacillus pleur...  129     3e-45
B8F5T5 Small ribosomal subunit protein bS18 [Glaesserella parasui...  129     3e-45
P0A7T7 Small ribosomal subunit protein bS18 [Escherichia coli (st...  125     2e-43
P10806 Small ribosomal subunit protein bS18 [Geobacillus stearoth...  93.6    8e-31
P21475 Small ribosomal subunit protein bS18 [Bacillus subtilis (s...  89.0    6e-29
O69301 Small ribosomal subunit protein bS18 [Campylobacter jejuni...  73.6    8e-23
P24286 Small ribosomal subunit protein bS18 [Chlamydia muridarum ...  72.0    3e-22
P15760 Small ribosomal subunit protein bS18c [Cyanophora paradoxa]    62.4    1e-18
Q5SLQ0 Small ribosomal subunit protein bS18 [Thermus thermophilus...  57.8    1e-16
P30390 Small ribosomal subunit protein bS18c [Euglena gracilis]       51.2    3e-14
O20032 Small ribosomal subunit protein bS18c [Chlamydomonas reinh...  49.3    8e-13
P49169 Small ribosomal subunit protein bS18c [Pisum sativum]          48.1    1e-12


>Q6F9Q9 Small ribosomal subunit protein bS18 [Acinetobacter baylyi 
(strain ATCC 33305 / BD413 / ADP1)]
Length=75

 Score = 154 bits (389),  Expect = 6e-55
 Identities = 75/75 (100%), Positives = 75/75 (100%), Gaps = 0/75 (0%)

Query  1   MARFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIK  60
           MARFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIK
Sbjct  1   MARFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIK  60

Query  61  QARYLALIPYTDNHK  75
           QARYLALIPYTDNHK
Sbjct  61  QARYLALIPYTDNHK  75


>A3M6Q5 Small ribosomal subunit protein bS18 [Acinetobacter baumannii 
(strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 
/ 5377)]
Length=75

 Score = 153 bits (386),  Expect = 2e-54
 Identities = 74/75 (99%), Positives = 75/75 (100%), Gaps = 0/75 (0%)

Query  1   MARFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIK  60
           MARFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIK
Sbjct  1   MARFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIK  60

Query  61  QARYLALIPYTDNHK  75
           QARYL+LIPYTDNHK
Sbjct  61  QARYLSLIPYTDNHK  75


>B0VM09 Small ribosomal subunit protein bS18 [Acinetobacter baumannii 
(strain SDF)]
Length=75

 Score = 153 bits (386),  Expect = 2e-54
 Identities = 74/75 (99%), Positives = 75/75 (100%), Gaps = 0/75 (0%)

Query  1   MARFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIK  60
           MARFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIK
Sbjct  1   MARFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIK  60

Query  61  QARYLALIPYTDNHK  75
           QARYL+LIPYTDNHK
Sbjct  61  QARYLSLIPYTDNHK  75


>B2HUA3 Small ribosomal subunit protein bS18 [Acinetobacter baumannii 
(strain ACICU)]
Length=75

 Score = 153 bits (386),  Expect = 2e-54
 Identities = 74/75 (99%), Positives = 75/75 (100%), Gaps = 0/75 (0%)

Query  1   MARFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIK  60
           MARFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIK
Sbjct  1   MARFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIK  60

Query  61  QARYLALIPYTDNHK  75
           QARYL+LIPYTDNHK
Sbjct  61  QARYLSLIPYTDNHK  75


>B7IBC2 Small ribosomal subunit protein bS18 [Acinetobacter baumannii 
(strain AB0057)]
Length=75

 Score = 153 bits (386),  Expect = 2e-54
 Identities = 74/75 (99%), Positives = 75/75 (100%), Gaps = 0/75 (0%)

Query  1   MARFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIK  60
           MARFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIK
Sbjct  1   MARFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIK  60

Query  61  QARYLALIPYTDNHK  75
           QARYL+LIPYTDNHK
Sbjct  61  QARYLSLIPYTDNHK  75


>B7H0J9 Small ribosomal subunit protein bS18 [Acinetobacter baumannii 
(strain AB307-0294)]
Length=75

 Score = 153 bits (386),  Expect = 2e-54
 Identities = 74/75 (99%), Positives = 75/75 (100%), Gaps = 0/75 (0%)

Query  1   MARFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIK  60
           MARFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIK
Sbjct  1   MARFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIK  60

Query  61  QARYLALIPYTDNHK  75
           QARYL+LIPYTDNHK
Sbjct  61  QARYLSLIPYTDNHK  75


>Q1QZ62 Small ribosomal subunit protein bS18 [Chromohalobacter 
salexigens (strain ATCC BAA-138 / DSM 3043 / CIP 106854 / NCIMB 
13768 / 1H11)]
Length=75

 Score = 135 bits (340),  Expect = 2e-47
 Identities = 64/75 (85%), Positives = 70/75 (93%), Gaps = 0/75 (0%)

Query  1   MARFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIK  60
           MARF+RRRKFCRFTAE V YIDYKDIDTLK YITE GKIVPSRITGTKARYQRQL+ AIK
Sbjct  1   MARFFRRRKFCRFTAEGVKYIDYKDIDTLKSYITETGKIVPSRITGTKARYQRQLSTAIK  60

Query  61  QARYLALIPYTDNHK  75
           +ARYLAL+PYTD+H+
Sbjct  61  RARYLALLPYTDSHQ  75


>Q0VMG1 Small ribosomal subunit protein bS18 [Alcanivorax borkumensis 
(strain ATCC 700651 / DSM 11573 / NCIMB 13689 / SK2)]
Length=76

 Score = 134 bits (338),  Expect = 4e-47
 Identities = 64/74 (86%), Positives = 69/74 (93%), Gaps = 0/74 (0%)

Query  1   MARFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIK  60
           MARFYRRRKFCRFTAE V YIDYKD+DTLK YITE GKIVPSRITGTKARYQRQLA AIK
Sbjct  1   MARFYRRRKFCRFTAEGVEYIDYKDLDTLKAYITETGKIVPSRITGTKARYQRQLASAIK  60

Query  61  QARYLALIPYTDNH  74
           QAR+LAL+PY+D+H
Sbjct  61  QARFLALLPYSDSH  74


>A5WFZ0 Small ribosomal subunit protein bS18 [Psychrobacter sp. 
(strain PRwf-1)]
Length=75

 Score = 131 bits (330),  Expect = 6e-46
 Identities = 60/75 (80%), Positives = 69/75 (92%), Gaps = 0/75 (0%)

Query  1   MARFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIK  60
           MARFYRRRKFCRFTAE + +IDYKD++ LKQYI++NGKIVPSRITGT  +YQRQLA AIK
Sbjct  1   MARFYRRRKFCRFTAEGITHIDYKDVELLKQYISDNGKIVPSRITGTSNKYQRQLATAIK  60

Query  61  QARYLALIPYTDNHK  75
           QARYLAL+PYTDNH+
Sbjct  61  QARYLALLPYTDNHQ  75


>B0US45 Small ribosomal subunit protein bS18 [Histophilus somni 
(strain 2336)]
Length=75

 Score = 131 bits (329),  Expect = 8e-46
 Identities = 62/75 (83%), Positives = 70/75 (93%), Gaps = 0/75 (0%)

Query  1   MARFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIK  60
           MAR++RRRKFCRFTAENV  IDYKDI TLK YITE+GKIVPSRITGT+A+YQRQLA AIK
Sbjct  1   MARYFRRRKFCRFTAENVVEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIK  60

Query  61  QARYLALIPYTDNHK  75
           +ARYLAL+PYTDNH+
Sbjct  61  RARYLALLPYTDNHQ  75


>Q0I4E7 Small ribosomal subunit protein bS18 [Histophilus somni 
(strain 129Pt)]
Length=75

 Score = 131 bits (329),  Expect = 8e-46
 Identities = 62/75 (83%), Positives = 70/75 (93%), Gaps = 0/75 (0%)

Query  1   MARFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIK  60
           MAR++RRRKFCRFTAENV  IDYKDI TLK YITE+GKIVPSRITGT+A+YQRQLA AIK
Sbjct  1   MARYFRRRKFCRFTAENVVEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIK  60

Query  61  QARYLALIPYTDNHK  75
           +ARYLAL+PYTDNH+
Sbjct  61  RARYLALLPYTDNHQ  75


>Q65VD2 Small ribosomal subunit protein bS18 [Mannheimia succiniciproducens 
(strain MBEL55E)]
Length=75

 Score = 131 bits (329),  Expect = 8e-46
 Identities = 62/75 (83%), Positives = 70/75 (93%), Gaps = 0/75 (0%)

Query  1   MARFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIK  60
           MAR++RRRKFCRFTAENV  IDYKDI TLK YITE+GKIVPSRITGT+A+YQRQLA AIK
Sbjct  1   MARYFRRRKFCRFTAENVVEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIK  60

Query  61  QARYLALIPYTDNHK  75
           +ARYLAL+PYTDNH+
Sbjct  61  RARYLALLPYTDNHQ  75


>A6VMD4 Small ribosomal subunit protein bS18 [Actinobacillus succinogenes 
(strain ATCC 55618 / DSM 22257 / CCUG 43843 / 130Z)]
Length=75

 Score = 131 bits (329),  Expect = 8e-46
 Identities = 62/75 (83%), Positives = 70/75 (93%), Gaps = 0/75 (0%)

Query  1   MARFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIK  60
           MAR++RRRKFCRFTAENV  IDYKDI TLK YITE+GKIVPSRITGT+A+YQRQLA AIK
Sbjct  1   MARYFRRRKFCRFTAENVVEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIK  60

Query  61  QARYLALIPYTDNHK  75
           +ARYLAL+PYTDNH+
Sbjct  61  RARYLALLPYTDNHQ  75


>Q1QBZ1 Small ribosomal subunit protein bS18 [Psychrobacter cryohalolentis 
(strain ATCC BAA-1226 / DSM 17306 / VKM B-2378 
/ K5)]
Length=76

 Score = 131 bits (329),  Expect = 9e-46
 Identities = 59/75 (79%), Positives = 69/75 (92%), Gaps = 0/75 (0%)

Query  1   MARFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIK  60
           MARFYRRRKFCRFTAE + +IDYKD++ LKQYI++NGKIVPSRITGT  +YQRQLA AIK
Sbjct  1   MARFYRRRKFCRFTAEGITHIDYKDVELLKQYISDNGKIVPSRITGTSTKYQRQLATAIK  60

Query  61  QARYLALIPYTDNHK  75
           QARYL+L+PYTDNH+
Sbjct  61  QARYLSLLPYTDNHQ  75


>Q4FS20 Small ribosomal subunit protein bS18 [Psychrobacter arcticus 
(strain DSM 17307 / VKM B-2377 / 273-4)]
Length=76

 Score = 131 bits (329),  Expect = 9e-46
 Identities = 59/75 (79%), Positives = 69/75 (92%), Gaps = 0/75 (0%)

Query  1   MARFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIK  60
           MARFYRRRKFCRFTAE + +IDYKD++ LKQYI++NGKIVPSRITGT  +YQRQLA AIK
Sbjct  1   MARFYRRRKFCRFTAEGITHIDYKDVELLKQYISDNGKIVPSRITGTSTKYQRQLATAIK  60

Query  61  QARYLALIPYTDNHK  75
           QARYL+L+PYTDNH+
Sbjct  61  QARYLSLLPYTDNHQ  75


>P57916 Small ribosomal subunit protein bS18 [Pasteurella multocida 
(strain Pm70)]
Length=75

 Score = 130 bits (328),  Expect = 1e-45
 Identities = 61/75 (81%), Positives = 70/75 (93%), Gaps = 0/75 (0%)

Query  1   MARFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIK  60
           MAR++RRRKFCRFTAENV  IDYKD+ TLK YITE+GKIVPSRITGT+A+YQRQLA AIK
Sbjct  1   MARYFRRRKFCRFTAENVVEIDYKDVATLKNYITESGKIVPSRITGTRAKYQRQLARAIK  60

Query  61  QARYLALIPYTDNHK  75
           +ARYLAL+PYTDNH+
Sbjct  61  RARYLALLPYTDNHQ  75


>A1U392 Small ribosomal subunit protein bS18 [Marinobacter nauticus 
(strain ATCC 700491 / DSM 11845 / VT8)]
Length=76

 Score = 130 bits (328),  Expect = 1e-45
 Identities = 63/74 (85%), Positives = 67/74 (91%), Gaps = 0/74 (0%)

Query  1   MARFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIK  60
           MARF+RRRKFCRFTAE V  IDYKD+DTLK YITE GKIVPSRITGTKARYQRQLA AIK
Sbjct  1   MARFFRRRKFCRFTAEGVKEIDYKDLDTLKGYITETGKIVPSRITGTKARYQRQLATAIK  60

Query  61  QARYLALIPYTDNH  74
           +ARYLAL+PYTD H
Sbjct  61  RARYLALLPYTDGH  74


>Q4QN03 Small ribosomal subunit protein bS18 [Haemophilus influenzae 
(strain 86-028NP)]
Length=75

 Score = 129 bits (325),  Expect = 3e-45
 Identities = 61/75 (81%), Positives = 70/75 (93%), Gaps = 0/75 (0%)

Query  1   MARFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIK  60
           MAR++RRRKFCRFTAENV  IDYKDI TLK YI+E+GKIVPSRITGT+A+YQRQLA AIK
Sbjct  1   MARYFRRRKFCRFTAENVVEIDYKDIATLKNYISESGKIVPSRITGTRAKYQRQLARAIK  60

Query  61  QARYLALIPYTDNHK  75
           +ARYLAL+PYTDNH+
Sbjct  61  RARYLALLPYTDNHQ  75


>P66458 Small ribosomal subunit protein bS18 [Haemophilus ducreyi 
(strain 35000HP / ATCC 700724)]
Length=75

 Score = 129 bits (325),  Expect = 3e-45
 Identities = 61/75 (81%), Positives = 70/75 (93%), Gaps = 0/75 (0%)

Query  1   MARFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIK  60
           MAR++RRRKFCRFTAENV  IDYKDI TLK YI+E+GKIVPSRITGT+A+YQRQLA AIK
Sbjct  1   MARYFRRRKFCRFTAENVVEIDYKDIATLKNYISESGKIVPSRITGTRAKYQRQLARAIK  60

Query  61  QARYLALIPYTDNHK  75
           +ARYLAL+PYTDNH+
Sbjct  61  RARYLALLPYTDNHQ  75


>B0BQB1 Small ribosomal subunit protein bS18 [Actinobacillus pleuropneumoniae 
serotype 3 (strain JL03)]
Length=75

 Score = 129 bits (325),  Expect = 3e-45
 Identities = 61/75 (81%), Positives = 70/75 (93%), Gaps = 0/75 (0%)

Query  1   MARFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIK  60
           MAR++RRRKFCRFTAENV  IDYKDI TLK YI+E+GKIVPSRITGT+A+YQRQLA AIK
Sbjct  1   MARYFRRRKFCRFTAENVVEIDYKDIATLKNYISESGKIVPSRITGTRAKYQRQLARAIK  60

Query  61  QARYLALIPYTDNHK  75
           +ARYLAL+PYTDNH+
Sbjct  61  RARYLALLPYTDNHQ  75


>B3GY57 Small ribosomal subunit protein bS18 [Actinobacillus pleuropneumoniae 
serotype 7 (strain AP76)]
Length=75

 Score = 129 bits (325),  Expect = 3e-45
 Identities = 61/75 (81%), Positives = 70/75 (93%), Gaps = 0/75 (0%)

Query  1   MARFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIK  60
           MAR++RRRKFCRFTAENV  IDYKDI TLK YI+E+GKIVPSRITGT+A+YQRQLA AIK
Sbjct  1   MARYFRRRKFCRFTAENVVEIDYKDIATLKNYISESGKIVPSRITGTRAKYQRQLARAIK  60

Query  61  QARYLALIPYTDNHK  75
           +ARYLAL+PYTDNH+
Sbjct  61  RARYLALLPYTDNHQ  75


>B8F5T5 Small ribosomal subunit protein bS18 [Glaesserella parasuis 
serovar 5 (strain SH0165)]
Length=75

 Score = 129 bits (325),  Expect = 3e-45
 Identities = 61/75 (81%), Positives = 70/75 (93%), Gaps = 0/75 (0%)

Query  1   MARFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIK  60
           MAR++RRRKFCRFTAENV  IDYKDI TLK YI+E+GKIVPSRITGT+A+YQRQLA AIK
Sbjct  1   MARYFRRRKFCRFTAENVVEIDYKDIATLKNYISESGKIVPSRITGTRAKYQRQLARAIK  60

Query  61  QARYLALIPYTDNHK  75
           +ARYLAL+PYTDNH+
Sbjct  61  RARYLALLPYTDNHQ  75


>P0A7T7 Small ribosomal subunit protein bS18 [Escherichia coli 
(strain K12)]
Length=75

 Score = 125 bits (313),  Expect = 2e-43
 Identities = 59/75 (79%), Positives = 68/75 (91%), Gaps = 0/75 (0%)

Query  1   MARFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIK  60
           MAR++RRRKFCRFTAE V  IDYKDI TLK YITE+GKIVPSRITGT+A+YQRQLA AIK
Sbjct  1   MARYFRRRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIK  60

Query  61  QARYLALIPYTDNHK  75
           +ARYL+L+PYTD H+
Sbjct  61  RARYLSLLPYTDRHQ  75


>P10806 Small ribosomal subunit protein bS18 [Geobacillus stearothermophilus]
Length=78

 Score = 93.6 bits (231),  Expect = 8e-31
 Identities = 40/65 (62%), Positives = 55/65 (85%), Gaps = 0/65 (0%)

Query  6   RRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIKQARYL  65
           +RRK C FTA N+ +IDYKD+D LK++I+E GKI+P R+TGT A+YQR+L +AIK+AR +
Sbjct  10  KRRKVCYFTANNITHIDYKDVDLLKKFISERGKILPRRVTGTSAKYQRKLTVAIKRARQM  69

Query  66  ALIPY  70
           AL+PY
Sbjct  70  ALLPY  74


>P21475 Small ribosomal subunit protein bS18 [Bacillus subtilis 
(strain 168)]
Length=79

 Score = 89.0 bits (219),  Expect = 6e-29
 Identities = 37/65 (57%), Positives = 53/65 (82%), Gaps = 0/65 (0%)

Query  6   RRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIKQARYL  65
           +RRK C FT+  + +IDYKD+D LK++++E GKI+P R+TGT A+YQR+L  AIK+AR +
Sbjct  11  KRRKVCYFTSNGITHIDYKDVDLLKKFVSERGKILPRRVTGTNAKYQRKLTAAIKRARQM  70

Query  66  ALIPY  70
           AL+PY
Sbjct  71  ALLPY  75


>O69301 Small ribosomal subunit protein bS18 [Campylobacter jejuni 
subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)]
Length=86

 Score = 73.6 bits (179),  Expect = 8e-23
 Identities = 33/68 (49%), Positives = 48/68 (71%), Gaps = 0/68 (0%)

Query  8   RKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIKQARYLAL  67
           RK+C++T   V +IDYKD   LK  ++E  KI+P R+TGT  +YQ  + +AIK+AR++AL
Sbjct  9   RKYCKYTEAKVEFIDYKDTAMLKHALSERFKIMPRRLTGTSKKYQEMVEVAIKRARHVAL  68

Query  68  IPYTDNHK  75
           IPY  + K
Sbjct  69  IPYIVDRK  76


>P24286 Small ribosomal subunit protein bS18 [Chlamydia muridarum 
(strain MoPn / Nigg)]
Length=81

 Score = 72.0 bits (175),  Expect = 3e-22
 Identities = 34/69 (49%), Positives = 50/69 (72%), Gaps = 3/69 (4%)

Query  5   YRRRKF---CRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIKQ  61
           +RR++F   C F +     IDYKD+ TLK++ITE GKI+P RITG  +R+Q  LA A+K+
Sbjct  9   HRRKRFAKKCPFVSAGWKTIDYKDVVTLKRFITERGKILPRRITGVSSRFQALLAQAVKR  68

Query  62  ARYLALIPY  70
           AR++ L+P+
Sbjct  69  ARHVGLLPF  77


>P15760 Small ribosomal subunit protein bS18c [Cyanophora paradoxa]
Length=71

 Score = 62.4 bits (150),  Expect = 1e-18
 Identities = 27/52 (52%), Positives = 40/52 (77%), Gaps = 0/52 (0%)

Query  21  IDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIKQARYLALIPYTD  72
           IDY+D++ L+ +IT+ GKI+P R+TG  A+ QR +  AIKQAR LAL+P+ +
Sbjct  17  IDYQDVELLRTFITDQGKILPRRVTGLTAKQQRAVTKAIKQARVLALLPFVN  68


>Q5SLQ0 Small ribosomal subunit protein bS18 [Thermus thermophilus 
(strain ATCC 27634 / DSM 579 / HB8)]
Length=88

 Score = 57.8 bits (138),  Expect = 1e-16
 Identities = 25/51 (49%), Positives = 39/51 (76%), Gaps = 0/51 (0%)

Query  22  DYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIKQARYLALIPYTD  72
           DY++++ LK++++E GKI+P R TG  A+ QR LA  IK+AR L L+P+T+
Sbjct  33  DYRNVEVLKRFLSETGKILPRRRTGLSAKEQRILAKTIKRARILGLLPFTE  83


>P30390 Small ribosomal subunit protein bS18c [Euglena gracilis]
Length=64

 Score = 51.2 bits (121),  Expect = 3e-14
 Identities = 24/54 (44%), Positives = 37/54 (69%), Gaps = 2/54 (4%)

Query  19  AYIDYKDIDTLKQYITENGKIVPSRITGTKARYQ--RQLALAIKQARYLALIPY  70
           A IDYK+++ L+++I   GKI+P R+   K  Y+  R L  ++KQARYL L+P+
Sbjct  5   ALIDYKNVNILRRFINFQGKIIPKRLNKPKLTYKQHRLLRKSVKQARYLGLLPF  58


>O20032 Small ribosomal subunit protein bS18c [Chlamydomonas reinhardtii]
Length=137

 Score = 49.3 bits (116),  Expect = 8e-13
 Identities = 26/62 (42%), Positives = 35/62 (56%), Gaps = 0/62 (0%)

Query  14   TAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIKQARYLALIPYTDN  73
            T  N  YIDYK    L++YI   GKI+P R T   A+ QR +A  IK AR + L+P+   
Sbjct  72   TLYNRRYIDYKHSGLLQRYIGLGGKILPRRQTRLTAKQQRFVAKTIKTARVMGLLPFVSK  131

Query  74   HK  75
             +
Sbjct  132  ER  133


>P49169 Small ribosomal subunit protein bS18c [Pisum sativum]
Length=110

 Score = 48.1 bits (113),  Expect = 1e-12
 Identities = 21/53 (40%), Positives = 36/53 (68%), Gaps = 0/53 (0%)

Query  21  IDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIKQARYLALIPYTDN  73
           IDYK++  L ++I+  GKI+  R+     + QR + +AIKQAR L+L+P+ ++
Sbjct  28  IDYKNLSLLFKFISRQGKILSRRVNKLTLKQQRLITIAIKQARILSLLPFVNS  80



Lambda      K        H        a         alpha
   0.334    0.143    0.430    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 81291


  Database: 6e8aff8f81b6e84b5f1de620d054275a.SwissProt.fasta
    Posted date:  May 20, 2024  7:25 PM
  Number of letters in database: 2,523
  Number of sequences in database:  32



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40