BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: c6c07fcb6fab86f0651f7747a0a63912.SwissProt.fasta
18 sequences; 4,399 total letters
Query= ACIAD2451
Length=232
Score E
Sequences producing significant alignments: (Bits) Value
Q9KTJ6 Probable D-methionine transport system permease protein Me... 187 5e-63
Q8ZH39 D-methionine transport system permease protein MetI [Yersi... 182 3e-61
Q8ZRN0 D-methionine transport system permease protein MetI [Salmo... 179 4e-60
Q8Z991 D-methionine transport system permease protein MetI [Salmo... 179 4e-60
Q8X800 D-methionine transport system permease protein MetI [Esche... 178 1e-59
P31547 D-methionine transport system permease protein MetI [Esche... 178 1e-59
O32168 Methionine import system permease protein MetP [Bacillus s... 165 1e-54
Q9CK96 Probable D-methionine transport system permease protein Me... 161 4e-53
P46492 Probable D-methionine transport system permease protein Me... 156 3e-51
O34742 Glycine betaine/carnitine/choline transport system permeas... 71.2 2e-18
Q9KHT8 Carnitine transport permease protein OpuCB [Listeria monoc... 69.3 9e-18
G2JZ43 Carnitine transport permease protein OpuCB [Listeria monoc... 69.3 9e-18
P39775 Choline transport system permease protein OpuBD [Bacillus ... 67.4 5e-17
E0SCY2 Glycine betaine/choline transport system permease protein ... 63.2 5e-15
Q45461 Choline transport system permease protein OpuBB [Bacillus ... 61.2 7e-15
Q8ZPK3 Osmoprotectant import permease protein OsmW [Salmonella ty... 60.1 2e-14
P17327 Glycine betaine/proline betaine transport system permease ... 60.5 3e-14
P14176 Glycine betaine/proline betaine transport system permease ... 59.3 8e-14
>Q9KTJ6 Probable D-methionine transport system permease protein
MetI [Vibrio cholerae serotype O1 (strain ATCC 39315 / El
Tor Inaba N16961)]
Length=225
Score = 187 bits (474), Expect = 5e-63
Identities = 93/208 (45%), Positives = 148/208 (71%), Gaps = 0/208 (0%)
Query 20 SLSIDQFVTALQETFHMVFFSLLFGGIWGFIQGIVLLVTRPAGILPNRFIYHLLNPIVNA 79
+L+ D +TA +T +MV + G G G++L T+ G+L N + L +VN
Sbjct 11 ALNSDLLLTATWQTLYMVAIAGAVGFALGIPLGVILHTTKKEGLLENLPLNRALGAVVNI 70
Query 80 LRSLPFIILLIAVIPLTKFLVGSSIGTWAAIVPLTIYIGPYMGRLIETSLLEVNEGIIES 139
RS+PF++L++A+IP+TK +VG+ IGT AAIVPLTI P++ RLIE++LLEV G++E+
Sbjct 71 GRSVPFLVLMVAIIPVTKLIVGTFIGTTAAIVPLTIGAIPFVARLIESALLEVPTGLVEA 130
Query 140 AQAMGASPFQIIFKFILPESRSSLILNLTTATISLIGATAMAGAVGAGGIGDLAISYGYQ 199
AQ+MGA+P QII K +LPE+ +++ ++T ++L+ +AMAG VG GG+GD+AI YG+
Sbjct 131 AQSMGATPLQIIRKVLLPEALPTILNSVTITLVTLVSYSAMAGTVGGGGLGDVAIRYGFH 190
Query 200 RFDTSVVILTVIILLLLVQFIQMLGNWL 227
R+D +++ +TV++L++LVQ IQ +G+ L
Sbjct 191 RYDITIMAVTVVMLIVLVQIIQSIGDAL 218
>Q8ZH39 D-methionine transport system permease protein MetI [Yersinia
pestis]
Length=217
Score = 182 bits (462), Expect = 3e-61
Identities = 91/198 (46%), Positives = 135/198 (68%), Gaps = 0/198 (0%)
Query 32 ETFHMVFFSLLFGGIWGFIQGIVLLVTRPAGILPNRFIYHLLNPIVNALRSLPFIILLIA 91
ET M F S FG + G G++L VTRP I+ N IY L+ +VN RS+PFIILL+
Sbjct 15 ETLMMTFVSGFFGFVLGLPVGVLLYVTRPGQIIANNKIYRTLSGVVNIFRSIPFIILLVW 74
Query 92 VIPLTKFLVGSSIGTWAAIVPLTIYIGPYMGRLIETSLLEVNEGIIESAQAMGASPFQII 151
+IP T+ +VG+SIG AAIVPLT+ P++ R++E +LLE+ G++E+A+AMGA+P QII
Sbjct 75 MIPFTRMIVGTSIGLQAAIVPLTVGAAPFIARMVENALLEIPSGLVEAARAMGATPMQII 134
Query 152 FKFILPESRSSLILNLTTATISLIGATAMAGAVGAGGIGDLAISYGYQRFDTSVVILTVI 211
K +LPE+ L+ T I+L+G +AM GAVGAGG+G + YGY ++ +V+ ++
Sbjct 135 KKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNATVMNTVLV 194
Query 212 ILLLLVQFIQMLGNWLSK 229
+L++LV IQ+ G+ + K
Sbjct 195 LLVILVYLIQLSGDRIVK 212
>Q8ZRN0 D-methionine transport system permease protein MetI [Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)]
Length=217
Score = 179 bits (454), Expect = 4e-60
Identities = 89/199 (45%), Positives = 135/199 (68%), Gaps = 0/199 (0%)
Query 27 VTALQETFHMVFFSLLFGGIWGFIQGIVLLVTRPAGILPNRFIYHLLNPIVNALRSLPFI 86
V + ET M F S FG + G G++L VTRP I+ N +Y L+ +VN RS+PFI
Sbjct 10 VRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIMENARLYRSLSAVVNIFRSIPFI 69
Query 87 ILLIAVIPLTKFLVGSSIGTWAAIVPLTIYIGPYMGRLIETSLLEVNEGIIESAQAMGAS 146
ILL+ +IP T+ +VG+SIG AAIVPLT+ P++ R++E +LLE+ G+IE+++AMGA+
Sbjct 70 ILLVWMIPFTRIIVGTSIGLQAAIVPLTVGAAPFIARMVENALLEIPAGLIEASRAMGAT 129
Query 147 PFQIIFKFILPESRSSLILNLTTATISLIGATAMAGAVGAGGIGDLAISYGYQRFDTSVV 206
P QI+ K +LPE+ L+ T I+L+G +AM GAVGAGG+G + YGY ++ +V+
Sbjct 130 PLQIVRKILLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNATVM 189
Query 207 ILTVIILLLLVQFIQMLGN 225
+++L++LV IQ+ G+
Sbjct 190 NTVLVLLVVLVYLIQLSGD 208
>Q8Z991 D-methionine transport system permease protein MetI [Salmonella
typhi]
Length=217
Score = 179 bits (454), Expect = 4e-60
Identities = 89/199 (45%), Positives = 135/199 (68%), Gaps = 0/199 (0%)
Query 27 VTALQETFHMVFFSLLFGGIWGFIQGIVLLVTRPAGILPNRFIYHLLNPIVNALRSLPFI 86
V + ET M F S FG + G G++L VTRP I+ N +Y L+ +VN RS+PFI
Sbjct 10 VRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIMENARLYRSLSAVVNIFRSIPFI 69
Query 87 ILLIAVIPLTKFLVGSSIGTWAAIVPLTIYIGPYMGRLIETSLLEVNEGIIESAQAMGAS 146
ILL+ +IP T+ +VG+SIG AAIVPLT+ P++ R++E +LLE+ G+IE+++AMGA+
Sbjct 70 ILLVWMIPFTRIIVGTSIGLQAAIVPLTVGAAPFIARIVENALLEIPAGLIEASRAMGAT 129
Query 147 PFQIIFKFILPESRSSLILNLTTATISLIGATAMAGAVGAGGIGDLAISYGYQRFDTSVV 206
P QI+ K +LPE+ L+ T I+L+G +AM GAVGAGG+G + YGY ++ +V+
Sbjct 130 PLQIVRKILLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNATVM 189
Query 207 ILTVIILLLLVQFIQMLGN 225
+++L++LV IQ+ G+
Sbjct 190 NTVLVLLVVLVYLIQLSGD 208
>Q8X800 D-methionine transport system permease protein MetI [Escherichia
coli O157:H7]
Length=217
Score = 178 bits (451), Expect = 1e-59
Identities = 89/199 (45%), Positives = 134/199 (67%), Gaps = 0/199 (0%)
Query 27 VTALQETFHMVFFSLLFGGIWGFIQGIVLLVTRPAGILPNRFIYHLLNPIVNALRSLPFI 86
V + ET M F S FG + G G++L VTRP I+ N +Y ++ IVN RS+PFI
Sbjct 10 VRGVWETLAMTFVSGFFGFVVGLPVGVLLYVTRPGQIIANAKLYRTVSAIVNIFRSIPFI 69
Query 87 ILLIAVIPLTKFLVGSSIGTWAAIVPLTIYIGPYMGRLIETSLLEVNEGIIESAQAMGAS 146
ILL+ +IP T+ +VG+SIG AAIVPLT+ P++ R++E +LLE+ G+IE+++AMGA+
Sbjct 70 ILLVWMIPFTRVIVGTSIGLQAAIVPLTVGAAPFIARMVENALLEIPTGLIEASRAMGAT 129
Query 147 PFQIIFKFILPESRSSLILNLTTATISLIGATAMAGAVGAGGIGDLAISYGYQRFDTSVV 206
P QI+ K +LPE+ L+ T I+L+G +AM GAVGAGG+G + YGY ++ +V+
Sbjct 130 PMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNATVM 189
Query 207 ILTVIILLLLVQFIQMLGN 225
+++L++LV IQ G+
Sbjct 190 NTVLVLLVILVYLIQFAGD 208
>P31547 D-methionine transport system permease protein MetI [Escherichia
coli (strain K12)]
Length=217
Score = 178 bits (451), Expect = 1e-59
Identities = 89/199 (45%), Positives = 134/199 (67%), Gaps = 0/199 (0%)
Query 27 VTALQETFHMVFFSLLFGGIWGFIQGIVLLVTRPAGILPNRFIYHLLNPIVNALRSLPFI 86
V + ET M F S FG + G G++L VTRP I+ N +Y ++ IVN RS+PFI
Sbjct 10 VRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIIANAKLYRTVSAIVNIFRSIPFI 69
Query 87 ILLIAVIPLTKFLVGSSIGTWAAIVPLTIYIGPYMGRLIETSLLEVNEGIIESAQAMGAS 146
ILL+ +IP T+ +VG+SIG AAIVPLT+ P++ R++E +LLE+ G+IE+++AMGA+
Sbjct 70 ILLVWMIPFTRVIVGTSIGLQAAIVPLTVGAAPFIARMVENALLEIPTGLIEASRAMGAT 129
Query 147 PFQIIFKFILPESRSSLILNLTTATISLIGATAMAGAVGAGGIGDLAISYGYQRFDTSVV 206
P QI+ K +LPE+ L+ T I+L+G +AM GAVGAGG+G + YGY ++ +V+
Sbjct 130 PMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNATVM 189
Query 207 ILTVIILLLLVQFIQMLGN 225
+++L++LV IQ G+
Sbjct 190 NTVLVLLVILVYLIQFAGD 208
>O32168 Methionine import system permease protein MetP [Bacillus
subtilis (strain 168)]
Length=222
Score = 165 bits (418), Expect = 1e-54
Identities = 82/211 (39%), Positives = 137/211 (65%), Gaps = 0/211 (0%)
Query 20 SLSIDQFVTALQETFHMVFFSLLFGGIWGFIQGIVLLVTRPAGILPNRFIYHLLNPIVNA 79
++ + + A ET +M SLLF + G I G++L +T + N+ + ++ +VN
Sbjct 8 NVDLTELWNATYETLYMTLISLLFAFVIGVILGLLLFLTSKGSLWQNKAVNSVIAAVVNI 67
Query 80 LRSLPFIILLIAVIPLTKFLVGSSIGTWAAIVPLTIYIGPYMGRLIETSLLEVNEGIIES 139
RS+PF+IL+I ++ TKFLVG+ +G AA+ L I P+ RL+E +L EV++G+IE+
Sbjct 68 FRSIPFLILIILLLGFTKFLVGTILGPNAALPALVIGSAPFYARLVEIALREVDKGVIEA 127
Query 140 AQAMGASPFQIIFKFILPESRSSLILNLTTATISLIGATAMAGAVGAGGIGDLAISYGYQ 199
A++MGA IIFK ++PES +LI +T I+LIG+TA+AGA+G+GG+G+LA GYQ
Sbjct 128 AKSMGAKTSTIIFKVLIPESMPALISGITVTAIALIGSTAIAGAIGSGGLGNLAYVEGYQ 187
Query 200 RFDTSVVILTVIILLLLVQFIQMLGNWLSKL 230
+ V + + +L++V IQ++G+ ++ +
Sbjct 188 SNNADVTFVATVFILIIVFIIQIIGDLITNI 218
>Q9CK96 Probable D-methionine transport system permease protein
MetI [Pasteurella multocida (strain Pm70)]
Length=217
Score = 161 bits (408), Expect = 4e-53
Identities = 88/198 (44%), Positives = 131/198 (66%), Gaps = 0/198 (0%)
Query 32 ETFHMVFFSLLFGGIWGFIQGIVLLVTRPAGILPNRFIYHLLNPIVNALRSLPFIILLIA 91
ET +M F + LF + G G++ +T IL NR +LN I+N RS+PFIILLI
Sbjct 15 ETLYMGFIATLFAIVIGLPIGLLAFLTGKGEILENRRANQVLNVIINIGRSVPFIILLII 74
Query 92 VIPLTKFLVGSSIGTWAAIVPLTIYIGPYMGRLIETSLLEVNEGIIESAQAMGASPFQII 151
++P T+ +VG+++GT AAIVPL++ P+ RL +LLE+ G+ E+A++MGA+ +QI+
Sbjct 75 LLPFTRLVVGTTLGTTAAIVPLSVSAIPFFARLTANALLEIPSGLTEAAKSMGATNWQIV 134
Query 152 FKFILPESRSSLILNLTTATISLIGATAMAGAVGAGGIGDLAISYGYQRFDTSVVILTVI 211
K+ LPES LI +T ++LIG +AMAGAVG GG+G+LAI+YG R V + I
Sbjct 135 TKYYLPESIPILINGITLTLVALIGYSAMAGAVGGGGLGNLAITYGEHRNMIYVKWIATI 194
Query 212 ILLLLVQFIQMLGNWLSK 229
I++L+V Q LG+ L++
Sbjct 195 IIVLIVMLSQKLGDHLAE 212
>P46492 Probable D-methionine transport system permease protein
MetI [Haemophilus influenzae (strain ATCC 51907 / DSM 11121
/ KW20 / Rd)]
Length=213
Score = 156 bits (395), Expect = 3e-51
Identities = 87/202 (43%), Positives = 129/202 (64%), Gaps = 0/202 (0%)
Query 28 TALQETFHMVFFSLLFGGIWGFIQGIVLLVTRPAGILPNRFIYHLLNPIVNALRSLPFII 87
TA ET ++ F S L + G GI +T IL N + +LN I+N RS+PFII
Sbjct 7 TATYETVYISFASTLLAVLVGVPVGIWTFLTGKNEILQNNRTHFVLNTIINIGRSIPFII 66
Query 88 LLIAVIPLTKFLVGSSIGTWAAIVPLTIYIGPYMGRLIETSLLEVNEGIIESAQAMGASP 147
LL+ ++P+T+F+VG+ +GT AAI+PL+I P++ RL +L+E+ G+ E+AQAMGA+
Sbjct 67 LLLILLPVTRFIVGTVLGTTAAIIPLSICAMPFVARLTANALMEIPNGLTEAAQAMGATK 126
Query 148 FQIIFKFILPESRSSLILNLTTATISLIGATAMAGAVGAGGIGDLAISYGYQRFDTSVVI 207
+QI+ KF L E+ +LI +T ++L+G +AMAG G GG+G LAI+YG R V
Sbjct 127 WQIVRKFYLSEALPTLINGVTLTLVTLVGYSAMAGTQGGGGLGSLAINYGRIRNMPYVTW 186
Query 208 LTVIILLLLVQFIQMLGNWLSK 229
+ II++L V Q LG+ L+K
Sbjct 187 VATIIIVLFVMISQKLGDTLAK 208
>O34742 Glycine betaine/carnitine/choline transport system permease
protein OpuCD [Bacillus subtilis (strain 168)]
Length=229
Score = 71.2 bits (173), Expect = 2e-18
Identities = 56/200 (28%), Positives = 99/200 (50%), Gaps = 11/200 (6%)
Query 30 LQETFHMVFFSLLFGGIWGFIQGIVLLVTRPAGILPNRFIYHLLNPIVNALRSLPFIILL 89
LQE F+ F ++G ++ I GI P GIL R Y L+ V A+ ++ I
Sbjct 19 LQE-FYRHFLMSVYGVLFAAIVGI------PLGILIAR--YRRLSGWVFAVTNVIQTIPA 69
Query 90 IAVIPLTKFLVGSSIGTWAAIVPLTIYIGPYMGRLIETSLLEVNEGIIESAQAMGASPFQ 149
+A++ + ++G +G I+ L +Y + R T ++ + +ES +AMG + FQ
Sbjct 70 LAMLAVLMLVMG--LGANTVILSLFLYSLLPIIRNTYTGIISIEHAYLESGKAMGMTKFQ 127
Query 150 IIFKFILPESRSSLILNLTTATISLIGATAMAGAVGAGGIGDLAISYGYQRFDTSVVILT 209
++ LP + S ++ L TA + IG TA+ VGAGG+GD+ + T++++
Sbjct 128 VLRMVELPLALSVIMAGLRTALVIAIGITAIGTFVGAGGLGDIIVRGSNATNGTAIILAG 187
Query 210 VIILLLLVQFIQMLGNWLSK 229
I L+ ++ WL +
Sbjct 188 AIPTALMAVIADLVMGWLER 207
>Q9KHT8 Carnitine transport permease protein OpuCB [Listeria monocytogenes]
Length=218
Score = 69.3 bits (168), Expect = 9e-18
Identities = 58/205 (28%), Positives = 101/205 (49%), Gaps = 17/205 (8%)
Query 23 IDQFVTALQETFHMVFFSL---LFGGIWGFIQGIVLLVTRPAGILPNRF--IYHLLNPIV 77
+D VT QE H + LF + I GI + V P GIL R + + + +V
Sbjct 1 MDAIVTFFQENGHNLLVQTWQHLFISLSAVILGIAVAV--PTGILLTRSPKVANFVIGVV 58
Query 78 NALRSLPFIILLIAVIPLTKFLVGSSIGTWAAIVPLTIYIGPYMGRLIETSLLEVNEGII 137
+ L+++P + +L +IP +GT AI+ L IY + R + V++ +I
Sbjct 59 SVLQTVPSLAILAFIIPFL------GVGTLPAIIALFIYALLPILRNTFIGVRGVDKNLI 112
Query 138 ESAQAMGASPFQIIFKFILPESRSSLILNLTTATISLIGATAMAGAVGAGGIGDLAISYG 197
ES + MG + +Q+I +P S S ++ + + + +I +A +GAGG+GD I G
Sbjct 113 ESGRGMGMTNWQLIVNVEIPNSISVIMAGIRLSAVYVIAWATLASYIGAGGLGDF-IFNG 171
Query 198 YQRFDTSVVI---LTVIILLLLVQF 219
+ +++ + V IL L+V+F
Sbjct 172 LNLYRPDLILGGAIPVTILALVVEF 196
>G2JZ43 Carnitine transport permease protein OpuCB [Listeria monocytogenes
serotype 1/2a (strain 10403S)]
Length=218
Score = 69.3 bits (168), Expect = 9e-18
Identities = 58/205 (28%), Positives = 101/205 (49%), Gaps = 17/205 (8%)
Query 23 IDQFVTALQETFHMVFFSL---LFGGIWGFIQGIVLLVTRPAGILPNRF--IYHLLNPIV 77
+D VT QE H + LF + I GI + V P GIL R + + + +V
Sbjct 1 MDAIVTFFQENGHNLLVQTWQHLFISLSAVILGIAVAV--PTGILLTRSPKVANFVIGVV 58
Query 78 NALRSLPFIILLIAVIPLTKFLVGSSIGTWAAIVPLTIYIGPYMGRLIETSLLEVNEGII 137
+ L+++P + +L +IP +GT AI+ L IY + R + V++ +I
Sbjct 59 SVLQTVPSLAILAFIIPFL------GVGTLPAIIALFIYALLPILRNTFIGVRGVDKNLI 112
Query 138 ESAQAMGASPFQIIFKFILPESRSSLILNLTTATISLIGATAMAGAVGAGGIGDLAISYG 197
ES + MG + +Q+I +P S S ++ + + + +I +A +GAGG+GD I G
Sbjct 113 ESGRGMGMTNWQLIVNVEIPNSISVIMAGIRLSAVYVIAWATLASYIGAGGLGDF-IFNG 171
Query 198 YQRFDTSVVI---LTVIILLLLVQF 219
+ +++ + V IL L+V+F
Sbjct 172 LNLYRPDLILGGAIPVTILALVVEF 196
>P39775 Choline transport system permease protein OpuBD [Bacillus
subtilis (strain 168)]
Length=226
Score = 67.4 bits (163), Expect = 5e-17
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 22/214 (10%)
Query 18 NSSLSIDQFVTALQETFHMVFFSLLFGGIWGFIQGIVLLVTRPAGILPNRF--IYHLLNP 75
N S +D+F F M + +LF + G PAGIL F + +
Sbjct 14 NGSYVMDEF----GRHFLMSAYGVLFAAVVGV----------PAGILIAHFRRLSAWVFA 59
Query 76 IVNALRSLPFIILLIAVIPLTKFLVGSSIGTWAAIVPLTIYIGPYMGRLIETSLLEVNEG 135
+ N ++++P + +L AV+ L +G I+ L +Y + R T ++ +
Sbjct 60 VTNVIQTIPALAML-AVLMLVM-----GLGANTVILSLFLYSLLPIIRNTYTGIISIEHA 113
Query 136 IIESAQAMGASPFQIIFKFILPESRSSLILNLTTATISLIGATAMAGAVGAGGIGDLAIS 195
+ES +AMG + FQ++ LP + S ++ L TA + IG TA+ VGAGG+GD+ +
Sbjct 114 YLESGKAMGMTKFQVLRMVELPLALSVIMAGLRTALVIAIGITAIGTFVGAGGLGDMIVR 173
Query 196 YGYQRFDTSVVILTVIILLLLVQFIQMLGNWLSK 229
T++++ I ++ +L WL +
Sbjct 174 GSNATNGTAIILAGAIPTAVMAVGADLLMAWLER 207
>E0SCY2 Glycine betaine/choline transport system permease protein
OusW [Dickeya dadantii (strain 3937)]
Length=406
Score = 63.2 bits (152), Expect = 5e-15
Identities = 49/196 (25%), Positives = 92/196 (47%), Gaps = 19/196 (10%)
Query 33 TFHMVFFSLLFGGIWGFIQGIVLLVTRPAGILPNRFIYHLLNPIVNALRSLPFIILLIAV 92
T +V +L F I G GI L + A ++ P+++A+++ P + LI +
Sbjct 197 TLALVLTALFFCVIIGLPLGIWLAHSDRAA--------RIVRPLLDAMQTTPAFVYLIPI 248
Query 93 IPLTKFLVGSSIGTWAAIVPLTIYIGPYMGRLIETSLLEVNEGIIESAQAMGASPFQIIF 152
+ L IG +V I+ P + RL + +V ++E+AQ+ GASP Q++F
Sbjct 249 VMLF------GIGNVPGVVVTIIFALPPIIRLTILGIRQVPADLVEAAQSFGASPRQMLF 302
Query 153 KFILPESRSSLILNLTTATISLIGATAMAGAVGAGGIGDLAISYGYQRFDTSVVIL---- 208
K LP + +++ + + + +A + GG+G + + G R D + +
Sbjct 303 KVQLPLAMPTIMAGINQTLMLALSMVVIASMIAVGGLGQMVLR-GIGRLDMGLASIGGVG 361
Query 209 TVIILLLLVQFIQMLG 224
VI+ ++L + Q LG
Sbjct 362 IVILAIILDRLTQSLG 377
>Q45461 Choline transport system permease protein OpuBB [Bacillus
subtilis (strain 168)]
Length=217
Score = 61.2 bits (147), Expect = 7e-15
Identities = 53/196 (27%), Positives = 95/196 (48%), Gaps = 19/196 (10%)
Query 30 LQETFHMVFFSLLFGGIWGFIQGIVLLVTRPAGILPNRFIYHL--LNPIVNALRSLPFII 87
L +T+ + SL+ I G+++ V P G++ R + IVN +++LP +
Sbjct 16 LYKTYEHITISLI-----AVILGVLVAV--PLGVVLTRMKKGAGTIIGIVNIIQTLPSLA 68
Query 88 LLIAVIPLTKFLVGSSIGTWAAIVPLTIYIGPYMGRLIETSLLEVNEGIIESAQAMGASP 147
+L IPL +G AIV L Y + R T + VN+ ++ES + +G +P
Sbjct 69 ILAFFIPLL------GVGKVPAIVALFFYSVLPILRNTYTGIRGVNKNLLESGKGIGMTP 122
Query 148 FQIIFKFILPESRSSLILNLTTATISLIGATAMAGAVGAGGIGDLAISYGYQRFDTSVVI 207
+ + LP + ++ + T+TI LIG +A +G GG+GD I G + +I
Sbjct 123 AEQVRLVELPLAAPVIMAGIRTSTIYLIGWATLASFIGGGGLGDY-IFIGLNLYQPEYII 181
Query 208 ---LTVIILLLLVQFI 220
+ V IL +++ ++
Sbjct 182 GGAVPVTILAIVIDYV 197
>Q8ZPK3 Osmoprotectant import permease protein OsmW [Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)]
Length=215
Score = 60.1 bits (144), Expect = 2e-14
Identities = 51/189 (27%), Positives = 93/189 (49%), Gaps = 8/189 (4%)
Query 40 SLLFGGIW--GFIQGIVLLVTRPAGILPNRFIYHLLNPIVNA---LRSLPFIILLIAVIP 94
SL F +W G+ +++ P G+L R + L P++ A L ++P I L +IP
Sbjct 16 SLTFQHLWLVALAVGLAIIIGVPLGVLIVRHKW-LATPVLGAATLLLTIPSIALFGLMIP 74
Query 95 LTKFLVGSSIGTWAAIVPLTIYIGPYMGRLIETSLLEVNEGIIESAQAMGASPFQIIFKF 154
L L+G IG A+ + +Y + R T+L + G+ E+ + +G + +Q +
Sbjct 75 LFS-LIGHGIGVLPAVTAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGMTFWQRLRWV 133
Query 155 ILPESRSSLILNLTTATISLIGATAMAGAVGAGGIGDLAISYGYQRFDTSVVILTVIILL 214
+P + + + TA + IG A+A +GAGG+G L ++ G D ++I +++
Sbjct 134 EIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLLLN-GISGSDIRMLIAGALMIC 192
Query 215 LLVQFIQML 223
LL + L
Sbjct 193 LLAIVLDWL 201
>P17327 Glycine betaine/proline betaine transport system permease
protein ProW [Salmonella typhimurium (strain LT2 / SGSC1412
/ ATCC 700720)]
Length=354
Score = 60.5 bits (145), Expect = 3e-14
Identities = 46/196 (23%), Positives = 93/196 (47%), Gaps = 19/196 (10%)
Query 33 TFHMVFFSLLFGGIWGFIQGIVLLVTRPAGILPNRFIYHLLNPIVNALRSLPFIILLIAV 92
T +V +LLF + G GI L + A ++ P+++A+++ P + L+ +
Sbjct 148 TLALVLTALLFCVVIGLPMGIWLARSPRAA--------KIVRPLLDAMQTTPAFVYLVPI 199
Query 93 IPLTKFLVGSSIGTWAAIVPLTIYIGPYMGRLIETSLLEVNEGIIESAQAMGASPFQIIF 152
+ L IG +V I+ P + RL + +V +IE++++ GASP Q++F
Sbjct 200 VMLF------GIGNVPGVVVTIIFALPPIVRLTILGINQVPADLIEASRSFGASPRQMLF 253
Query 153 KFILPESRSSLILNLTTATISLIGATAMAGAVGAGGIGDLAISYGYQRFDTSVVIL---- 208
K LP + +++ + + + +A + GG+G + + G R D + +
Sbjct 254 KVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVGGLGQMVLR-GIGRLDMGLATVGGVG 312
Query 209 TVIILLLLVQFIQMLG 224
VI+ ++L + Q +G
Sbjct 313 IVILAIILDRLTQAVG 328
Score = 16.5 bits (31), Expect = 8.4
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 23/115 (20%)
Query 12 LTQPFWNSSLSIDQFVTALQETFHMVFFSLLFGGIW--------GFIQGIVLLVTRPAGI 63
L PF + + +D +VT + + + F LF GI GF Q ++L + P I
Sbjct 53 LLDPFHKTLIPLDSWVTEGID-WVVTHFRPLFQGIRVPVDYILNGF-QQLLLGMPAPVAI 110
Query 64 LPNRFIYHLLNPIVNALRSLPFIILLIAVIPLTKFLVGSSIGTWA-AIVPLTIYI 117
+ I ++ + + +L I LIA+ +IG W+ A++ L + +
Sbjct 111 ILFALIAWQVSGVGMGIATL---ISLIAI---------GAIGAWSQAMITLALVL 153
>P14176 Glycine betaine/proline betaine transport system permease
protein ProW [Escherichia coli (strain K12)]
Length=354
Score = 59.3 bits (142), Expect = 8e-14
Identities = 46/196 (23%), Positives = 93/196 (47%), Gaps = 19/196 (10%)
Query 33 TFHMVFFSLLFGGIWGFIQGIVLLVTRPAGILPNRFIYHLLNPIVNALRSLPFIILLIAV 92
T +V +LLF + G GI L + A ++ P+++A+++ P + L+ +
Sbjct 148 TLALVLTALLFCIVIGLPLGIWLARSPRAA--------KIIRPLLDAMQTTPAFVYLVPI 199
Query 93 IPLTKFLVGSSIGTWAAIVPLTIYIGPYMGRLIETSLLEVNEGIIESAQAMGASPFQIIF 152
+ L IG +V I+ P + RL + +V +IE++++ GASP Q++F
Sbjct 200 VMLF------GIGNVPGVVVTIIFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLF 253
Query 153 KFILPESRSSLILNLTTATISLIGATAMAGAVGAGGIGDLAISYGYQRFDTSVVIL---- 208
K LP + +++ + + + +A + GG+G + + G R D + +
Sbjct 254 KVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVGGLGQMVLR-GIGRLDMGLATVGGVG 312
Query 209 TVIILLLLVQFIQMLG 224
VI+ ++L + Q +G
Sbjct 313 IVILAIILDRLTQAVG 328
Score = 16.5 bits (31), Expect = 8.4
Identities = 8/29 (28%), Positives = 15/29 (52%), Gaps = 1/29 (3%)
Query 90 IAVIPLTKFLVGSSIGTWA-AIVPLTIYI 117
+ V L + +IG W+ A+V L + +
Sbjct 125 MGVATLVSLIAIGAIGAWSQAMVTLALVL 153
Lambda K H a alpha
0.331 0.146 0.437 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 692170
Database: c6c07fcb6fab86f0651f7747a0a63912.SwissProt.fasta
Posted date: May 11, 2024 1:39 PM
Number of letters in database: 4,399
Number of sequences in database: 18
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40