BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 1082c6252c5110a3d534fb0d358a0822.TrEMBL.fasta
25 sequences; 5,203 total letters
Query= ACIAD2530
Length=199
Score E
Sequences producing significant alignments: (Bits) Value
A0A7G2SDV2 XRE family transcriptional regulator [Acinetobacter sp] 395 3e-146
Q6F9G8 Putative transcriptional regulator [Acinetobacter baylyi (... 395 3e-146
A0A0M1I681 XRE family transcriptional regulator [Acinetobacter sp... 392 6e-145
A0A1P8EF99 Helix-turn-helix domain-containing protein [Acinetobac... 392 6e-145
N9BKW4 HTH cro/C1-type domain-containing protein [Acinetobacter s... 392 6e-145
V2U9C3 HTH cro/C1-type domain-containing protein [Acinetobacter b... 382 6e-141
A0A4R0DII8 Helix-turn-helix domain-containing protein [Acinetobac... 380 2e-140
A0A4R0D4W2 Helix-turn-helix domain-containing protein [Acinetobac... 380 2e-140
N8V9U0 HTH cro/C1-type domain-containing protein [Acinetobacter s... 380 5e-140
A0A505MUU3 Helix-turn-helix domain-containing protein [Acinetobac... 375 3e-138
A0A2U3MXM7 HTH-type transcriptional regulator PuuR [Acinetobacter... 375 4e-138
A0A241UVG4 XRE family transcriptional regulator [Acinetobacter sp... 369 6e-136
A0A373B4E0 Helix-turn-helix domain-containing protein [Acinetobac... 369 6e-136
A0A4R0FJ53 Helix-turn-helix domain-containing protein [Acinetobac... 364 6e-134
A0A1V2UVG6 XRE family transcriptional regulator [Acinetobacter ge... 364 6e-134
Q49122 HTH cro/C1-type domain-containing protein [Methylorubrum e... 82.4 1e-23
A0A0G3HZV6 Transcriptional repressor [Escherichia coli (strain K12)] 68.9 4e-18
O31273 Aldehyde dehydrogenase [Azotobacter vinelandii] 52.4 5e-12
Q9FDA9 Regulator SinR [Bacillus thuringiensis] 48.1 5e-11
Q1EMV7 Putative DNA binding regulatory protein [Streptantibioticu... 48.5 1e-10
Q8VW60 HTH cro/C1-type domain-containing protein [Brucella abortus] 48.1 4e-10
Q1J1J5 Transcriptional regulator, XRE family [Deinococcus geother... 42.7 8e-09
Q3KZ22 Transcriptional regulator [Bifidobacterium breve] 40.0 1e-07
A0A5A4PWE0 DNA-binding helix-turn-helix domain-containing protein... 40.0 2e-07
>A0A7G2SDV2 XRE family transcriptional regulator [Acinetobacter
sp]
Length=198
Score = 395 bits (1016), Expect = 3e-146
Identities = 198/198 (100%), Positives = 198/198 (100%), Gaps = 0/198 (0%)
Query 1 MRQTKNSVKLEQYIGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR 60
MRQTKNSVKLEQYIGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR
Sbjct 1 MRQTKNSVKLEQYIGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR 60
Query 61 LCDVLGIPMSTLFSQYDQQESHAMLVKSGDGMEVVRRGTEKGHTYRLLTHSRGPRKNFEA 120
LCDVLGIPMSTLFSQYDQQESHAMLVKSGDGMEVVRRGTEKGHTYRLLTHSRGPRKNFEA
Sbjct 61 LCDVLGIPMSTLFSQYDQQESHAMLVKSGDGMEVVRRGTEKGHTYRLLTHSRGPRKNFEA 120
Query 121 YLVSMDDASEEFPTFAHPGTEMLYLVEGELIYRHGQEVFHMQPGDCLTLEGEIPHGPEKL 180
YLVSMDDASEEFPTFAHPGTEMLYLVEGELIYRHGQEVFHMQPGDCLTLEGEIPHGPEKL
Sbjct 121 YLVSMDDASEEFPTFAHPGTEMLYLVEGELIYRHGQEVFHMQPGDCLTLEGEIPHGPEKL 180
Query 181 VQVPIRLLSVMNYGSSEE 198
VQVPIRLLSVMNYGSSEE
Sbjct 181 VQVPIRLLSVMNYGSSEE 198
>Q6F9G8 Putative transcriptional regulator [Acinetobacter baylyi
(strain ATCC 33305 / BD413 / ADP1)]
Length=198
Score = 395 bits (1016), Expect = 3e-146
Identities = 198/198 (100%), Positives = 198/198 (100%), Gaps = 0/198 (0%)
Query 1 MRQTKNSVKLEQYIGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR 60
MRQTKNSVKLEQYIGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR
Sbjct 1 MRQTKNSVKLEQYIGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR 60
Query 61 LCDVLGIPMSTLFSQYDQQESHAMLVKSGDGMEVVRRGTEKGHTYRLLTHSRGPRKNFEA 120
LCDVLGIPMSTLFSQYDQQESHAMLVKSGDGMEVVRRGTEKGHTYRLLTHSRGPRKNFEA
Sbjct 61 LCDVLGIPMSTLFSQYDQQESHAMLVKSGDGMEVVRRGTEKGHTYRLLTHSRGPRKNFEA 120
Query 121 YLVSMDDASEEFPTFAHPGTEMLYLVEGELIYRHGQEVFHMQPGDCLTLEGEIPHGPEKL 180
YLVSMDDASEEFPTFAHPGTEMLYLVEGELIYRHGQEVFHMQPGDCLTLEGEIPHGPEKL
Sbjct 121 YLVSMDDASEEFPTFAHPGTEMLYLVEGELIYRHGQEVFHMQPGDCLTLEGEIPHGPEKL 180
Query 181 VQVPIRLLSVMNYGSSEE 198
VQVPIRLLSVMNYGSSEE
Sbjct 181 VQVPIRLLSVMNYGSSEE 198
>A0A0M1I681 XRE family transcriptional regulator [Acinetobacter
sp. C15]
Length=198
Score = 392 bits (1007), Expect = 6e-145
Identities = 196/198 (99%), Positives = 197/198 (99%), Gaps = 0/198 (0%)
Query 1 MRQTKNSVKLEQYIGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR 60
MR TKNSVKLEQYIGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR
Sbjct 1 MRHTKNSVKLEQYIGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR 60
Query 61 LCDVLGIPMSTLFSQYDQQESHAMLVKSGDGMEVVRRGTEKGHTYRLLTHSRGPRKNFEA 120
LC+VLGIPMSTLFSQYDQQESHAMLVKSGDGMEVVRRGTEKGHTYRLLTHSRGPRKNFEA
Sbjct 61 LCEVLGIPMSTLFSQYDQQESHAMLVKSGDGMEVVRRGTEKGHTYRLLTHSRGPRKNFEA 120
Query 121 YLVSMDDASEEFPTFAHPGTEMLYLVEGELIYRHGQEVFHMQPGDCLTLEGEIPHGPEKL 180
YLVSMDDASEEFPTFAHPGTEMLYLVEGELIYRHGQEVFHMQPGDCLTLEGEIPHGPEKL
Sbjct 121 YLVSMDDASEEFPTFAHPGTEMLYLVEGELIYRHGQEVFHMQPGDCLTLEGEIPHGPEKL 180
Query 181 VQVPIRLLSVMNYGSSEE 198
VQVPIRLLSVMNYGSSEE
Sbjct 181 VQVPIRLLSVMNYGSSEE 198
>A0A1P8EF99 Helix-turn-helix domain-containing protein [Acinetobacter
soli]
Length=198
Score = 392 bits (1007), Expect = 6e-145
Identities = 196/198 (99%), Positives = 197/198 (99%), Gaps = 0/198 (0%)
Query 1 MRQTKNSVKLEQYIGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR 60
MR TKNSVKLEQYIGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR
Sbjct 1 MRHTKNSVKLEQYIGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR 60
Query 61 LCDVLGIPMSTLFSQYDQQESHAMLVKSGDGMEVVRRGTEKGHTYRLLTHSRGPRKNFEA 120
LC+VLGIPMSTLFSQYDQQESHAMLVKSGDGMEVVRRGTEKGHTYRLLTHSRGPRKNFEA
Sbjct 61 LCEVLGIPMSTLFSQYDQQESHAMLVKSGDGMEVVRRGTEKGHTYRLLTHSRGPRKNFEA 120
Query 121 YLVSMDDASEEFPTFAHPGTEMLYLVEGELIYRHGQEVFHMQPGDCLTLEGEIPHGPEKL 180
YLVSMDDASEEFPTFAHPGTEMLYLVEGELIYRHGQEVFHMQPGDCLTLEGEIPHGPEKL
Sbjct 121 YLVSMDDASEEFPTFAHPGTEMLYLVEGELIYRHGQEVFHMQPGDCLTLEGEIPHGPEKL 180
Query 181 VQVPIRLLSVMNYGSSEE 198
VQVPIRLLSVMNYGSSEE
Sbjct 181 VQVPIRLLSVMNYGSSEE 198
>N9BKW4 HTH cro/C1-type domain-containing protein [Acinetobacter
soli NIPH 2899]
Length=198
Score = 392 bits (1007), Expect = 6e-145
Identities = 196/198 (99%), Positives = 197/198 (99%), Gaps = 0/198 (0%)
Query 1 MRQTKNSVKLEQYIGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR 60
MR TKNSVKLEQYIGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR
Sbjct 1 MRHTKNSVKLEQYIGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR 60
Query 61 LCDVLGIPMSTLFSQYDQQESHAMLVKSGDGMEVVRRGTEKGHTYRLLTHSRGPRKNFEA 120
LC+VLGIPMSTLFSQYDQQESHAMLVKSGDGMEVVRRGTEKGHTYRLLTHSRGPRKNFEA
Sbjct 61 LCEVLGIPMSTLFSQYDQQESHAMLVKSGDGMEVVRRGTEKGHTYRLLTHSRGPRKNFEA 120
Query 121 YLVSMDDASEEFPTFAHPGTEMLYLVEGELIYRHGQEVFHMQPGDCLTLEGEIPHGPEKL 180
YLVSMDDASEEFPTFAHPGTEMLYLVEGELIYRHGQEVFHMQPGDCLTLEGEIPHGPEKL
Sbjct 121 YLVSMDDASEEFPTFAHPGTEMLYLVEGELIYRHGQEVFHMQPGDCLTLEGEIPHGPEKL 180
Query 181 VQVPIRLLSVMNYGSSEE 198
VQVPIRLLSVMNYGSSEE
Sbjct 181 VQVPIRLLSVMNYGSSEE 198
>V2U9C3 HTH cro/C1-type domain-containing protein [Acinetobacter
brisouii CIP 110357]
Length=198
Score = 382 bits (981), Expect = 6e-141
Identities = 188/198 (95%), Positives = 194/198 (98%), Gaps = 0/198 (0%)
Query 1 MRQTKNSVKLEQYIGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR 60
MRQTKNS+KLEQYIGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR
Sbjct 1 MRQTKNSLKLEQYIGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR 60
Query 61 LCDVLGIPMSTLFSQYDQQESHAMLVKSGDGMEVVRRGTEKGHTYRLLTHSRGPRKNFEA 120
LC+VLGIPMSTLFSQYDQQESHAMLVKSGDGMEVVRRGTEKGHTYRL+THSRGPRKNFEA
Sbjct 61 LCEVLGIPMSTLFSQYDQQESHAMLVKSGDGMEVVRRGTEKGHTYRLITHSRGPRKNFEA 120
Query 121 YLVSMDDASEEFPTFAHPGTEMLYLVEGELIYRHGQEVFHMQPGDCLTLEGEIPHGPEKL 180
YLVSMDDASEEFPTFAHPGTEMLYLVEGEL+YRHG EVFHMQPGDCLTLEGEIPHGPEKL
Sbjct 121 YLVSMDDASEEFPTFAHPGTEMLYLVEGELLYRHGHEVFHMQPGDCLTLEGEIPHGPEKL 180
Query 181 VQVPIRLLSVMNYGSSEE 198
+QVPIRLLSVMNY +E
Sbjct 181 IQVPIRLLSVMNYAQPQE 198
>A0A4R0DII8 Helix-turn-helix domain-containing protein [Acinetobacter
sp. ANC 4635]
Length=198
Score = 380 bits (977), Expect = 2e-140
Identities = 187/198 (94%), Positives = 194/198 (98%), Gaps = 0/198 (0%)
Query 1 MRQTKNSVKLEQYIGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR 60
MRQ+KNS+KLEQYIGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR
Sbjct 1 MRQSKNSLKLEQYIGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR 60
Query 61 LCDVLGIPMSTLFSQYDQQESHAMLVKSGDGMEVVRRGTEKGHTYRLLTHSRGPRKNFEA 120
LC+VLGIPMSTLFSQYDQQESHAMLVKSGDGMEVVRRGTEKGHTYRL+THSRGPRKNFEA
Sbjct 61 LCEVLGIPMSTLFSQYDQQESHAMLVKSGDGMEVVRRGTEKGHTYRLITHSRGPRKNFEA 120
Query 121 YLVSMDDASEEFPTFAHPGTEMLYLVEGELIYRHGQEVFHMQPGDCLTLEGEIPHGPEKL 180
YLVSMDDASEEFPTFAHPGTEMLYLVEGEL+YRHG EVFHMQPGDCLTLEGEIPHGPEKL
Sbjct 121 YLVSMDDASEEFPTFAHPGTEMLYLVEGELLYRHGHEVFHMQPGDCLTLEGEIPHGPEKL 180
Query 181 VQVPIRLLSVMNYGSSEE 198
+QVPIRLLSVMNY +E
Sbjct 181 IQVPIRLLSVMNYAQPQE 198
>A0A4R0D4W2 Helix-turn-helix domain-containing protein [Acinetobacter
sp. ANC 4641]
Length=198
Score = 380 bits (977), Expect = 2e-140
Identities = 188/198 (95%), Positives = 194/198 (98%), Gaps = 0/198 (0%)
Query 1 MRQTKNSVKLEQYIGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR 60
MRQTKNS+KLEQYIGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR
Sbjct 1 MRQTKNSLKLEQYIGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR 60
Query 61 LCDVLGIPMSTLFSQYDQQESHAMLVKSGDGMEVVRRGTEKGHTYRLLTHSRGPRKNFEA 120
LC+VLGIPMSTLFSQYDQQESHAMLVKSGDGMEVVRRGTEKGHTYRL+THSRGPRKNFEA
Sbjct 61 LCEVLGIPMSTLFSQYDQQESHAMLVKSGDGMEVVRRGTEKGHTYRLITHSRGPRKNFEA 120
Query 121 YLVSMDDASEEFPTFAHPGTEMLYLVEGELIYRHGQEVFHMQPGDCLTLEGEIPHGPEKL 180
YLVSMDDASEEFPTFAHPGTEMLYLVEGEL+YRHG EVFHMQPGDCLTLEGEIPHGPEKL
Sbjct 121 YLVSMDDASEEFPTFAHPGTEMLYLVEGELLYRHGLEVFHMQPGDCLTLEGEIPHGPEKL 180
Query 181 VQVPIRLLSVMNYGSSEE 198
+QVPIRLLSVMNY +E
Sbjct 181 IQVPIRLLSVMNYTQPQE 198
>N8V9U0 HTH cro/C1-type domain-containing protein [Acinetobacter
sp. ANC 3789]
Length=198
Score = 380 bits (975), Expect = 5e-140
Identities = 187/198 (94%), Positives = 194/198 (98%), Gaps = 0/198 (0%)
Query 1 MRQTKNSVKLEQYIGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR 60
MRQ+KNS+KLEQYIGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR
Sbjct 1 MRQSKNSLKLEQYIGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR 60
Query 61 LCDVLGIPMSTLFSQYDQQESHAMLVKSGDGMEVVRRGTEKGHTYRLLTHSRGPRKNFEA 120
LC+VLGIPMSTLFSQYDQQESHAMLVKSGDGMEVVRRGTEKGHTYRL+THSRGPRKNFEA
Sbjct 61 LCEVLGIPMSTLFSQYDQQESHAMLVKSGDGMEVVRRGTEKGHTYRLITHSRGPRKNFEA 120
Query 121 YLVSMDDASEEFPTFAHPGTEMLYLVEGELIYRHGQEVFHMQPGDCLTLEGEIPHGPEKL 180
YLVSMDDASEEFPTFAHPGTEMLYLVEGEL+YRHG EVFHMQPGDCLTLEGEIPHGPEKL
Sbjct 121 YLVSMDDASEEFPTFAHPGTEMLYLVEGELLYRHGHEVFHMQPGDCLTLEGEIPHGPEKL 180
Query 181 VQVPIRLLSVMNYGSSEE 198
+QVPIRLLSVMNY +E
Sbjct 181 IQVPIRLLSVMNYTQPQE 198
>A0A505MUU3 Helix-turn-helix domain-containing protein [Acinetobacter
baumannii]
Length=198
Score = 375 bits (963), Expect = 3e-138
Identities = 185/198 (93%), Positives = 193/198 (97%), Gaps = 0/198 (0%)
Query 1 MRQTKNSVKLEQYIGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR 60
MRQTKNS+KLEQYIGIQIKRHRQ Q LKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR
Sbjct 1 MRQTKNSLKLEQYIGIQIKRHRQAQSLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR 60
Query 61 LCDVLGIPMSTLFSQYDQQESHAMLVKSGDGMEVVRRGTEKGHTYRLLTHSRGPRKNFEA 120
LC+VLGIPMSTLF+QYDQQESHAMLVKSG+GMEVVRRGTEKGHTY+L+THSRGPRKNFEA
Sbjct 61 LCEVLGIPMSTLFTQYDQQESHAMLVKSGEGMEVVRRGTEKGHTYQLMTHSRGPRKNFEA 120
Query 121 YLVSMDDASEEFPTFAHPGTEMLYLVEGELIYRHGQEVFHMQPGDCLTLEGEIPHGPEKL 180
YLVSMDDASEEFPTFAHPGTEMLYLVEGEL+YRHG EVFHMQPGDCLTLEGEIPHGPEKL
Sbjct 121 YLVSMDDASEEFPTFAHPGTEMLYLVEGELMYRHGHEVFHMQPGDCLTLEGEIPHGPEKL 180
Query 181 VQVPIRLLSVMNYGSSEE 198
V+VPIRLLSVMNYG EE
Sbjct 181 VKVPIRLLSVMNYGPGEE 198
>A0A2U3MXM7 HTH-type transcriptional regulator PuuR [Acinetobacter
stercoris]
Length=198
Score = 375 bits (962), Expect = 4e-138
Identities = 184/198 (93%), Positives = 193/198 (97%), Gaps = 0/198 (0%)
Query 1 MRQTKNSVKLEQYIGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR 60
MRQTKNS+KLEQYIGIQIKRHRQ Q LKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR
Sbjct 1 MRQTKNSLKLEQYIGIQIKRHRQAQDLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR 60
Query 61 LCDVLGIPMSTLFSQYDQQESHAMLVKSGDGMEVVRRGTEKGHTYRLLTHSRGPRKNFEA 120
LC+VLG+PMSTLFSQYDQQESHAMLVKSG+GMEVVRRGTEKGHTY+L+THSRGPRKNFEA
Sbjct 61 LCEVLGLPMSTLFSQYDQQESHAMLVKSGEGMEVVRRGTEKGHTYQLMTHSRGPRKNFEA 120
Query 121 YLVSMDDASEEFPTFAHPGTEMLYLVEGELIYRHGQEVFHMQPGDCLTLEGEIPHGPEKL 180
YLVSMDDASEEFPTFAHPGTEMLYLVEGEL+YRHG EVFHMQPGDCLTLEGEIPHGPEKL
Sbjct 121 YLVSMDDASEEFPTFAHPGTEMLYLVEGELMYRHGHEVFHMQPGDCLTLEGEIPHGPEKL 180
Query 181 VQVPIRLLSVMNYGSSEE 198
++VPIRLLSVMNYG EE
Sbjct 181 IKVPIRLLSVMNYGPGEE 198
>A0A241UVG4 XRE family transcriptional regulator [Acinetobacter
sp. ANC 4204]
Length=199
Score = 369 bits (948), Expect = 6e-136
Identities = 180/198 (91%), Positives = 193/198 (97%), Gaps = 0/198 (0%)
Query 1 MRQTKNSVKLEQYIGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR 60
M QTKNS+KLEQYIGIQIK+HRQEQ LKLSEVAQI+GISQGMLSKIENAQVSTSLETLSR
Sbjct 1 MSQTKNSLKLEQYIGIQIKKHRQEQSLKLSEVAQISGISQGMLSKIENAQVSTSLETLSR 60
Query 61 LCDVLGIPMSTLFSQYDQQESHAMLVKSGDGMEVVRRGTEKGHTYRLLTHSRGPRKNFEA 120
LC+VLGIPMSTLFSQYDQQES+AMLVKSG+GMEVVRRGTEKGHTY L+THSRGPRKNFEA
Sbjct 61 LCEVLGIPMSTLFSQYDQQESNAMLVKSGEGMEVVRRGTEKGHTYHLITHSRGPRKNFEA 120
Query 121 YLVSMDDASEEFPTFAHPGTEMLYLVEGELIYRHGQEVFHMQPGDCLTLEGEIPHGPEKL 180
YLVSMDDASEEFPTFAHPGTEMLYLVEGEL+YRHG E+FHMQPGDCLTLEGEIPHGPEKL
Sbjct 121 YLVSMDDASEEFPTFAHPGTEMLYLVEGELMYRHGHEIFHMQPGDCLTLEGEIPHGPEKL 180
Query 181 VQVPIRLLSVMNYGSSEE 198
++VPIRLLS+MNYGS+ E
Sbjct 181 IKVPIRLLSIMNYGSNGE 198
>A0A373B4E0 Helix-turn-helix domain-containing protein [Acinetobacter
sp. SWAC57]
Length=199
Score = 369 bits (948), Expect = 6e-136
Identities = 180/198 (91%), Positives = 193/198 (97%), Gaps = 0/198 (0%)
Query 1 MRQTKNSVKLEQYIGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR 60
M QTKNS+KLEQYIGIQIK+HRQEQ LKLSEVAQI+GISQGMLSKIENAQVSTSLETLSR
Sbjct 1 MSQTKNSLKLEQYIGIQIKKHRQEQSLKLSEVAQISGISQGMLSKIENAQVSTSLETLSR 60
Query 61 LCDVLGIPMSTLFSQYDQQESHAMLVKSGDGMEVVRRGTEKGHTYRLLTHSRGPRKNFEA 120
LC+VLGIPMSTLFSQYDQQES+AMLVKSG+GMEVVRRGTEKGHTY L+THSRGPRKNFEA
Sbjct 61 LCEVLGIPMSTLFSQYDQQESNAMLVKSGEGMEVVRRGTEKGHTYHLITHSRGPRKNFEA 120
Query 121 YLVSMDDASEEFPTFAHPGTEMLYLVEGELIYRHGQEVFHMQPGDCLTLEGEIPHGPEKL 180
YLVSMDDASEEFPTFAHPGTEMLYLVEGEL+YRHG E+FHMQPGDCLTLEGEIPHGPEKL
Sbjct 121 YLVSMDDASEEFPTFAHPGTEMLYLVEGELMYRHGHEIFHMQPGDCLTLEGEIPHGPEKL 180
Query 181 VQVPIRLLSVMNYGSSEE 198
++VPIRLLS+MNYGS+ E
Sbjct 181 IKVPIRLLSIMNYGSNGE 198
>A0A4R0FJ53 Helix-turn-helix domain-containing protein [Acinetobacter
sp. ANC 4173]
Length=198
Score = 364 bits (935), Expect = 6e-134
Identities = 178/198 (90%), Positives = 192/198 (97%), Gaps = 0/198 (0%)
Query 1 MRQTKNSVKLEQYIGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR 60
MRQTKNS+KLEQYIGIQIKRHRQEQGLKLSEVAQ+AGISQGMLSKIENAQVSTSL+TL R
Sbjct 1 MRQTKNSLKLEQYIGIQIKRHRQEQGLKLSEVAQMAGISQGMLSKIENAQVSTSLDTLIR 60
Query 61 LCDVLGIPMSTLFSQYDQQESHAMLVKSGDGMEVVRRGTEKGHTYRLLTHSRGPRKNFEA 120
LC+VLGI +STLFSQYDQQES+AMLV+SG+GMEVVRRGTEKGHTY LLTHSRGPRKNFEA
Sbjct 61 LCEVLGISVSTLFSQYDQQESNAMLVRSGEGMEVVRRGTEKGHTYSLLTHSRGPRKNFEA 120
Query 121 YLVSMDDASEEFPTFAHPGTEMLYLVEGELIYRHGQEVFHMQPGDCLTLEGEIPHGPEKL 180
YLV+MDDASEEFPTFAHPGTEMLYLVEGE++YRHG EVFHM PGDCLT EGEIPHGPEKL
Sbjct 121 YLVNMDDASEEFPTFAHPGTEMLYLVEGEMVYRHGDEVFHMLPGDCLTFEGEIPHGPEKL 180
Query 181 VQVPIRLLSVMNYGSSEE 198
++VPIRLLSVMNYG+SEE
Sbjct 181 IKVPIRLLSVMNYGTSEE 198
>A0A1V2UVG6 XRE family transcriptional regulator [Acinetobacter
genomosp. 33YU]
Length=198
Score = 364 bits (935), Expect = 6e-134
Identities = 178/198 (90%), Positives = 192/198 (97%), Gaps = 0/198 (0%)
Query 1 MRQTKNSVKLEQYIGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR 60
MRQTKNS+KLEQYIGIQIKRHRQEQGLKLSEVAQ+AGISQGMLSKIENAQVSTSL+TL R
Sbjct 1 MRQTKNSLKLEQYIGIQIKRHRQEQGLKLSEVAQMAGISQGMLSKIENAQVSTSLDTLIR 60
Query 61 LCDVLGIPMSTLFSQYDQQESHAMLVKSGDGMEVVRRGTEKGHTYRLLTHSRGPRKNFEA 120
LC+VLGI +STLFSQYDQQES+AMLV+SG+GMEVVRRGTEKGHTY LLTHSRGPRKNFEA
Sbjct 61 LCEVLGISVSTLFSQYDQQESNAMLVRSGEGMEVVRRGTEKGHTYSLLTHSRGPRKNFEA 120
Query 121 YLVSMDDASEEFPTFAHPGTEMLYLVEGELIYRHGQEVFHMQPGDCLTLEGEIPHGPEKL 180
YLV+MDDASEEFPTFAHPGTEMLYLVEGE++YRHG EVFHM PGDCLT EGEIPHGPEKL
Sbjct 121 YLVNMDDASEEFPTFAHPGTEMLYLVEGEMVYRHGDEVFHMLPGDCLTFEGEIPHGPEKL 180
Query 181 VQVPIRLLSVMNYGSSEE 198
++VPIRLLSVMNYG+SEE
Sbjct 181 IKVPIRLLSVMNYGTSEE 198
>Q49122 HTH cro/C1-type domain-containing protein [Methylorubrum
extorquens]
Length=139
Score = 82.4 bits (202), Expect = 1e-23
Identities = 45/125 (36%), Positives = 75/125 (60%), Gaps = 5/125 (4%)
Query 10 LEQYIGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSRLCDVLGIPM 69
LE+ +G QI+ R+E+ L + ++A AGISQGM+SKIEN +S SL +++ + L +P+
Sbjct 16 LEKALGYQIRMLRRERDLSVGDLAAAAGISQGMISKIENGTISPSLASINAIASALNVPI 75
Query 70 STLFSQYDQQE--SHAMLVKSGDGMEVVRRGTEKGHTYRLLTHSRGPRKNFEAYLVSMDD 127
+ LF+ +++ SH VK G G+ + RRG + GH Y LL + YL+++
Sbjct 76 TGLFTAFEETRDCSH---VKRGQGVPIERRGIKVGHLYELLGGGIRGDVVVQPYLITLKG 132
Query 128 ASEEF 132
+E +
Sbjct 133 EAETY 137
>A0A0G3HZV6 Transcriptional repressor [Escherichia coli (strain
K12)]
Length=185
Score = 68.9 bits (167), Expect = 4e-18
Identities = 38/161 (24%), Positives = 76/161 (47%), Gaps = 5/161 (3%)
Query 15 GIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSRLCDVLGIPMSTLFS 74
G ++ RQ+QGL A+++G++ +S IE +VS ++ TL +L V G+ +S FS
Sbjct 9 GKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFS 68
Query 75 QYDQQESHAMLVKSGDGMEVVRRGTEKGHTYRLLTHSRGPRKNFEAYLVSMDDASEEFPT 134
+ ++ + +++ D +E+ +G L H+ P + + +
Sbjct 69 EPEKPDEPQVVINQDDLIEMGSQGVS-----MKLVHNGNPNRTLAMIFETYQPGTTTGER 123
Query 135 FAHPGTEMLYLVEGELIYRHGQEVFHMQPGDCLTLEGEIPH 175
H G E+ ++EGE++ + +H+ G + IPH
Sbjct 124 IKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPH 164
>O31273 Aldehyde dehydrogenase [Azotobacter vinelandii]
Length=185
Score = 52.4 bits (124), Expect = 5e-12
Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 19/184 (10%)
Query 14 IGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSRLCDVLGIPMSTLF 73
+G++++ R+ +GL E+A+ AG++ +S IE VS S+ +L ++ GIPMS +
Sbjct 6 VGVRLQSIRKLKGLSQRELAKRAGVTNSTISMIEKNSVSPSISSLKKVLG--GIPMSLM- 62
Query 74 SQYDQQESHAMLVKSGDGMEVVRRGTEKGHTYRLLTHSRGPRKNFEAYLVSMDDASEEFP 133
E ++ +++ VV R E+ R L R K+ ++ S +P
Sbjct 63 ------EFFSLDLEAEASAPVVYRAAEQAELSRGLLSMRLIGKDHPDRALTF--LSVTYP 114
Query 134 TFAHPGTEML--------YLVEGELIYRHGQEVFHMQPGDCLTLEGEIPHGPEKLVQVPI 185
A G +L LVEG L + G++ + ++ GD L PH + P
Sbjct 115 PGADSGEALLLRDGEEAGILVEGRLELQVGEQRYTLESGDTYYLVAGQPHRFRNPFEAPA 174
Query 186 RLLS 189
+L+S
Sbjct 175 QLIS 178
>Q9FDA9 Regulator SinR [Bacillus thuringiensis]
Length=107
Score = 48.1 bits (113), Expect = 5e-11
Identities = 26/70 (37%), Positives = 46/70 (66%), Gaps = 1/70 (1%)
Query 14 IGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIE-NAQVSTSLETLSRLCDVLGIPMSTL 72
IG +IKR R ++G+ L+E+A+ AG+++ +S IE N Q + S++ L ++ VL IP+ TL
Sbjct 2 IGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTL 61
Query 73 FSQYDQQESH 82
+E++
Sbjct 62 LHDDTTKETN 71
>Q1EMV7 Putative DNA binding regulatory protein [Streptantibioticus
cattleyicolor]
Length=185
Score = 48.5 bits (114), Expect = 1e-10
Identities = 44/183 (24%), Positives = 83/183 (45%), Gaps = 15/183 (8%)
Query 14 IGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSRLCDVLGIPMSTLF 73
+G Q++R R+ +GL ++E+++++G+S+ LS +E+ + + ++ET+S + L +P+ L
Sbjct 11 VGAQVRRLREFRGLSVAELSRLSGVSRATLSMLESGRGNPTIETVSAIAVALRLPLGDL- 69
Query 74 SQYDQQESHAMLVKSGDGMEVVRRGTEKGHTYRL-LTHSRGPRKNFEAYLVSMDDASEEF 132
LV V+R GT + T R L G + E + + + A
Sbjct 70 -----------LVDPTPPEPVLRPGTPRPQTSRQDLLDRIGAGGHSEIWRLRLCGAGRRV 118
Query 133 PTFAHP-GT-EMLYLVEGELIYRHGQEVFHMQPGDCLTLEGEIPHGPEKLVQVPIRLLSV 190
+ H GT E + + G L + GD + + PH E + + + V
Sbjct 119 DSPPHTRGTLERVVALRGRLRLGPVDRPVVLATGDFVVFPADEPHFYEAVDDEDVDAVIV 178
Query 191 MNY 193
M Y
Sbjct 179 MTY 181
>Q8VW60 HTH cro/C1-type domain-containing protein [Brucella abortus]
Length=650
Score = 48.1 bits (113), Expect = 4e-10
Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 18/163 (11%)
Query 14 IGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSRLCDVLGIPMSTLF 73
IG+ + R R+ +GL L +A+++ IS+ +S +EN + LETL L + LGI L
Sbjct 7 IGMNLARLRKRRGLTLDGLAELSSISRAAISALENGAGNPRLETLWSLANALGIEFGELV 66
Query 74 SQYDQQESHAMLVKSGDGMEVVRRGTEKGHTYRLLTHSRGPRKNFEAYLVSMD-DASEEF 132
+ E V DG+ V RL+ PR EA+L+ + +A
Sbjct 67 GARNDVE-----VVEADGISV-----------RLIDRQTRPR-TVEAFLLDLPANAKRHA 109
Query 133 PTFAHPGTEMLYLVEGELIYRHGQEVFHMQPGDCLTLEGEIPH 175
H +E + ++ G + + G ++PH
Sbjct 110 DAHVHGVSENVVVLSGAIAVGPLSTPMLLHAGQSHQFAADVPH 152
>Q1J1J5 Transcriptional regulator, XRE family [Deinococcus geothermalis
(strain DSM 11300 / AG-3a)]
Length=140
Score = 42.7 bits (99), Expect = 8e-09
Identities = 24/72 (33%), Positives = 40/72 (56%), Gaps = 0/72 (0%)
Query 1 MRQTKNSVKLEQYIGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSR 60
MR + +++ + +++ R E+GL+L +VA+ AGIS LS +E + + SLETL
Sbjct 1 MRGNAAAEEVKMKLHERLRELRSERGLRLKDVAETAGISVPYLSDLERGRTNPSLETLQT 60
Query 61 LCDVLGIPMSTL 72
L I + L
Sbjct 61 LAGAYSITVHDL 72
>Q3KZ22 Transcriptional regulator [Bifidobacterium breve]
Length=169
Score = 40.0 bits (92), Expect = 1e-07
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 0/60 (0%)
Query 8 VKLEQYIGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSRLCDVLGI 67
V L IG ++ R L EV++ AG+S G LS++E Q S E LS + D LG+
Sbjct 92 VSLRGAIGHVLRDLRTRDRRTLREVSEKAGVSLGYLSEVERGQKEASSELLSSISDALGV 151
>A0A5A4PWE0 DNA-binding helix-turn-helix domain-containing protein
[Erysipelothrix rhusiopathiae]
Length=274
Score = 40.0 bits (92), Expect = 2e-07
Identities = 22/59 (37%), Positives = 34/59 (58%), Gaps = 0/59 (0%)
Query 14 IGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQVSTSLETLSRLCDVLGIPMSTL 72
I QIK +R EQ + +A+ IS+ +SK E + S++ L RL ++LGIP+ L
Sbjct 3 INQQIKFYRTEQKMSQDMLAEKLNISRQSISKWERGESLPSIDNLIRLSEILGIPLDDL 61
Lambda K H a alpha
0.319 0.135 0.385 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 652021
Database: 1082c6252c5110a3d534fb0d358a0822.TrEMBL.fasta
Posted date: Jun 3, 2024 3:17 PM
Number of letters in database: 5,203
Number of sequences in database: 25
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
