BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 07f304726d6ab579546ff7dd2119ca51.SwissProt.fasta
19 sequences; 3,612 total letters
Query= ACIAD2623
Length=194
Score E
Sequences producing significant alignments: (Bits) Value
Q9I4Z4 Peptidoglycan-associated lipoprotein [Pseudomonas aerugino... 135 5e-44
P0A138 Peptidoglycan-associated lipoprotein [Pseudomonas putida (... 131 1e-42
P0A139 Peptidoglycan-associated lipoprotein [Pseudomonas putida] 131 1e-42
P0A913 Peptidoglycan-associated lipoprotein [Escherichia coli O15... 113 2e-35
P0A914 Peptidoglycan-associated lipoprotein [Shigella flexneri] 113 2e-35
P0A912 Peptidoglycan-associated lipoprotein [Escherichia coli (st... 113 2e-35
P26493 Peptidoglycan-associated lipoprotein [Legionella pneumophila] 110 2e-34
Q51886 Peptidoglycan-associated lipoprotein [Pasteurella multocid... 101 5e-31
P10324 Peptidoglycan-associated lipoprotein [Haemophilus influenz... 101 5e-31
Q8U9L5 Peptidoglycan-associated lipoprotein [Agrobacterium fabrum... 98.6 1e-29
Q98F85 Peptidoglycan-associated lipoprotein [Mesorhizobium japoni... 98.2 1e-29
Q926C3 Peptidoglycan-associated lipoprotein [Rhizobium meliloti (... 95.9 1e-28
P0A3S8 Peptidoglycan-associated lipoprotein [Brucella suis biovar... 92.0 3e-27
P0A3S7 Peptidoglycan-associated lipoprotein [Brucella melitensis ... 92.0 3e-27
P0A3S9 Peptidoglycan-associated lipoprotein [Brucella abortus bio... 92.0 3e-27
Q05146 Outer membrane protein A [Bordetella avium] 68.9 3e-18
P07050 Outer membrane protein P.III [Neisseria gonorrhoeae] 55.5 4e-13
P0A0V3 Outer membrane protein class 4 [Neisseria meningitidis ser... 54.3 1e-12
P38369 Outer membrane protein Tpn50 [Treponema pallidum (strain N... 53.5 4e-12
>Q9I4Z4 Peptidoglycan-associated lipoprotein [Pseudomonas aeruginosa
(strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847
/ LMG 12228 / 1C / PRS 101 / PAO1)]
Length=168
Score = 135 bits (339), Expect = 5e-44
Identities = 81/180 (45%), Positives = 102/180 (57%), Gaps = 15/180 (8%)
Query 5 MNAMKLFVLPVLATAL-VMTGCASRKPAAPVSAANTPSTATTVSTEGLSEDAALNAKNLT 63
M +K LA A+ V GC+S+ A AN G+ +A A +
Sbjct 1 MEMLKFGKFAALALAMAVAVGCSSKGGDASGEGANG----------GVDPNAGYGANS-- 48
Query 64 GASAKGVTAANRAFLAKRVVHFDYDSSDLSTEDYQTLQAHAQFLIANANSRVALTGHTDE 123
+ G + A A +F+YDSSDL E + L HA+ L + RV L GHTDE
Sbjct 49 -GAVDGSLSDEAALRAITTFYFEYDSSDLKPEAMRALDVHAKDL-KGSGQRVVLEGHTDE 106
Query 124 RGTREYNMALGERRAKAVQSYLITNGVNPQQLEAVSYGKEMPINPGHNEAAWKENRRVEI 183
RGTREYNMALGERRAKAVQ YL+ GV+P QLE VSYGKE P+ GH+E +W +NRRVE+
Sbjct 107 RGTREYNMALGERRAKAVQRYLVLQGVSPAQLELVSYGKERPVATGHDEQSWAQNRRVEL 166
>P0A138 Peptidoglycan-associated lipoprotein [Pseudomonas putida
(strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 /
KT2440)]
Length=166
Score = 131 bits (330), Expect = 1e-42
Identities = 86/185 (46%), Positives = 108/185 (58%), Gaps = 27/185 (15%)
Query 5 MNAMKLFVLPVLATAL-VMTGCASRK-PAAPVSAANTPST---ATTVSTEG-LSEDAALN 58
M +K LA A+ V GC+S+ A AA P+ A T + +G LSE+AAL
Sbjct 1 MEMLKFGKFAALALAMAVAVGCSSKGGDNAGEGAAVDPNAGYGANTGAVDGSLSEEAALR 60
Query 59 AKNLTGASAKGVTAANRAFLAKRVVHFDYDSSDLSTEDYQTLQAHAQFLIANANSRVALT 118
A +F+YDSSDL E + L HA+ L AN N RV L
Sbjct 61 AIT--------------------TFYFEYDSSDLKPEAMRALDVHAKDLKANGN-RVVLE 99
Query 119 GHTDERGTREYNMALGERRAKAVQSYLITNGVNPQQLEAVSYGKEMPINPGHNEAAWKEN 178
G+TDERGTREYNMALGERRAKAVQ YL+ GV+P QLE VSYG+E P+ G++E +W +N
Sbjct 100 GNTDERGTREYNMALGERRAKAVQRYLVLQGVSPAQLELVSYGEERPVATGNDEQSWAQN 159
Query 179 RRVEI 183
RRVE+
Sbjct 160 RRVEL 164
>P0A139 Peptidoglycan-associated lipoprotein [Pseudomonas putida]
Length=166
Score = 131 bits (330), Expect = 1e-42
Identities = 86/185 (46%), Positives = 108/185 (58%), Gaps = 27/185 (15%)
Query 5 MNAMKLFVLPVLATAL-VMTGCASRK-PAAPVSAANTPST---ATTVSTEG-LSEDAALN 58
M +K LA A+ V GC+S+ A AA P+ A T + +G LSE+AAL
Sbjct 1 MEMLKFGKFAALALAMAVAVGCSSKGGDNAGEGAAVDPNAGYGANTGAVDGSLSEEAALR 60
Query 59 AKNLTGASAKGVTAANRAFLAKRVVHFDYDSSDLSTEDYQTLQAHAQFLIANANSRVALT 118
A +F+YDSSDL E + L HA+ L AN N RV L
Sbjct 61 AIT--------------------TFYFEYDSSDLKPEAMRALDVHAKDLKANGN-RVVLE 99
Query 119 GHTDERGTREYNMALGERRAKAVQSYLITNGVNPQQLEAVSYGKEMPINPGHNEAAWKEN 178
G+TDERGTREYNMALGERRAKAVQ YL+ GV+P QLE VSYG+E P+ G++E +W +N
Sbjct 100 GNTDERGTREYNMALGERRAKAVQRYLVLQGVSPAQLELVSYGEERPVATGNDEQSWAQN 159
Query 179 RRVEI 183
RRVE+
Sbjct 160 RRVEL 164
>P0A913 Peptidoglycan-associated lipoprotein [Escherichia coli
O157:H7]
Length=173
Score = 113 bits (282), Expect = 2e-35
Identities = 64/168 (38%), Positives = 94/168 (56%), Gaps = 3/168 (2%)
Query 21 VMTGCASRKPAAPVSAANTPSTATTVSTEG-LSEDAALNAKNLTG--ASAKGVTAANRAF 77
V+ G P ++A ++ A+ +EG L ++A G +S + +
Sbjct 6 VLKGLMIALPVMAIAACSSNKNASNDGSEGMLGAGTGMDANGGNGNMSSEEQARLQMQQL 65
Query 78 LAKRVVHFDYDSSDLSTEDYQTLQAHAQFLIANANSRVALTGHTDERGTREYNMALGERR 137
+V+FD D D+ ++ Q L AHA FL +N + +V + GH DERGT EYN++LGERR
Sbjct 66 QQNNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADERGTPEYNISLGERR 125
Query 138 AKAVQSYLITNGVNPQQLEAVSYGKEMPINPGHNEAAWKENRRVEINY 185
A AV+ YL GV+ Q+ VSYGKE P GH+EAA+ +NRR + Y
Sbjct 126 ANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYSKNRRAVLVY 173
>P0A914 Peptidoglycan-associated lipoprotein [Shigella flexneri]
Length=173
Score = 113 bits (282), Expect = 2e-35
Identities = 64/168 (38%), Positives = 94/168 (56%), Gaps = 3/168 (2%)
Query 21 VMTGCASRKPAAPVSAANTPSTATTVSTEG-LSEDAALNAKNLTG--ASAKGVTAANRAF 77
V+ G P ++A ++ A+ +EG L ++A G +S + +
Sbjct 6 VLKGLMIALPVMAIAACSSNKNASNDGSEGMLGAGTGMDANGGNGNMSSEEQARLQMQQL 65
Query 78 LAKRVVHFDYDSSDLSTEDYQTLQAHAQFLIANANSRVALTGHTDERGTREYNMALGERR 137
+V+FD D D+ ++ Q L AHA FL +N + +V + GH DERGT EYN++LGERR
Sbjct 66 QQNNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADERGTPEYNISLGERR 125
Query 138 AKAVQSYLITNGVNPQQLEAVSYGKEMPINPGHNEAAWKENRRVEINY 185
A AV+ YL GV+ Q+ VSYGKE P GH+EAA+ +NRR + Y
Sbjct 126 ANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYSKNRRAVLVY 173
>P0A912 Peptidoglycan-associated lipoprotein [Escherichia coli
(strain K12)]
Length=173
Score = 113 bits (282), Expect = 2e-35
Identities = 64/168 (38%), Positives = 94/168 (56%), Gaps = 3/168 (2%)
Query 21 VMTGCASRKPAAPVSAANTPSTATTVSTEG-LSEDAALNAKNLTG--ASAKGVTAANRAF 77
V+ G P ++A ++ A+ +EG L ++A G +S + +
Sbjct 6 VLKGLMIALPVMAIAACSSNKNASNDGSEGMLGAGTGMDANGGNGNMSSEEQARLQMQQL 65
Query 78 LAKRVVHFDYDSSDLSTEDYQTLQAHAQFLIANANSRVALTGHTDERGTREYNMALGERR 137
+V+FD D D+ ++ Q L AHA FL +N + +V + GH DERGT EYN++LGERR
Sbjct 66 QQNNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADERGTPEYNISLGERR 125
Query 138 AKAVQSYLITNGVNPQQLEAVSYGKEMPINPGHNEAAWKENRRVEINY 185
A AV+ YL GV+ Q+ VSYGKE P GH+EAA+ +NRR + Y
Sbjct 126 ANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYSKNRRAVLVY 173
>P26493 Peptidoglycan-associated lipoprotein [Legionella pneumophila]
Length=176
Score = 110 bits (276), Expect = 2e-34
Identities = 68/173 (39%), Positives = 98/173 (57%), Gaps = 10/173 (6%)
Query 15 VLATALVMTGCASRKPAAPVSAANTPSTATTVSTEGLSEDAALNAKNLTGASAKGVTAAN 74
++A+A+++ C+ +A AA AT +GL + + G S N
Sbjct 12 LVASAVLVAACSKTPGSADGGAAVGDGDATA---QGLGQMTHFAGQE-PGESYTTQAPHN 67
Query 75 RAFLAKRVVHFDYDSSDLSTEDYQTLQAHAQFLIANANSRVALTGHTDERGTREYNMALG 134
+ +L F YD S L+++ ++ A A++L + +RV + GHTDERG+REYN+ALG
Sbjct 68 QLYL------FAYDDSTLASKYLPSVNAQAEYLKTHPGARVMIAGHTDERGSREYNVALG 121
Query 135 ERRAKAVQSYLITNGVNPQQLEAVSYGKEMPINPGHNEAAWKENRRVEINYEA 187
ERRA V L GV+ QQ+ VSYGKE P N GH+EA+ +NRRVE YEA
Sbjct 122 ERRADTVAEILRMAGVSRQQIRVVSYGKERPANYGHDEASHAQNRRVEFIYEA 174
>Q51886 Peptidoglycan-associated lipoprotein [Pasteurella multocida
(strain Pm70)]
Length=150
Score = 101 bits (251), Expect = 5e-31
Identities = 51/103 (50%), Positives = 68/103 (66%), Gaps = 0/103 (0%)
Query 83 VHFDYDSSDLSTEDYQTLQAHAQFLIANANSRVALTGHTDERGTREYNMALGERRAKAVQ 142
V+F +D ++ E Q L AHA FL A ++V + G+TDERGT EYN+ALG+RRA AV+
Sbjct 48 VYFGFDKYNIEGEYVQILDAHAAFLNATPATKVVVEGNTDERGTPEYNIALGQRRADAVK 107
Query 143 SYLITNGVNPQQLEAVSYGKEMPINPGHNEAAWKENRRVEINY 185
YL GV Q+ VSYG+E P GH+EAA+ +NRR + Y
Sbjct 108 HYLSAKGVQAGQVSTVSYGEEKPAVLGHDEAAYSKNRRAVLAY 150
>P10324 Peptidoglycan-associated lipoprotein [Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=153
Score = 101 bits (251), Expect = 5e-31
Identities = 51/103 (50%), Positives = 70/103 (68%), Gaps = 0/103 (0%)
Query 83 VHFDYDSSDLSTEDYQTLQAHAQFLIANANSRVALTGHTDERGTREYNMALGERRAKAVQ 142
V+F +D D++ E Q L AHA +L A ++V + G+TDERGT EYN+ALG+RRA AV+
Sbjct 51 VYFGFDKYDITGEYVQILDAHAAYLNATPAAKVLVEGNTDERGTPEYNIALGQRRADAVK 110
Query 143 SYLITNGVNPQQLEAVSYGKEMPINPGHNEAAWKENRRVEINY 185
YL GV+ +L VSYG+E P GH+EAA+ +NRR + Y
Sbjct 111 GYLAGKGVDAGKLGTVSYGEEKPAVLGHDEAAYSKNRRAVLAY 153
>Q8U9L5 Peptidoglycan-associated lipoprotein [Agrobacterium fabrum
(strain C58 / ATCC 33970)]
Length=177
Score = 98.6 bits (244), Expect = 1e-29
Identities = 57/165 (35%), Positives = 86/165 (52%), Gaps = 21/165 (13%)
Query 16 LATALVMTGCASRKPAAPVSAANTPSTATTVSTEGLSEDAALNAKNLTGASAKGVTAANR 75
+ AL + GCA++K N P++A + G + ++ T V +R
Sbjct 24 MTLALALAGCANKK--------NMPNSAGELGLGGAGSATPGSQQDFT------VNVGDR 69
Query 76 AFLAKRVVHFDYDSSDLSTEDYQTLQAHAQFLIANANSRVALTGHTDERGTREYNMALGE 135
F FD DS+ + + QTLQ AQ+L N + + GH DERGTREYN+ALG
Sbjct 70 IF-------FDTDSTSIRADAQQTLQRQAQWLSRYPNYAITVEGHADERGTREYNLALGA 122
Query 136 RRAKAVQSYLITNGVNPQQLEAVSYGKEMPINPGHNEAAWKENRR 180
RRA A + +L + GV +++ +SYGKE P+ + + W +NRR
Sbjct 123 RRAAATRDFLASQGVPASRMKTISYGKEKPVAVCDDISCWSQNRR 167
>Q98F85 Peptidoglycan-associated lipoprotein [Mesorhizobium japonicum
(strain LMG 29417 / CECT 9101 / MAFF 303099)]
Length=168
Score = 98.2 bits (243), Expect = 1e-29
Identities = 59/169 (35%), Positives = 86/169 (51%), Gaps = 22/169 (13%)
Query 12 VLPVLATALVMTGCASRKPAAPVSAANTPSTATTVSTEGLSEDAALNAKNLTGASAKGVT 71
V+ L L + GCAS+K P +AA+ +T G ++D +N
Sbjct 12 VMIALVAMLAIAGCASKK--TPNNAADLGLNGAGAATPGSAQDFTVNI------------ 57
Query 72 AANRAFLAKRVVHFDYDSSDLSTEDYQTLQAHAQFLIANANSRVALTGHTDERGTREYNM 131
+R F FD DSS + + TL AQ+L + + GH DERGTREYN+
Sbjct 58 -GDRIF-------FDTDSSSIRADAQTTLARQAQWLNQYKQYAIVVEGHADERGTREYNL 109
Query 132 ALGERRAKAVQSYLITNGVNPQQLEAVSYGKEMPINPGHNEAAWKENRR 180
ALG RRA A + +L++ GV +L+ +SYGKE P+ + + W +NRR
Sbjct 110 ALGARRAAAARDFLVSKGVASSRLKTISYGKERPVAVCDDISCWSQNRR 158
>Q926C3 Peptidoglycan-associated lipoprotein [Rhizobium meliloti
(strain 1021)]
Length=176
Score = 95.9 bits (237), Expect = 1e-28
Identities = 59/169 (35%), Positives = 83/169 (49%), Gaps = 22/169 (13%)
Query 12 VLPVLATALVMTGCASRKPAAPVSAANTPSTATTVSTEGLSEDAALNAKNLTGASAKGVT 71
V+ L L + GCAS+K P AA +T G +D +N
Sbjct 20 VMIALVMTLALAGCASKKNL-PNDAAGL-GLGAGAATPGSQQDFTVNV------------ 65
Query 72 AANRAFLAKRVVHFDYDSSDLSTEDYQTLQAHAQFLIANANSRVALTGHTDERGTREYNM 131
+R F FD DS+ + + TL AQ+L N + + GH DERGTREYN+
Sbjct 66 -GDRIF-------FDTDSTSIRADAQATLDRQAQWLAKYPNYGITIEGHADERGTREYNL 117
Query 132 ALGERRAKAVQSYLITNGVNPQQLEAVSYGKEMPINPGHNEAAWKENRR 180
ALG RRA A + YL++ GV ++ +SYGKE P+ + + W +NRR
Sbjct 118 ALGARRAAATRDYLVSRGVPGNRMRTISYGKEKPVAVCDDISCWSQNRR 166
>P0A3S8 Peptidoglycan-associated lipoprotein [Brucella suis biovar
1 (strain 1330)]
Length=168
Score = 92.0 bits (227), Expect = 3e-27
Identities = 59/167 (35%), Positives = 82/167 (49%), Gaps = 26/167 (16%)
Query 16 LATALVMTGCASRKPAAPVSAANTPSTATTVSTEGLSEDAALNAKNLTGASAKGVTA--A 73
L +L + GCAS+K N P+ A D L A T S++ T
Sbjct 16 LFMSLAVAGCASKK--------NLPNNAG---------DLGLGAGAATPGSSQDFTVNVG 58
Query 74 NRAFLAKRVVHFDYDSSDLSTEDYQTLQAHAQFLIANANSRVALTGHTDERGTREYNMAL 133
+R F FD DSS + + QTL AQ+L + + GH DERGTREYN+AL
Sbjct 59 DRIF-------FDLDSSLIRADAQQTLSKQAQWLQRYPQYSITIEGHADERGTREYNLAL 111
Query 134 GERRAKAVQSYLITNGVNPQQLEAVSYGKEMPINPGHNEAAWKENRR 180
G+RRA A + +L + GV ++ +SYG E P+ + W +NRR
Sbjct 112 GQRRAAATRDFLASRGVPTNRMRTISYGNERPVAVCDADTCWSQNRR 158
>P0A3S7 Peptidoglycan-associated lipoprotein [Brucella melitensis
biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)]
Length=168
Score = 92.0 bits (227), Expect = 3e-27
Identities = 59/167 (35%), Positives = 82/167 (49%), Gaps = 26/167 (16%)
Query 16 LATALVMTGCASRKPAAPVSAANTPSTATTVSTEGLSEDAALNAKNLTGASAKGVTA--A 73
L +L + GCAS+K N P+ A D L A T S++ T
Sbjct 16 LFMSLAVAGCASKK--------NLPNNAG---------DLGLGAGAATPGSSQDFTVNVG 58
Query 74 NRAFLAKRVVHFDYDSSDLSTEDYQTLQAHAQFLIANANSRVALTGHTDERGTREYNMAL 133
+R F FD DSS + + QTL AQ+L + + GH DERGTREYN+AL
Sbjct 59 DRIF-------FDLDSSLIRADAQQTLSKQAQWLQRYPQYSITIEGHADERGTREYNLAL 111
Query 134 GERRAKAVQSYLITNGVNPQQLEAVSYGKEMPINPGHNEAAWKENRR 180
G+RRA A + +L + GV ++ +SYG E P+ + W +NRR
Sbjct 112 GQRRAAATRDFLASRGVPTNRMRTISYGNERPVAVCDADTCWSQNRR 158
>P0A3S9 Peptidoglycan-associated lipoprotein [Brucella abortus
biovar 1 (strain 9-941)]
Length=168
Score = 92.0 bits (227), Expect = 3e-27
Identities = 59/167 (35%), Positives = 82/167 (49%), Gaps = 26/167 (16%)
Query 16 LATALVMTGCASRKPAAPVSAANTPSTATTVSTEGLSEDAALNAKNLTGASAKGVTA--A 73
L +L + GCAS+K N P+ A D L A T S++ T
Sbjct 16 LFMSLAVAGCASKK--------NLPNNAG---------DLGLGAGAATPGSSQDFTVNVG 58
Query 74 NRAFLAKRVVHFDYDSSDLSTEDYQTLQAHAQFLIANANSRVALTGHTDERGTREYNMAL 133
+R F FD DSS + + QTL AQ+L + + GH DERGTREYN+AL
Sbjct 59 DRIF-------FDLDSSLIRADAQQTLSKQAQWLQRYPQYSITIEGHADERGTREYNLAL 111
Query 134 GERRAKAVQSYLITNGVNPQQLEAVSYGKEMPINPGHNEAAWKENRR 180
G+RRA A + +L + GV ++ +SYG E P+ + W +NRR
Sbjct 112 GQRRAAATRDFLASRGVPTNRMRTISYGNERPVAVCDADTCWSQNRR 158
>Q05146 Outer membrane protein A [Bordetella avium]
Length=194
Score = 68.9 bits (167), Expect = 3e-18
Identities = 39/99 (39%), Positives = 51/99 (52%), Gaps = 0/99 (0%)
Query 85 FDYDSSDLSTEDYQTLQAHAQFLIANANSRVALTGHTDERGTREYNMALGERRAKAVQSY 144
FD+D S L E Q L AQ A + G+TD GT YNM L ERRA +V++Y
Sbjct 89 FDFDKSTLKPEGRQLLDQVAQQARAIDLETIIAVGNTDSIGTEAYNMKLSERRAASVKAY 148
Query 145 LITNGVNPQQLEAVSYGKEMPINPGHNEAAWKENRRVEI 183
L++ G++P ++ GK PI NRRVEI
Sbjct 149 LVSKGIDPNRIYTEGKGKLNPIASNKTAEGRARNRRVEI 187
Score = 17.7 bits (34), Expect = 2.2
Identities = 9/27 (33%), Positives = 12/27 (44%), Gaps = 0/27 (0%)
Query 34 VSAANTPSTATTVSTEGLSEDAALNAK 60
++ NT S T LSE A + K
Sbjct 120 IAVGNTDSIGTEAYNMKLSERRAASVK 146
>P07050 Outer membrane protein P.III [Neisseria gonorrhoeae]
Length=236
Score = 55.5 bits (132), Expect = 4e-13
Identities = 30/78 (38%), Positives = 41/78 (53%), Gaps = 0/78 (0%)
Query 85 FDYDSSDLSTEDYQTLQAHAQFLIANANSRVALTGHTDERGTREYNMALGERRAKAVQSY 144
F +D L E L+ AQ L V + GHTD G+ +YN AL ERRA V +
Sbjct 99 FGFDKDSLRAEAQDNLKVLAQRLSRTNVQSVRVEGHTDFMGSEKYNQALSERRAYVVANN 158
Query 145 LITNGVNPQQLEAVSYGK 162
L++NGV ++ AV G+
Sbjct 159 LVSNGVPASRISAVGLGE 176
Score = 17.7 bits (34), Expect = 2.3
Identities = 14/46 (30%), Positives = 21/46 (46%), Gaps = 4/46 (9%)
Query 15 VLATALVMTGCASRKPAAPVSAANTPSTATTVSTEGLSEDAALNAK 60
V+A LV G PA+ +SA + ++ +E A L AK
Sbjct 154 VVANNLVSNGV----PASRISAVGLGESQAQMTQVCQAEVAKLGAK 195
>P0A0V3 Outer membrane protein class 4 [Neisseria meningitidis
serogroup B (strain MC58)]
Length=242
Score = 54.3 bits (129), Expect = 1e-12
Identities = 30/78 (38%), Positives = 41/78 (53%), Gaps = 0/78 (0%)
Query 85 FDYDSSDLSTEDYQTLQAHAQFLIANANSRVALTGHTDERGTREYNMALGERRAKAVQSY 144
F +D L E L+ AQ L V + GHTD G+ +YN AL ERRA V +
Sbjct 105 FGFDKDSLRAEAQDNLKVLAQRLSRTNVQSVRVEGHTDFMGSDKYNQALSERRAYVVANN 164
Query 145 LITNGVNPQQLEAVSYGK 162
L++NGV ++ AV G+
Sbjct 165 LVSNGVPVSRISAVGLGE 182
>P38369 Outer membrane protein Tpn50 [Treponema pallidum (strain
Nichols)]
Length=417
Score = 53.5 bits (127), Expect = 4e-12
Identities = 33/102 (32%), Positives = 52/102 (51%), Gaps = 1/102 (1%)
Query 83 VHFDYDSSDLSTEDYQTLQAHAQFLIANANSRVALTGHTDERGTREYNMALGERRAKAVQ 142
V FD DS+ L+ +Y+ L+ A+ L A + + ++GH RG+ + + E RA V
Sbjct 311 VQFDADSASLAPSEYEKLRKIAELLRAFPDRELLVSGHAARRGSVQDQQRISEERADVVA 370
Query 143 SYLITNG-VNPQQLEAVSYGKEMPINPGHNEAAWKENRRVEI 183
YL G V+ + G + I P +E ++NRRVEI
Sbjct 371 RYLQELGVVDAAHVYTRGCGAQQSIAPNDSEDGRRKNRRVEI 412
Score = 16.5 bits (31), Expect = 5.7
Identities = 13/41 (32%), Positives = 19/41 (46%), Gaps = 4/41 (10%)
Query 67 AKGVTAANRAFLAKRV----VHFDYDSSDLSTEDYQTLQAH 103
A GV +R+F V V DYD T +++ +AH
Sbjct 116 AFGVYDIDRSFFMPVVRNVPVFPDYDIEVGDTWEHEAEEAH 156
Lambda K H a alpha
0.316 0.127 0.356 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 445005
Database: 07f304726d6ab579546ff7dd2119ca51.SwissProt.fasta
Posted date: Jun 1, 2024 7:40 PM
Number of letters in database: 3,612
Number of sequences in database: 19
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
