BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 68d702d0ba09541af1ae4a4b6233d1ab.SwissProt.fasta
33 sequences; 9,693 total letters
Query= ACIAD2632
Length=236
Score E
Sequences producing significant alignments: (Bits) Value
O86235 Uncharacterized protein HI_1225.1 [Haemophilus influenzae ... 89.7 7e-25
A1JL00 DnaA regulatory inactivator Hda [Yersinia enterocolitica s... 74.7 3e-19
A6TCA8 DnaA regulatory inactivator Hda [Klebsiella pneumoniae sub... 73.9 5e-19
B5XNQ6 DnaA regulatory inactivator Hda [Klebsiella pneumoniae (st... 73.9 5e-19
Q668E8 DnaA regulatory inactivator Hda [Yersinia pseudotuberculos... 73.9 6e-19
A4TMP0 DnaA regulatory inactivator Hda [Yersinia pestis (strain P... 73.9 6e-19
Q1CK37 DnaA regulatory inactivator Hda [Yersinia pestis bv. Antiq... 73.9 6e-19
B2K9J7 DnaA regulatory inactivator Hda [Yersinia pseudotuberculos... 73.9 6e-19
Q1C5P5 DnaA regulatory inactivator Hda [Yersinia pestis bv. Antiq... 73.9 6e-19
A9QZX0 DnaA regulatory inactivator Hda [Yersinia pestis bv. Antiq... 73.9 6e-19
Q8ZCC1 DnaA regulatory inactivator Hda [Yersinia pestis] 73.9 6e-19
A7FG40 DnaA regulatory inactivator Hda [Yersinia pseudotuberculos... 73.9 6e-19
B7LKE6 DnaA regulatory inactivator Hda [Escherichia fergusonii (s... 73.6 7e-19
B2TXS1 DnaA regulatory inactivator Hda [Shigella boydii serotype ... 73.2 1e-18
Q1R8P2 DnaA regulatory inactivator Hda [Escherichia coli (strain ... 73.2 1e-18
B1LNE6 DnaA regulatory inactivator Hda [Escherichia coli (strain ... 73.2 1e-18
B6I568 DnaA regulatory inactivator Hda [Escherichia coli (strain ... 73.2 1e-18
P69931 DnaA regulatory inactivator Hda [Escherichia coli (strain ... 73.2 1e-18
A8AD95 DnaA regulatory inactivator Hda [Citrobacter koseri (strai... 72.0 3e-18
B5R558 DnaA regulatory inactivator Hda [Salmonella enteritidis PT... 71.6 4e-18
B5FQI8 DnaA regulatory inactivator Hda [Salmonella dublin (strain... 71.6 4e-18
Q57LL3 DnaA regulatory inactivator Hda [Salmonella choleraesuis (... 71.6 4e-18
A9MHP3 DnaA regulatory inactivator Hda [Salmonella arizonae (stra... 71.6 4e-18
B5F171 DnaA regulatory inactivator Hda [Salmonella agona (strain ... 71.6 4e-18
O87546 Chromosomal replication initiator protein DnaA [Treponema ... 60.1 1e-13
Q51896 Chromosomal replication initiator protein DnaA [Prochloroc... 59.3 2e-13
Q9X9D5 Chromosomal replication initiator protein DnaA [Thermus th... 57.0 1e-12
P05648 Chromosomal replication initiator protein DnaA [Bacillus s... 56.6 2e-12
P49995 Chromosomal replication initiator protein DnaA [Synechocys... 56.2 2e-12
O66659 Chromosomal replication initiator protein DnaA [Aquifex ae... 54.3 1e-11
P68867 Chromosomal replication initiator protein DnaA [Staphyloco... 54.3 1e-11
P33768 Chromosomal replication initiator protein DnaA [Borreliell... 53.9 2e-11
P46798 Chromosomal replication initiator protein DnaA [Thermotoga... 52.4 5e-11
>O86235 Uncharacterized protein HI_1225.1 [Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=231
Score = 89.7 bits (221), Expect = 7e-25
Identities = 66/211 (31%), Positives = 110/211 (52%), Gaps = 5/211 (2%)
Query 2 RQLQLDIEPQLDARISDFSGPGWGHVVDAVRQLHAGLMNRF-YIYGGAGSGKSHLLSAIC 60
+QL L I DA + +F G ++D++R+ + L F YI+G GSGK+HLL A
Sbjct 3 KQLPLPIHQIDDATLENFYGDNNLLLLDSLRKNSSDLKQPFFYIWGDKGSGKTHLLRAFS 62
Query 61 DSYLEIGKSAIKVSLLELLDAPIEAITSLERYDLVALDDIEAISGVPHWQKAVFHLINYN 120
+ YL ++AI V L + + +LE+ +LV LDD++++ G W+ A+F L N
Sbjct 63 NEYLINQRTAIYVPLSKSQYFSTAVLENLEQQELVCLDDLQSVIGNDEWELAIFDLFNRI 122
Query 121 NEVGGQ-LVFSSRVAPIELRLELPDLQSRLTQAVSVKLPNGSLFADRQALILSTMS-RRG 178
G L+ S+ +P L ++LPDL SRLT +L SL +++ +L + +RG
Sbjct 123 KASGKTLLLISADKSPSALSVKLPDLNSRLTWGEIYQL--NSLTDEQKIKVLQLAAYQRG 180
Query 179 LQFDPQILDYLLLHGPHQASLLLKTIAQLEK 209
Q + ++L+ L + + L+K
Sbjct 181 FQLSDETANFLITRLARDMHTLFEALDLLDK 211
>A1JL00 DnaA regulatory inactivator Hda [Yersinia enterocolitica
serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)]
Length=239
Score = 74.7 bits (182), Expect = 3e-19
Identities = 62/204 (30%), Positives = 96/204 (47%), Gaps = 5/204 (2%)
Query 27 VVDAVRQLHAGLMNRFYIYGGAGSGKSHLLSAICDSYLEIGKSAIKVSLLELLDAPIEAI 86
+ AV Q H + Y + G G+SHLL A C + G++ V L + E +
Sbjct 40 IQSAVHQSHGSYI---YFWSREGGGRSHLLHAACAELSQKGEAVGYVPLDKRAYFVPEVL 96
Query 87 TSLERYDLVALDDIEAISGVPHWQKAVFHLINYNNEVG-GQLVFSSRVAPIELRLELPDL 145
+E+ LV +D+IE I+G W+ A+F+L N E G +L+ + P +L L LPDL
Sbjct 97 DGMEQLALVCIDNIECIAGDEQWEMAMFNLYNRIVETGRTRLLITGDRPPRQLNLGLPDL 156
Query 146 QSRLTQAVSVKLPNGSLFADRQALILSTMSRRGLQFDPQILDYLLLHGPHQASLLLKTIA 205
SRL KL S QAL L RG + + +LL + L T+
Sbjct 157 ASRLDWGQIYKLQPLSDDEKLQALQLRA-KLRGFELPEDVGRFLLKRLDREMRTLFMTLD 215
Query 206 QLEKLLKGEKTKLSNATLRQIYAL 229
QL++ + KL+ +++I +L
Sbjct 216 QLDRASITAQRKLTIPFVKEILSL 239
>A6TCA8 DnaA regulatory inactivator Hda [Klebsiella pneumoniae
subsp. pneumoniae (strain ATCC 700721 / MGH 78578)]
Length=225
Score = 73.9 bits (180), Expect = 5e-19
Identities = 62/202 (31%), Positives = 97/202 (48%), Gaps = 5/202 (2%)
Query 29 DAVRQLHAGLMNRFYIYGGAGSGKSHLLSAICDSYLEIGKSAIKVSLLELLDAPIEAITS 88
+ +RQ H+G + YI+ G+G+SHLL A C + G + V L + E +
Sbjct 28 NVLRQEHSGYI---YIWSREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLEG 84
Query 89 LERYDLVALDDIEAISGVPHWQKAVFHLINYNNEVG-GQLVFSSRVAPIELRLELPDLQS 147
+E+ LV +D+IE ++G W+ A+F+L N E G +L+ + P +L L LPDL S
Sbjct 85 MEQLALVCIDNIECVAGDEPWEMAIFNLYNRILESGKTRLLITGDRPPRQLNLGLPDLAS 144
Query 148 RLTQAVSVKLPNGSLFADRQALILSTMSRRGLQFDPQILDYLLLHGPHQASLLLKTIAQL 207
RL KL S QAL L RG + + +LL + L T+ QL
Sbjct 145 RLDWGQIYKLQPLSDEDKLQALQLRA-RLRGFEMPEDVCRFLLKRLDREMRSLFMTLDQL 203
Query 208 EKLLKGEKTKLSNATLRQIYAL 229
+ + KL+ +++I L
Sbjct 204 DHASITAQRKLTIPFVKEILKL 225
>B5XNQ6 DnaA regulatory inactivator Hda [Klebsiella pneumoniae
(strain 342)]
Length=225
Score = 73.9 bits (180), Expect = 5e-19
Identities = 62/202 (31%), Positives = 97/202 (48%), Gaps = 5/202 (2%)
Query 29 DAVRQLHAGLMNRFYIYGGAGSGKSHLLSAICDSYLEIGKSAIKVSLLELLDAPIEAITS 88
+ +RQ H+G + YI+ G+G+SHLL A C + G + V L + E +
Sbjct 28 NVLRQEHSGYI---YIWSREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLEG 84
Query 89 LERYDLVALDDIEAISGVPHWQKAVFHLINYNNEVG-GQLVFSSRVAPIELRLELPDLQS 147
+E+ LV +D+IE ++G W+ A+F+L N E G +L+ + P +L L LPDL S
Sbjct 85 MEQLALVCIDNIECVAGDEPWEMAIFNLYNRILESGKTRLLITGDRPPRQLNLGLPDLAS 144
Query 148 RLTQAVSVKLPNGSLFADRQALILSTMSRRGLQFDPQILDYLLLHGPHQASLLLKTIAQL 207
RL KL S QAL L RG + + +LL + L T+ QL
Sbjct 145 RLDWGQIYKLQPLSDEDKLQALQLRA-RLRGFEMPEDVCRFLLKRLDREMRSLFMTLDQL 203
Query 208 EKLLKGEKTKLSNATLRQIYAL 229
+ + KL+ +++I L
Sbjct 204 DHASITAQRKLTIPFVKEILKL 225
>Q668E8 DnaA regulatory inactivator Hda [Yersinia pseudotuberculosis
serotype I (strain IP32953)]
Length=235
Score = 73.9 bits (180), Expect = 6e-19
Identities = 62/204 (30%), Positives = 96/204 (47%), Gaps = 5/204 (2%)
Query 27 VVDAVRQLHAGLMNRFYIYGGAGSGKSHLLSAICDSYLEIGKSAIKVSLLELLDAPIEAI 86
+ AV Q H + Y + G G+SHLL A C + G++ V L + E +
Sbjct 36 IQSAVHQPHGSYI---YFWSREGGGRSHLLHAACAELSQQGEAVGYVPLDKRAYFIPEVL 92
Query 87 TSLERYDLVALDDIEAISGVPHWQKAVFHLINYNNEVG-GQLVFSSRVAPIELRLELPDL 145
+E+ LV +D+IE I+G W+ A+F+L N E G +L+ + P +L L LPDL
Sbjct 93 EGMEQLALVCIDNIECIAGDEQWEMAMFNLYNRIVETGRTRLLITGDRPPRQLNLGLPDL 152
Query 146 QSRLTQAVSVKLPNGSLFADRQALILSTMSRRGLQFDPQILDYLLLHGPHQASLLLKTIA 205
SRL KL S QAL L RG + + +LL + L T+
Sbjct 153 ASRLDWGQIYKLQPLSDDEKLQALQLRA-KLRGFELPEDVGRFLLKRLDREMRTLFMTLD 211
Query 206 QLEKLLKGEKTKLSNATLRQIYAL 229
QL++ + KL+ +++I +L
Sbjct 212 QLDRASITAQRKLTIPFVKEILSL 235
>A4TMP0 DnaA regulatory inactivator Hda [Yersinia pestis (strain
Pestoides F)]
Length=235
Score = 73.9 bits (180), Expect = 6e-19
Identities = 62/204 (30%), Positives = 96/204 (47%), Gaps = 5/204 (2%)
Query 27 VVDAVRQLHAGLMNRFYIYGGAGSGKSHLLSAICDSYLEIGKSAIKVSLLELLDAPIEAI 86
+ AV Q H + Y + G G+SHLL A C + G++ V L + E +
Sbjct 36 IQSAVHQPHGSYI---YFWSREGGGRSHLLHAACAELSQQGEAVGYVPLDKRAYFIPEVL 92
Query 87 TSLERYDLVALDDIEAISGVPHWQKAVFHLINYNNEVG-GQLVFSSRVAPIELRLELPDL 145
+E+ LV +D+IE I+G W+ A+F+L N E G +L+ + P +L L LPDL
Sbjct 93 EGMEQLALVCIDNIECIAGDEQWEMAMFNLYNRIVETGRTRLLITGDRPPRQLNLGLPDL 152
Query 146 QSRLTQAVSVKLPNGSLFADRQALILSTMSRRGLQFDPQILDYLLLHGPHQASLLLKTIA 205
SRL KL S QAL L RG + + +LL + L T+
Sbjct 153 ASRLDWGQIYKLQPLSDDEKLQALQLRA-KLRGFELPEDVGRFLLKRLDREMRTLFMTLD 211
Query 206 QLEKLLKGEKTKLSNATLRQIYAL 229
QL++ + KL+ +++I +L
Sbjct 212 QLDRASITAQRKLTIPFVKEILSL 235
>Q1CK37 DnaA regulatory inactivator Hda [Yersinia pestis bv. Antiqua
(strain Nepal516)]
Length=235
Score = 73.9 bits (180), Expect = 6e-19
Identities = 62/204 (30%), Positives = 96/204 (47%), Gaps = 5/204 (2%)
Query 27 VVDAVRQLHAGLMNRFYIYGGAGSGKSHLLSAICDSYLEIGKSAIKVSLLELLDAPIEAI 86
+ AV Q H + Y + G G+SHLL A C + G++ V L + E +
Sbjct 36 IQSAVHQPHGSYI---YFWSREGGGRSHLLHAACAELSQQGEAVGYVPLDKRAYFIPEVL 92
Query 87 TSLERYDLVALDDIEAISGVPHWQKAVFHLINYNNEVG-GQLVFSSRVAPIELRLELPDL 145
+E+ LV +D+IE I+G W+ A+F+L N E G +L+ + P +L L LPDL
Sbjct 93 EGMEQLALVCIDNIECIAGDEQWEMAMFNLYNRIVETGRTRLLITGDRPPRQLNLGLPDL 152
Query 146 QSRLTQAVSVKLPNGSLFADRQALILSTMSRRGLQFDPQILDYLLLHGPHQASLLLKTIA 205
SRL KL S QAL L RG + + +LL + L T+
Sbjct 153 ASRLDWGQIYKLQPLSDDEKLQALQLRA-KLRGFELPEDVGRFLLKRLDREMRTLFMTLD 211
Query 206 QLEKLLKGEKTKLSNATLRQIYAL 229
QL++ + KL+ +++I +L
Sbjct 212 QLDRASITAQRKLTIPFVKEILSL 235
>B2K9J7 DnaA regulatory inactivator Hda [Yersinia pseudotuberculosis
serotype IB (strain PB1/+)]
Length=235
Score = 73.9 bits (180), Expect = 6e-19
Identities = 62/204 (30%), Positives = 96/204 (47%), Gaps = 5/204 (2%)
Query 27 VVDAVRQLHAGLMNRFYIYGGAGSGKSHLLSAICDSYLEIGKSAIKVSLLELLDAPIEAI 86
+ AV Q H + Y + G G+SHLL A C + G++ V L + E +
Sbjct 36 IQSAVHQPHGSYI---YFWSREGGGRSHLLHAACAELSQQGEAVGYVPLDKRAYFIPEVL 92
Query 87 TSLERYDLVALDDIEAISGVPHWQKAVFHLINYNNEVG-GQLVFSSRVAPIELRLELPDL 145
+E+ LV +D+IE I+G W+ A+F+L N E G +L+ + P +L L LPDL
Sbjct 93 EGMEQLALVCIDNIECIAGDEQWEMAMFNLYNRIVETGRTRLLITGDRPPRQLNLGLPDL 152
Query 146 QSRLTQAVSVKLPNGSLFADRQALILSTMSRRGLQFDPQILDYLLLHGPHQASLLLKTIA 205
SRL KL S QAL L RG + + +LL + L T+
Sbjct 153 ASRLDWGQIYKLQPLSDDEKLQALQLRA-KLRGFELPEDVGRFLLKRLDREMRTLFMTLD 211
Query 206 QLEKLLKGEKTKLSNATLRQIYAL 229
QL++ + KL+ +++I +L
Sbjct 212 QLDRASITAQRKLTIPFVKEILSL 235
>Q1C5P5 DnaA regulatory inactivator Hda [Yersinia pestis bv. Antiqua
(strain Antiqua)]
Length=235
Score = 73.9 bits (180), Expect = 6e-19
Identities = 62/204 (30%), Positives = 96/204 (47%), Gaps = 5/204 (2%)
Query 27 VVDAVRQLHAGLMNRFYIYGGAGSGKSHLLSAICDSYLEIGKSAIKVSLLELLDAPIEAI 86
+ AV Q H + Y + G G+SHLL A C + G++ V L + E +
Sbjct 36 IQSAVHQPHGSYI---YFWSREGGGRSHLLHAACAELSQQGEAVGYVPLDKRAYFIPEVL 92
Query 87 TSLERYDLVALDDIEAISGVPHWQKAVFHLINYNNEVG-GQLVFSSRVAPIELRLELPDL 145
+E+ LV +D+IE I+G W+ A+F+L N E G +L+ + P +L L LPDL
Sbjct 93 EGMEQLALVCIDNIECIAGDEQWEMAMFNLYNRIVETGRTRLLITGDRPPRQLNLGLPDL 152
Query 146 QSRLTQAVSVKLPNGSLFADRQALILSTMSRRGLQFDPQILDYLLLHGPHQASLLLKTIA 205
SRL KL S QAL L RG + + +LL + L T+
Sbjct 153 ASRLDWGQIYKLQPLSDDEKLQALQLRA-KLRGFELPEDVGRFLLKRLDREMRTLFMTLD 211
Query 206 QLEKLLKGEKTKLSNATLRQIYAL 229
QL++ + KL+ +++I +L
Sbjct 212 QLDRASITAQRKLTIPFVKEILSL 235
>A9QZX0 DnaA regulatory inactivator Hda [Yersinia pestis bv. Antiqua
(strain Angola)]
Length=239
Score = 73.9 bits (180), Expect = 6e-19
Identities = 62/204 (30%), Positives = 96/204 (47%), Gaps = 5/204 (2%)
Query 27 VVDAVRQLHAGLMNRFYIYGGAGSGKSHLLSAICDSYLEIGKSAIKVSLLELLDAPIEAI 86
+ AV Q H + Y + G G+SHLL A C + G++ V L + E +
Sbjct 40 IQSAVHQPHGSYI---YFWSREGGGRSHLLHAACAELSQQGEAVGYVPLDKRAYFIPEVL 96
Query 87 TSLERYDLVALDDIEAISGVPHWQKAVFHLINYNNEVG-GQLVFSSRVAPIELRLELPDL 145
+E+ LV +D+IE I+G W+ A+F+L N E G +L+ + P +L L LPDL
Sbjct 97 EGMEQLALVCIDNIECIAGDEQWEMAMFNLYNRIVETGRTRLLITGDRPPRQLNLGLPDL 156
Query 146 QSRLTQAVSVKLPNGSLFADRQALILSTMSRRGLQFDPQILDYLLLHGPHQASLLLKTIA 205
SRL KL S QAL L RG + + +LL + L T+
Sbjct 157 ASRLDWGQIYKLQPLSDDEKLQALQLRA-KLRGFELPEDVGRFLLKRLDREMRTLFMTLD 215
Query 206 QLEKLLKGEKTKLSNATLRQIYAL 229
QL++ + KL+ +++I +L
Sbjct 216 QLDRASITAQRKLTIPFVKEILSL 239
>Q8ZCC1 DnaA regulatory inactivator Hda [Yersinia pestis]
Length=239
Score = 73.9 bits (180), Expect = 6e-19
Identities = 62/204 (30%), Positives = 96/204 (47%), Gaps = 5/204 (2%)
Query 27 VVDAVRQLHAGLMNRFYIYGGAGSGKSHLLSAICDSYLEIGKSAIKVSLLELLDAPIEAI 86
+ AV Q H + Y + G G+SHLL A C + G++ V L + E +
Sbjct 40 IQSAVHQPHGSYI---YFWSREGGGRSHLLHAACAELSQQGEAVGYVPLDKRAYFIPEVL 96
Query 87 TSLERYDLVALDDIEAISGVPHWQKAVFHLINYNNEVG-GQLVFSSRVAPIELRLELPDL 145
+E+ LV +D+IE I+G W+ A+F+L N E G +L+ + P +L L LPDL
Sbjct 97 EGMEQLALVCIDNIECIAGDEQWEMAMFNLYNRIVETGRTRLLITGDRPPRQLNLGLPDL 156
Query 146 QSRLTQAVSVKLPNGSLFADRQALILSTMSRRGLQFDPQILDYLLLHGPHQASLLLKTIA 205
SRL KL S QAL L RG + + +LL + L T+
Sbjct 157 ASRLDWGQIYKLQPLSDDEKLQALQLRA-KLRGFELPEDVGRFLLKRLDREMRTLFMTLD 215
Query 206 QLEKLLKGEKTKLSNATLRQIYAL 229
QL++ + KL+ +++I +L
Sbjct 216 QLDRASITAQRKLTIPFVKEILSL 239
>A7FG40 DnaA regulatory inactivator Hda [Yersinia pseudotuberculosis
serotype O:1b (strain IP 31758)]
Length=239
Score = 73.9 bits (180), Expect = 6e-19
Identities = 62/204 (30%), Positives = 96/204 (47%), Gaps = 5/204 (2%)
Query 27 VVDAVRQLHAGLMNRFYIYGGAGSGKSHLLSAICDSYLEIGKSAIKVSLLELLDAPIEAI 86
+ AV Q H + Y + G G+SHLL A C + G++ V L + E +
Sbjct 40 IQSAVHQPHGSYI---YFWSREGGGRSHLLHAACAELSQQGEAVGYVPLDKRAYFIPEVL 96
Query 87 TSLERYDLVALDDIEAISGVPHWQKAVFHLINYNNEVG-GQLVFSSRVAPIELRLELPDL 145
+E+ LV +D+IE I+G W+ A+F+L N E G +L+ + P +L L LPDL
Sbjct 97 EGMEQLALVCIDNIECIAGDEQWEMAMFNLYNRIVETGRTRLLITGDRPPRQLNLGLPDL 156
Query 146 QSRLTQAVSVKLPNGSLFADRQALILSTMSRRGLQFDPQILDYLLLHGPHQASLLLKTIA 205
SRL KL S QAL L RG + + +LL + L T+
Sbjct 157 ASRLDWGQIYKLQPLSDDEKLQALQLRA-KLRGFELPEDVGRFLLKRLDREMRTLFMTLD 215
Query 206 QLEKLLKGEKTKLSNATLRQIYAL 229
QL++ + KL+ +++I +L
Sbjct 216 QLDRASITAQRKLTIPFVKEILSL 239
>B7LKE6 DnaA regulatory inactivator Hda [Escherichia fergusonii
(strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 /
JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)]
Length=233
Score = 73.6 bits (179), Expect = 7e-19
Identities = 62/202 (31%), Positives = 97/202 (48%), Gaps = 5/202 (2%)
Query 29 DAVRQLHAGLMNRFYIYGGAGSGKSHLLSAICDSYLEIGKSAIKVSLLELLDAPIEAITS 88
+ +RQ H+G + Y++ G+G+SHLL A C + G + V L + E +
Sbjct 36 NVLRQEHSGYI---YLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDG 92
Query 89 LERYDLVALDDIEAISGVPHWQKAVFHLINYNNEVG-GQLVFSSRVAPIELRLELPDLQS 147
+E+ LV +D+IE I+G W+ A+F L N E G +L+ + P +L L LPDL S
Sbjct 93 MEQLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLAS 152
Query 148 RLTQAVSVKLPNGSLFADRQALILSTMSRRGLQFDPQILDYLLLHGPHQASLLLKTIAQL 207
RL KL S QAL L RG + + +LL + L T+ QL
Sbjct 153 RLDWGQIYKLQPLSDEDKLQALQLRA-RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQL 211
Query 208 EKLLKGEKTKLSNATLRQIYAL 229
++ + KL+ +++I L
Sbjct 212 DRASITAQRKLTIPFVKEILKL 233
>B2TXS1 DnaA regulatory inactivator Hda [Shigella boydii serotype
18 (strain CDC 3083-94 / BS512)]
Length=233
Score = 73.2 bits (178), Expect = 1e-18
Identities = 62/202 (31%), Positives = 96/202 (48%), Gaps = 5/202 (2%)
Query 29 DAVRQLHAGLMNRFYIYGGAGSGKSHLLSAICDSYLEIGKSAIKVSLLELLDAPIEAITS 88
+ +RQ H+G + Y++ G+G+SHLL A C + G + V L + E +
Sbjct 36 NVLRQEHSGYI---YLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDG 92
Query 89 LERYDLVALDDIEAISGVPHWQKAVFHLINYNNEVG-GQLVFSSRVAPIELRLELPDLQS 147
+E LV +D+IE I+G W+ A+F L N E G +L+ + P +L L LPDL S
Sbjct 93 MEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLAS 152
Query 148 RLTQAVSVKLPNGSLFADRQALILSTMSRRGLQFDPQILDYLLLHGPHQASLLLKTIAQL 207
RL KL S QAL L RG + + +LL + L T+ QL
Sbjct 153 RLDWGQIYKLQPLSDEDKLQALQLRA-RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQL 211
Query 208 EKLLKGEKTKLSNATLRQIYAL 229
++ + KL+ +++I L
Sbjct 212 DRASITAQRKLTIPFVKEILKL 233
>Q1R8P2 DnaA regulatory inactivator Hda [Escherichia coli (strain
UTI89 / UPEC)]
Length=233
Score = 73.2 bits (178), Expect = 1e-18
Identities = 62/202 (31%), Positives = 96/202 (48%), Gaps = 5/202 (2%)
Query 29 DAVRQLHAGLMNRFYIYGGAGSGKSHLLSAICDSYLEIGKSAIKVSLLELLDAPIEAITS 88
+ +RQ H+G + Y++ G+G+SHLL A C + G + V L + E +
Sbjct 36 NVLRQEHSGYI---YLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDG 92
Query 89 LERYDLVALDDIEAISGVPHWQKAVFHLINYNNEVG-GQLVFSSRVAPIELRLELPDLQS 147
+E LV +D+IE I+G W+ A+F L N E G +L+ + P +L L LPDL S
Sbjct 93 MEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLAS 152
Query 148 RLTQAVSVKLPNGSLFADRQALILSTMSRRGLQFDPQILDYLLLHGPHQASLLLKTIAQL 207
RL KL S QAL L RG + + +LL + L T+ QL
Sbjct 153 RLDWGQIYKLQPLSDEDKLQALQLRA-RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQL 211
Query 208 EKLLKGEKTKLSNATLRQIYAL 229
++ + KL+ +++I L
Sbjct 212 DRASITAQRKLTIPFVKEILKL 233
>B1LNE6 DnaA regulatory inactivator Hda [Escherichia coli (strain
SMS-3-5 / SECEC)]
Length=233
Score = 73.2 bits (178), Expect = 1e-18
Identities = 62/202 (31%), Positives = 96/202 (48%), Gaps = 5/202 (2%)
Query 29 DAVRQLHAGLMNRFYIYGGAGSGKSHLLSAICDSYLEIGKSAIKVSLLELLDAPIEAITS 88
+ +RQ H+G + Y++ G+G+SHLL A C + G + V L + E +
Sbjct 36 NVLRQEHSGYI---YLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDG 92
Query 89 LERYDLVALDDIEAISGVPHWQKAVFHLINYNNEVG-GQLVFSSRVAPIELRLELPDLQS 147
+E LV +D+IE I+G W+ A+F L N E G +L+ + P +L L LPDL S
Sbjct 93 MEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLAS 152
Query 148 RLTQAVSVKLPNGSLFADRQALILSTMSRRGLQFDPQILDYLLLHGPHQASLLLKTIAQL 207
RL KL S QAL L RG + + +LL + L T+ QL
Sbjct 153 RLDWGQIYKLQPLSDEDKLQALQLRA-RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQL 211
Query 208 EKLLKGEKTKLSNATLRQIYAL 229
++ + KL+ +++I L
Sbjct 212 DRASITAQRKLTIPFVKEILKL 233
>B6I568 DnaA regulatory inactivator Hda [Escherichia coli (strain
SE11)]
Length=233
Score = 73.2 bits (178), Expect = 1e-18
Identities = 62/202 (31%), Positives = 96/202 (48%), Gaps = 5/202 (2%)
Query 29 DAVRQLHAGLMNRFYIYGGAGSGKSHLLSAICDSYLEIGKSAIKVSLLELLDAPIEAITS 88
+ +RQ H+G + Y++ G+G+SHLL A C + G + V L + E +
Sbjct 36 NVLRQEHSGYI---YLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDG 92
Query 89 LERYDLVALDDIEAISGVPHWQKAVFHLINYNNEVG-GQLVFSSRVAPIELRLELPDLQS 147
+E LV +D+IE I+G W+ A+F L N E G +L+ + P +L L LPDL S
Sbjct 93 MEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLAS 152
Query 148 RLTQAVSVKLPNGSLFADRQALILSTMSRRGLQFDPQILDYLLLHGPHQASLLLKTIAQL 207
RL KL S QAL L RG + + +LL + L T+ QL
Sbjct 153 RLDWGQIYKLQPLSDEDKLQALQLRA-RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQL 211
Query 208 EKLLKGEKTKLSNATLRQIYAL 229
++ + KL+ +++I L
Sbjct 212 DRASITAQRKLTIPFVKEILKL 233
>P69931 DnaA regulatory inactivator Hda [Escherichia coli (strain
K12)]
Length=233
Score = 73.2 bits (178), Expect = 1e-18
Identities = 62/202 (31%), Positives = 96/202 (48%), Gaps = 5/202 (2%)
Query 29 DAVRQLHAGLMNRFYIYGGAGSGKSHLLSAICDSYLEIGKSAIKVSLLELLDAPIEAITS 88
+ +RQ H+G + Y++ G+G+SHLL A C + G + V L + E +
Sbjct 36 NVLRQEHSGYI---YLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDG 92
Query 89 LERYDLVALDDIEAISGVPHWQKAVFHLINYNNEVG-GQLVFSSRVAPIELRLELPDLQS 147
+E LV +D+IE I+G W+ A+F L N E G +L+ + P +L L LPDL S
Sbjct 93 MEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLAS 152
Query 148 RLTQAVSVKLPNGSLFADRQALILSTMSRRGLQFDPQILDYLLLHGPHQASLLLKTIAQL 207
RL KL S QAL L RG + + +LL + L T+ QL
Sbjct 153 RLDWGQIYKLQPLSDEDKLQALQLRA-RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQL 211
Query 208 EKLLKGEKTKLSNATLRQIYAL 229
++ + KL+ +++I L
Sbjct 212 DRASITAQRKLTIPFVKEILKL 233
>A8AD95 DnaA regulatory inactivator Hda [Citrobacter koseri (strain
ATCC BAA-895 / CDC 4225-83 / SGSC4696)]
Length=241
Score = 72.0 bits (175), Expect = 3e-18
Identities = 61/202 (30%), Positives = 96/202 (48%), Gaps = 5/202 (2%)
Query 29 DAVRQLHAGLMNRFYIYGGAGSGKSHLLSAICDSYLEIGKSAIKVSLLELLDAPIEAITS 88
+ +RQ H+G + Y++ G+G+SHLL A C + G + V L + E +
Sbjct 44 NVLRQEHSGYI---YLWSREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDG 100
Query 89 LERYDLVALDDIEAISGVPHWQKAVFHLINYNNEVG-GQLVFSSRVAPIELRLELPDLQS 147
+E LV +D+IE ++G W+ A+F L N E G +L+ + P +L+L LPDL S
Sbjct 101 MEHLSLVCIDNIECVAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLKLGLPDLAS 160
Query 148 RLTQAVSVKLPNGSLFADRQALILSTMSRRGLQFDPQILDYLLLHGPHQASLLLKTIAQL 207
RL KL S QAL L RG + + +LL + L T+ QL
Sbjct 161 RLDWGQIYKLQPLSDEDKLQALQLRA-RLRGFELPEDVGRFLLKRLDREMRTLFITLDQL 219
Query 208 EKLLKGEKTKLSNATLRQIYAL 229
+ + KL+ +++I L
Sbjct 220 DHASITAQRKLTIPFVKEILTL 241
>B5R558 DnaA regulatory inactivator Hda [Salmonella enteritidis
PT4 (strain P125109)]
Length=241
Score = 71.6 bits (174), Expect = 4e-18
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 5/202 (2%)
Query 29 DAVRQLHAGLMNRFYIYGGAGSGKSHLLSAICDSYLEIGKSAIKVSLLELLDAPIEAITS 88
+ +RQ H+G + Y++ G+G+SHLL A C + G + V L + E +
Sbjct 44 NVLRQEHSGYI---YLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDG 100
Query 89 LERYDLVALDDIEAISGVPHWQKAVFHLINYNNEVG-GQLVFSSRVAPIELRLELPDLQS 147
+E LV +D+IE ++G W+ A+F L N E G +L+ + P +L L LPDL S
Sbjct 101 MEHLSLVCIDNIECVAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLAS 160
Query 148 RLTQAVSVKLPNGSLFADRQALILSTMSRRGLQFDPQILDYLLLHGPHQASLLLKTIAQL 207
RL KL S QAL L RG + + +LL + L T+ QL
Sbjct 161 RLDWGQIYKLQPLSDEDKLQALQLRA-RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQL 219
Query 208 EKLLKGEKTKLSNATLRQIYAL 229
+ + KL+ +++I L
Sbjct 220 DHASITAQRKLTIPFVKEILKL 241
>B5FQI8 DnaA regulatory inactivator Hda [Salmonella dublin (strain
CT_02021853)]
Length=241
Score = 71.6 bits (174), Expect = 4e-18
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 5/202 (2%)
Query 29 DAVRQLHAGLMNRFYIYGGAGSGKSHLLSAICDSYLEIGKSAIKVSLLELLDAPIEAITS 88
+ +RQ H+G + Y++ G+G+SHLL A C + G + V L + E +
Sbjct 44 NVLRQEHSGYI---YLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDG 100
Query 89 LERYDLVALDDIEAISGVPHWQKAVFHLINYNNEVG-GQLVFSSRVAPIELRLELPDLQS 147
+E LV +D+IE ++G W+ A+F L N E G +L+ + P +L L LPDL S
Sbjct 101 MEHLSLVCIDNIECVAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLAS 160
Query 148 RLTQAVSVKLPNGSLFADRQALILSTMSRRGLQFDPQILDYLLLHGPHQASLLLKTIAQL 207
RL KL S QAL L RG + + +LL + L T+ QL
Sbjct 161 RLDWGQIYKLQPLSDEDKLQALQLRA-RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQL 219
Query 208 EKLLKGEKTKLSNATLRQIYAL 229
+ + KL+ +++I L
Sbjct 220 DHASITAQRKLTIPFVKEILKL 241
>Q57LL3 DnaA regulatory inactivator Hda [Salmonella choleraesuis
(strain SC-B67)]
Length=241
Score = 71.6 bits (174), Expect = 4e-18
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 5/202 (2%)
Query 29 DAVRQLHAGLMNRFYIYGGAGSGKSHLLSAICDSYLEIGKSAIKVSLLELLDAPIEAITS 88
+ +RQ H+G + Y++ G+G+SHLL A C + G + V L + E +
Sbjct 44 NVLRQEHSGYI---YLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDG 100
Query 89 LERYDLVALDDIEAISGVPHWQKAVFHLINYNNEVG-GQLVFSSRVAPIELRLELPDLQS 147
+E LV +D+IE ++G W+ A+F L N E G +L+ + P +L L LPDL S
Sbjct 101 MEHLSLVCIDNIECVAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLAS 160
Query 148 RLTQAVSVKLPNGSLFADRQALILSTMSRRGLQFDPQILDYLLLHGPHQASLLLKTIAQL 207
RL KL S QAL L RG + + +LL + L T+ QL
Sbjct 161 RLDWGQIYKLQPLSDEDKLQALQLRA-RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQL 219
Query 208 EKLLKGEKTKLSNATLRQIYAL 229
+ + KL+ +++I L
Sbjct 220 DHASITAQRKLTIPFVKEILKL 241
>A9MHP3 DnaA regulatory inactivator Hda [Salmonella arizonae (strain
ATCC BAA-731 / CDC346-86 / RSK2980)]
Length=241
Score = 71.6 bits (174), Expect = 4e-18
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 5/202 (2%)
Query 29 DAVRQLHAGLMNRFYIYGGAGSGKSHLLSAICDSYLEIGKSAIKVSLLELLDAPIEAITS 88
+ +RQ H+G + Y++ G+G+SHLL A C + G + V L + E +
Sbjct 44 NVLRQEHSGYI---YLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDG 100
Query 89 LERYDLVALDDIEAISGVPHWQKAVFHLINYNNEVG-GQLVFSSRVAPIELRLELPDLQS 147
+E LV +D+IE ++G W+ A+F L N E G +L+ + P +L L LPDL S
Sbjct 101 MEHLSLVCIDNIECVAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLAS 160
Query 148 RLTQAVSVKLPNGSLFADRQALILSTMSRRGLQFDPQILDYLLLHGPHQASLLLKTIAQL 207
RL KL S QAL L RG + + +LL + L T+ QL
Sbjct 161 RLDWGQIYKLQPLSDEDKLQALQLRA-RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQL 219
Query 208 EKLLKGEKTKLSNATLRQIYAL 229
+ + KL+ +++I L
Sbjct 220 DHASITAQRKLTIPFVKEILKL 241
>B5F171 DnaA regulatory inactivator Hda [Salmonella agona (strain
SL483)]
Length=241
Score = 71.6 bits (174), Expect = 4e-18
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 5/202 (2%)
Query 29 DAVRQLHAGLMNRFYIYGGAGSGKSHLLSAICDSYLEIGKSAIKVSLLELLDAPIEAITS 88
+ +RQ H+G + Y++ G+G+SHLL A C + G + V L + E +
Sbjct 44 NVLRQEHSGYI---YLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDG 100
Query 89 LERYDLVALDDIEAISGVPHWQKAVFHLINYNNEVG-GQLVFSSRVAPIELRLELPDLQS 147
+E LV +D+IE ++G W+ A+F L N E G +L+ + P +L L LPDL S
Sbjct 101 MEHLSLVCIDNIECVAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLAS 160
Query 148 RLTQAVSVKLPNGSLFADRQALILSTMSRRGLQFDPQILDYLLLHGPHQASLLLKTIAQL 207
RL KL S QAL L RG + + +LL + L T+ QL
Sbjct 161 RLDWGQIYKLQPLSDEDKLQALQLRA-RLRGFELPEDVGRFLLKRLDREMRTLFMTLDQL 219
Query 208 EKLLKGEKTKLSNATLRQIYAL 229
+ + KL+ +++I L
Sbjct 220 DHASITAQRKLTIPFVKEILKL 241
>O87546 Chromosomal replication initiator protein DnaA [Treponema
denticola (strain ATCC 35405 / DSM 14222 / CIP 103919 /
JCM 8153 / KCTC 15104)]
Length=469
Score = 60.1 bits (144), Expect = 1e-13
Identities = 48/197 (24%), Positives = 86/197 (44%), Gaps = 11/197 (6%)
Query 40 NRFYIYGGAGSGKSHLLSAICDSYLEIGK-SAIKVSLLELLDAPIEAI---------TSL 89
N F IYGG G GK+HL+ AI + + K I V+ + +E + +
Sbjct 164 NPFLIYGGVGLGKTHLMQAIGNKIWDTTKLKVIYVTAENFTNEFVECVQKKMMPAFKSKY 223
Query 90 ERYDLVALDDIEAISGVPHWQKAVFHLINYNNEVGGQLVFSSRVAPIELRLELPDLQSRL 149
+ D++ +DDI G Q+ +FH N E Q+VF+ P EL+ L+SR
Sbjct 224 RKADVLLIDDIHFFQGKVETQEELFHTFNELYEKNKQIVFTCDRPPAELKNLSQRLKSRF 283
Query 150 TQAVSVKLPNGSLFADRQALILSTMSRRGLQFDPQILDYLLLHGPHQASLLLKTIAQLEK 209
+ ++V L + + R A++L M + + + +D + + L + +L
Sbjct 284 ERGLNVDLQTPA-YEIRYAILLKKMEKHSTKIPNEFIDMVAKNVSSNVRDLEAALTKLIA 342
Query 210 LLKGEKTKLSNATLRQI 226
+ K + AT + +
Sbjct 343 YTELTKKTMDEATAKNL 359
>Q51896 Chromosomal replication initiator protein DnaA [Prochlorococcus
marinus (strain SARG / CCMP1375 / SS120)]
Length=461
Score = 59.3 bits (142), Expect = 2e-13
Identities = 50/146 (34%), Positives = 70/146 (48%), Gaps = 22/146 (15%)
Query 40 NRFYIYGGAGSGKSHLLSAICDSYLEIGKSAIKVSLLELLDAPIEAITSL---------E 90
N +I GG G GK+HL+ AI LEI A KVS + + I ++ +
Sbjct 156 NPLFICGGVGLGKTHLMQAIGHYRLEIDPGA-KVSYVSTETFTNDLILAIRQDRMQAFRD 214
Query 91 RY---DLVALDDIEAISGVPHWQKAVFHLINYNNEVGGQLVFSSRVAPIELRLELPDLQS 147
RY DL+ +DDI+ I G + Q+ FH N ++ G Q+V +S P ++P LQ
Sbjct 215 RYRAADLILVDDIQFIEGKEYTQEEFFHTFNALHDAGSQIVLASDRPP----SQIPRLQE 270
Query 148 RLTQAVSVKLPNGSLFADRQALILST 173
RL S+ L AD QA L T
Sbjct 271 RLMSRFSM-----GLIADVQAPDLET 291
>Q9X9D5 Chromosomal replication initiator protein DnaA [Thermus
thermophilus (strain ATCC 27634 / DSM 579 / HB8)]
Length=436
Score = 57.0 bits (136), Expect = 1e-12
Identities = 50/171 (29%), Positives = 80/171 (47%), Gaps = 12/171 (7%)
Query 30 AVRQLHAGLMNRFYIYGGAGSGKSHLLSAICDS------YLEIGKSAIKVSLLELLDAPI 83
AV + N +IYGG G GK+HL+ A+ S +L I + + EL++A
Sbjct 126 AVAESPGRAYNPLFIYGGVGLGKTHLMHAVGHSVAKRFPHLRIEYVSTETFTNELINAIR 185
Query 84 E-AITSL-ERY---DLVALDDIEAISGVPHWQKAVFHLINYNNEVGGQLVFSSRVAPIEL 138
E +T ERY DL+ +DD++ I+G Q+ FH N E Q++ SS P ++
Sbjct 186 EDRMTEFRERYRSVDLLLVDDVQFIAGKERTQEEFFHTFNALYEAHKQIILSSDRPPKDI 245
Query 139 RLELPDLQSRLTQAVSVKLPNGSLFADRQALILSTMSRRGLQFDPQILDYL 189
L+SR + + L R A++ +RGL+ L+Y+
Sbjct 246 LTLEARLRSRFEWGLITDIQPPDL-ETRIAILKMNAEQRGLRIPEDALEYI 295
>P05648 Chromosomal replication initiator protein DnaA [Bacillus
subtilis (strain 168)]
Length=446
Score = 56.6 bits (135), Expect = 2e-12
Identities = 53/183 (29%), Positives = 80/183 (44%), Gaps = 15/183 (8%)
Query 20 SGPGWGHVVD-AVRQLHAGLMNRFYIYGGAGSGKSHLLSAICDSYLEIGKSAIKVSLLEL 78
SG + H AV + A N +IYGG G GK+HL+ AI ++ SA KV L
Sbjct 124 SGNRFAHAASLAVAEAPAKAYNPLFIYGGVGLGKTHLMHAIGHYVIDHNPSA-KVVYLSS 182
Query 79 LDAPIEAITSL---------ERY---DLVALDDIEAISGVPHWQKAVFHLINYNNEVGGQ 126
E I S+ RY D++ +DDI+ ++G Q+ FH N +E Q
Sbjct 183 EKFTNEFINSIRDNKAVDFRNRYRNVDVLLIDDIQFLAGKEQTQEEFFHTFNTLHEESKQ 242
Query 127 LVFSSRVAPIELRLELPDLQSRLTQAVSVKLPNGSLFADRQALILSTMSRRGLQFDPQIL 186
+V SS P E+ L+SR + + L R A++ GL +++
Sbjct 243 IVISSDRPPKEIPTLEDRLRSRFEWGLITDITPPDL-ETRIAILRKKAKAEGLDIPNEVM 301
Query 187 DYL 189
Y+
Sbjct 302 LYI 304
Score = 18.1 bits (35), Expect = 6.2
Identities = 20/88 (23%), Positives = 42/88 (48%), Gaps = 4/88 (5%)
Query 132 RVAPIELRLELPDLQSRLTQAVSVKLPNGSLFADRQALILSTMSRRGLQFDPQILDYL-L 190
RV + ++L D +++ + SV P + + S++ + G +F + D+ +
Sbjct 361 RVVGQQFNIKLEDFKAK-KRTKSVAFPRQIAMYLSREMTDSSLPKIGEEFGGR--DHTTV 417
Query 191 LHGPHQASLLLKTIAQLEKLLKGEKTKL 218
+H + S LL QL++ +K K +L
Sbjct 418 IHAHEKISKLLADDEQLQQHVKEIKEQL 445
>P49995 Chromosomal replication initiator protein DnaA [Synechocystis
sp. (strain PCC 6803 / Kazusa)]
Length=447
Score = 56.2 bits (134), Expect = 2e-12
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 20/168 (12%)
Query 40 NRFYIYGGAGSGKSHLLSAICDSYLEIGKSAIKVSLLELLDAPIEAITSLER-------- 91
N ++ GG G GK+HL+ AI LE+ +A KV + + IT++ +
Sbjct 141 NPLFLCGGVGLGKTHLMQAIAHYRLEMYPNA-KVYYVSTERFTNDLITAIRQDNMEDFRS 199
Query 92 ----YDLVALDDIEAISGVPHWQKAVFHLINYNNEVGGQLVFSSRVAPIELRLELPDLQS 147
D + +DDI+ I G + Q+ FH N +E G Q+V +S AP +P LQ
Sbjct 200 YYRSADFLLIDDIQFIKGKEYTQEEFFHTFNSLHEAGKQVVVASDRAP----QRIPGLQD 255
Query 148 RLTQAVSVKLPNGSLFAD---RQALILSTMSRRGLQFDPQILDYLLLH 192
RL S+ L D R A++ ++ ++++Y+ H
Sbjct 256 RLISRFSMGLIADIQVPDLETRMAILQKKAEYDRIRLPKEVIEYIASH 303
>O66659 Chromosomal replication initiator protein DnaA [Aquifex
aeolicus (strain VF5)]
Length=399
Score = 54.3 bits (129), Expect = 1e-11
Identities = 48/175 (27%), Positives = 78/175 (45%), Gaps = 16/175 (9%)
Query 27 VVDAVRQLHAGLMNRFYIYGGAGSGKSHLLSAICDSYLEIGKSAIKVSLLELLDAPIEAI 86
V +A+ L L N +IYG G+GK+HLL A + + G I S + A +E +
Sbjct 101 VKEALENL-GSLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSADDFAQAMVEHL 159
Query 87 ---------TSLERYDLVALDDIEAISGVPHWQKAVFHLINYNNEVGGQLVFSSRVAPIE 137
+ DL+ LDD++ +SG Q FH+ N + Q++ +S P +
Sbjct 160 KKGTINEFRNMYKSVDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQK 219
Query 138 LRLELPDLQSRLTQA--VSVKLPNGSLFADRQALILSTMSRRGLQFDPQILDYLL 190
L L SR V ++L N + F +I + L+ +++DYLL
Sbjct 220 LDGVSDRLVSRFEGGILVEIELDNKTRF----KIIKEKLKEFNLELRKEVIDYLL 270
>P68867 Chromosomal replication initiator protein DnaA [Staphylococcus
aureus]
Length=453
Score = 54.3 bits (129), Expect = 1e-11
Identities = 52/183 (28%), Positives = 82/183 (45%), Gaps = 15/183 (8%)
Query 21 GPG--WGHVVD-AVRQLHAGLMNRFYIYGGAGSGKSHLLSAICDSYLEIGKSA--IKVSL 75
GPG + H AV + A N +IYGG G GK+HL+ AI L+ A I S
Sbjct 128 GPGNRFPHAASLAVAEAPAKAYNPLFIYGGVGLGKTHLMHAIGHHVLDNNPDAKVIYTSS 187
Query 76 LELLDAPIEAITS------LERY---DLVALDDIEAISGVPHWQKAVFHLINYNNEVGGQ 126
+ + I++I ERY D++ +DDI+ I Q+ F+ N ++ Q
Sbjct 188 EKFTNEFIKSIRDNEGEAFRERYRNIDVLLIDDIQFIQNKVQTQEEFFYTFNELHQNNKQ 247
Query 127 LVFSSRVAPIELRLELPDLQSRLTQAVSVKLPNGSLFADRQALILSTMSRRGLQFDPQIL 186
+V SS P E+ L+SR + V + + R A++ + L P+ L
Sbjct 248 IVISSDRPPKEIAQLEDRLRSRFEWGLIVDITPPD-YETRMAILQKKIEEEKLDIPPEAL 306
Query 187 DYL 189
+Y+
Sbjct 307 NYI 309
>P33768 Chromosomal replication initiator protein DnaA [Borreliella
burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532
/ B31)]
Length=486
Score = 53.9 bits (128), Expect = 2e-11
Identities = 49/161 (30%), Positives = 77/161 (48%), Gaps = 16/161 (10%)
Query 40 NRFYIYGGAGSGKSHLLSAICDSYLEIGKSA--IKVSLLELLDAPIEAITSLE------- 90
N IYGG G GK+HLL +I + E+ + + V+ L+ +E+I + E
Sbjct 177 NPCLIYGGVGLGKTHLLQSIGNKTEELHHNLKILYVTAENFLNEFVESIKTHETKKFKKK 236
Query 91 -RY-DLVALDDIEAISGVPHWQKAVFHLINYNNEVGGQLVFSSRVAPIELRLELPDLQSR 148
RY D++ +DDI + Q+ +FH N E QLVF+ +P EL L+SR
Sbjct 237 YRYLDMLLIDDIHDLQKKEGIQEELFHTFNALYEDNKQLVFTCDRSPSELTNFTDRLKSR 296
Query 149 LTQAVSVKL--PNGSLFADRQALILSTMSRRGLQFDPQILD 187
T+ ++V + PN F R A++ G+ IL+
Sbjct 297 FTRGLNVDISKPN---FELRAAIVEKKAEEDGINVPKNILN 334
>P46798 Chromosomal replication initiator protein DnaA [Thermotoga
maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC
100826 / MSB8)]
Length=440
Score = 52.4 bits (124), Expect = 5e-11
Identities = 45/152 (30%), Positives = 72/152 (47%), Gaps = 16/152 (11%)
Query 21 GPGWGHVVDAVRQL--HAGLMNRFYIYGGAGSGKSHLLSAICDSYLEIGKSAIKVS---- 74
GPG A ++ H G N +IYGG G GK+HLL +I +Y+ + ++V
Sbjct 110 GPGNSFAYHAALEVAKHPGRYNPLFIYGGVGLGKTHLLQSI-GNYVVQNEPDLRVMYITS 168
Query 75 ---LLELLDAPIEAITS--LERY----DLVALDDIEAISGVPHWQKAVFHLINYNNEVGG 125
L +L+D+ E + E+Y D++ +DD++ + G Q +FH N ++ G
Sbjct 169 EKFLNDLVDSMKEGKLNEFREKYRKKVDILLIDDVQFLIGKTGVQTELFHTFNELHDSGK 228
Query 126 QLVFSSRVAPIELRLELPDLQSRLTQAVSVKL 157
Q+V S P +L L SR + KL
Sbjct 229 QIVICSDREPQKLSEFQDRLVSRFQMGLVAKL 260
Lambda K H a alpha
0.323 0.140 0.401 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1524492
Database: 68d702d0ba09541af1ae4a4b6233d1ab.SwissProt.fasta
Posted date: Jun 3, 2024 8:08 AM
Number of letters in database: 9,693
Number of sequences in database: 33
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
