BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 375dfe82e6bffb0c41871de0d95bf93a.SwissProt.fasta
1 sequences; 730 total letters
Query= ACIAD2651
Length=369
Score E
Sequences producing significant alignments: (Bits) Value
Q8T674 ABC transporter G family member 20 [Dictyostelium discoideum] 48.5 2e-10
>Q8T674 ABC transporter G family member 20 [Dictyostelium discoideum]
Length=730
Score = 48.5 bits (114), Expect = 2e-10
Identities = 82/383 (21%), Positives = 154/383 (40%), Gaps = 34/383 (9%)
Query 12 FKDIVKNSSILTTVVLSVFFYSFFYPTAYKAEHAESLPVVVVDEEQSPITSKIISKVSES 71
F I++N +L+ +LS Y A ++L VV+ + PI S I+ +S +
Sbjct 356 FIQIIRNKVVLSFELLSPSVQVLLYFLAIGGS-PKNLEFGVVNLDVGPIGSMYINSLSNT 414
Query 72 PNVKIVAITGNFLEAENMVRNQKADGILYLPDNLSNSIRRGEM--------GGIGLYIST 123
EA +++ + G+L + S +I M G I LY+
Sbjct 415 GIFNFHNYNST-TEAIEQIKSGNSFGLLDINAQFSEAILENFMNLSQYNPNGQIDLYMDF 473
Query 124 AYFLKTKEIGLGFATAIENIIQEHAQKFAEVTHFKPELSIHQIPLFNTLSGYGSYVFPAV 183
+ T + A + E + A++ A +T P ++ N S + ++ P +
Sbjct 474 TNYQITLIVEQQLALSFETL----AKQQANIT-MNPIKTVTPTVYGNPNSKFIDFLAPGM 528
Query 184 APLI-----IHQTIVLGLGMLIGGYREKNWW---STPSQFWGIFFSFFTIGCLGCFYLFG 235
LI I T V + + G ++ + T S +G F + + L
Sbjct 529 VCLISFAHAISITSVSFVKEKVDGSLDRLFAYGVRTSSIVFGHFLGHLPLLLVQITVLLL 588
Query 236 FIFWLNDYPHGGNFWGMLCAVPIFISCV-VALGLLFGSVLDMSERAGHFLVFTSIPLFLL 294
+ + P GN ++ + + ++ V ++LGL+ +V + A + P +
Sbjct 589 IAIYGFNVPIEGNI-ALVFLMTVSLAFVGMSLGLVISAVSRVETEAIQLSLGVYFPTLIC 647
Query 295 TGTAWPLQAMPDWMHLFSLALPSTHGVQLF---------IQLNQMGVPTLLVVPKLIILA 345
+GT WPLQ++P+W F LP+TH + ++ V L+V+ LI L
Sbjct 648 SGTLWPLQSLPNWFVWFPNILPATHAGNAMRDIMLKGVGLHYKEVWVAFLVVLSWLIFLI 707
Query 346 SMATIFLSLAYYRLVIASAKNQK 368
+A + L+ L ++ K +K
Sbjct 708 FIAVLALNEKDKNLKLSCFKKRK 730
Score = 16.2 bits (30), Expect = 3.2
Identities = 11/45 (24%), Positives = 21/45 (47%), Gaps = 4/45 (9%)
Query 162 SIHQIPLFNTLSGYGSYVFPAVAPLIIHQTIVLGLGMLIGGYREK 206
++HQIP S + P I +++ G+L GG +++
Sbjct 113 NVHQIPKDKFESKKNEIIKLLDLPQINSRSV----GLLSGGQKKR 153
Score = 15.0 bits (27), Expect = 7.4
Identities = 6/21 (29%), Positives = 11/21 (52%), Gaps = 0/21 (0%)
Query 205 EKNWWSTPSQFWGIFFSFFTI 225
E N + ++ GI F F+ +
Sbjct 324 ENNTNGSTNKESGILFRFYKV 344
Lambda K H a alpha
0.328 0.142 0.449 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 232130
Database: 375dfe82e6bffb0c41871de0d95bf93a.SwissProt.fasta
Posted date: May 11, 2024 11:40 PM
Number of letters in database: 730
Number of sequences in database: 1
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40