BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eab0155e28779628f9518c61bd6e142b.SwissProt.fasta
           23 sequences; 8,970 total letters



Query= ACIAD2666

Length=330
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q6D033 Elongation factor P--(R)-beta-lysine ligase [Pectobacteriu...  283     2e-97
C6DFN3 Elongation factor P--(R)-beta-lysine ligase [Pectobacteriu...  281     5e-97
C5BDL9 Elongation factor P--(R)-beta-lysine ligase [Edwardsiella ...  278     8e-96
Q9ZIY0 Elongation factor P--(R)-beta-lysine ligase [Avibacterium ...  271     4e-93
B5R019 Elongation factor P--(R)-beta-lysine ligase [Salmonella en...  271     4e-93
Q57GN3 Elongation factor P--(R)-beta-lysine ligase [Salmonella ch...  271     4e-93
B5F2M2 Elongation factor P--(R)-beta-lysine ligase [Salmonella ag...  271     4e-93
B4TSD9 Elongation factor P--(R)-beta-lysine ligase [Salmonella sc...  271     4e-93
Q9ZJ12 Elongation factor P--(R)-beta-lysine ligase [Salmonella ty...  271     4e-93
B5FRL4 Elongation factor P--(R)-beta-lysine ligase [Salmonella du...  271     6e-93
B4EWY8 Elongation factor P--(R)-beta-lysine ligase [Proteus mirab...  271     6e-93
A8AMP1 Elongation factor P--(R)-beta-lysine ligase [Citrobacter k...  271     9e-93
A6TH74 Elongation factor P--(R)-beta-lysine ligase [Klebsiella pn...  270     2e-92
P57824 Elongation factor P--(R)-beta-lysine ligase [Pasteurella m...  269     3e-92
P0A8N7 Elongation factor P--(R)-beta-lysine ligase [Escherichia c...  266     8e-91
P28354 Lysine--tRNA ligase [Salmonella typhimurium (strain LT2 / ...  127     4e-36
P41255 Lysine--tRNA ligase [Thermus thermophilus]                     126     9e-36
P0A8N3 Lysine--tRNA ligase [Escherichia coli (strain K12)]            126     1e-35
P41258 Lysine--tRNA ligase [Campylobacter jejuni subsp. jejuni se...  125     3e-35
P0A8N5 Lysine--tRNA ligase, heat inducible [Escherichia coli (str...  125     3e-35
Q43990 Lysine--tRNA ligase [Acinetobacter baylyi (strain ATCC 333...  119     2e-33
Q43776 Lysine--tRNA ligase [Solanum lycopersicum]                     119     7e-33
Q53638 Lysine--tRNA ligase [Staphylococcus aureus]                    117     2e-32


>Q6D033 Elongation factor P--(R)-beta-lysine ligase [Pectobacterium 
atrosepticum (strain SCRI 1043 / ATCC BAA-672)]
Length=325

 Score = 283 bits (723),  Expect = 2e-97
 Identities = 159/321 (50%), Positives = 213/321 (66%), Gaps = 13/321 (4%)

Query  10   YQPTCSIEALQARAKLYQTIRTFFAERGVLEVETPIISQAGVTDVHLASVKALRHIEGKE  69
            +QP+ S+  L  RA +   +R FF +RGVLEVETP +SQA VTDV L   +      G  
Sbjct  7    WQPSASVANLLKRASIVAAVRRFFTDRGVLEVETPAMSQATVTDVFLYPFQTRFVGPGAA  66

Query  70   --RTQYLQTSPEFAMKRLLASGSGPIYQLCKVFRDDEHGRKHNSEFTMLEWYRPEFDLKD  127
               T YL TSPE+ MKRLLA+GSGPI+QLC+ FR++E GR HN EFTMLEWYRP +D+  
Sbjct  67   DGMTLYLMTSPEYHMKRLLAAGSGPIFQLCRSFRNEESGRHHNPEFTMLEWYRPHYDMYR  126

Query  128  LMHETADLLETCLKQRFDEIRPMILSYKHAFQDRLEINPLQATLKQLKDTADRVGLNLDL  187
            LM+E  DLL+  L     E    +LSY+ AF   LEI+PL     QL++ A+++GL  D+
Sbjct  127  LMNEVDDLLQQVLDCESAE----MLSYQQAFLRHLEIDPLSVDKAQLREAAEKLGLG-DI  181

Query  188  G---NDRLAYIDLLFSHIVEPSLGFDTPVFLTDFPPEMASLAKVRIDEDGEEVAARFEVY  244
                +DR + + +LF+  VEP++G D P F+  FP   ASLA+  I  +   VA RFEVY
Sbjct  182  ACREDDRDSLVQMLFTFGVEPNIGRDKPAFVYHFPATQASLAE--ISSEDHRVAERFEVY  239

Query  245  IEGLELANAYDELLDANILRARFEADNLERKLQGLAEMPLDENLLAALPH-MPACAGIAL  303
             +G+ELAN + EL DA+  R RFE DN +R  +GL++ P+DENLLAAL + +P C+G+AL
Sbjct  240  FKGIELANGFRELTDADEQRQRFEQDNRKRAARGLSQQPIDENLLAALKNGLPECSGVAL  299

Query  304  GVDRLLMIATRQLKIEQVIAF  324
            GVDRL+M+A +  K+  VIAF
Sbjct  300  GVDRLIMLALKAEKLSDVIAF  320


>C6DFN3 Elongation factor P--(R)-beta-lysine ligase [Pectobacterium 
carotovorum subsp. carotovorum (strain PC1)]
Length=325

 Score = 281 bits (720),  Expect = 5e-97
 Identities = 159/321 (50%), Positives = 209/321 (65%), Gaps = 13/321 (4%)

Query  10   YQPTCSIEALQARAKLYQTIRTFFAERGVLEVETPIISQAGVTDVHLASVKALRHIEGKE  69
            +QP+ S+  L  RA +   IR FF +RGVLEVETP +SQA VTD+ L   +      G  
Sbjct  7    WQPSASVANLLKRASIIAAIRRFFTDRGVLEVETPAMSQATVTDIFLYPFQTRFVGPGAA  66

Query  70   --RTQYLQTSPEFAMKRLLASGSGPIYQLCKVFRDDEHGRKHNSEFTMLEWYRPEFDLKD  127
               T YL TSPE+ MKRLLA+GSGPI+QLC+ FR++E GR HN EFTMLEWYRP +D+  
Sbjct  67   DGMTMYLMTSPEYHMKRLLAAGSGPIFQLCRSFRNEESGRHHNPEFTMLEWYRPHYDMYR  126

Query  128  LMHETADLLETCLKQRFDEIRPMILSYKHAFQDRLEINPLQATLKQLKDTADRVGLNLDL  187
            LM+E  DLL+  L     E    +LSY+ AF   LE++PL     QL++ A+++GL  D+
Sbjct  127  LMNEVDDLLQQVLDCESAE----MLSYQQAFLRHLELDPLSVDKAQLREAAEKLGLG-DI  181

Query  188  G---NDRLAYIDLLFSHIVEPSLGFDTPVFLTDFPPEMASLAKVRIDEDGEEVAARFEVY  244
                +DR + + +LF+  VEP +G D P F+  FP   ASLA+  I  +   VA RFEVY
Sbjct  182  ACREDDRDSLVQMLFTFGVEPHIGRDKPAFVYHFPATQASLAE--ISSEDHRVAERFEVY  239

Query  245  IEGLELANAYDELLDANILRARFEADNLERKLQGLAEMPLDENLLAALPH-MPACAGIAL  303
             +G+ELAN + EL DA+  R RFE DN +R  + L + P+DENLLAAL H +P CAG+AL
Sbjct  240  FKGIELANGFRELTDADEQRQRFEQDNRKRAARDLPQQPIDENLLAALKHGLPECAGVAL  299

Query  304  GVDRLLMIATRQLKIEQVIAF  324
            GVDRL+M+A    K+  VIAF
Sbjct  300  GVDRLIMLALNAEKLSDVIAF  320


>C5BDL9 Elongation factor P--(R)-beta-lysine ligase [Edwardsiella 
ictaluri (strain 93-146)]
Length=325

 Score = 278 bits (712),  Expect = 8e-96
 Identities = 159/322 (49%), Positives = 209/322 (65%), Gaps = 15/322 (5%)

Query  10   YQPTCSIEALQARAKLYQTIRTFFAERGVLEVETPIISQAGVTDVHLASVKALRHIEGKE  69
            +QP+  +  L  RA +  TIR FF++RGVLEV+TP +SQA VTDVHL   +   H  G  
Sbjct  7    WQPSAPVANLLKRASILSTIRRFFSDRGVLEVDTPSMSQATVTDVHLVPFQT--HFVGPG  64

Query  70   RTQ----YLQTSPEFAMKRLLASGSGPIYQLCKVFRDDEHGRKHNSEFTMLEWYRPEFDL  125
              Q    YL TSPE+ MKRLLA+GSGPIYQLC+ FR++E GR HN EFTMLEWYRP +D+
Sbjct  65   VAQGMMLYLMTSPEYHMKRLLAAGSGPIYQLCRSFRNEESGRYHNPEFTMLEWYRPHYDM  124

Query  126  KDLMHETADLLETCLKQRFDEIRPMILSYKHAFQDRLEINPLQATLKQLKDTADRVGLN-  184
              LM+E  DLL+  L+    E     LSY+ AF   L+++PL A   QL++ A ++ L+ 
Sbjct  125  YRLMNEVDDLLQQVLECESAE----TLSYQQAFIRHLDVDPLSADKTQLREVAAKLDLSN  180

Query  185  -LDLGNDRLAYIDLLFSHIVEPSLGFDTPVFLTDFPPEMASLAKVRIDEDGEEVAARFEV  243
              D   DR   + LLF+  VEP +G + PVF+  FP   ASLA++  ++    VA RFEV
Sbjct  181  VADNEEDRDTLLQLLFAFGVEPHIGKERPVFVYHFPASQASLAQISTED--HRVAERFEV  238

Query  244  YIEGLELANAYDELLDANILRARFEADNLERKLQGLAEMPLDENLLAALPH-MPACAGIA  302
            Y  G+ELAN + EL DA   R RFE DN +R   GL + P+DE+LLAAL H MP  +G+A
Sbjct  239  YYRGVELANGFHELTDAAEQRQRFEQDNRKRAAAGLPQQPIDEHLLAALEHGMPDSSGVA  298

Query  303  LGVDRLLMIATRQLKIEQVIAF  324
            LGVDRL+M+A    ++ +VIAF
Sbjct  299  LGVDRLIMLALSAERLSEVIAF  320


>Q9ZIY0 Elongation factor P--(R)-beta-lysine ligase [Avibacterium 
paragallinarum]
Length=322

 Score = 271 bits (694),  Expect = 4e-93
 Identities = 157/320 (49%), Positives = 209/320 (65%), Gaps = 9/320 (3%)

Query  8    NHYQPTCSIEALQARAKLYQTIRTFFAERGVLEVETPIISQAGVTDVHLA--SVKALRHI  65
            + ++PT SI+ L +RAK+   IR FF+ERG+LEVETPI+S+ GVTDVHL+  S K +   
Sbjct  4    HQWKPTASIQTLLSRAKIIAEIRQFFSERGLLEVETPILSEFGVTDVHLSTFSTKLISPF  63

Query  66   EGKERTQYLQTSPEFAMKRLLASGSGPIYQLCKVFRDDEHGRKHNSEFTMLEWYRPEFDL  125
            + KE+T +L TSPE+ MKRLL++GSG I+QLCKVFR++E G+KH+ EFTMLEWYRP FD+
Sbjct  64   QKKEKTLWLSTSPEYPMKRLLSAGSGAIFQLCKVFRNEEAGKKHSPEFTMLEWYRPYFDM  123

Query  126  KDLMHETADLLETCLKQRFDEIRPMILSYKHAFQDRLEINPLQATLKQLKDTADRVGLNL  185
              L++E  DLL+  L     E     +SY+ AFQ+ + I+PL A+  +L + A    L  
Sbjct  124  YRLINEVDDLLQYILDCEPAE----SMSYQFAFQEYVGIDPLSASQDKLIEKAKEYCLEN  179

Query  186  DLGNDRLAYIDLLFSHIVEPSLGFDTPVFLTDFPPEMASLAKVRIDEDGEEVAARFEVYI  245
                DR   +  LF+  VE  +G D PV +  FP   A+LA  +I  +   VA RFE Y 
Sbjct  180  AEREDRDTLLQFLFNVAVESQIGKDKPVAIYHFPATQAALA--QISSEDHRVAERFEFYY  237

Query  246  EGLELANAYDELLDANILRARFEADNLERKLQGLAEMPLDENLLAAL-PHMPACAGIALG  304
            +GLELAN + EL DAN  R RFE DN +R+  GL    +DE  LAAL   +P C+G+ALG
Sbjct  238  KGLELANGFCELTDANEQRHRFEQDNKQRERLGLPIHQIDERFLAALKAGVPNCSGVALG  297

Query  305  VDRLLMIATRQLKIEQVIAF  324
            VDRL+MIA     I +VIAF
Sbjct  298  VDRLIMIALGLENINEVIAF  317


>B5R019 Elongation factor P--(R)-beta-lysine ligase [Salmonella 
enteritidis PT4 (strain P125109)]
Length=325

 Score = 271 bits (694),  Expect = 4e-93
 Identities = 156/322 (48%), Positives = 207/322 (64%), Gaps = 15/322 (5%)

Query  10   YQPTCSIEALQARAKLYQTIRTFFAERGVLEVETPIISQAGVTDVHLASVKALRHIEGKE  69
            +QP+ SI  L  RA +   IR FFA+RGVLEVETP +SQA VTD+HL   +      G  
Sbjct  7    WQPSASIPNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFET--RFVGPG  64

Query  70   RTQ----YLQTSPEFAMKRLLASGSGPIYQLCKVFRDDEHGRKHNSEFTMLEWYRPEFDL  125
             +Q    YL TSPE+ MKRLLA+G GP++QLC+ FR++E GR HN EFTMLEWYRP +D+
Sbjct  65   HSQGINLYLMTSPEYHMKRLLAAGCGPVFQLCRSFRNEEMGRHHNPEFTMLEWYRPHYDM  124

Query  126  KDLMHETADLLETCLKQRFDEIRPMILSYKHAFQDRLEINPLQATLKQLKDTADRVGLN-  184
              LM+E  DLL+  L  +  E     LSY+ AFQ  LEI+PL A   QL++ A ++ L+ 
Sbjct  125  YRLMNEVDDLLQQVLDCQPAE----SLSYQQAFQRHLEIDPLSADKTQLREAAAKLDLSN  180

Query  185  -LDLGNDRLAYIDLLFSHIVEPSLGFDTPVFLTDFPPEMASLAKVRIDEDGEEVAARFEV  243
              D   DR   + LLF+  VEP +G + P F+  FP   ASLA++  ++    VA RFEV
Sbjct  181  IADTEEDRDTLLQLLFTMGVEPHIGKEKPTFIYHFPASQASLAQISTED--HRVAERFEV  238

Query  244  YIEGLELANAYDELLDANILRARFEADNLERKLQGLAEMPLDENLLAAL-PHMPACAGIA  302
            Y +G+ELAN + EL DA   + RFE DN +R  +GL + P+D+NLL AL   +P C+G+A
Sbjct  239  YYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQQPIDQNLLDALAAGLPDCSGVA  298

Query  303  LGVDRLLMIATRQLKIEQVIAF  324
            LGVDRL+M+A     +  VIAF
Sbjct  299  LGVDRLVMLALGAESLADVIAF  320


>Q57GN3 Elongation factor P--(R)-beta-lysine ligase [Salmonella 
choleraesuis (strain SC-B67)]
Length=325

 Score = 271 bits (694),  Expect = 4e-93
 Identities = 156/322 (48%), Positives = 207/322 (64%), Gaps = 15/322 (5%)

Query  10   YQPTCSIEALQARAKLYQTIRTFFAERGVLEVETPIISQAGVTDVHLASVKAL----RHI  65
            +QP+ SI  L  RA +   IR FFA+RGVLEVETP +SQA VTD+HL   +       H 
Sbjct  7    WQPSASIPNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFETRFVGPGHS  66

Query  66   EGKERTQYLQTSPEFAMKRLLASGSGPIYQLCKVFRDDEHGRKHNSEFTMLEWYRPEFDL  125
            +G     YL TSPE+ MKRLLA+G GP++QLC+ FR++E GR HN EFTMLEWYRP +D+
Sbjct  67   QGMNL--YLMTSPEYHMKRLLAAGCGPVFQLCRSFRNEEMGRHHNPEFTMLEWYRPHYDM  124

Query  126  KDLMHETADLLETCLKQRFDEIRPMILSYKHAFQDRLEINPLQATLKQLKDTADRVGLN-  184
              LM+E  DLL+  L  +  E     LSY+ AFQ  LEI+PL A   QL++ A ++ L+ 
Sbjct  125  YRLMNEVDDLLQQVLDCQPAE----SLSYQQAFQRHLEIDPLSADKTQLREAAAKLDLSN  180

Query  185  -LDLGNDRLAYIDLLFSHIVEPSLGFDTPVFLTDFPPEMASLAKVRIDEDGEEVAARFEV  243
              D   DR   + LLF+  VEP +G + P F+  FP   ASLA++  ++    VA RFEV
Sbjct  181  IADTEEDRDTLLQLLFTMGVEPHIGKEKPTFIYHFPASQASLAQISTED--HRVAERFEV  238

Query  244  YIEGLELANAYDELLDANILRARFEADNLERKLQGLAEMPLDENLLAAL-PHMPACAGIA  302
            Y +G+ELAN + EL DA   + RFE DN +R  +GL + P+D+NLL AL   +P C+G+A
Sbjct  239  YYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQQPIDQNLLDALAAGLPDCSGVA  298

Query  303  LGVDRLLMIATRQLKIEQVIAF  324
            LGVDRL+M+A     +  VIAF
Sbjct  299  LGVDRLVMLALGAESLADVIAF  320


>B5F2M2 Elongation factor P--(R)-beta-lysine ligase [Salmonella 
agona (strain SL483)]
Length=325

 Score = 271 bits (694),  Expect = 4e-93
 Identities = 156/322 (48%), Positives = 207/322 (64%), Gaps = 15/322 (5%)

Query  10   YQPTCSIEALQARAKLYQTIRTFFAERGVLEVETPIISQAGVTDVHLASVKALRHIEGKE  69
            +QP+ SI  L  RA +   IR FFA+RGVLEVETP +SQA VTD+HL   +      G  
Sbjct  7    WQPSASIPNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFET--RFVGPG  64

Query  70   RTQ----YLQTSPEFAMKRLLASGSGPIYQLCKVFRDDEHGRKHNSEFTMLEWYRPEFDL  125
             +Q    YL TSPE+ MKRLLA+G GP++QLC+ FR++E GR HN EFTMLEWYRP +D+
Sbjct  65   HSQGINLYLMTSPEYHMKRLLAAGCGPVFQLCRSFRNEEMGRHHNPEFTMLEWYRPHYDM  124

Query  126  KDLMHETADLLETCLKQRFDEIRPMILSYKHAFQDRLEINPLQATLKQLKDTADRVGLN-  184
              LM+E  DLL+  L  +  E     LSY+ AFQ  LEI+PL A   QL++ A ++ L+ 
Sbjct  125  YRLMNEVDDLLQQVLDCQPAE----SLSYQQAFQRHLEIDPLSADKTQLREAAAKLDLSN  180

Query  185  -LDLGNDRLAYIDLLFSHIVEPSLGFDTPVFLTDFPPEMASLAKVRIDEDGEEVAARFEV  243
              D   DR   + LLF+  VEP +G + P F+  FP   ASLA++  ++    VA RFEV
Sbjct  181  IADTEEDRDTLLQLLFTMGVEPHIGKEKPTFIYHFPASQASLAQISTED--HRVAERFEV  238

Query  244  YIEGLELANAYDELLDANILRARFEADNLERKLQGLAEMPLDENLLAAL-PHMPACAGIA  302
            Y +G+ELAN + EL DA   + RFE DN +R  +GL + P+D+NLL AL   +P C+G+A
Sbjct  239  YYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQQPIDQNLLDALAAGLPDCSGVA  298

Query  303  LGVDRLLMIATRQLKIEQVIAF  324
            LGVDRL+M+A     +  VIAF
Sbjct  299  LGVDRLVMLALGAESLADVIAF  320


>B4TSD9 Elongation factor P--(R)-beta-lysine ligase [Salmonella 
schwarzengrund (strain CVM19633)]
Length=325

 Score = 271 bits (694),  Expect = 4e-93
 Identities = 156/322 (48%), Positives = 207/322 (64%), Gaps = 15/322 (5%)

Query  10   YQPTCSIEALQARAKLYQTIRTFFAERGVLEVETPIISQAGVTDVHLASVKAL----RHI  65
            +QP+ SI  L  RA +   IR FFA+RGVLEVETP +SQA VTD+HL   +       H 
Sbjct  7    WQPSASIPNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFETRFVGPGHS  66

Query  66   EGKERTQYLQTSPEFAMKRLLASGSGPIYQLCKVFRDDEHGRKHNSEFTMLEWYRPEFDL  125
            +G     YL TSPE+ MKRLLA+G GP++QLC+ FR++E GR HN EFTMLEWYRP +D+
Sbjct  67   QGMNL--YLMTSPEYHMKRLLAAGCGPVFQLCRSFRNEEMGRHHNPEFTMLEWYRPHYDM  124

Query  126  KDLMHETADLLETCLKQRFDEIRPMILSYKHAFQDRLEINPLQATLKQLKDTADRVGLN-  184
              LM+E  DLL+  L  +  E     LSY+ AFQ  LEI+PL A   QL++ A ++ L+ 
Sbjct  125  YRLMNEVDDLLQQVLDCQPAE----SLSYQQAFQRHLEIDPLSADKTQLREAAAKLDLSN  180

Query  185  -LDLGNDRLAYIDLLFSHIVEPSLGFDTPVFLTDFPPEMASLAKVRIDEDGEEVAARFEV  243
              D   DR   + LLF+  VEP +G + P F+  FP   ASLA++  ++    VA RFEV
Sbjct  181  IADTEEDRDTLLQLLFTMGVEPHIGKEKPTFIYHFPASQASLAQISTED--HRVAERFEV  238

Query  244  YIEGLELANAYDELLDANILRARFEADNLERKLQGLAEMPLDENLLAAL-PHMPACAGIA  302
            Y +G+ELAN + EL DA   + RFE DN +R  +GL + P+D+NLL AL   +P C+G+A
Sbjct  239  YYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQQPIDQNLLDALAAGLPDCSGVA  298

Query  303  LGVDRLLMIATRQLKIEQVIAF  324
            LGVDRL+M+A     +  VIAF
Sbjct  299  LGVDRLVMLALGAESLADVIAF  320


>Q9ZJ12 Elongation factor P--(R)-beta-lysine ligase [Salmonella 
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)]
Length=325

 Score = 271 bits (694),  Expect = 4e-93
 Identities = 156/322 (48%), Positives = 207/322 (64%), Gaps = 15/322 (5%)

Query  10   YQPTCSIEALQARAKLYQTIRTFFAERGVLEVETPIISQAGVTDVHLASVKALRHIEGKE  69
            +QP+ SI  L  RA +   IR FFA+RGVLEVETP +SQA VTD+HL   +      G  
Sbjct  7    WQPSASIPNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFET--RFVGPG  64

Query  70   RTQ----YLQTSPEFAMKRLLASGSGPIYQLCKVFRDDEHGRKHNSEFTMLEWYRPEFDL  125
             +Q    YL TSPE+ MKRLLA+G GP++QLC+ FR++E GR HN EFTMLEWYRP +D+
Sbjct  65   HSQGINLYLMTSPEYHMKRLLAAGCGPVFQLCRSFRNEEMGRHHNPEFTMLEWYRPHYDM  124

Query  126  KDLMHETADLLETCLKQRFDEIRPMILSYKHAFQDRLEINPLQATLKQLKDTADRVGLN-  184
              LM+E  DLL+  L  +  E     LSY+ AFQ  LEI+PL A   QL++ A ++ L+ 
Sbjct  125  YRLMNEVDDLLQQVLDCQPAE----SLSYQQAFQRHLEIDPLSADKTQLREAAAKLDLSN  180

Query  185  -LDLGNDRLAYIDLLFSHIVEPSLGFDTPVFLTDFPPEMASLAKVRIDEDGEEVAARFEV  243
              D   DR   + LLF+  VEP +G + P F+  FP   ASLA++  ++    VA RFEV
Sbjct  181  IADTEEDRDTLLQLLFTMGVEPHIGKEKPTFIYHFPASQASLAQISTED--HRVAERFEV  238

Query  244  YIEGLELANAYDELLDANILRARFEADNLERKLQGLAEMPLDENLLAAL-PHMPACAGIA  302
            Y +G+ELAN + EL DA   + RFE DN +R  +GL + P+D+NLL AL   +P C+G+A
Sbjct  239  YYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQQPIDQNLLDALAAGLPDCSGVA  298

Query  303  LGVDRLLMIATRQLKIEQVIAF  324
            LGVDRL+M+A     +  VIAF
Sbjct  299  LGVDRLVMLALGAESLADVIAF  320


>B5FRL4 Elongation factor P--(R)-beta-lysine ligase [Salmonella 
dublin (strain CT_02021853)]
Length=325

 Score = 271 bits (693),  Expect = 6e-93
 Identities = 155/322 (48%), Positives = 207/322 (64%), Gaps = 15/322 (5%)

Query  10   YQPTCSIEALQARAKLYQTIRTFFAERGVLEVETPIISQAGVTDVHLASVKALRHIEGKE  69
            +QP+ SI  L  RA +   IR FFA+RGVLEVETP +SQA VTD+HL   +      G  
Sbjct  7    WQPSASIPNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFET--RFVGPG  64

Query  70   RTQ----YLQTSPEFAMKRLLASGSGPIYQLCKVFRDDEHGRKHNSEFTMLEWYRPEFDL  125
             +Q    YL TSPE+ MKRLLA+G GP++QLC+ FR++E GR HN EFTMLEWYRP +D+
Sbjct  65   HSQGINLYLMTSPEYHMKRLLAAGCGPVFQLCRSFRNEEMGRHHNPEFTMLEWYRPHYDM  124

Query  126  KDLMHETADLLETCLKQRFDEIRPMILSYKHAFQDRLEINPLQATLKQLKDTADRVGLN-  184
              LM+E  DLL+  L  +  E     LSY+ AFQ  LEI+PL A   QL++ A ++ L+ 
Sbjct  125  YRLMNEVDDLLQQVLDCQPAE----SLSYQQAFQRHLEIDPLSADKTQLREAAAKLDLSN  180

Query  185  -LDLGNDRLAYIDLLFSHIVEPSLGFDTPVFLTDFPPEMASLAKVRIDEDGEEVAARFEV  243
              D   DR   + LLF+  VEP +G + P F+  FP   ASLA++  ++    VA RFEV
Sbjct  181  IADTEEDRDTLLQLLFTMGVEPHIGKEKPTFIYHFPASQASLAQISTED--HRVAERFEV  238

Query  244  YIEGLELANAYDELLDANILRARFEADNLERKLQGLAEMPLDENLLAAL-PHMPACAGIA  302
            Y +G+ELAN + EL DA   + RFE DN +R  +GL + P+D+NLL AL   +P C+G+A
Sbjct  239  YYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQQPIDQNLLDALAAGLPDCSGVA  298

Query  303  LGVDRLLMIATRQLKIEQVIAF  324
            LG+DRL+M+A     +  VIAF
Sbjct  299  LGIDRLVMLALGAESLADVIAF  320


>B4EWY8 Elongation factor P--(R)-beta-lysine ligase [Proteus mirabilis 
(strain HI4320)]
Length=325

 Score = 271 bits (693),  Expect = 6e-93
 Identities = 158/323 (49%), Positives = 205/323 (63%), Gaps = 15/323 (5%)

Query  10   YQPTCSIEALQARAKLYQTIRTFFAERGVLEVETPIISQAGVTDVHLASVKALRHIEGKE  69
            +QP+ SI  L  +AK+   IR FFA+RGVLEVETP++SQA VTD+HL   +      G  
Sbjct  7    WQPSASIANLLKKAKIVSNIRRFFADRGVLEVETPMMSQATVTDIHLCPFET--QFVGPG  64

Query  70   RTQ----YLQTSPEFAMKRLLASGSGPIYQLCKVFRDDEHGRKHNSEFTMLEWYRPEFDL  125
             +Q    YL TSPE+ MKRLLA+ SGPIYQ+ + FR++E GR HN EFTMLEWYRP FD+
Sbjct  65   ASQGLKLYLMTSPEYHMKRLLAANSGPIYQMGRCFRNEEAGRYHNPEFTMLEWYRPCFDM  124

Query  126  KDLMHETADLLETCLKQRFDEIRPMILSYKHAFQDRLEINPLQATLKQLKDTADRVGLN-  184
              LM+E  DLL+  L     E     LSY+ AF   L+I+PL A  ++L++ A ++ L+ 
Sbjct  125  YRLMNEVDDLLQEVLDCEASE----SLSYQQAFLRYLDIDPLSADKEKLREVAAKLDLSN  180

Query  185  -LDLGNDRLAYIDLLFSHIVEPSLGFDTPVFLTDFPPEMASLAKVRIDEDGEEVAARFEV  243
              D   +R   + LLF   VEP +G + P F+  FP   ASLA+  I  +   VA RFEV
Sbjct  181  IADTEENRDTLLQLLFVSGVEPHIGLEKPTFIYHFPASQASLAE--ISSEDHRVAERFEV  238

Query  244  YIEGLELANAYDELLDANILRARFEADNLERKLQGLAEMPLDENLLAAL-PHMPACAGIA  302
            Y +G+ELAN + EL DA   R RFE DN +R   GL E P+DE  LAAL   +P C+G+A
Sbjct  239  YFKGVELANGFRELTDAKEQRLRFERDNRQRVAMGLPEQPIDERFLAALEAGLPECSGVA  298

Query  303  LGVDRLLMIATRQLKIEQVIAFP  325
            LGVDRL+M+A    +I  VIAFP
Sbjct  299  LGVDRLIMLALGVERISDVIAFP  321


>A8AMP1 Elongation factor P--(R)-beta-lysine ligase [Citrobacter 
koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)]
Length=325

 Score = 271 bits (692),  Expect = 9e-93
 Identities = 155/322 (48%), Positives = 206/322 (64%), Gaps = 15/322 (5%)

Query  10   YQPTCSIEALQARAKLYQTIRTFFAERGVLEVETPIISQAGVTDVHLASVKAL----RHI  65
            +QP+ SI  L  RA +   IR FFA+RGVLEVETP +SQA VTD+HL   +       H 
Sbjct  7    WQPSASIPNLLKRAAIMTEIRRFFADRGVLEVETPCMSQATVTDIHLFPFETRFVGPGHS  66

Query  66   EGKERTQYLQTSPEFAMKRLLASGSGPIYQLCKVFRDDEHGRKHNSEFTMLEWYRPEFDL  125
            +G     YL TSPE+ MKRLL +G GP++QLC+ FR++E GR HN EFTMLEWYRP +D+
Sbjct  67   QGMNL--YLMTSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRHHNPEFTMLEWYRPHYDM  124

Query  126  KDLMHETADLLETCLKQRFDEIRPMILSYKHAFQDRLEINPLQATLKQLKDTADRVGLN-  184
              LM+E  DLL+  L+ +  E     LSY+  FQ  LEI+PL A   QL++ A ++ L+ 
Sbjct  125  YRLMNEVDDLLQQVLECQPAE----SLSYQQVFQRHLEIDPLSADKTQLREAAAKLDLSN  180

Query  185  -LDLGNDRLAYIDLLFSHIVEPSLGFDTPVFLTDFPPEMASLAKVRIDEDGEEVAARFEV  243
              D   DR   + LLF+  VEP +G + P F+  FP   ASLA++  ++    VA RFEV
Sbjct  181  IADTEEDRDTLLQLLFTMGVEPHIGKEKPTFVYHFPASQASLAQISTED--HRVAERFEV  238

Query  244  YIEGLELANAYDELLDANILRARFEADNLERKLQGLAEMPLDENLLAALP-HMPACAGIA  302
            Y +G+ELAN + EL DA   + RFE DN +R  +GL + P+D NLL AL   MP C+G+A
Sbjct  239  YFKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQQPIDNNLLEALKVGMPDCSGVA  298

Query  303  LGVDRLLMIATRQLKIEQVIAF  324
            LGVDRL+M+A     + +VIAF
Sbjct  299  LGVDRLVMLALGAESLAEVIAF  320


>A6TH74 Elongation factor P--(R)-beta-lysine ligase [Klebsiella 
pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)]
Length=325

 Score = 270 bits (689),  Expect = 2e-92
 Identities = 157/322 (49%), Positives = 207/322 (64%), Gaps = 15/322 (5%)

Query  10   YQPTCSIEALQARAKLYQTIRTFFAERGVLEVETPIISQAGVTDVHLASVKALRHIEGKE  69
            +QP+  I  L  RA +   IR FF +RGVLEVETP +SQA VTD+HL   +      G  
Sbjct  7    WQPSAPIPNLLKRAAVMAEIRRFFTDRGVLEVETPCMSQATVTDIHLFPFET--RFVGPG  64

Query  70   RTQ----YLQTSPEFAMKRLLASGSGPIYQLCKVFRDDEHGRKHNSEFTMLEWYRPEFDL  125
             +Q    YL TSPE+ MKRLLA+G GP++QLC+ FR++E GR HN EFTMLEWYRP +D+
Sbjct  65   HSQGLNLYLMTSPEYHMKRLLAAGCGPVFQLCRSFRNEEMGRHHNPEFTMLEWYRPCYDM  124

Query  126  KDLMHETADLLETCLKQRFDEIRPMILSYKHAFQDRLEINPLQATLKQLKDTADRVGLN-  184
              L++E  DLL+  L+ +  E     LSY+ AFQ  LEI+PL A   QL++ A ++ L+ 
Sbjct  125  YRLINEVDDLLQQVLECQPAE----SLSYQQAFQRHLEIDPLSADKAQLREVAAKLDLSN  180

Query  185  -LDLGNDRLAYIDLLFSHIVEPSLGFDTPVFLTDFPPEMASLAKVRIDEDGEEVAARFEV  243
              D   DR   + LLF+  VEP +G D P F+  FP   ASLA  +I  +   VA RFEV
Sbjct  181  IADTEEDRDTLLQLLFTMGVEPHIGKDRPTFIYHFPATQASLA--QISPEDHRVAERFEV  238

Query  244  YIEGLELANAYDELLDANILRARFEADNLERKLQGLAEMPLDENLLAAL-PHMPACAGIA  302
            Y +G+ELAN + EL DA+  R RFE DN +R  +GL + P+D NLLAAL   +P C+G+A
Sbjct  239  YYKGIELANGFHELTDAHEQRLRFEQDNRKRAARGLPQQPIDNNLLAALEAGLPDCSGVA  298

Query  303  LGVDRLLMIATRQLKIEQVIAF  324
            LGVDR++M+A     I +VIAF
Sbjct  299  LGVDRVVMLALGAESIGEVIAF  320


>P57824 Elongation factor P--(R)-beta-lysine ligase [Pasteurella 
multocida (strain Pm70)]
Length=323

 Score = 269 bits (688),  Expect = 3e-92
 Identities = 152/319 (48%), Positives = 206/319 (65%), Gaps = 9/319 (3%)

Query  9    HYQPTCSIEALQARAKLYQTIRTFFAERGVLEVETPIISQAGVTDVHLASVKA--LRHIE  66
            ++QP+ SIE L ARAK+   IR FF +RG+LEVETP++S+ GVTDVHL++     +    
Sbjct  6    NWQPSASIENLLARAKIIAEIRRFFTDRGLLEVETPVLSEFGVTDVHLSTFNTTFISPTA  65

Query  67   GKERTQYLQTSPEFAMKRLLASGSGPIYQLCKVFRDDEHGRKHNSEFTMLEWYRPEFDLK  126
             K +  +L TSPE+ MKRLLA+GSGPI+QLC VFR++E G++HN EFTMLEWYRP FD+ 
Sbjct  66   EKSKALWLSTSPEYHMKRLLAAGSGPIFQLCHVFRNEEAGQRHNPEFTMLEWYRPHFDMY  125

Query  127  DLMHETADLLETCLKQRFDEIRPMILSYKHAFQDRLEINPLQATLKQLKDTADRVGLNLD  186
             L++E  DLL+  L  +  E     LSY+  FQ+ + ++PL A   +L   A +  L   
Sbjct  126  RLINEVDDLLQQILDCKPTE----SLSYQFVFQEYVGLDPLSAEKAELVAKAKQYHLQQA  181

Query  187  LGNDRLAYIDLLFSHIVEPSLGFDTPVFLTDFPPEMASLAKVRIDEDGEEVAARFEVYIE  246
               DR   +  LFS +VEP++G + PV +  FP   A+LA  +I  +   VA RFE Y +
Sbjct  182  EQEDRDTLLQFLFSTVVEPNIGKENPVAVYHFPATQAALA--QISSEDHRVAERFEFYYK  239

Query  247  GLELANAYDELLDANILRARFEADNLERKLQGLAEMPLDENLLAAL-PHMPACAGIALGV  305
            GLELAN + EL D N    RFE DN++R+  GL +  +D+ LL AL   +P C+GIALGV
Sbjct  240  GLELANGFHELTDVNEQLHRFEQDNVQRQKMGLPQRQIDKRLLGALQAGVPNCSGIALGV  299

Query  306  DRLLMIATRQLKIEQVIAF  324
            DRLLMIA     I +V+AF
Sbjct  300  DRLLMIALGANAIHEVMAF  318


>P0A8N7 Elongation factor P--(R)-beta-lysine ligase [Escherichia 
coli (strain K12)]
Length=325

 Score = 266 bits (679),  Expect = 8e-91
 Identities = 153/322 (48%), Positives = 206/322 (64%), Gaps = 15/322 (5%)

Query  10   YQPTCSIEALQARAKLYQTIRTFFAERGVLEVETPIISQAGVTDVHLASVKAL----RHI  65
            +QP+ SI  L  RA +   IR FFA+RGVLEVETP +SQA VTD+HL   +       H 
Sbjct  7    WQPSASIPNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGPGHS  66

Query  66   EGKERTQYLQTSPEFAMKRLLASGSGPIYQLCKVFRDDEHGRKHNSEFTMLEWYRPEFDL  125
            +G     +L TSPE+ MKRLL +G GP++QLC+ FR++E GR HN EFTMLEWYRP +D+
Sbjct  67   QGMNL--WLMTSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNPEFTMLEWYRPHYDM  124

Query  126  KDLMHETADLLETCLKQRFDEIRPMILSYKHAFQDRLEINPLQATLKQLKDTADRVGLN-  184
              LM+E  DLL+    Q  D      LSY+ AF   LEI+PL A   QL++ A ++ L+ 
Sbjct  125  YRLMNEVDDLLQ----QVLDCPAAESLSYQQAFLRYLEIDPLSADKTQLREVAAKLDLSN  180

Query  185  -LDLGNDRLAYIDLLFSHIVEPSLGFDTPVFLTDFPPEMASLAKVRIDEDGEEVAARFEV  243
              D   DR   + LLF+  VEP++G + P F+  FP   ASLA++  ++    VA RFEV
Sbjct  181  VADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPASQASLAQISTED--HRVAERFEV  238

Query  244  YIEGLELANAYDELLDANILRARFEADNLERKLQGLAEMPLDENLLAALP-HMPACAGIA  302
            Y +G+ELAN + EL DA   + RFE DN +R  +GL + P+D+NL+ AL   MP C+G+A
Sbjct  239  YYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQHPIDQNLIEALKVGMPDCSGVA  298

Query  303  LGVDRLLMIATRQLKIEQVIAF  324
            LGVDRL+M+A     + +VIAF
Sbjct  299  LGVDRLVMLALGAETLAEVIAF  320


>P28354 Lysine--tRNA ligase [Salmonella typhimurium (strain LT2 
/ SGSC1412 / ATCC 700720)]
Length=505

 Score = 127 bits (319),  Expect = 4e-36
 Identities = 98/330 (30%), Positives = 161/330 (49%), Gaps = 27/330 (8%)

Query  15   SIEALQARAKLYQTIRTFFAERGVLEVETPIISQAGVTDVHLASVKALRHIEGKERTQYL  74
            S    + R+K+   IR F   RG +EVETP++    V     ++   + H    +   YL
Sbjct  180  SRNTFKTRSKILAGIRQFMVARGFMEVETPMMQ---VIPGGASARPFITHHNALDLDMYL  236

Query  75   QTSPEFAMKRLLASGSGPIYQLCKVFRDDEHGRKHNSEFTMLEWYRPEFDLKDLMHETAD  134
            + +PE  +KRL+  G   ++++ + FR++    +HN EFTM+E Y    D KDL+  T  
Sbjct  237  RIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTES  296

Query  135  LLETCLK------------QRFDEIRPM-ILSYKHA---FQDRLEINPLQATLKQLKDTA  178
            L  T  +            + FD  +P   L+ + A   ++   ++  L       K  A
Sbjct  297  LFRTLAQDVLGTTQVPYGDEVFDFGKPFEKLTMREAIKKYRPETDMADLD-NFDSAKAIA  355

Query  179  DRVGLNLDLGNDRLAYIDLLFSHIVEPSLGFDTPVFLTDFPPEMASLAKVRIDEDGEEVA  238
            + +G++++        +  +F  + E  L    P F+T++P E++ LA  R ++   E+ 
Sbjct  356  ESIGIHVEKSWGLGRIVTEIFDEVAEAHL--IQPTFITEYPAEVSPLA--RRNDVNPEIT  411

Query  239  ARFEVYIEGLELANAYDELLDANILRARFEADNLERKLQGLAE-MPLDENLLAALPH-MP  296
             RFE +I G E+ N + EL DA     RF  D +  K  G  E M  DE+ + AL H +P
Sbjct  412  DRFEFFIGGREIGNGFSELNDAEDQAQRF-LDQVNAKAAGDDEAMFYDEDYVTALEHGLP  470

Query  297  ACAGIALGVDRLLMIATRQLKIEQVIAFPA  326
              AG+ +G+DR++M+ T    I  VI FPA
Sbjct  471  PTAGLGIGIDRMVMLFTNSHTIRDVILFPA  500


>P41255 Lysine--tRNA ligase [Thermus thermophilus]
Length=492

 Score = 126 bits (316),  Expect = 9e-36
 Identities = 105/323 (33%), Positives = 157/323 (49%), Gaps = 22/323 (7%)

Query  17   EALQARAKLYQTIRTFFAERGVLEVETPIISQAGVTDVHLASVKALRHIEGKERTQYLQT  76
            E  + R+++ + IR FF  +G LEVETPI+ Q           K   +    E   YL+ 
Sbjct  165  EVFRRRSEIVRYIRRFFEAKGFLEVETPIL-QPTTGGAEARPFKTYHNALDHEF--YLRI  221

Query  77   SPEFAMKRLLASGSGPIYQLCKVFRDDEHGRKHNSEFTMLEWYRPEFDLKDLMHETADLL  136
            S E  +KRLL  G   ++++ + FR++     HN EFTMLE Y    D +D+     +LL
Sbjct  222  SLELYLKRLLVGGYEKVFEIGRNFRNEGIDHNHNPEFTMLEAYWAYADYQDMAGLVEELL  281

Query  137  ETCLKQRFDE----IRPMILSYKHAFQDRLEINPLQATLKQLKDTAD--RVGLNLDLGND  190
               +   F       +  +L++K  F+    +  L+       D  D  R+ L  D  + 
Sbjct  282  SGLVLHLFGSHEVPYQGRVLNFKPPFRRISFVEALKEKAGLPFDPLDLERLRLWADAHHP  341

Query  191  RLAYI------DLLFSHIVEPSLGFDTPVFLTDFPPEMASLAKVRIDEDGEEVAARFEVY  244
             L+ +      D LF   VEP L    P F+ DFP  ++ LAK   ++ G  +  R+++Y
Sbjct  342  ELSQVPNYKLLDKLFGIYVEPEL--QDPTFVFDFPLAISPLAKRHREKPG--LVERWDLY  397

Query  245  IEGLELANAYDELLDANILRARFEADNLERKLQGLAEMP-LDENLLAALPH-MPACAGIA  302
              G+ELA  Y EL D    R RF  +   R+ +G  E P  DE+ L AL + MP  AG+ 
Sbjct  398  AGGMELAPCYSELNDPLDQRERF-LEQARRRKEGDEEAPEPDEDFLLALEYGMPPAAGLG  456

Query  303  LGVDRLLMIATRQLKIEQVIAFP  325
            LG+DRL M+ T Q  +  V+ FP
Sbjct  457  LGIDRLAMLLTDQPSLRDVLLFP  479


>P0A8N3 Lysine--tRNA ligase [Escherichia coli (strain K12)]
Length=505

 Score = 126 bits (316),  Expect = 1e-35
 Identities = 95/329 (29%), Positives = 155/329 (47%), Gaps = 25/329 (8%)

Query  15   SIEALQARAKLYQTIRTFFAERGVLEVETPIISQAGVTDVHLASVKALRHIEGKERTQYL  74
            S    + R+++   IR F   RG +EVETP++    V     A+   + H    +   YL
Sbjct  180  SRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQ---VIPGGAAARPFITHHNALDLDMYL  236

Query  75   QTSPEFAMKRLLASGSGPIYQLCKVFRDDEHGRKHNSEFTMLEWYRPEFDLKDLMHETAD  134
            + +PE  +KRL+  G   ++++ + FR++    +HN EFTM+E Y    D KDL+  T  
Sbjct  237  RIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTES  296

Query  135  LLETCLKQRFDEIRPMILSYKHAFQDRLEINPLQATLKQ---------------LKDTAD  179
            L  T  +    +           F    E   ++  +K+                K  A+
Sbjct  297  LFRTLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAE  356

Query  180  RVGLNLDLGNDRLAYIDLLFSHIVEPSLGFDTPVFLTDFPPEMASLAKVRIDEDGEEVAA  239
             +G++++        +  +F  + E  L    P F+T++P E++ LA  R ++   E+  
Sbjct  357  SIGIHVEKSWGLGRIVTEIFEEVAEAHL--IQPTFITEYPAEVSPLA--RRNDVNPEITD  412

Query  240  RFEVYIEGLELANAYDELLDANILRARFEADNLERKLQGLAE-MPLDENLLAALPH-MPA  297
            RFE +I G E+ N + EL DA     RF  D +  K  G  E M  DE+ + AL H +P 
Sbjct  413  RFEFFIGGREIGNGFSELNDAEDQAQRF-LDQVAAKDAGDDEAMFYDEDYVTALEHGLPP  471

Query  298  CAGIALGVDRLLMIATRQLKIEQVIAFPA  326
             AG+ +G+DR++M+ T    I  VI FPA
Sbjct  472  TAGLGIGIDRMVMLFTNSHTIRDVILFPA  500


>P41258 Lysine--tRNA ligase [Campylobacter jejuni subsp. jejuni 
serotype O:2 (strain ATCC 700819 / NCTC 11168)]
Length=501

 Score = 125 bits (313),  Expect = 3e-35
 Identities = 105/325 (32%), Positives = 158/325 (49%), Gaps = 32/325 (10%)

Query  22   RAKLYQTIRTFFAERGVLEVETPIISQAGVTDVHLASVKALRHIEGKERTQYLQTSPEFA  81
            R+K+   IR FF  +G LEVETP++        +        +  G ER  +L+ +PE  
Sbjct  177  RSKVVSLIRHFFENKGFLEVETPMMHPIA-GGANAKPFVTFHNSLGVER--FLRIAPELY  233

Query  82   MKRLLASGSGPIYQLCKVFRDDEHGRKHNSEFTMLEWYRPEFDLKDLMHETADLLETCL-  140
            +KRL+  G   ++++ + FR++     HN EFT +E+Y    + KDLM  T +L    L 
Sbjct  234  LKRLIVGGFEAVFEINRCFRNEGMDLTHNPEFTTIEFYWAYHNYKDLMDLTEELFALLLD  293

Query  141  -----------------KQRFDEIRPMILSYKHAFQDRLEINPLQATLKQLKDTADRVGL  183
                              + F+ I       K+   DR  I   +  L +LK        
Sbjct  294  KLNLGKTIEFDGKMINFSKPFERITYKDALCKYGGLDRDLIEDKEKILTKLKADGFEANE  353

Query  184  NLDLGNDRLAYIDLLFSHIVEPSLGFDTPVFLTDFPPEMASLAKVRIDEDGEEVAARFEV  243
             L+LG+ +      LF + VE  L    P F+ DFP  ++ L++ R DED  ++A RFE+
Sbjct  354  KLELGHLQAE----LFDNYVEEKL--INPTFVIDFPISISPLSR-RSDED-SQIAERFEL  405

Query  244  YIEGLELANAYDELLDANILRARFEADNLERKLQGLAE-MPLDENLLAALPH-MPACAGI  301
            +I G ELAN ++EL D      RF    +E K  G  E   +DE+ + AL + MP  AG 
Sbjct  406  FICGRELANGFNELNDPLDQYERF-LKQIEAKNAGDEEACEMDEDFVNALGYGMPPTAGQ  464

Query  302  ALGVDRLLMIATRQLKIEQVIAFPA  326
             +G+DRL+M+ T +  I  VI FPA
Sbjct  465  GIGIDRLVMLLTNKKSIRDVILFPA  489


>P0A8N5 Lysine--tRNA ligase, heat inducible [Escherichia coli 
(strain K12)]
Length=505

 Score = 125 bits (313),  Expect = 3e-35
 Identities = 92/329 (28%), Positives = 156/329 (47%), Gaps = 25/329 (8%)

Query  15   SIEALQARAKLYQTIRTFFAERGVLEVETPIISQAGVTDVHLASVKALRHIEGKERTQYL  74
            S +    R+K+   IR F   RG +EVETP++    V     ++   + H    +   YL
Sbjct  180  SRQTFVVRSKILAAIRQFMVARGFMEVETPMMQ---VIPGGASARPFITHHNALDLDMYL  236

Query  75   QTSPEFAMKRLLASGSGPIYQLCKVFRDDEHGRKHNSEFTMLEWYRPEFDLKDLMHETAD  134
            + +PE  +KRL+  G   ++++ + FR++    +HN EFTM+E Y    D  DL+  T  
Sbjct  237  RIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTES  296

Query  135  LLETCLKQRFDEIRPMILSYKHAFQDRLEINPLQATLKQ---------------LKDTAD  179
            L  T  ++     +     +   F    E   ++  +K+                K  A+
Sbjct  297  LFRTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAE  356

Query  180  RVGLNLDLGNDRLAYIDLLFSHIVEPSLGFDTPVFLTDFPPEMASLAKVRIDEDGEEVAA  239
             +G+ ++        +  +F  + E  L    P F+T++P E++ LA  R ++   E+  
Sbjct  357  SIGITVEKSWGLGRIVTEIFDEVAEAHL--IQPTFITEYPAEVSPLA--RRNDVNPEITD  412

Query  240  RFEVYIEGLELANAYDELLDANILRARFEADNLERKLQGLAE-MPLDENLLAALPH-MPA  297
            RFE +I G E+ N + EL DA     RF+ + +  K  G  E M  DE+ + AL + +P 
Sbjct  413  RFEFFIGGREIGNGFSELNDAEDQAERFQ-EQVNAKAAGDDEAMFYDEDYVTALEYGLPP  471

Query  298  CAGIALGVDRLLMIATRQLKIEQVIAFPA  326
             AG+ +G+DR++M+ T    I  VI FPA
Sbjct  472  TAGLGIGIDRMIMLFTNSHTIRDVILFPA  500


>Q43990 Lysine--tRNA ligase [Acinetobacter baylyi (strain ATCC 
33305 / BD413 / ADP1)]
Length=509

 Score = 119 bits (299),  Expect = 2e-33
 Identities = 95/327 (29%), Positives = 153/327 (47%), Gaps = 26/327 (8%)

Query  17   EALQARAKLYQTIRTFFAERGVLEVETPIISQAGVTDVHLASVKALRHIEGKERTQYLQT  76
            +  + RA++   IR F   +  +EVETP++    V     ++   + H    +   YL+ 
Sbjct  184  KTFEIRAQVVAGIRAFLTNQRFMEVETPMMH---VIPGGASAQPFVTHHNALDMELYLRI  240

Query  77   SPEFAMKRLLASGSGPIYQLCKVFRDDEHGRKHNSEFTMLEWYRPEFDLKDLMHETADLL  136
            +PE  +KRL+  G   ++++ + FR++    +HN EFTM+E+Y+   D KDLM  T ++L
Sbjct  241  APELYLKRLVVGGFERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMQLTENML  300

Query  137  ETCLKQRF--------DEIRPMILSYKHA--FQDRLEINPLQATLKQLKDTADRVGLNLD  186
            E               DE+      +K    F   LE NP   T + + D         D
Sbjct  301  EKLALDILGTTDVPYGDEVYSFKGPFKKISMFDAILEHNP-DFTPENVNDREFLAKFTQD  359

Query  187  LGNDRLA-------YIDLLFSHIVEPSLGFDTPVFLTDFPPEMASLAKVRIDEDGEEVAA  239
            +  +++           ++F   VE  L    P F+T++P E + LA  R ++D   +  
Sbjct  360  VLKEQVKPGFGLGKLQTIVFEETVETKLR--QPTFITEYPAETSPLA--RRNDDNPHITD  415

Query  240  RFEVYIEGLELANAYDELLDANILRARFEADNLERKLQGLAEMPLDENLLAALPH-MPAC  298
            RFE +I G ELAN + EL D      RF+A   E+       M  D + + AL + +P  
Sbjct  416  RFEFFIGGRELANGFSELNDPIDQAERFQAQVAEKDAGDDEAMHYDADFIEALEYGLPPT  475

Query  299  AGIALGVDRLLMIATRQLKIEQVIAFP  325
            AG  +G+DRL+MI      I  V+ FP
Sbjct  476  AGQGIGIDRLVMIFANAPSIRDVLLFP  502


>Q43776 Lysine--tRNA ligase [Solanum lycopersicum]
Length=588

 Score = 119 bits (297),  Expect = 7e-33
 Identities = 92/333 (28%), Positives = 150/333 (45%), Gaps = 33/333 (10%)

Query  20   QARAKLYQTIRTFFAERGVLEVETPIISQAGVTDVHLASVKALRHIEGKERTQYLQTSPE  79
            + RA++   IR+F      LEVETP ++   +T    ++   + H    +    ++ SPE
Sbjct  259  RTRARIISYIRSFLDNLEFLEVETPSMN---LTAGGASARPFITHHNELDTELLIRVSPE  315

Query  80   FAMKRLLASGSGPIYQLCKVFRDDEHGRKHNSEFTMLEWYRPEFDLKDLMHETADLLETC  139
              +K+L+  G   +Y+L K FR++     H+ EFTM E Y    D  DLM  T  LL   
Sbjct  316  LYLKKLVVGGFDRVYELGKHFRNEGMDLTHSPEFTMCELYMAYADYNDLMDLTEQLLSGM  375

Query  140  LKQRFDEIR-----------PMILSYKHAFQDRLEINPLQATL--------------KQL  174
            +K      +           P+ + +   F+    ++ L+                 K L
Sbjct  376  VKDLTGSYKIRYHANGLDNEPIEIDFTPPFRKIDMLSELEKVANISIPRDLSSESANKHL  435

Query  175  KDTADRVGLNLDLGNDRLAYIDLLFSHIVEPSLGFDTPVFLTDFPPEMASLAKVRIDEDG  234
             D  ++  +     +     +D L  H +E  +    P F+ + P  M+ LAK R  E G
Sbjct  436  VDVCEKFDVKCPPPHTTTRLLDKLVGHFIE--VNCINPTFIINHPEIMSPLAKSRRSEPG  493

Query  235  EEVAARFEVYIEGLELANAYDELLDANILRARFEADNLERKLQGLAEMPLDENLLAALPH  294
              +  RF +++   EL +AY EL D    R RF     +R+L     M LDE+ + AL +
Sbjct  494  --LTERFNLFVNRRELCDAYTELNDPTAQRERFAEQLKDRQLGDDEAMDLDESFITALEY  551

Query  295  -MPACAGIALGVDRLLMIATRQLKIEQVIAFPA  326
             +P   G+ +G+DRL M+ T    +++VI FPA
Sbjct  552  GLPPTGGLGMGIDRLTMLLTDSQNVKEVILFPA  584


>Q53638 Lysine--tRNA ligase [Staphylococcus aureus]
Length=495

 Score = 117 bits (292),  Expect = 2e-32
 Identities = 104/325 (32%), Positives = 162/325 (50%), Gaps = 34/325 (10%)

Query  22   RAKLYQTIRTFFAERGVLEVETPIISQ-AGVTDVHLASVKALRHIEGKERTQYLQTSPEF  80
            R+K+ Q +R +   +G LEVETP++ Q AG      A+   + H    + T Y++ + E 
Sbjct  179  RSKIIQEMRNYLNNKGFLEVETPMMHQIAGGA----AARPFVTHHNALDATLYMRIAIEL  234

Query  81   AMKRLLASGSGPIYQLCKVFRDDEHGRKHNSEFTMLEWYRPEFDLKDLMHETADLLETCL  140
             +KRL+  G   +Y++ +VFR++    +HN EFTM+E Y    D  D+M    DL E+ +
Sbjct  235  HLKRLIVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIM----DLTESMV  290

Query  141  KQRFDEIRPMI-LSYKHAFQD------RLEINPL--QAT---LKQLKDTADRVGLNLDLG  188
            +   +E+     + Y     D      RL I     +AT     ++K   +R  L  + G
Sbjct  291  RHIANEVLGSAKVQYNGETIDLESAWTRLHIVDAVKEATGVDFYEVKSDEERKALAKEHG  350

Query  189  ---NDRLAYIDLL---FSHIVEPSLGFDTPVFLTDFPPEMASLAKVRIDEDGEEVAARFE  242
                D + Y  +L   F   VE +L    P F+   P E++ LAK   ++       RFE
Sbjct  351  IEIKDTMKYGHILNEFFEQKVEETL--IQPTFIYGHPTEISPLAKKNPEDP--RFTDRFE  406

Query  243  VYIEGLELANAYDELLDANILRARFEADNLERKLQGLAEM-PLDENLLAALPH-MPACAG  300
            ++I G E AN + EL D    + RFEA  +E K QG  E   +DE+ + AL + MP   G
Sbjct  407  LFIVGREHANRFTELNDPIDQKGRFEAQLVE-KAQGNDEAHEMDEDYIEALEYGMPPTGG  465

Query  301  IALGVDRLLMIATRQLKIEQVIAFP  325
            + +G+DRL+M+ T    I  V+ FP
Sbjct  466  LGIGIDRLVMLLTDSPSIRDVLLFP  490



Lambda      K        H        a         alpha
   0.323    0.139    0.402    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 2175363


  Database: eab0155e28779628f9518c61bd6e142b.SwissProt.fasta
    Posted date:  May 9, 2024  11:36 PM
  Number of letters in database: 8,970
  Number of sequences in database:  23



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40