BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: e6568dcbe8817459ff24da23271aaf40.TrEMBL.fasta
19 sequences; 3,204 total letters
Query= ACIAD2691
Length=170
Score E
Sequences producing significant alignments: (Bits) Value
Q6F920 Type VI secretion system contractile sheath small subunit ... 328 9e-121
A0A7G2SHG4 Type VI secretion system contractile sheath small subu... 325 9e-120
N9BLC7 Type VI secretion protein [Acinetobacter soli NIPH 2899] 308 7e-113
A0A1P8EEQ3 Type VI secretion system-associated protein [Acinetoba... 306 6e-112
A0A6C0YQA4 Type VI secretion protein [Acinetobacter indicus] 301 5e-110
N9MLN5 Type VI secretion protein [Acinetobacter sp. CIP 53.82] 300 8e-110
A0A4R0E2C7 Type VI secretion system contractile sheath small subu... 300 8e-110
A0A1Y3C1D0 Type VI secretion system-associated protein [Acinetoba... 300 1e-109
A0A3S9AUJ3 Type VI secretion system contractile sheath small subu... 300 1e-109
A0A3A8EHY4 Type VI secretion system contractile sheath small subu... 300 2e-109
A0A8B6X4E8 Type VI secretion system contractile sheath small subu... 134 6e-44
A0A8B6X313 Type VI secretion system contractile sheath small subu... 125 2e-40
Q9KN58 Type VI secretion system contractile sheath small subunit ... 85.1 6e-25
R9TLS2 TssB [Campylobacter jejuni] 80.1 4e-23
S0IC84 Type VI secretion system contractile sheath small subunit ... 79.7 7e-23
Q1D305 Type VI secretion system-associated protein [Myxococcus xa... 73.9 1e-20
A0Q7I5 Intracellular growth locus protein A [Francisella tularens... 71.2 2e-19
Q7X3J5 IglA [Francisella novicida] 68.9 1e-18
O52670 Type VI secretion protein [Escherichia coli] 65.1 3e-17
>Q6F920 Type VI secretion system contractile sheath small subunit
[Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)]
Length=169
Score = 328 bits (841), Expect = 9e-121
Identities = 168/169 (99%), Positives = 169/169 (100%), Gaps = 0/169 (0%)
Query 1 LTMAKRESVQKKLQRIRPPRVQLTYDVEIGDGKEAKELPFVVGVMGDFSAASELEKTKLK 60
+TMAKRESVQKKLQRIRPPRVQLTYDVEIGDGKEAKELPFVVGVMGDFSAASELEKTKLK
Sbjct 1 MTMAKRESVQKKLQRIRPPRVQLTYDVEIGDGKEAKELPFVVGVMGDFSAASELEKTKLK 60
Query 61 DKKFINVDLDNIDDVMQSMAPRAAFDVENTLTEEGGRMNVDLTFNSMQDFSPEQITQQVE 120
DKKFINVDLDNIDDVMQSMAPRAAFDVENTLTEEGGRMNVDLTFNSMQDFSPEQITQQVE
Sbjct 61 DKKFINVDLDNIDDVMQSMAPRAAFDVENTLTEEGGRMNVDLTFNSMQDFSPEQITQQVE 120
Query 121 PLRKLVEARERLTDLRNKISNNERLEDLLDEVLKNTDQVRKLSAEVDHE 169
PLRKLVEARERLTDLRNKISNNERLEDLLDEVLKNTDQVRKLSAEVDHE
Sbjct 121 PLRKLVEARERLTDLRNKISNNERLEDLLDEVLKNTDQVRKLSAEVDHE 169
>A0A7G2SHG4 Type VI secretion system contractile sheath small
subunit [Acinetobacter sp]
Length=167
Score = 325 bits (834), Expect = 9e-120
Identities = 167/167 (100%), Positives = 167/167 (100%), Gaps = 0/167 (0%)
Query 3 MAKRESVQKKLQRIRPPRVQLTYDVEIGDGKEAKELPFVVGVMGDFSAASELEKTKLKDK 62
MAKRESVQKKLQRIRPPRVQLTYDVEIGDGKEAKELPFVVGVMGDFSAASELEKTKLKDK
Sbjct 1 MAKRESVQKKLQRIRPPRVQLTYDVEIGDGKEAKELPFVVGVMGDFSAASELEKTKLKDK 60
Query 63 KFINVDLDNIDDVMQSMAPRAAFDVENTLTEEGGRMNVDLTFNSMQDFSPEQITQQVEPL 122
KFINVDLDNIDDVMQSMAPRAAFDVENTLTEEGGRMNVDLTFNSMQDFSPEQITQQVEPL
Sbjct 61 KFINVDLDNIDDVMQSMAPRAAFDVENTLTEEGGRMNVDLTFNSMQDFSPEQITQQVEPL 120
Query 123 RKLVEARERLTDLRNKISNNERLEDLLDEVLKNTDQVRKLSAEVDHE 169
RKLVEARERLTDLRNKISNNERLEDLLDEVLKNTDQVRKLSAEVDHE
Sbjct 121 RKLVEARERLTDLRNKISNNERLEDLLDEVLKNTDQVRKLSAEVDHE 167
>N9BLC7 Type VI secretion protein [Acinetobacter soli NIPH 2899]
Length=167
Score = 308 bits (789), Expect = 7e-113
Identities = 157/167 (94%), Positives = 161/167 (96%), Gaps = 0/167 (0%)
Query 3 MAKRESVQKKLQRIRPPRVQLTYDVEIGDGKEAKELPFVVGVMGDFSAASELEKTKLKDK 62
MAKRESVQKKLQRIRPPRVQLTYDVEIGDGKEAKELPFVVGVMGDFSAASE+EKTKLKDK
Sbjct 1 MAKRESVQKKLQRIRPPRVQLTYDVEIGDGKEAKELPFVVGVMGDFSAASEVEKTKLKDK 60
Query 63 KFINVDLDNIDDVMQSMAPRAAFDVENTLTEEGGRMNVDLTFNSMQDFSPEQITQQVEPL 122
KFINVDLDNIDDVMQSMAPRAAFDV NTLTE+GGRM+VDLTFNSM DF PE + QQVEPL
Sbjct 61 KFINVDLDNIDDVMQSMAPRAAFDVGNTLTEQGGRMHVDLTFNSMDDFRPEHVAQQVEPL 120
Query 123 RKLVEARERLTDLRNKISNNERLEDLLDEVLKNTDQVRKLSAEVDHE 169
RKLVEARERLTDLRNKISNNERLEDLLDEVLKNTDQVRKLS EVDHE
Sbjct 121 RKLVEARERLTDLRNKISNNERLEDLLDEVLKNTDQVRKLSNEVDHE 167
>A0A1P8EEQ3 Type VI secretion system-associated protein [Acinetobacter
soli]
Length=167
Score = 306 bits (783), Expect = 6e-112
Identities = 156/167 (93%), Positives = 160/167 (96%), Gaps = 0/167 (0%)
Query 3 MAKRESVQKKLQRIRPPRVQLTYDVEIGDGKEAKELPFVVGVMGDFSAASELEKTKLKDK 62
MAKRESVQKKLQRIRPPRVQLTYDVEIGDGKEAKELPFVVGVMGDFSAASE+EKTKLKDK
Sbjct 1 MAKRESVQKKLQRIRPPRVQLTYDVEIGDGKEAKELPFVVGVMGDFSAASEVEKTKLKDK 60
Query 63 KFINVDLDNIDDVMQSMAPRAAFDVENTLTEEGGRMNVDLTFNSMQDFSPEQITQQVEPL 122
KFINVDLDNIDDVMQSMAPRAAFDV N LTE+GGRM+VDLTFNSM DF PE + QQVEPL
Sbjct 61 KFINVDLDNIDDVMQSMAPRAAFDVGNILTEQGGRMHVDLTFNSMDDFRPEHVAQQVEPL 120
Query 123 RKLVEARERLTDLRNKISNNERLEDLLDEVLKNTDQVRKLSAEVDHE 169
RKLVEARERLTDLRNKISNNERLEDLLDEVLKNTDQVRKLS EVDHE
Sbjct 121 RKLVEARERLTDLRNKISNNERLEDLLDEVLKNTDQVRKLSNEVDHE 167
>A0A6C0YQA4 Type VI secretion protein [Acinetobacter indicus]
Length=167
Score = 301 bits (770), Expect = 5e-110
Identities = 149/167 (89%), Positives = 161/167 (96%), Gaps = 0/167 (0%)
Query 3 MAKRESVQKKLQRIRPPRVQLTYDVEIGDGKEAKELPFVVGVMGDFSAASELEKTKLKDK 62
MAKRESVQKKLQRIRPPRVQLTYDVE+GDGKE KELPFVVGV+GDFSAASELEKTKLKDK
Sbjct 1 MAKRESVQKKLQRIRPPRVQLTYDVEVGDGKEVKELPFVVGVLGDFSAASELEKTKLKDK 60
Query 63 KFINVDLDNIDDVMQSMAPRAAFDVENTLTEEGGRMNVDLTFNSMQDFSPEQITQQVEPL 122
KFINVDLDNID+VM+S+APRAAFDVENTLTEEGGRM+VDLTF SM+DF PE + QQV+PL
Sbjct 61 KFINVDLDNIDEVMESLAPRAAFDVENTLTEEGGRMSVDLTFTSMEDFRPESVVQQVDPL 120
Query 123 RKLVEARERLTDLRNKISNNERLEDLLDEVLKNTDQVRKLSAEVDHE 169
RKLVEARERLTDLRNKISN+ERLEDLLDEVLKNTDQ+RKLSAE DH+
Sbjct 121 RKLVEARERLTDLRNKISNSERLEDLLDEVLKNTDQIRKLSAEADHD 167
>N9MLN5 Type VI secretion protein [Acinetobacter sp. CIP 53.82]
Length=167
Score = 300 bits (769), Expect = 8e-110
Identities = 148/167 (89%), Positives = 161/167 (96%), Gaps = 0/167 (0%)
Query 3 MAKRESVQKKLQRIRPPRVQLTYDVEIGDGKEAKELPFVVGVMGDFSAASELEKTKLKDK 62
MAKRESVQKKLQRIRPPRVQLTYDVE+GDGKE KELPFVVG++GDFSAASELEKTKLKDK
Sbjct 1 MAKRESVQKKLQRIRPPRVQLTYDVEVGDGKEVKELPFVVGILGDFSAASELEKTKLKDK 60
Query 63 KFINVDLDNIDDVMQSMAPRAAFDVENTLTEEGGRMNVDLTFNSMQDFSPEQITQQVEPL 122
KFINVDLDNID+VM+S+APRAAFDVENTLTEEGGRM+VDLTF SM+DF PE + QQV+PL
Sbjct 61 KFINVDLDNIDEVMESLAPRAAFDVENTLTEEGGRMSVDLTFTSMEDFRPESVVQQVDPL 120
Query 123 RKLVEARERLTDLRNKISNNERLEDLLDEVLKNTDQVRKLSAEVDHE 169
RKLVEARERLTDLRNKISN+ERLEDLLDEVLKNTDQ+RKLSAE DH+
Sbjct 121 RKLVEARERLTDLRNKISNSERLEDLLDEVLKNTDQIRKLSAEADHD 167
>A0A4R0E2C7 Type VI secretion system contractile sheath small
subunit [Acinetobacter terrestris]
Length=167
Score = 300 bits (769), Expect = 8e-110
Identities = 149/167 (89%), Positives = 160/167 (96%), Gaps = 0/167 (0%)
Query 3 MAKRESVQKKLQRIRPPRVQLTYDVEIGDGKEAKELPFVVGVMGDFSAASELEKTKLKDK 62
MAKRESVQKKLQRIRPPRVQLTYDVE+GDGKE KELPFV+GV+GDFSAASELEKTKLKDK
Sbjct 1 MAKRESVQKKLQRIRPPRVQLTYDVEVGDGKEVKELPFVIGVLGDFSAASELEKTKLKDK 60
Query 63 KFINVDLDNIDDVMQSMAPRAAFDVENTLTEEGGRMNVDLTFNSMQDFSPEQITQQVEPL 122
KFINVDLDNID+VMQS+APRA F VENTLTEEGGRM+VDLTFNSMQDF PE + QQV+PL
Sbjct 61 KFINVDLDNIDEVMQSLAPRATFQVENTLTEEGGRMSVDLTFNSMQDFRPENVVQQVDPL 120
Query 123 RKLVEARERLTDLRNKISNNERLEDLLDEVLKNTDQVRKLSAEVDHE 169
RKLVEARERLTDLRNKISNNERLEDLLDEVL+NTDQVR+LSAE +HE
Sbjct 121 RKLVEARERLTDLRNKISNNERLEDLLDEVLQNTDQVRRLSAEAEHE 167
>A0A1Y3C1D0 Type VI secretion system-associated protein [Acinetobacter
sp. ANC 3903]
Length=167
Score = 300 bits (768), Expect = 1e-109
Identities = 149/167 (89%), Positives = 160/167 (96%), Gaps = 0/167 (0%)
Query 3 MAKRESVQKKLQRIRPPRVQLTYDVEIGDGKEAKELPFVVGVMGDFSAASELEKTKLKDK 62
MAKRESVQKKLQRIRPPRVQLTYDVE+GDGKE KELPFVVGV+GDFSAASEL+KTKLKDK
Sbjct 1 MAKRESVQKKLQRIRPPRVQLTYDVEVGDGKEIKELPFVVGVLGDFSAASELKKTKLKDK 60
Query 63 KFINVDLDNIDDVMQSMAPRAAFDVENTLTEEGGRMNVDLTFNSMQDFSPEQITQQVEPL 122
KFINVDLDNID+VMQS+APRAAF VENTLTEEGGRM+VDLTFN+MQDF PE + QQV+PL
Sbjct 61 KFINVDLDNIDEVMQSLAPRAAFQVENTLTEEGGRMSVDLTFNAMQDFRPENVVQQVDPL 120
Query 123 RKLVEARERLTDLRNKISNNERLEDLLDEVLKNTDQVRKLSAEVDHE 169
RKLVEARERLTDLRNKISNNERLEDLLDE+LKNTDQVRKLS E +HE
Sbjct 121 RKLVEARERLTDLRNKISNNERLEDLLDEILKNTDQVRKLSVEAEHE 167
>A0A3S9AUJ3 Type VI secretion system contractile sheath small
subunit [Acinetobacter haemolyticus]
Length=167
Score = 300 bits (768), Expect = 1e-109
Identities = 150/167 (90%), Positives = 163/167 (98%), Gaps = 0/167 (0%)
Query 3 MAKRESVQKKLQRIRPPRVQLTYDVEIGDGKEAKELPFVVGVMGDFSAASELEKTKLKDK 62
MAKRESVQKKLQRIRPPRVQLTYDVE+GDGKE+KELPFVVGVMGDFSAASELEKTKLKDK
Sbjct 1 MAKRESVQKKLQRIRPPRVQLTYDVEVGDGKESKELPFVVGVMGDFSAASELEKTKLKDK 60
Query 63 KFINVDLDNIDDVMQSMAPRAAFDVENTLTEEGGRMNVDLTFNSMQDFSPEQITQQVEPL 122
KFINVDLDNID+VM+S+APRAAF VENTLTEEGGRM+VDLTFNSM+DF PEQ+ QQV+PL
Sbjct 61 KFINVDLDNIDEVMESLAPRAAFQVENTLTEEGGRMSVDLTFNSMEDFRPEQVVQQVDPL 120
Query 123 RKLVEARERLTDLRNKISNNERLEDLLDEVLKNTDQVRKLSAEVDHE 169
RKLVEARERLTDLRNKISN+ERLEDLLDEVLKNTDQVR+LSAE ++E
Sbjct 121 RKLVEARERLTDLRNKISNSERLEDLLDEVLKNTDQVRQLSAEAENE 167
>A0A3A8EHY4 Type VI secretion system contractile sheath small
subunit [Acinetobacter guerrae]
Length=167
Score = 300 bits (767), Expect = 2e-109
Identities = 150/167 (90%), Positives = 161/167 (96%), Gaps = 0/167 (0%)
Query 3 MAKRESVQKKLQRIRPPRVQLTYDVEIGDGKEAKELPFVVGVMGDFSAASELEKTKLKDK 62
MAKRESVQKKLQRIRPPRVQLTYDVEIGD KEAKELPFVVGVMGDFSAASELEKTKLKDK
Sbjct 1 MAKRESVQKKLQRIRPPRVQLTYDVEIGDTKEAKELPFVVGVMGDFSAASELEKTKLKDK 60
Query 63 KFINVDLDNIDDVMQSMAPRAAFDVENTLTEEGGRMNVDLTFNSMQDFSPEQITQQVEPL 122
KFIN+DLDNID+VM+S+APRAAF VENTLTEEGGRM+VDLTFNSM+DF PEQ+ QQV+PL
Sbjct 61 KFINIDLDNIDEVMESLAPRAAFQVENTLTEEGGRMSVDLTFNSMEDFRPEQVVQQVDPL 120
Query 123 RKLVEARERLTDLRNKISNNERLEDLLDEVLKNTDQVRKLSAEVDHE 169
RKLVEARERLTDLRNKISN+ERLEDLLD+VLKNTDQVRKLS E +HE
Sbjct 121 RKLVEARERLTDLRNKISNSERLEDLLDDVLKNTDQVRKLSTEAEHE 167
>A0A8B6X4E8 Type VI secretion system contractile sheath small
subunit [Derxia gummosa DSM 723]
Length=169
Score = 134 bits (336), Expect = 6e-44
Identities = 67/159 (42%), Positives = 103/159 (65%), Gaps = 1/159 (1%)
Query 7 ESVQKKLQRIRPPRVQLTYDVEIGDGKEAKELPFVVGVMGDFSAASELEKTKLKDKKFIN 66
+S+QK + RPPRVQ+TYDVEIGD E KELP VVG++ D S KLK+++F++
Sbjct 3 DSLQKWVGNNRPPRVQITYDVEIGDAVEKKELPLVVGLLADLSGQPLNPLPKLKERRFVD 62
Query 67 VDLDNIDDVMQSMAPRAAFDVENTLTEEGGRMNVDLTFNSMQDFSPEQITQQVEPLRKLV 126
+D DN +++M +APR V +TL E G + V+L F F PE I +QV L +L+
Sbjct 63 IDRDNFNEIMTKIAPRLDLSVPDTLKGE-GNLKVELNFTEFDHFRPEAIVKQVPRLARLL 121
Query 127 EARERLTDLRNKISNNERLEDLLDEVLKNTDQVRKLSAE 165
EAR++L DL K+ N+ L+ LL+ ++ N+ +++ L ++
Sbjct 122 EARQQLRDLLAKLDGNDELDALLEAIVNNSAELQSLKSQ 160
>A0A8B6X313 Type VI secretion system contractile sheath small
subunit [Derxia gummosa DSM 723]
Length=168
Score = 125 bits (313), Expect = 2e-40
Identities = 66/157 (42%), Positives = 101/157 (64%), Gaps = 1/157 (1%)
Query 8 SVQKKLQRIRPPRVQLTYDVEIGDGKEAKELPFVVGVMGDFSAASELEKTKLKDKKFINV 67
S QK + R R PRVQ+ YDVE+ ++ +LPFV+GVM D S + D+KF+ +
Sbjct 5 SSQKFIARNRAPRVQIEYDVELYGAEKKVQLPFVMGVMSDLSGKPTEALPPVADRKFLEI 64
Query 68 DLDNIDDVMQSMAPRAAFDVENTLTEEGGRMNVDLTFNSMQDFSPEQITQQVEPLRKLVE 127
D+DN D ++++ PR AF V NTLT E G +NVD+TF SM DFSP + ++V+ L K++E
Sbjct 65 DVDNFDSRLKAIKPRVAFAVPNTLTGE-GNINVDITFESMDDFSPAAVARKVDALTKMLE 123
Query 128 ARERLTDLRNKISNNERLEDLLDEVLKNTDQVRKLSA 164
AR++L++L + E+LL +VL + ++ L+A
Sbjct 124 ARQQLSNLVTYMDGKTGAEELLAKVLADPALLQSLAA 160
>Q9KN58 Type VI secretion system contractile sheath small subunit
[Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor
Inaba N16961)]
Length=168
Score = 85.1 bits (209), Expect = 6e-25
Identities = 53/166 (32%), Positives = 86/166 (52%), Gaps = 9/166 (5%)
Query 3 MAKRESVQKKLQRIRPPRVQLTYDVEIGDGKEAKELPFVVGVMGDFSAASELEKTKLKDK 62
M+K SV K R+ + Y GD + ELP V+GDF +E +T L+++
Sbjct 1 MSKEGSVAPK------ERINIKYIPATGDAQAEVELPLKTLVVGDFKGHAE--QTPLEER 52
Query 63 KFINVDLDNIDDVMQSMAPRAAFDVENTLTE-EGGRMNVDLTFNSMQDFSPEQITQQVEP 121
+ VD +N + VM+ + V+N LT+ E + V+L F S+ DF+P+ + QV
Sbjct 53 ATVTVDKNNFEAVMRESELKITATVKNKLTDDENAELPVELNFKSLADFAPDAVASQVPE 112
Query 122 LRKLVEARERLTDLRNKISNNERLEDLLDEVLKNTDQVRKLSAEVD 167
L+KL+E RE L L+ + N + L +L + + KL AE++
Sbjct 113 LKKLIELREALVALKGPLGNIPAFRERLQSLLNSEESREKLLAELN 158
>R9TLS2 TssB [Campylobacter jejuni]
Length=161
Score = 80.1 bits (196), Expect = 4e-23
Identities = 46/150 (31%), Positives = 76/150 (51%), Gaps = 3/150 (2%)
Query 20 RVQLTYDVEIGDGKEAKELPFVVGVMGDFSAASELEKTKLKDKKFINVDLDNIDDVMQSM 79
R+ +TY + E ELP + VM + +E T L++++ + ++ N D VM+ +
Sbjct 11 RINITYKAKTNGQNEDVELPLKLMVMANLKGKNE---TPLEEREILQINKINFDQVMRKL 67
Query 80 APRAAFDVENTLTEEGGRMNVDLTFNSMQDFSPEQITQQVEPLRKLVEARERLTDLRNKI 139
+F V+NTL ++V L SM+DFSP+ + +Q+ L KL++ RE L L+ +
Sbjct 68 NITTSFSVKNTLGTGAEELDVKLNIASMKDFSPDSLAKQIPELNKLLQLREALMALKGPM 127
Query 140 SNNERLEDLLDEVLKNTDQVRKLSAEVDHE 169
N + E LKN KL E+ E
Sbjct 128 GNIPDFRKAVLEALKNEKTKEKLLLEIKQE 157
>S0IC84 Type VI secretion system contractile sheath small subunit
[Pseudomonas aeruginosa (strain PAK)]
Length=168
Score = 79.7 bits (195), Expect = 7e-23
Identities = 51/166 (31%), Positives = 84/166 (51%), Gaps = 10/166 (6%)
Query 3 MAKRESVQKKLQRIRPPRVQLTYDVEIGDGKEAKELPFVVGVMGDFSAASELEKTKLKDK 62
MAK SV K R+ +T+ G +E ELP + +GD++ ++ + K++D+
Sbjct 1 MAKEGSVAPK------ERINVTFKPATGGAQEEIELPLKLLAIGDYTQRTD--ERKVEDR 52
Query 63 KFINVDLDNIDDVMQSMAPRAAFDVENTLTEEGG--RMNVDLTFNSMQDFSPEQITQQVE 120
K I +D D+V+ V N L EEGG + V L NSM+DF+P I +QV
Sbjct 53 KPIGIDKMTFDEVLAKQELGLTLSVPNRLQEEGGSDELAVGLQINSMKDFNPASIVEQVP 112
Query 121 PLRKLVEARERLTDLRNKISNNERLEDLLDEVLKNTDQVRKLSAEV 166
L+KL+E R+ L L+ + N ++ VL + + ++ E+
Sbjct 113 ELKKLMELRDALVALKGPLGNAPAFRKAIESVLADDESRSRVLGEL 158
>Q1D305 Type VI secretion system-associated protein [Myxococcus
xanthus (strain DK1622)]
Length=164
Score = 73.9 bits (180), Expect = 1e-20
Identities = 46/148 (31%), Positives = 72/148 (49%), Gaps = 3/148 (2%)
Query 20 RVQLTYDVEIGDGKEAKELPFVVGVMGDFSAASELEKTKLKDKKFINVDLDNIDDVMQSM 79
RV + Y G+ +E ELP V ++GDF+ + L+ + INVD N ++VM
Sbjct 12 RVNIVYKPATGNAQEQVELPLKVLMLGDFTGQEDARP--LEQRAPINVDKANFNEVMAQQ 69
Query 80 APRAAFDVENTLTEE-GGRMNVDLTFNSMQDFSPEQITQQVEPLRKLVEARERLTDLRNK 138
+ + L+ + MNV L F ++ DFSPE + QV L+KL+E R L L+
Sbjct 70 NLKVTLTAADKLSADPNATMNVSLQFKNLNDFSPESVVNQVPELKKLLELRSALNALKGP 129
Query 139 ISNNERLEDLLDEVLKNTDQVRKLSAEV 166
+ N L +L + D + L E+
Sbjct 130 LGNLPAFRKKLQALLADEDGRKALIKEL 157
>A0Q7I5 Intracellular growth locus protein A [Francisella tularensis
subsp. novicida (strain U112)]
Length=184
Score = 71.2 bits (173), Expect = 2e-19
Identities = 37/153 (24%), Positives = 82/153 (54%), Gaps = 2/153 (1%)
Query 15 RIRPPRVQLTYDVEIGDGKEAKELPFVVGVMGDFSAASELE-KTKLKDKKFINVDLDNID 73
+I R+ + Y+ + + KELP+ V V+GD S ++ K + D++ V+ + +D
Sbjct 5 KIPNSRLMINYETNVDGVLKKKELPYRVLVVGDLSKGRSVDAKKEFADREVRRVN-NGVD 63
Query 74 DVMQSMAPRAAFDVENTLTEEGGRMNVDLTFNSMQDFSPEQITQQVEPLRKLVEARERLT 133
V++ M F+ N ++++ + V+ S++DF P+ + ++V +R L+E +E L
Sbjct 64 RVLEEMNISFDFEAPNFVSKDPSNLKVNYRIESVKDFRPDAVAKKVPEIRALLEMKEILA 123
Query 134 DLRNKISNNERLEDLLDEVLKNTDQVRKLSAEV 166
I NN L+ +D + +++++ L +++
Sbjct 124 SFAKDIENNRNLKKTIDMIFSDSNELESLKSKI 156
>Q7X3J5 IglA [Francisella novicida]
Length=184
Score = 68.9 bits (167), Expect = 1e-18
Identities = 36/153 (24%), Positives = 81/153 (53%), Gaps = 2/153 (1%)
Query 15 RIRPPRVQLTYDVEIGDGKEAKELPFVVGVMGDFSAASELE-KTKLKDKKFINVDLDNID 73
+I R+ + Y+ + + KELP+ V V+GD S ++ K + D++ V+ + +D
Sbjct 5 KIPNSRLMINYETNVDGVLKKKELPYRVLVVGDLSKGRSVDAKKEFADREVRRVN-NGVD 63
Query 74 DVMQSMAPRAAFDVENTLTEEGGRMNVDLTFNSMQDFSPEQITQQVEPLRKLVEARERLT 133
V++ M F+ N ++++ + V+ S++DF P+ + ++V +R L+ +E L
Sbjct 64 RVLEEMNISFDFEAPNFVSKDPSNLKVNYRIESVKDFRPDAVAKKVPEIRALLXMKEILA 123
Query 134 DLRNKISNNERLEDLLDEVLKNTDQVRKLSAEV 166
I NN L+ +D + +++++ L +++
Sbjct 124 SFAKDIENNRNLKKTIDMIFSDSNELESLKSKI 156
>O52670 Type VI secretion protein [Escherichia coli]
Length=166
Score = 65.1 bits (157), Expect = 3e-17
Identities = 47/150 (31%), Positives = 77/150 (51%), Gaps = 6/150 (4%)
Query 20 RVQLTYDVEIGDGKEAK-ELPFVVGVMGDFSAASELEKTKLKDKKFINVDLDNIDDVMQS 78
R+ ++Y V DG+ A+ ELP + V+GD + E + L +++ ++V+ N VM
Sbjct 14 RINISY-VPKTDGQTAEVELPLNMLVVGD--TGNTQETSSLDERQAVSVNKHNFGAVMAE 70
Query 79 MAPRAAFDVENTL--TEEGGRMNVDLTFNSMQDFSPEQITQQVEPLRKLVEARERLTDLR 136
A F V TL + +NV L S+ DFSP+ + +QV + KL+E RE LT L+
Sbjct 71 AAIGLNFTVPATLKGSTTDDELNVALNIKSLDDFSPDSVARQVPEVNKLLELREALTALK 130
Query 137 NKISNNERLEDLLDEVLKNTDQVRKLSAEV 166
+ N L +L+N + +L E+
Sbjct 131 GPMGNLPAFRTQLQALLENEESREQLLKEI 160
Lambda K H a alpha
0.317 0.134 0.359 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 332633
Database: e6568dcbe8817459ff24da23271aaf40.TrEMBL.fasta
Posted date: May 10, 2024 8:15 PM
Number of letters in database: 3,204
Number of sequences in database: 19
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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