Comparative Genomics

ACIAD2810 / TrEMBL Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: dad6ec857b1cbf55d456b9f1dee37cd1.TrEMBL.fasta
           12 sequences; 1,148 total letters



Query= ACIAD2810

Length=99
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q6F8R7 Uncharacterized protein [Acinetobacter baylyi (strain ATCC...  210     1e-76
A0A7G2SJ10 Uncharacterized protein [Acinetobacter sp]                 210     1e-76
A0A0M3A278 Uncharacterized protein [Acinetobacter sp. AG1]            111     2e-37
A0A1Q3M8R7 Uncharacterized protein [Acinetobacter sp. 39-4]           110     2e-37
A0A833UPA8 LITAF domain-containing protein [Acinetobacter berezin...  101     1e-33
A0A1Q3NL53 Uncharacterized protein [Acinetobacter sp. 38-8]           100     2e-33
N8TWQ7 Glycine zipper domain-containing protein [Acinetobacter sp...  97.1    6e-32
A0A7D4X6D3 Glycine zipper domain-containing protein [Acinetobacte...  93.6    1e-30
A0A1E3GM86 Glycine zipper domain-containing protein [Acinetobacte...  93.6    1e-30
D0SUB5 Glycine zipper domain-containing protein [Acinetobacter lw...  93.2    2e-30
A0A6N1MXX1 Glycine zipper domain-containing protein [Acinetobacte...  93.2    2e-30
A0A3B7LST3 Uncharacterized protein [Acinetobacter chinensis]          40.8    7e-10


>Q6F8R7 Uncharacterized protein [Acinetobacter baylyi (strain 
ATCC 33305 / BD413 / ADP1)]
Length=98

 Score = 210 bits (534),  Expect = 1e-76
 Identities = 98/98 (100%), Positives = 98/98 (100%), Gaps = 0/98 (0%)

Query  1   MQINYPYCHSEHVHRIIHNSSSSHQDTMNSLGSSATFASIGASLTKHLPTHLPLSPWMGG  60
           MQINYPYCHSEHVHRIIHNSSSSHQDTMNSLGSSATFASIGASLTKHLPTHLPLSPWMGG
Sbjct  1   MQINYPYCHSEHVHRIIHNSSSSHQDTMNSLGSSATFASIGASLTKHLPTHLPLSPWMGG  60

Query  61  IASALIGRLFNSVFNDPSPRPSITMSYFYCESCHQNFQ  98
           IASALIGRLFNSVFNDPSPRPSITMSYFYCESCHQNFQ
Sbjct  61  IASALIGRLFNSVFNDPSPRPSITMSYFYCESCHQNFQ  98


>A0A7G2SJ10 Uncharacterized protein [Acinetobacter sp]
Length=98

 Score = 210 bits (534),  Expect = 1e-76
 Identities = 98/98 (100%), Positives = 98/98 (100%), Gaps = 0/98 (0%)

Query  1   MQINYPYCHSEHVHRIIHNSSSSHQDTMNSLGSSATFASIGASLTKHLPTHLPLSPWMGG  60
           MQINYPYCHSEHVHRIIHNSSSSHQDTMNSLGSSATFASIGASLTKHLPTHLPLSPWMGG
Sbjct  1   MQINYPYCHSEHVHRIIHNSSSSHQDTMNSLGSSATFASIGASLTKHLPTHLPLSPWMGG  60

Query  61  IASALIGRLFNSVFNDPSPRPSITMSYFYCESCHQNFQ  98
           IASALIGRLFNSVFNDPSPRPSITMSYFYCESCHQNFQ
Sbjct  61  IASALIGRLFNSVFNDPSPRPSITMSYFYCESCHQNFQ  98


>A0A0M3A278 Uncharacterized protein [Acinetobacter sp. AG1]
Length=99

 Score = 111 bits (277),  Expect = 2e-37
 Identities = 52/98 (53%), Positives = 70/98 (71%), Gaps = 1/98 (1%)

Query  1   MQINYPYCHSEHVHRIIHNSSSSHQDTMNSLGSSATFASIGASLTKHLPTHLPLSPWMGG  60
           MQI  PYCHSEHV R++HN + +  D+ + LG+SATFASIGA L+K L   +P+SPW+GG
Sbjct  1   MQIICPYCHSEHVQRMLHNPAQASDDSSHLLGTSATFASIGAGLSKSLGGQIPISPWIGG  60

Query  61  IASALIGRLFNSVFNDPSPR-PSITMSYFYCESCHQNF  97
           IA A+IG LF+ + + P    P + +SYF C+SC Q F
Sbjct  61  IAGAVIGGLFSGLLDTPQRAVPQLPISYFQCQSCRQLF  98


>A0A1Q3M8R7 Uncharacterized protein [Acinetobacter sp. 39-4]
Length=99

 Score = 110 bits (276),  Expect = 2e-37
 Identities = 51/98 (52%), Positives = 71/98 (72%), Gaps = 1/98 (1%)

Query  1   MQINYPYCHSEHVHRIIHNSSSSHQDTMNSLGSSATFASIGASLTKHLPTHLPLSPWMGG  60
           MQI  PYCHSEHV R++H+ + +  D+ + LG+SATFASIGA L+K L   +P+SPW+GG
Sbjct  1   MQILCPYCHSEHVQRMLHSPAQASDDSSHLLGTSATFASIGAGLSKSLGGQIPISPWIGG  60

Query  61  IASALIGRLFNSVFNDPSPR-PSITMSYFYCESCHQNF  97
           IA A+IG LF+ + + P    P + +SYF C+SC Q+F
Sbjct  61  IAGAVIGGLFSGLLDTPQRAVPQLPISYFQCQSCRQSF  98


>A0A833UPA8 LITAF domain-containing protein [Acinetobacter bereziniae]
Length=98

 Score = 101 bits (251),  Expect = 1e-33
 Identities = 44/97 (45%), Positives = 63/97 (65%), Gaps = 0/97 (0%)

Query  1   MQINYPYCHSEHVHRIIHNSSSSHQDTMNSLGSSATFASIGASLTKHLPTHLPLSPWMGG  60
           MQI+ PYCHS+ +HR+  +      +   SL +S   ASIGA+L K LP  +P++PW+GG
Sbjct  1   MQIHCPYCHSDQIHRMTQHIPHERNENPKSLNASINMASIGATLAKTLPMPIPITPWVGG  60

Query  61  IASALIGRLFNSVFNDPSPRPSITMSYFYCESCHQNF  97
           +A A+IG + + VF  P+    I MSYFYC +C Q+F
Sbjct  61  LAGAVIGGIISRVFEPPAHSAPIPMSYFYCANCQQSF  97


>A0A1Q3NL53 Uncharacterized protein [Acinetobacter sp. 38-8]
Length=91

 Score = 100 bits (249),  Expect = 2e-33
 Identities = 47/91 (52%), Positives = 65/91 (71%), Gaps = 1/91 (1%)

Query  1   MQINYPYCHSEHVHRIIHNSSSSHQDTMNSLGSSATFASIGASLTKHLPTHLPLSPWMGG  60
           MQI  PYCHSEHV R++H+ + +  D+ + LG+SATFASIGA L+K L   +P+SPW+GG
Sbjct  1   MQILCPYCHSEHVQRMLHSPAQASDDSSHLLGTSATFASIGAGLSKSLGGQIPISPWIGG  60

Query  61  IASALIGRLFNSVFNDPSPR-PSITMSYFYC  90
           IA A+IG LF+ + + P    P + +SYF C
Sbjct  61  IAGAVIGGLFSGLLDTPQRAVPQLPISYFQC  91


>N8TWQ7 Glycine zipper domain-containing protein [Acinetobacter 
sp. ANC 3789]
Length=95

 Score = 97.1 bits (240),  Expect = 6e-32
 Identities = 47/98 (48%), Positives = 69/98 (70%), Gaps = 3/98 (3%)

Query  1   MQINYPYCHSEHVHRIIHNSSSSHQDTMNSLGSSATFASIGASLTKHLPTHLPLSPWMGG  60
           M I+ PYC+S HV R+I N ++S     +   SSA+FA+IGASL+K LP  +P+SP +GG
Sbjct  1   MSISCPYCYSNHVTRVIQNQTASGSSNGSMFSSSASFATIGASLSKSLP--IPMSPLLGG  58

Query  61  IASALIGRLFNSVFNDPSPRPSITMSYFYCESCHQNFQ  98
           IA A++G L  S+F+D +P+ + +  YFYCE C ++FQ
Sbjct  59  IAGAVVGGLLGSLFDD-APKQAPSYQYFYCEDCGRSFQ  95


>A0A7D4X6D3 Glycine zipper domain-containing protein [Acinetobacter 
sp. FDAARGOS_724]
Length=92

 Score = 93.6 bits (231),  Expect = 1e-30
 Identities = 47/98 (48%), Positives = 70/98 (71%), Gaps = 6/98 (6%)

Query  1   MQINYPYCHSEHVHRIIHNSSSSHQDTMNSLGSSATFASIGASLTKHLPTHLPLSPWMGG  60
           M +N PYC S+ V ++++   S    T   L +SA+FA+IGAS++K LP  LP+SP++GG
Sbjct  1   MSLNCPYCFSDQVIQVVNQQVSGSDST--GLAASASFATIGASISKSLP--LPVSPFIGG  56

Query  61  IASALIGRLFNSVFNDPSPRPSITMSYFYCESCHQNFQ  98
           IA A+IG LF+SVF++  P+  ITM+Y++C  C QNF+
Sbjct  57  IAGAVIGGLFSSVFDE--PKKPITMTYYHCNHCQQNFR  92


>A0A1E3GM86 Glycine zipper domain-containing protein [Acinetobacter 
sp. 51m]
Length=92

 Score = 93.6 bits (231),  Expect = 1e-30
 Identities = 48/98 (49%), Positives = 70/98 (71%), Gaps = 6/98 (6%)

Query  1   MQINYPYCHSEHVHRIIHNSSSSHQDTMNSLGSSATFASIGASLTKHLPTHLPLSPWMGG  60
           M +N PYC S+ V ++I+   S    T   L +SA+FA+IGAS++K LP  LP+SP++GG
Sbjct  1   MSLNCPYCFSDQVIQVINQQVSGSDST--GLAASASFATIGASISKGLP--LPVSPFIGG  56

Query  61  IASALIGRLFNSVFNDPSPRPSITMSYFYCESCHQNFQ  98
           IA A+IG LF+SVF++  P+  ITM+Y++C  C QNF+
Sbjct  57  IAGAVIGGLFSSVFDE--PKKPITMTYYHCNHCQQNFR  92


>D0SUB5 Glycine zipper domain-containing protein [Acinetobacter 
lwoffii SH145]
Length=92

 Score = 93.2 bits (230),  Expect = 2e-30
 Identities = 46/98 (47%), Positives = 71/98 (72%), Gaps = 6/98 (6%)

Query  1   MQINYPYCHSEHVHRIIHNSSSSHQDTMNSLGSSATFASIGASLTKHLPTHLPLSPWMGG  60
           M +N PYC S+ V ++++   S  + T   + +SA+FA+IGAS++K LP  LP+SP++GG
Sbjct  1   MSLNCPYCFSDQVIQVVNQQVSGSEST--GIAASASFATIGASISKGLP--LPVSPFIGG  56

Query  61  IASALIGRLFNSVFNDPSPRPSITMSYFYCESCHQNFQ  98
           IA A+IG LF+SVF++  P+  ITM+Y++C  C QNF+
Sbjct  57  IAGAVIGGLFSSVFDE--PKKPITMTYYHCNHCQQNFR  92


>A0A6N1MXX1 Glycine zipper domain-containing protein [Acinetobacter 
lwoffii]
Length=92

 Score = 93.2 bits (230),  Expect = 2e-30
 Identities = 47/98 (48%), Positives = 70/98 (71%), Gaps = 6/98 (6%)

Query  1   MQINYPYCHSEHVHRIIHNSSSSHQDTMNSLGSSATFASIGASLTKHLPTHLPLSPWMGG  60
           M +N PYC S+ V ++++   S    T   L +SA+FA+IGAS++K LP  LP+SP++GG
Sbjct  1   MSLNCPYCFSDQVIQVVNQQVSGSDST--GLAASASFATIGASISKGLP--LPVSPFIGG  56

Query  61  IASALIGRLFNSVFNDPSPRPSITMSYFYCESCHQNFQ  98
           IA A+IG LF+SVF++  P+  ITM+Y++C  C QNF+
Sbjct  57  IAGAVIGGLFSSVFDE--PKKPITMTYYHCNHCQQNFR  92


>A0A3B7LST3 Uncharacterized protein [Acinetobacter chinensis]
Length=102

 Score = 40.8 bits (94),  Expect = 7e-10
 Identities = 28/101 (28%), Positives = 47/101 (47%), Gaps = 8/101 (8%)

Query  1   MQINYPYCHSEHVHRIIHNSSSSHQDTMNSLGSSATFASIGASLTKHLPTHLPLSPWMGG  60
           M I+ PYCHS+ V+ +  +    H+   + +   +   + G  L K L   L LSPW+ G
Sbjct  1   MFIHCPYCHSDQVYPVFVSHPHGHRPEQSPVSLISQLGA-GRILFKTLSGGLRLSPWVAG  59

Query  61  IASALI----GRLFNSVFNDPSPRPSITMSYFYCESCHQNF  97
           +A  L+      L  +  ND     S   + + C+ C ++F
Sbjct  60  LAEVLLRAACAHLMETHRNDTGAGIS---TGYCCKICQRSF  97



Lambda      K        H        a         alpha
   0.326    0.134    0.437    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 62752


  Database: dad6ec857b1cbf55d456b9f1dee37cd1.TrEMBL.fasta
    Posted date:  May 20, 2024  2:43 PM
  Number of letters in database: 1,148
  Number of sequences in database:  12



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40