BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 030d588a583506281116ad6d347e92d2.SwissProt.fasta
6 sequences; 1,740 total letters
Query= ACIAD2869
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
P64429 Uncharacterized protein YpfJ [Escherichia coli (strain K12)] 290 6e-102
P64430 Uncharacterized protein YpfJ [Escherichia coli O6:H1 (stra... 290 6e-102
P64431 Uncharacterized protein YpfJ [Escherichia coli O157:H7] 290 6e-102
P9WL85 Uncharacterized protein Rv2575 [Mycobacterium tuberculosis... 185 5e-61
P9WL84 Uncharacterized protein MT2651 [Mycobacterium tuberculosis... 185 5e-61
P65020 Uncharacterized protein Mb2605 [Mycobacterium bovis (strai... 185 5e-61
>P64429 Uncharacterized protein YpfJ [Escherichia coli (strain
K12)]
Length=287
Score = 290 bits (741), Expect = 6e-102
Identities = 153/309 (50%), Positives = 201/309 (65%), Gaps = 33/309 (11%)
Query 1 MRWKGRRVSSNVEDRRGS--GAKVGGIS---------IIGLVVAFVAWKFFGVDPQQAYQ 49
MRW+GRR S NVEDRR S G +GG +I L+V VA ++GVD
Sbjct 1 MRWQGRRESDNVEDRRNSSGGPSMGGPGFRLPSGKGGLILLIVVLVAG-YYGVD------ 53
Query 50 ATQQITAAQNPSSNAPQQLTADQKEASDFVGTILADTEDTWTPIFKQLGQTYVPPKLVLF 109
T +T + + ++ ++ EA+ F ILA TEDTW F+++G+TY PKLV++
Sbjct 54 LTGLMTGQPVSQQQSTRSISPNEDEAAKFTSVILATTEDTWGQQFEKMGKTYQQPKLVMY 113
Query 110 NGIVQSGCGTAQSAMGPFYCPTDQKVYIDTSFFKDMREQMGISGEQNQTELSRQDQAGDF 169
G+ ++GCG QS MGPFYCP D VYID SF+ DM++++G GDF
Sbjct 114 RGMTRTGCGAGQSIMGPFYCPADGTVYIDLSFYDDMKDKLGAD--------------GDF 159
Query 170 AQAYVVAHEVGHHIQNLLGISSQVQQAQAQGSRAQANQLSVRLELQADCFAGIWANHNQQ 229
AQ YV+AHEVGHH+Q LLGI +V+Q Q ++A+ N+LSVR+ELQADCFAG+W H+ Q
Sbjct 160 AQGYVIAHEVGHHVQKLLGIEPKVRQLQQNATQAEVNRLSVRMELQADCFAGVW-GHSMQ 218
Query 230 RTQFLEAGDIEEAMDAAQKIGDDYLQKRSTGQVVPDSFTHGTSQQRMHWFEVGLKSGDLN 289
+ LE GD+EEA++AAQ IGDD LQ++S G+VVPDSFTHGTSQQR WF+ G SGD
Sbjct 219 QQGVLETGDLEEALNAAQAIGDDRLQQQSQGRVVPDSFTHGTSQQRYSWFKRGFDSGDPA 278
Query 290 QCDTFKASI 298
QC+TF SI
Sbjct 279 QCNTFGKSI 287
>P64430 Uncharacterized protein YpfJ [Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC)]
Length=287
Score = 290 bits (741), Expect = 6e-102
Identities = 153/309 (50%), Positives = 201/309 (65%), Gaps = 33/309 (11%)
Query 1 MRWKGRRVSSNVEDRRGS--GAKVGGIS---------IIGLVVAFVAWKFFGVDPQQAYQ 49
MRW+GRR S NVEDRR S G +GG +I L+V VA ++GVD
Sbjct 1 MRWQGRRESDNVEDRRNSSGGPSMGGPGFRLPSGKGGLILLIVVLVAG-YYGVD------ 53
Query 50 ATQQITAAQNPSSNAPQQLTADQKEASDFVGTILADTEDTWTPIFKQLGQTYVPPKLVLF 109
T +T + + ++ ++ EA+ F ILA TEDTW F+++G+TY PKLV++
Sbjct 54 LTGLMTGQPVSQQQSTRSISPNEDEAAKFTSVILATTEDTWGQQFEKMGKTYQQPKLVMY 113
Query 110 NGIVQSGCGTAQSAMGPFYCPTDQKVYIDTSFFKDMREQMGISGEQNQTELSRQDQAGDF 169
G+ ++GCG QS MGPFYCP D VYID SF+ DM++++G GDF
Sbjct 114 RGMTRTGCGAGQSIMGPFYCPADGTVYIDLSFYDDMKDKLGAD--------------GDF 159
Query 170 AQAYVVAHEVGHHIQNLLGISSQVQQAQAQGSRAQANQLSVRLELQADCFAGIWANHNQQ 229
AQ YV+AHEVGHH+Q LLGI +V+Q Q ++A+ N+LSVR+ELQADCFAG+W H+ Q
Sbjct 160 AQGYVIAHEVGHHVQKLLGIEPKVRQLQQNATQAEVNRLSVRMELQADCFAGVW-GHSMQ 218
Query 230 RTQFLEAGDIEEAMDAAQKIGDDYLQKRSTGQVVPDSFTHGTSQQRMHWFEVGLKSGDLN 289
+ LE GD+EEA++AAQ IGDD LQ++S G+VVPDSFTHGTSQQR WF+ G SGD
Sbjct 219 QQGVLETGDLEEALNAAQAIGDDRLQQQSQGRVVPDSFTHGTSQQRYSWFKRGFDSGDPA 278
Query 290 QCDTFKASI 298
QC+TF SI
Sbjct 279 QCNTFGKSI 287
>P64431 Uncharacterized protein YpfJ [Escherichia coli O157:H7]
Length=287
Score = 290 bits (741), Expect = 6e-102
Identities = 153/309 (50%), Positives = 201/309 (65%), Gaps = 33/309 (11%)
Query 1 MRWKGRRVSSNVEDRRGS--GAKVGGIS---------IIGLVVAFVAWKFFGVDPQQAYQ 49
MRW+GRR S NVEDRR S G +GG +I L+V VA ++GVD
Sbjct 1 MRWQGRRESDNVEDRRNSSGGPSMGGPGFRLPSGKGGLILLIVVLVAG-YYGVD------ 53
Query 50 ATQQITAAQNPSSNAPQQLTADQKEASDFVGTILADTEDTWTPIFKQLGQTYVPPKLVLF 109
T +T + + ++ ++ EA+ F ILA TEDTW F+++G+TY PKLV++
Sbjct 54 LTGLMTGQPVSQQQSTRSISPNEDEAAKFTSVILATTEDTWGQQFEKMGKTYQQPKLVMY 113
Query 110 NGIVQSGCGTAQSAMGPFYCPTDQKVYIDTSFFKDMREQMGISGEQNQTELSRQDQAGDF 169
G+ ++GCG QS MGPFYCP D VYID SF+ DM++++G GDF
Sbjct 114 RGMTRTGCGAGQSIMGPFYCPADGTVYIDLSFYDDMKDKLGAD--------------GDF 159
Query 170 AQAYVVAHEVGHHIQNLLGISSQVQQAQAQGSRAQANQLSVRLELQADCFAGIWANHNQQ 229
AQ YV+AHEVGHH+Q LLGI +V+Q Q ++A+ N+LSVR+ELQADCFAG+W H+ Q
Sbjct 160 AQGYVIAHEVGHHVQKLLGIEPKVRQLQQNATQAEVNRLSVRMELQADCFAGVW-GHSMQ 218
Query 230 RTQFLEAGDIEEAMDAAQKIGDDYLQKRSTGQVVPDSFTHGTSQQRMHWFEVGLKSGDLN 289
+ LE GD+EEA++AAQ IGDD LQ++S G+VVPDSFTHGTSQQR WF+ G SGD
Sbjct 219 QQGVLETGDLEEALNAAQAIGDDRLQQQSQGRVVPDSFTHGTSQQRYSWFKRGFDSGDPA 278
Query 290 QCDTFKASI 298
QC+TF SI
Sbjct 279 QCNTFGKSI 287
>P9WL85 Uncharacterized protein Rv2575 [Mycobacterium tuberculosis
(strain ATCC 25618 / H37Rv)]
Length=293
Score = 185 bits (470), Expect = 5e-61
Identities = 119/312 (38%), Positives = 170/312 (54%), Gaps = 44/312 (14%)
Query 4 KGRRVSSNVEDRRGSGA----KVGGISIIGLVVAFVAWKFFGVDP-----QQAYQATQQI 54
+G ++ ++ GSG +GG + GL+V VA GVDP QQ +
Sbjct 5 EGVQIDTSTTSTSGSGGGRRLAIGG-GLGGLLVVVVAM-LLGVDPGGVLSQQPLDTRDHV 62
Query 55 TAAQNPSSNAPQQLTADQKEASDFVGTILADTEDTWTPIFKQLGQTYVPPKLVLFNGIVQ 114
P + Q T +A+ FV + T ++ ++K L Y P + LF+G V
Sbjct 63 A----PGFDLSQCRTG--ADANRFVQCRVVATGNSVDAVWKPLLPGYTRPHMRLFSGQVG 116
Query 115 SGCGTAQSAMGPFYCPTDQKVYIDTSFFKDMREQMGISGEQNQTELSRQDQAGDFAQAYV 174
+GCG A S +GPFYCP D+ Y DT FF+ + Q G SG G FA+ YV
Sbjct 117 TGCGPASSEVGPFYCPVDKTAYFDTDFFQVLVTQFGSSG-------------GPFAEEYV 163
Query 175 VAHEVGHHIQNLLGISSQVQQAQAQGSRAQANQLSVRLELQADCFAGIWANH----NQQR 230
VAHE GHH+QNLLG+ + QQ AQG+ VR ELQADC+AG+WA + Q+
Sbjct 164 VAHEYGHHVQNLLGVLGRAQQG-AQGAAGSG----VRTELQADCYAGVWAYYASTVKQES 218
Query 231 T-----QFLEAGDIEEAMDAAQKIGDDYLQKRSTGQVVPDSFTHGTSQQRMHWFEVGLKS 285
T + L DI++A+ AA +GDD +Q+++TG+ P+++THG++ QR WF VG ++
Sbjct 219 TGVPYLEPLSDKDIQDALAAAAAVGDDRIQQQTTGRTNPETWTHGSAAQRQKWFTVGYQT 278
Query 286 GDLNQCDTFKAS 297
GD N CDTF A+
Sbjct 279 GDPNICDTFSAA 290
>P9WL84 Uncharacterized protein MT2651 [Mycobacterium tuberculosis
(strain CDC 1551 / Oshkosh)]
Length=293
Score = 185 bits (470), Expect = 5e-61
Identities = 119/312 (38%), Positives = 170/312 (54%), Gaps = 44/312 (14%)
Query 4 KGRRVSSNVEDRRGSGA----KVGGISIIGLVVAFVAWKFFGVDP-----QQAYQATQQI 54
+G ++ ++ GSG +GG + GL+V VA GVDP QQ +
Sbjct 5 EGVQIDTSTTSTSGSGGGRRLAIGG-GLGGLLVVVVAM-LLGVDPGGVLSQQPLDTRDHV 62
Query 55 TAAQNPSSNAPQQLTADQKEASDFVGTILADTEDTWTPIFKQLGQTYVPPKLVLFNGIVQ 114
P + Q T +A+ FV + T ++ ++K L Y P + LF+G V
Sbjct 63 A----PGFDLSQCRTG--ADANRFVQCRVVATGNSVDAVWKPLLPGYTRPHMRLFSGQVG 116
Query 115 SGCGTAQSAMGPFYCPTDQKVYIDTSFFKDMREQMGISGEQNQTELSRQDQAGDFAQAYV 174
+GCG A S +GPFYCP D+ Y DT FF+ + Q G SG G FA+ YV
Sbjct 117 TGCGPASSEVGPFYCPVDKTAYFDTDFFQVLVTQFGSSG-------------GPFAEEYV 163
Query 175 VAHEVGHHIQNLLGISSQVQQAQAQGSRAQANQLSVRLELQADCFAGIWANH----NQQR 230
VAHE GHH+QNLLG+ + QQ AQG+ VR ELQADC+AG+WA + Q+
Sbjct 164 VAHEYGHHVQNLLGVLGRAQQG-AQGAAGSG----VRTELQADCYAGVWAYYASTVKQES 218
Query 231 T-----QFLEAGDIEEAMDAAQKIGDDYLQKRSTGQVVPDSFTHGTSQQRMHWFEVGLKS 285
T + L DI++A+ AA +GDD +Q+++TG+ P+++THG++ QR WF VG ++
Sbjct 219 TGVPYLEPLSDKDIQDALAAAAAVGDDRIQQQTTGRTNPETWTHGSAAQRQKWFTVGYQT 278
Query 286 GDLNQCDTFKAS 297
GD N CDTF A+
Sbjct 279 GDPNICDTFSAA 290
>P65020 Uncharacterized protein Mb2605 [Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97)]
Length=293
Score = 185 bits (470), Expect = 5e-61
Identities = 119/312 (38%), Positives = 170/312 (54%), Gaps = 44/312 (14%)
Query 4 KGRRVSSNVEDRRGSGA----KVGGISIIGLVVAFVAWKFFGVDP-----QQAYQATQQI 54
+G ++ ++ GSG +GG + GL+V VA GVDP QQ +
Sbjct 5 EGVQIDTSTTSTSGSGGGRRLAIGG-GLGGLLVVVVAM-LLGVDPGGVLSQQPLDTRDHV 62
Query 55 TAAQNPSSNAPQQLTADQKEASDFVGTILADTEDTWTPIFKQLGQTYVPPKLVLFNGIVQ 114
P + Q T +A+ FV + T ++ ++K L Y P + LF+G V
Sbjct 63 A----PGFDLSQCRTG--ADANRFVQCRVVATGNSVDAVWKPLLPGYTRPHMRLFSGQVG 116
Query 115 SGCGTAQSAMGPFYCPTDQKVYIDTSFFKDMREQMGISGEQNQTELSRQDQAGDFAQAYV 174
+GCG A S +GPFYCP D+ Y DT FF+ + Q G SG G FA+ YV
Sbjct 117 TGCGPASSEVGPFYCPVDKTAYFDTDFFQVLVTQFGSSG-------------GPFAEEYV 163
Query 175 VAHEVGHHIQNLLGISSQVQQAQAQGSRAQANQLSVRLELQADCFAGIWANH----NQQR 230
VAHE GHH+QNLLG+ + QQ AQG+ VR ELQADC+AG+WA + Q+
Sbjct 164 VAHEYGHHVQNLLGVLGRAQQG-AQGAAGSG----VRTELQADCYAGVWAYYASTVKQES 218
Query 231 T-----QFLEAGDIEEAMDAAQKIGDDYLQKRSTGQVVPDSFTHGTSQQRMHWFEVGLKS 285
T + L DI++A+ AA +GDD +Q+++TG+ P+++THG++ QR WF VG ++
Sbjct 219 TGVPYLEPLSDKDIQDALAAAAAVGDDRIQQQTTGRTNPETWTHGSAAQRQKWFTVGYQT 278
Query 286 GDLNQCDTFKAS 297
GD N CDTF A+
Sbjct 279 GDPNICDTFSAA 290
Lambda K H a alpha
0.319 0.132 0.392 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 394632
Database: 030d588a583506281116ad6d347e92d2.SwissProt.fasta
Posted date: Jun 3, 2024 2:12 AM
Number of letters in database: 1,740
Number of sequences in database: 6
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
