BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 264022c8f4c73bf48da00395463944ca.SwissProt.fasta
8 sequences; 2,011 total letters
Query= ACIAD3018
Length=309
Score E
Sequences producing significant alignments: (Bits) Value
P43262 Intermembrane phospholipid transport system lipoprotein Ml... 113 1e-33
P76506 Intermembrane phospholipid transport system lipoprotein Ml... 112 2e-33
Q4UND1 Uncharacterized protein RF_0076 [Rickettsia felis (strain ... 100 1e-28
Q92JE4 Uncharacterized protein RC0123 [Rickettsia conorii (strain... 97.8 1e-27
Q68XW1 Uncharacterized protein RT0044 [Rickettsia typhi (strain A... 96.7 3e-27
Q1RGV2 Uncharacterized protein RBE_1331 [Rickettsia bellii (strai... 94.0 3e-26
Q9ZE54 Uncharacterized protein RP093 [Rickettsia prowazekii (stra... 93.6 4e-26
P44042 Intermembrane phospholipid transport system lipoprotein Ml... 92.4 9e-26
>P43262 Intermembrane phospholipid transport system lipoprotein
MlaA [Shigella flexneri]
Length=251
Score = 113 bits (283), Expect = 1e-33
Identities = 78/225 (35%), Positives = 112/225 (50%), Gaps = 12/225 (5%)
Query 88 DPLQPLNREFYAFN-DMLDRNIVRPIAVQYAAKTPEDVRGSYRQFRKNLGEPWNAVNQII 146
DPL+ NR Y FN ++LD IVRP+AV + P+ R F NL EP VN +
Sbjct 30 DPLEGFNRTMYNFNFNVLDPYIVRPVAVAWRDYVPQPARNGLSNFTGNLEEPAVMVNYFL 89
Query 147 QGRPGRAAKTLGRFTINTLTTLG----LADPARRLGLPAEEESFGVTLGYYGVPSGPFLM 202
QG P + RF +NT+ +G +A A E FG TLG+YGV GP++
Sbjct 90 QGDPYQGMVHFTRFFLNTILGMGGFIDVAGMANPKLQRTEPHRFGSTLGHYGVGYGPYVQ 149
Query 203 LPFFGPSTLRDGLGLAVDSQARPQKYIMDDQQGLYWSTNLVQAIDTRSQLLDIEQILQ-- 260
LPF+G TLRD G D+ ++ W+ ++ I+TR+QLLD + +L+
Sbjct 150 LPFYGSFTLRDDGGDMADALYPVLSWLTWPMSVGKWT---LEGIETRAQLLDSDGLLRQS 206
Query 261 GDKYAVIRDLYLQRKSFQIS--EKKGNSTEQISFVGDDDDDQDND 303
D Y ++R+ Y QR F + E K + DD D D++
Sbjct 207 SDPYIMVREAYFQRHDFIANGGELKPQENPNAQAIQDDLKDIDSE 251
Score = 16.2 bits (30), Expect = 6.7
Identities = 8/12 (67%), Positives = 9/12 (75%), Gaps = 1/12 (8%)
Query 77 NANAAQPDDVKD 88
NA A Q DD+KD
Sbjct 237 NAQAIQ-DDLKD 247
>P76506 Intermembrane phospholipid transport system lipoprotein
MlaA [Escherichia coli (strain K12)]
Length=251
Score = 112 bits (281), Expect = 2e-33
Identities = 78/225 (35%), Positives = 111/225 (49%), Gaps = 12/225 (5%)
Query 88 DPLQPLNREFYAFN-DMLDRNIVRPIAVQYAAKTPEDVRGSYRQFRKNLGEPWNAVNQII 146
DPL+ NR Y FN ++LD IVRP+AV + P+ R F NL EP VN +
Sbjct 30 DPLEGFNRTMYNFNFNVLDPYIVRPVAVAWRDYVPQPARNGLSNFTGNLEEPAVMVNYFL 89
Query 147 QGRPGRAAKTLGRFTINTLTTLG----LADPARRLGLPAEEESFGVTLGYYGVPSGPFLM 202
QG P + RF +NT+ +G +A A E FG TLG+YGV GP++
Sbjct 90 QGDPYQGMVHFTRFFLNTILGMGGFIDVAGMANPKLQRTEPHRFGSTLGHYGVGYGPYVQ 149
Query 203 LPFFGPSTLRDGLGLAVDSQARPQKYIMDDQQGLYWSTNLVQAIDTRSQLLDIEQILQ-- 260
LPF+G TLRD G D ++ W+ ++ I+TR+QLLD + +L+
Sbjct 150 LPFYGSFTLRDDGGDMADGFYPVLSWLTWPMSVGKWT---LEGIETRAQLLDSDGLLRQS 206
Query 261 GDKYAVIRDLYLQRKSFQIS--EKKGNSTEQISFVGDDDDDQDND 303
D Y ++R+ Y QR F + E K + DD D D++
Sbjct 207 SDPYIMVREAYFQRHDFIANGGELKPQENPNAQAIQDDLKDIDSE 251
Score = 16.2 bits (30), Expect = 6.7
Identities = 8/12 (67%), Positives = 9/12 (75%), Gaps = 1/12 (8%)
Query 77 NANAAQPDDVKD 88
NA A Q DD+KD
Sbjct 237 NAQAIQ-DDLKD 247
>Q4UND1 Uncharacterized protein RF_0076 [Rickettsia felis (strain
ATCC VR-1525 / URRWXCal2)]
Length=251
Score = 100 bits (249), Expect = 1e-28
Identities = 53/130 (41%), Positives = 78/130 (60%), Gaps = 1/130 (1%)
Query 85 DVKDPLQPLNREFYAFNDMLDRNIVRPIAVQYAAKTPEDVRGSYRQFRKNLGEPWNAVNQ 144
+V DP + NR+ +AFN +LD I+RP+A+ Y T + V+ F N+ P AVN
Sbjct 41 EVYDPYEKFNRKVFAFNSVLDYIILRPLAIGYKNITNDYVKARVNSFVSNVDTPLTAVNY 100
Query 145 IIQGRPGRAAKTLGRFTINTLTTL-GLADPARRLGLPAEEESFGVTLGYYGVPSGPFLML 203
+Q + K++ RF INT + GL D A ++GLP+E ++FG TL +YGV GP+L+L
Sbjct 101 GLQLNYDKTMKSVWRFLINTTLGIGGLFDVAGKVGLPSERQTFGSTLAHYGVAPGPYLVL 160
Query 204 PFFGPSTLRD 213
P G + RD
Sbjct 161 PIIGSTNARD 170
>Q92JE4 Uncharacterized protein RC0123 [Rickettsia conorii (strain
ATCC VR-613 / Malish 7)]
Length=251
Score = 97.8 bits (242), Expect = 1e-27
Identities = 51/130 (39%), Positives = 77/130 (59%), Gaps = 1/130 (1%)
Query 85 DVKDPLQPLNREFYAFNDMLDRNIVRPIAVQYAAKTPEDVRGSYRQFRKNLGEPWNAVNQ 144
+V DP + NR+ + FN +LD I+RP+AV Y T + V+ F N+ P A+N
Sbjct 41 EVYDPYEKFNRKVFVFNSVLDYIILRPLAVGYKNITNDYVKARVNSFVSNVDTPLTAINY 100
Query 145 IIQGRPGRAAKTLGRFTINTLTTL-GLADPARRLGLPAEEESFGVTLGYYGVPSGPFLML 203
+Q + K++ RF INT + GL D A ++GLP++ ++FG TL +YGV GP+L+L
Sbjct 101 GLQLNYDKTMKSVWRFLINTTLGIGGLFDVAGKVGLPSDRQTFGSTLAHYGVAPGPYLVL 160
Query 204 PFFGPSTLRD 213
P G + RD
Sbjct 161 PIIGSTNARD 170
>Q68XW1 Uncharacterized protein RT0044 [Rickettsia typhi (strain
ATCC VR-144 / Wilmington)]
Length=251
Score = 96.7 bits (239), Expect = 3e-27
Identities = 51/130 (39%), Positives = 77/130 (59%), Gaps = 1/130 (1%)
Query 85 DVKDPLQPLNREFYAFNDMLDRNIVRPIAVQYAAKTPEDVRGSYRQFRKNLGEPWNAVNQ 144
+V DP + NR+ +AFN +LD I+RP+AV Y T + ++ F N+ P AVN
Sbjct 41 EVYDPYEKFNRKVFAFNSVLDHIILRPLAVGYKNITNDYIKARVNSFVSNVYTPLTAVNY 100
Query 145 IIQGRPGRAAKTLGRFTINTLTTL-GLADPARRLGLPAEEESFGVTLGYYGVPSGPFLML 203
+Q + K++ RF INT + GL D A ++GL ++ ++FG TL +YGV GP+L+L
Sbjct 101 GLQLNYDKTIKSVWRFLINTTLGIGGLFDVASKVGLQSDRQTFGSTLAHYGVAPGPYLVL 160
Query 204 PFFGPSTLRD 213
P G + RD
Sbjct 161 PIIGSTNARD 170
>Q1RGV2 Uncharacterized protein RBE_1331 [Rickettsia bellii (strain
RML369-C)]
Length=255
Score = 94.0 bits (232), Expect = 3e-26
Identities = 66/204 (32%), Positives = 98/204 (48%), Gaps = 7/204 (3%)
Query 85 DVKDPLQPLNREFYAFNDMLDRNIVRPIAVQYAAKTPEDVRGSYRQFRKNLGEPWNAVNQ 144
+V DP + NR+ +AFN +LD +RP+AV Y T + ++ F N+ P AVN
Sbjct 41 EVYDPYEKFNRKIFAFNSVLDYIFLRPLAVGYKNLTNDYMKARVNSFVGNIDMPLTAVNY 100
Query 145 IIQGRPGRAAKTLGRFTINTLTTL-GLADPARRLGLPAEEESFGVTLGYYGVPSGPFLML 203
+Q + K++ RF INT + GL D A ++GL ++ ++FG TL +YGV GP+L+L
Sbjct 101 GLQLNYDKTMKSVWRFIINTTLGIGGLFDVAGKVGLSSDRQTFGNTLAHYGVGPGPYLVL 160
Query 204 PFFGPSTLRDGLGLAVDSQA-RPQKYIMDDQQGLYWSTNLVQAIDTRSQLLDIEQILQG- 261
P G + RD + A P Y L S V I+ R +L +
Sbjct 161 PIIGSTNARDMTDPIFTNYALNPLMYYTHKDFEL--SVLAVSKINDRYNVLSFSDYVMKN 218
Query 262 --DKYAVIRDLYLQRKSFQISEKK 283
D YA IR Q + + K
Sbjct 219 SLDPYATIRSALHQAREASVQYPK 242
>Q9ZE54 Uncharacterized protein RP093 [Rickettsia prowazekii (strain
Madrid E)]
Length=251
Score = 93.6 bits (231), Expect = 4e-26
Identities = 50/130 (38%), Positives = 75/130 (58%), Gaps = 1/130 (1%)
Query 85 DVKDPLQPLNREFYAFNDMLDRNIVRPIAVQYAAKTPEDVRGSYRQFRKNLGEPWNAVNQ 144
+V DP + NR+ +AFN +LD I RP+AV Y T + ++ F N+ P VN
Sbjct 41 EVYDPYEKFNRKVFAFNSVLDYIIFRPLAVGYKNITNDYIKARVNSFISNVYTPLTVVNY 100
Query 145 IIQGRPGRAAKTLGRFTINTLTTL-GLADPARRLGLPAEEESFGVTLGYYGVPSGPFLML 203
+Q + K++ RF INT + GL D A ++GL ++ ++FG TL +YGV GP+L+L
Sbjct 101 GLQLNYDKTMKSVWRFLINTTLGIGGLFDVASKVGLQSDRQTFGSTLAHYGVAPGPYLVL 160
Query 204 PFFGPSTLRD 213
P G + RD
Sbjct 161 PIIGSTNARD 170
>P44042 Intermembrane phospholipid transport system lipoprotein
MlaA [Haemophilus influenzae (strain ATCC 51907 / DSM 11121
/ KW20 / Rd)]
Length=250
Score = 92.4 bits (228), Expect = 9e-26
Identities = 64/216 (30%), Positives = 107/216 (50%), Gaps = 13/216 (6%)
Query 77 NANAAQPDDVKDPLQPLNREFYAFN-DMLDRNIVRPIAVQYAAKTPEDVRGSYRQFRKNL 135
N + Q + D L+ NR + FN +++DR ++ P A + P+ + NL
Sbjct 22 NNDTKQVSERNDSLEDFNRTMWKFNYNVIDRYVLEPAAKGWNNYVPKPISSGLAGIANNL 81
Query 136 GEPWNAVNQIIQGRPGRAAKTLGRFTINTLTTLG----LADPARRLGLPAEEESFGVTLG 191
EP + +N++I+G P +A RF INT+ LG A ++ L + + FG TLG
Sbjct 82 DEPVSFINRLIEGEPKKAFVHFNRFWINTVFGLGGFIDFASASKELRID-NQRGFGETLG 140
Query 192 YYGVPSGPFLMLPFFGPSTLRDGLGLAVDSQARPQKYIMDDQQGLYWSTNL--VQAIDTR 249
YGV +G +++LP + +T R G VD+ Y G W+ VQA+D R
Sbjct 141 SYGVDAGTYIVLPIYNATTPRQLTGAVVDA---AYMYPFWQWVGGPWALVKYGVQAVDAR 197
Query 250 SQLLDIEQILQ--GDKYAVIRDLYLQRKSFQISEKK 283
++ L+ ++L+ D Y R+ Y Q F++++ K
Sbjct 198 AKNLNNAELLRQAQDPYITFREAYYQNLQFKVNDGK 233
Score = 16.5 bits (31), Expect = 5.1
Identities = 17/79 (22%), Positives = 37/79 (47%), Gaps = 12/79 (15%)
Query 8 FVGLLSAGMSFSIFAQDAQADIASNTSARQAAMSDQDTNDQSSSTTSHFQSIRDLKNELK 67
+VG A + + + A DA+A +N + A T + +++Q+++ N+ K
Sbjct 179 WVGGPWALVKYGVQAVDARAKNLNNAELLRQAQDPYITFRE-----AYYQNLQFKVNDGK 233
Query 68 NVKASDFKVNANAAQPDDV 86
V++ + + PDD+
Sbjct 234 LVESKE-------SLPDDI 245
Lambda K H a alpha
0.318 0.134 0.381 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 458730
Database: 264022c8f4c73bf48da00395463944ca.SwissProt.fasta
Posted date: Jun 1, 2024 7:39 PM
Number of letters in database: 2,011
Number of sequences in database: 8
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
