BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 37afb9528540f9aea2a023011ae94f72.SwissProt.fasta
24 sequences; 7,150 total letters
Query= ACIAD3059
Length=284
Score E
Sequences producing significant alignments: (Bits) Value
Q6F856 Nucleotide-binding protein ACIAD3059 [Acinetobacter baylyi... 574 0.0
B7H009 Nucleotide-binding protein ABBFA_002973 [Acinetobacter bau... 533 0.0
B7I684 Nucleotide-binding protein AB57_0691 [Acinetobacter bauman... 533 0.0
A3M295 Nucleotide-binding protein A1S_0588 [Acinetobacter baumann... 533 0.0
B2HTG6 Nucleotide-binding protein ACICU_00591 [Acinetobacter baum... 533 0.0
B0V5P6 Nucleotide-binding protein ABAYE3173 [Acinetobacter bauman... 533 0.0
B0VKK2 Nucleotide-binding protein ABSDF2931 [Acinetobacter bauman... 530 0.0
A1U474 Nucleotide-binding protein Maqu_2718 [Marinobacter nauticu... 267 1e-92
Q2SBH8 Nucleotide-binding protein HCH_05324 [Hahella chejuensis (... 261 2e-90
Q6LMB3 Nucleotide-binding protein PBPRA3258 [Photobacterium profu... 255 4e-88
Q1QEJ2 Nucleotide-binding protein Pcryo_0127 [Psychrobacter cryoh... 256 9e-88
A5WHC8 Nucleotide-binding protein PsycPRwf_2129 [Psychrobacter sp... 252 2e-86
A4XQL9 Nucleotide-binding protein Pmen_0867 [Pseudomonas mendocin... 250 5e-86
Q4FVG6 Nucleotide-binding protein Psyc_0118 [Psychrobacter arctic... 251 6e-86
P17163 RNase adapter protein RapZ [Klebsiella oxytoca] 237 5e-81
Q9ZA87 RNase adapter protein RapZ [Proteus mirabilis (strain HI43... 234 6e-80
P0A894 RNase adapter protein RapZ [Escherichia coli (strain K12)] 231 9e-79
Q9S0K9 Nucleotide-binding protein in ptsN-ptsO intergenic region ... 230 3e-78
Q9KIQ6 Nucleotide-binding protein VIBHAR_03667 [Vibrio campbellii... 227 7e-77
O06973 Nucleotide-binding protein YvcJ [Bacillus subtilis (strain... 177 3e-57
P96769 Nucleotide-binding protein HI1146 homolog [Aggregatibacter... 94.4 1e-27
P43520 Nucleotide-binding protein in fmt 3'region [Thermus thermo... 67.8 1e-17
F4JZN6 3-dehydrosphinganine reductase TSC10B [Arabidopsis thaliana] 37.4 4e-06
F4KAF2 Protein MICRORCHIDIA 4 [Arabidopsis thaliana] 36.2 1e-05
>Q6F856 Nucleotide-binding protein ACIAD3059 [Acinetobacter baylyi
(strain ATCC 33305 / BD413 / ADP1)]
Length=283
Score = 574 bits (1479), Expect = 0.0
Identities = 283/283 (100%), Positives = 283/283 (100%), Gaps = 0/283 (0%)
Query 1 MKRILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIVAKLDHENNLEQLALGVDV 60
MKRILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIVAKLDHENNLEQLALGVDV
Sbjct 1 MKRILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIVAKLDHENNLEQLALGVDV 60
Query 61 RSTRADMQEFDLVFEQLQKHGTVDVIYLTTQDQELIARFSASRRPHPLASRFKSLNECIQ 120
RSTRADMQEFDLVFEQLQKHGTVDVIYLTTQDQELIARFSASRRPHPLASRFKSLNECIQ
Sbjct 61 RSTRADMQEFDLVFEQLQKHGTVDVIYLTTQDQELIARFSASRRPHPLASRFKSLNECIQ 120
Query 121 EEKQLLLPIQFRSTVHIDTTDKSVHDLKHTLLSKLGQSDKLILILQSFGYKHGIPLDADY 180
EEKQLLLPIQFRSTVHIDTTDKSVHDLKHTLLSKLGQSDKLILILQSFGYKHGIPLDADY
Sbjct 121 EEKQLLLPIQFRSTVHIDTTDKSVHDLKHTLLSKLGQSDKLILILQSFGYKHGIPLDADY 180
Query 181 VFDVRHLPNPHWDLELRRFSGLDEPVRRFLESSDQTNEMFDDIFHFLDKWLPVFAEGHRH 240
VFDVRHLPNPHWDLELRRFSGLDEPVRRFLESSDQTNEMFDDIFHFLDKWLPVFAEGHRH
Sbjct 181 VFDVRHLPNPHWDLELRRFSGLDEPVRRFLESSDQTNEMFDDIFHFLDKWLPVFAEGHRH 240
Query 241 YMTVSIGCTGGQHRSVYIVDRLKKALEAKWSIQVLHREMKHWS 283
YMTVSIGCTGGQHRSVYIVDRLKKALEAKWSIQVLHREMKHWS
Sbjct 241 YMTVSIGCTGGQHRSVYIVDRLKKALEAKWSIQVLHREMKHWS 283
>B7H009 Nucleotide-binding protein ABBFA_002973 [Acinetobacter
baumannii (strain AB307-0294)]
Length=283
Score = 533 bits (1374), Expect = 0.0
Identities = 258/283 (91%), Positives = 273/283 (96%), Gaps = 0/283 (0%)
Query 1 MKRILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIVAKLDHENNLEQLALGVDV 60
MKRILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIVAKLDHENNLEQLALGVDV
Sbjct 1 MKRILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIVAKLDHENNLEQLALGVDV 60
Query 61 RSTRADMQEFDLVFEQLQKHGTVDVIYLTTQDQELIARFSASRRPHPLASRFKSLNECIQ 120
RSTRADMQEFD VFEQLQKHGTVDVIYLTTQDQ+LIARFSASRRPHPLA+RFKSL +CI
Sbjct 61 RSTRADMQEFDHVFEQLQKHGTVDVIYLTTQDQDLIARFSASRRPHPLANRFKSLLQCIH 120
Query 121 EEKQLLLPIQFRSTVHIDTTDKSVHDLKHTLLSKLGQSDKLILILQSFGYKHGIPLDADY 180
EEKQLL+PIQFR+TVHIDTTDKSVHDLKH LLSKLGQSD LI+ILQSFGYKHGIPLDADY
Sbjct 121 EEKQLLIPIQFRATVHIDTTDKSVHDLKHILLSKLGQSDNLIVILQSFGYKHGIPLDADY 180
Query 181 VFDVRHLPNPHWDLELRRFSGLDEPVRRFLESSDQTNEMFDDIFHFLDKWLPVFAEGHRH 240
VFDVRHLPNPHWDLELRRFSGLDEPV++FLE+S Q NEMF+DI HFL KWLP FAEGHRH
Sbjct 181 VFDVRHLPNPHWDLELRRFSGLDEPVKQFLEASPQANEMFEDILHFLKKWLPAFAEGHRH 240
Query 241 YMTVSIGCTGGQHRSVYIVDRLKKALEAKWSIQVLHREMKHWS 283
YMT+SIGCTGGQHRSVY+VDRLK+ALEA+WS+QVLHREMKHWS
Sbjct 241 YMTISIGCTGGQHRSVYMVDRLKQALEAEWSVQVLHREMKHWS 283
>B7I684 Nucleotide-binding protein AB57_0691 [Acinetobacter baumannii
(strain AB0057)]
Length=283
Score = 533 bits (1374), Expect = 0.0
Identities = 258/283 (91%), Positives = 273/283 (96%), Gaps = 0/283 (0%)
Query 1 MKRILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIVAKLDHENNLEQLALGVDV 60
MKRILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIVAKLDHENNLEQLALGVDV
Sbjct 1 MKRILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIVAKLDHENNLEQLALGVDV 60
Query 61 RSTRADMQEFDLVFEQLQKHGTVDVIYLTTQDQELIARFSASRRPHPLASRFKSLNECIQ 120
RSTRADMQEFD VFEQLQKHGTVDVIYLTTQDQ+LIARFSASRRPHPLA+RFKSL +CI
Sbjct 61 RSTRADMQEFDHVFEQLQKHGTVDVIYLTTQDQDLIARFSASRRPHPLANRFKSLLQCIH 120
Query 121 EEKQLLLPIQFRSTVHIDTTDKSVHDLKHTLLSKLGQSDKLILILQSFGYKHGIPLDADY 180
EEKQLL+PIQFR+TVHIDTTDKSVHDLKH LLSKLGQSD LI+ILQSFGYKHGIPLDADY
Sbjct 121 EEKQLLIPIQFRATVHIDTTDKSVHDLKHILLSKLGQSDNLIVILQSFGYKHGIPLDADY 180
Query 181 VFDVRHLPNPHWDLELRRFSGLDEPVRRFLESSDQTNEMFDDIFHFLDKWLPVFAEGHRH 240
VFDVRHLPNPHWDLELRRFSGLDEPV++FLE+S Q NEMF+DI HFL KWLP FAEGHRH
Sbjct 181 VFDVRHLPNPHWDLELRRFSGLDEPVKQFLEASPQANEMFEDILHFLKKWLPAFAEGHRH 240
Query 241 YMTVSIGCTGGQHRSVYIVDRLKKALEAKWSIQVLHREMKHWS 283
YMT+SIGCTGGQHRSVY+VDRLK+ALEA+WS+QVLHREMKHWS
Sbjct 241 YMTISIGCTGGQHRSVYMVDRLKQALEAEWSVQVLHREMKHWS 283
>A3M295 Nucleotide-binding protein A1S_0588 [Acinetobacter baumannii
(strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755
/ 5377)]
Length=283
Score = 533 bits (1374), Expect = 0.0
Identities = 258/283 (91%), Positives = 273/283 (96%), Gaps = 0/283 (0%)
Query 1 MKRILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIVAKLDHENNLEQLALGVDV 60
MKRILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIVAKLDHENNLEQLALGVDV
Sbjct 1 MKRILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIVAKLDHENNLEQLALGVDV 60
Query 61 RSTRADMQEFDLVFEQLQKHGTVDVIYLTTQDQELIARFSASRRPHPLASRFKSLNECIQ 120
RSTRADMQEFD VFEQLQKHGTVDVIYLTTQDQ+LIARFSASRRPHPLA+RFKSL +CI
Sbjct 61 RSTRADMQEFDHVFEQLQKHGTVDVIYLTTQDQDLIARFSASRRPHPLANRFKSLLQCIH 120
Query 121 EEKQLLLPIQFRSTVHIDTTDKSVHDLKHTLLSKLGQSDKLILILQSFGYKHGIPLDADY 180
EEKQLL+PIQFR+TVHIDTTDKSVHDLKH LLSKLGQSD LI+ILQSFGYKHGIPLDADY
Sbjct 121 EEKQLLIPIQFRATVHIDTTDKSVHDLKHILLSKLGQSDNLIVILQSFGYKHGIPLDADY 180
Query 181 VFDVRHLPNPHWDLELRRFSGLDEPVRRFLESSDQTNEMFDDIFHFLDKWLPVFAEGHRH 240
VFDVRHLPNPHWDLELRRFSGLDEPV++FLE+S Q NEMF+DI HFL KWLP FAEGHRH
Sbjct 181 VFDVRHLPNPHWDLELRRFSGLDEPVKQFLEASPQANEMFEDILHFLKKWLPAFAEGHRH 240
Query 241 YMTVSIGCTGGQHRSVYIVDRLKKALEAKWSIQVLHREMKHWS 283
YMT+SIGCTGGQHRSVY+VDRLK+ALEA+WS+QVLHREMKHWS
Sbjct 241 YMTISIGCTGGQHRSVYMVDRLKQALEAEWSVQVLHREMKHWS 283
>B2HTG6 Nucleotide-binding protein ACICU_00591 [Acinetobacter
baumannii (strain ACICU)]
Length=283
Score = 533 bits (1374), Expect = 0.0
Identities = 258/283 (91%), Positives = 273/283 (96%), Gaps = 0/283 (0%)
Query 1 MKRILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIVAKLDHENNLEQLALGVDV 60
MKRILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIVAKLDHENNLEQLALGVDV
Sbjct 1 MKRILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIVAKLDHENNLEQLALGVDV 60
Query 61 RSTRADMQEFDLVFEQLQKHGTVDVIYLTTQDQELIARFSASRRPHPLASRFKSLNECIQ 120
RSTRADMQEFD VFEQLQKHGTVDVIYLTTQDQ+LIARFSASRRPHPLA+RFKSL +CI
Sbjct 61 RSTRADMQEFDHVFEQLQKHGTVDVIYLTTQDQDLIARFSASRRPHPLANRFKSLLQCIH 120
Query 121 EEKQLLLPIQFRSTVHIDTTDKSVHDLKHTLLSKLGQSDKLILILQSFGYKHGIPLDADY 180
EEKQLL+PIQFR+TVHIDTTDKSVHDLKH LLSKLGQSD LI+ILQSFGYKHGIPLDADY
Sbjct 121 EEKQLLIPIQFRATVHIDTTDKSVHDLKHILLSKLGQSDNLIVILQSFGYKHGIPLDADY 180
Query 181 VFDVRHLPNPHWDLELRRFSGLDEPVRRFLESSDQTNEMFDDIFHFLDKWLPVFAEGHRH 240
VFDVRHLPNPHWDLELRRFSGLDEPV++FLE+S Q NEMF+DI HFL KWLP FAEGHRH
Sbjct 181 VFDVRHLPNPHWDLELRRFSGLDEPVKQFLEASPQANEMFEDILHFLKKWLPAFAEGHRH 240
Query 241 YMTVSIGCTGGQHRSVYIVDRLKKALEAKWSIQVLHREMKHWS 283
YMT+SIGCTGGQHRSVY+VDRLK+ALEA+WS+QVLHREMKHWS
Sbjct 241 YMTISIGCTGGQHRSVYMVDRLKQALEAEWSVQVLHREMKHWS 283
>B0V5P6 Nucleotide-binding protein ABAYE3173 [Acinetobacter baumannii
(strain AYE)]
Length=283
Score = 533 bits (1374), Expect = 0.0
Identities = 258/283 (91%), Positives = 273/283 (96%), Gaps = 0/283 (0%)
Query 1 MKRILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIVAKLDHENNLEQLALGVDV 60
MKRILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIVAKLDHENNLEQLALGVDV
Sbjct 1 MKRILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIVAKLDHENNLEQLALGVDV 60
Query 61 RSTRADMQEFDLVFEQLQKHGTVDVIYLTTQDQELIARFSASRRPHPLASRFKSLNECIQ 120
RSTRADMQEFD VFEQLQKHGTVDVIYLTTQDQ+LIARFSASRRPHPLA+RFKSL +CI
Sbjct 61 RSTRADMQEFDHVFEQLQKHGTVDVIYLTTQDQDLIARFSASRRPHPLANRFKSLLQCIH 120
Query 121 EEKQLLLPIQFRSTVHIDTTDKSVHDLKHTLLSKLGQSDKLILILQSFGYKHGIPLDADY 180
EEKQLL+PIQFR+TVHIDTTDKSVHDLKH LLSKLGQSD LI+ILQSFGYKHGIPLDADY
Sbjct 121 EEKQLLIPIQFRATVHIDTTDKSVHDLKHILLSKLGQSDNLIVILQSFGYKHGIPLDADY 180
Query 181 VFDVRHLPNPHWDLELRRFSGLDEPVRRFLESSDQTNEMFDDIFHFLDKWLPVFAEGHRH 240
VFDVRHLPNPHWDLELRRFSGLDEPV++FLE+S Q NEMF+DI HFL KWLP FAEGHRH
Sbjct 181 VFDVRHLPNPHWDLELRRFSGLDEPVKQFLEASPQANEMFEDILHFLKKWLPAFAEGHRH 240
Query 241 YMTVSIGCTGGQHRSVYIVDRLKKALEAKWSIQVLHREMKHWS 283
YMT+SIGCTGGQHRSVY+VDRLK+ALEA+WS+QVLHREMKHWS
Sbjct 241 YMTISIGCTGGQHRSVYMVDRLKQALEAEWSVQVLHREMKHWS 283
>B0VKK2 Nucleotide-binding protein ABSDF2931 [Acinetobacter baumannii
(strain SDF)]
Length=283
Score = 530 bits (1366), Expect = 0.0
Identities = 257/283 (91%), Positives = 272/283 (96%), Gaps = 0/283 (0%)
Query 1 MKRILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIVAKLDHENNLEQLALGVDV 60
MKRILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIVAKLDHENNLEQLALGVDV
Sbjct 1 MKRILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIVAKLDHENNLEQLALGVDV 60
Query 61 RSTRADMQEFDLVFEQLQKHGTVDVIYLTTQDQELIARFSASRRPHPLASRFKSLNECIQ 120
RSTRADMQEFD VFEQLQKHGTVDVIYLTTQDQ+LIARFSASRRPHPLA+RFKSL +CI
Sbjct 61 RSTRADMQEFDHVFEQLQKHGTVDVIYLTTQDQDLIARFSASRRPHPLANRFKSLLQCIH 120
Query 121 EEKQLLLPIQFRSTVHIDTTDKSVHDLKHTLLSKLGQSDKLILILQSFGYKHGIPLDADY 180
EEKQLL+PIQF +TVHIDTTDKSVHDLKH LLSKLGQSD LI+ILQSFGYKHGIPLDADY
Sbjct 121 EEKQLLIPIQFCATVHIDTTDKSVHDLKHILLSKLGQSDNLIVILQSFGYKHGIPLDADY 180
Query 181 VFDVRHLPNPHWDLELRRFSGLDEPVRRFLESSDQTNEMFDDIFHFLDKWLPVFAEGHRH 240
VFDVRHLPNPHWDLELRRFSGLDEPV++FLE+S Q NEMF+DI HFL KWLP FAEGHRH
Sbjct 181 VFDVRHLPNPHWDLELRRFSGLDEPVKQFLEASPQANEMFEDILHFLKKWLPAFAEGHRH 240
Query 241 YMTVSIGCTGGQHRSVYIVDRLKKALEAKWSIQVLHREMKHWS 283
YMT+SIGCTGGQHRSVY+VDRLK+ALEA+WS+QVLHREMKHWS
Sbjct 241 YMTISIGCTGGQHRSVYMVDRLKQALEAEWSVQVLHREMKHWS 283
>A1U474 Nucleotide-binding protein Maqu_2718 [Marinobacter nauticus
(strain ATCC 700491 / DSM 11845 / VT8)]
Length=294
Score = 267 bits (683), Expect = 1e-92
Identities = 131/286 (46%), Positives = 202/286 (71%), Gaps = 7/286 (2%)
Query 3 RILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIV---AKLDHENNLEQLALGVD 59
+++IV+G+SGSGKS+AL VLEDLG+YCIDNLP+ LL + A + L+++A+ +D
Sbjct 2 KLIIVSGRSGSGKSTALHVLEDLGFYCIDNLPIGLLFPLTREAATQEAPGRLKKMAVSID 61
Query 60 VRSTRADMQEFDLVFEQLQKHGT-VDVIYLTTQDQELIARFSASRRPHPLASRFKSLNEC 118
R+ A++ F+ +++QL++ G +++I+L +Q L+ RF A+RR HPL+ SL E
Sbjct 62 ARNLSAELANFETIYQQLKQTGVELEIIFLDADEQSLLQRFHATRRKHPLSDDKTSLREA 121
Query 119 IQEEKQLLLPIQFRSTVHIDTTDKSVHDLKHTLLSKL-GQSDK-LILILQSFGYKHGIPL 176
I EKQLL P+ + ++++TT S+++L+ + ++ G+ D+ L L+ QSFG+KHG+P+
Sbjct 122 ITNEKQLLEPLSKLADLYVNTTGLSMYELRDMIKQRVAGRKDQELALLFQSFGFKHGVPV 181
Query 177 DADYVFDVRHLPNPHWDLELRRFSGLDEPVRRFLESSDQTNEMFDDIFHFLDKWLPVFAE 236
D+DYVFDVR LPNP+WD LR+ +G+D+PV FLE T +M DD+ FL+ WLP FA+
Sbjct 182 DSDYVFDVRCLPNPYWDTSLRKHTGVDQPVIDFLEREPLTRQMVDDLTGFLNTWLPSFAD 241
Query 237 GHRHYMTVSIGCTGGQHRSVYIVDRLKKALEAKW-SIQVLHREMKH 281
+R YMT+SIGCTGGQHRSVY+ ++L + + ++QV H E+ H
Sbjct 242 SNRSYMTISIGCTGGQHRSVYVCEQLGRYFRDNYRNVQVRHTELPH 287
>Q2SBH8 Nucleotide-binding protein HCH_05324 [Hahella chejuensis
(strain KCTC 2396)]
Length=286
Score = 261 bits (667), Expect = 2e-90
Identities = 130/283 (46%), Positives = 192/283 (68%), Gaps = 6/283 (2%)
Query 3 RILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIVAKLDHENNLE--QLALGVDV 60
+++IV+G+SGSGKS+AL VLED+GYYCIDNLP+ LL + ++ + + QLA+ +D
Sbjct 2 KLIIVSGRSGSGKSTALHVLEDMGYYCIDNLPIGLLSPLTQEVLDQGKTQNQQLAVSIDA 61
Query 61 RSTRADMQEFDLVFEQLQKHGT-VDVIYLTTQDQELIARFSASRRPHPLASRFKSLNECI 119
R+ D+ +F ++ LQ H V++IYL D LI RF A+RR HPL+S+ SL E I
Sbjct 62 RNLYRDLSDFPSIYAALQAHNIDVEIIYLDANDATLIKRFHATRRKHPLSSKSTSLKEAI 121
Query 120 QEEKQLLLPIQFRSTVHIDTTDKSVHDLKHTLLSKL--GQSDKLILILQSFGYKHGIPLD 177
+EKQLL PI + ++IDT+D S++ L+ + ++ ++ +L L+ QSFG+KHG+P D
Sbjct 122 AKEKQLLEPIATLANLYIDTSDLSIYQLRDQVKIRVIGHKTQELALLFQSFGFKHGVPSD 181
Query 178 ADYVFDVRHLPNPHWDLELRRFSGLDEPVRRFLESSDQTNEMFDDIFHFLDKWLPVFAEG 237
+D VFDVR LPNP+WD LR + G D+ + FL+ + +M I FL+ W+P F
Sbjct 182 SDMVFDVRCLPNPYWDTALRGYKGTDQEIIEFLKQHPEPEQMLQHIISFLETWIPHFQNS 241
Query 238 HRHYMTVSIGCTGGQHRSVYIVDRLKKALEAKW-SIQVLHREM 279
+R YMT+SIGCTGGQHRSVYI +RL + + K+ ++QV H+E+
Sbjct 242 NRTYMTISIGCTGGQHRSVYICERLGEHFKKKYDNVQVRHKEL 284
>Q6LMB3 Nucleotide-binding protein PBPRA3258 [Photobacterium profundum
(strain SS9)]
Length=282
Score = 255 bits (652), Expect = 4e-88
Identities = 124/281 (44%), Positives = 191/281 (68%), Gaps = 5/281 (2%)
Query 3 RILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIVAKLDHENNLEQLALGVDVRS 62
++++V+G+SGSGKS AL+VLEDLGYYC+DNLP+ LLP+ ++ + ENN + +A+ +DVR+
Sbjct 2 QLMVVSGRSGSGKSVALRVLEDLGYYCVDNLPVTLLPQFISTV--ENNEQDIAVSIDVRN 59
Query 63 TRADMQEFDLVFEQLQKHGTVDVIYLTTQDQELIARFSASRRPHPLASRFKSLNECIQEE 122
++ L ++VI++ D+EL+ R+S +RR HPL+ SL + IQ E
Sbjct 60 MPSESGVIQKTLNSLDDKLDINVIFIDADDKELVKRYSETRRLHPLSKHDMSLEQAIQSE 119
Query 123 KQLLLPIQFRSTVHIDTTDKSVHDLKHTLLSKL--GQSDKLILILQSFGYKHGIPLDADY 180
++ I+ + + IDTT+KS+HDL T+ +++ +S KLIL+ +SFG+KHG+P DADY
Sbjct 120 SAIVADIKEHADLVIDTTNKSIHDLSETVRARVLGRESRKLILVFESFGFKHGLPTDADY 179
Query 181 VFDVRHLPNPHWDLELRRFSGLDEPVRRFLESSDQTNEMFDDIFHFLDKWLPVFAEGHRH 240
VFDVR LPNPHW EL+ +GLD+ V+ FL + N++ I +F++ WLP+ + +R
Sbjct 180 VFDVRFLPNPHWVPELKPQTGLDQEVKEFLVGHAEVNKLIYQIRNFIETWLPLLEKNNRS 239
Query 241 YMTVSIGCTGGQHRSVYIVDRL-KKALEAKWSIQVLHREMK 280
Y+TV+IGCTGGQHRSVY+ +L L +Q+ HR ++
Sbjct 240 YLTVAIGCTGGQHRSVYVAQQLADHFLHDGQQVQIRHRTLE 280
>Q1QEJ2 Nucleotide-binding protein Pcryo_0127 [Psychrobacter cryohalolentis
(strain ATCC BAA-1226 / DSM 17306 / VKM B-2378
/ K5)]
Length=320
Score = 256 bits (653), Expect = 9e-88
Identities = 134/294 (46%), Positives = 194/294 (66%), Gaps = 15/294 (5%)
Query 4 ILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIVAKLDHENNLEQLALGVDVRST 63
IL+V+G+SGSGK+S L +LEDLG+Y IDNLPL+L+PE KL ++ ++++ALGVD+R+
Sbjct 27 ILVVSGRSGSGKTSVLNILEDLGFYSIDNLPLSLVPEAAQKLVCDSGIKRIALGVDIRTP 86
Query 64 RADMQEFDLVFEQL-QKHG--TVDVIYLTTQDQELIARFSASRRPHPLA--------SRF 112
RAD+ FD + + L Q +G V V+Y+T Q++ L+ARF+A+RR HPL +
Sbjct 87 RADLSNFDAIHDSLKQTYGEEAVTVMYVTAQEETLVARFNATRRIHPLMVLDTKGVENNV 146
Query 113 KSLNECIQEEKQLLLPIQFRSTVHIDTTDKSVHDLKHTLLSKLGQSDKLILILQSFGYKH 172
+L I++E QLL PI + + IDT+ ++H LK L +G +++++ L SFG+K+
Sbjct 147 YNLPAAIEKEIQLLQPIFKHADIKIDTSMLNIHQLKERLRDYVGVDNQIVINLLSFGFKY 206
Query 173 GIPLDADYVFDVRHLPNPHWDLELRRFSGLDEPVRRFLESSDQTNEMFDDIFHFLDKWLP 232
G P+DAD+VFDVR LPNPHW+ LR +GLD V F + EM DI FL++WLP
Sbjct 207 GSPIDADFVFDVRILPNPHWNPTLRSATGLDAEVSAFFADYPEVAEMTGDIATFLNRWLP 266
Query 233 VFAEGHRHYMTVSIGCTGGQHRSVYIV----DRLKKALEAKWSIQVLHREMKHW 282
F +RH +TV+IGCTGG+HRSV+I DRL+ +L ++ HRE W
Sbjct 267 DFLHNNRHTVTVAIGCTGGKHRSVFITKHLQDRLQNSLPEGLTVTAKHREKHRW 320
>A5WHC8 Nucleotide-binding protein PsycPRwf_2129 [Psychrobacter
sp. (strain PRwf-1)]
Length=315
Score = 252 bits (644), Expect = 2e-86
Identities = 125/290 (43%), Positives = 189/290 (65%), Gaps = 11/290 (4%)
Query 4 ILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIVAKLDHENNLEQLALGVDVRST 63
+LIV+G+SGSGK+S L +LEDLGYY IDN+PL+LL + KL + + LALGVD+R+
Sbjct 24 VLIVSGRSGSGKTSVLNILEDLGYYVIDNMPLSLLSDAAHKLTEDGGITNLALGVDIRTL 83
Query 64 RADMQEFDLVFEQL-QKHGT--VDVIYLTTQDQELIARFSASRRPHPLAS----RFKSLN 116
+AD F +++ L +G V ++Y+T Q+ L+ARF+A+RR HPL + K+L
Sbjct 84 KADSASFSAIYDTLLNSYGPDKVRIMYVTAQESVLVARFAATRRVHPLMAVNDYEIKNLP 143
Query 117 ECIQEEKQLLLPIQFRSTVHIDTTDKSVHDLKHTLLSKLGQSDKLILILQSFGYKHGIPL 176
I +E + L PI + + IDT+ ++H LK + +G +++ + + SFG+K+G+P+
Sbjct 144 SAIIKETETLRPISGNADITIDTSQLNIHQLKELVREYVGADNQITVNVLSFGFKYGVPI 203
Query 177 DADYVFDVRHLPNPHWDLELRRFSGLDEPVRRFLESSDQTNEMFDDIFHFLDKWLPVFAE 236
DAD+VFDVR LPNPHW+ +LR +G D V F + Q EM DI+ +LD+WLP F
Sbjct 204 DADFVFDVRILPNPHWEPQLRVKTGKDTEVAAFFANFPQVEEMKQDIYRYLDRWLPEFLH 263
Query 237 GHRHYMTVSIGCTGGQHRSVYIVD----RLKKALEAKWSIQVLHREMKHW 282
+RH +TV++GCTGG+HRSV++ + L ++L + + V HRE HW
Sbjct 264 NNRHTVTVAVGCTGGKHRSVFLAESLYSMLSESLPREIKVMVKHREKAHW 313
>A4XQL9 Nucleotide-binding protein Pmen_0867 [Pseudomonas mendocina
(strain ymp)]
Length=285
Score = 250 bits (638), Expect = 5e-86
Identities = 131/283 (46%), Positives = 193/283 (68%), Gaps = 6/283 (2%)
Query 3 RILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIV--AKLDHENNLEQLALGVDV 60
R++IV+G+SGSGKS+AL VLED G+YCIDNLP LLP++ A L+ E L Q+A+ +D
Sbjct 2 RLIIVSGRSGSGKSTALDVLEDNGFYCIDNLPAGLLPDLAERALLNTEMLLPQVAVSIDA 61
Query 61 RSTRADMQEFDLVFEQL-QKHGTVDVIYLTTQDQELIARFSASRRPHPLASRFKSLNECI 119
R+ ++ ++ F + EQ+ Q++ D++YL D+ L+ RFS +RR HPL +SL E I
Sbjct 62 RNLQSHLRRFPELLEQVRQRNIRCDILYLDADDETLLKRFSETRRRHPLTDENRSLAEAI 121
Query 120 QEEKQLLLPIQFRSTVHIDTTDKSVHDLKHTL-LSKLGQSDK-LILILQSFGYKHGIPLD 177
+E Q+L PI + + IDTT +++ L+ +L L L Q + + +SFG+K G+P+D
Sbjct 122 ADETQVLAPIVDLADLKIDTTHLNLYQLRDSLKLRLLNQPEPGTAFLFESFGFKRGMPVD 181
Query 178 ADYVFDVRHLPNPHWDLELRRFSGLDEPVRRFLESSDQTNEMFDDIFHFLDKWLPVFAEG 237
AD VFD R LPNP+W ELR FSGL +PV +L + + EM+ DI +L+KWLP FA
Sbjct 182 ADLVFDARCLPNPYWKPELRDFSGLQQPVIDYLAAQPEVEEMYQDILAYLEKWLPRFAAS 241
Query 238 HRHYMTVSIGCTGGQHRSVYIVDRLKKALEAKW-SIQVLHREM 279
+R Y+T++IGCTGG HRSVY+ +RL +AL+ ++QV HR++
Sbjct 242 NRAYVTIAIGCTGGHHRSVYLANRLSQALKKPLKNVQVRHRDL 284
>Q4FVG6 Nucleotide-binding protein Psyc_0118 [Psychrobacter arcticus
(strain DSM 17307 / VKM B-2377 / 273-4)]
Length=320
Score = 251 bits (641), Expect = 6e-86
Identities = 133/294 (45%), Positives = 193/294 (66%), Gaps = 15/294 (5%)
Query 4 ILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIVAKLDHENNLEQLALGVDVRST 63
IL+V+G+SGSGK+S L +LEDLG+Y IDNLPL+L+PE V KL ++ ++++ALGVD+R+
Sbjct 27 ILVVSGRSGSGKTSVLNILEDLGFYSIDNLPLSLVPEAVQKLVCDSGIKRIALGVDIRTP 86
Query 64 RADMQEFDLVFEQL-QKHG--TVDVIYLTTQDQELIARFSASRRPHPLA--------SRF 112
RAD+ F + + L Q +G V V+Y+T Q++ L+ARF+A+RR HPL +
Sbjct 87 RADLSNFAAIHDSLKQAYGEEAVTVMYVTAQEETLVARFNATRRIHPLMVLDTKGVENTA 146
Query 113 KSLNECIQEEKQLLLPIQFRSTVHIDTTDKSVHDLKHTLLSKLGQSDKLILILQSFGYKH 172
+L I++E QLL PI + + IDT+ ++H LK L +G +++++ L SFG+K+
Sbjct 147 YNLPAAIEKEIQLLQPICKYADIKIDTSMLNIHQLKERLRDYVGVDNQIVINLLSFGFKY 206
Query 173 GIPLDADYVFDVRHLPNPHWDLELRRFSGLDEPVRRFLESSDQTNEMFDDIFHFLDKWLP 232
G P+DAD+VFDVR LPNPHW+ LR +GLD V F + EM DI FL++WLP
Sbjct 207 GSPIDADFVFDVRILPNPHWNPTLRAATGLDAEVGEFFADYPEVTEMTGDIATFLNRWLP 266
Query 233 VFAEGHRHYMTVSIGCTGGQHRSVYIV----DRLKKALEAKWSIQVLHREMKHW 282
F +RH +TV+IGCTGG+HRSV+I D L+ +L ++ HRE W
Sbjct 267 DFLHNNRHTVTVAIGCTGGKHRSVFITKHLQDSLQNSLPEGLTVTAKHREKHRW 320
>P17163 RNase adapter protein RapZ [Klebsiella oxytoca]
Length=284
Score = 237 bits (605), Expect = 5e-81
Identities = 120/280 (43%), Positives = 183/280 (65%), Gaps = 5/280 (2%)
Query 4 ILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIVAKLDHENNLEQLALGVDVRST 63
++IV+G+SGSGKS AL+ LED+G+YC+DNLP+ LLPE+ L N A+ +DVR+
Sbjct 3 LMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPELARSLADRNI--SAAVSIDVRNM 60
Query 64 RADMQEFDLVFEQLQKHGTVDVIYLTTQDQELIARFSASRRPHPLASRFKSLNECIQEEK 123
+ F+ + L + +++L LI R+S +RR HPL+S+ SL I EE
Sbjct 61 PESPEIFEQAMKNLPAEFSPQLLFLDADRNTLIRRYSDTRRLHPLSSKNLSLESAIDEES 120
Query 124 QLLLPIQFRSTVHIDTTDKSVHDLKHTLLSKL-GQSDK-LILILQSFGYKHGIPLDADYV 181
LL P++ R+ + +DT++ SVH+L L ++L G+ ++ L ++ +SFG+KHGIP+DADYV
Sbjct 121 DLLEPLRSRADLIVDTSEMSVHELAEMLRTRLLGKRERELTMVFESFGFKHGIPIDADYV 180
Query 182 FDVRHLPNPHWDLELRRFSGLDEPVRRFLESSDQTNEMFDDIFHFLDKWLPVFAEGHRHY 241
FDVR LPNPHWD +LR +GLD+PV FL+ + + +L+ WLP+ +R Y
Sbjct 181 FDVRFLPNPHWDPKLRPMTGLDKPVAAFLDRHTEVHNFIYQTRSYLELWLPMLETNNRSY 240
Query 242 MTVSIGCTGGQHRSVYIVDRLKKALEAKW-SIQVLHREMK 280
+TV+IGCTGG+HRSVYI ++L ++ ++Q HR ++
Sbjct 241 LTVAIGCTGGKHRSVYIAEQLADYFRSRGKNVQSRHRTLE 280
>Q9ZA87 RNase adapter protein RapZ [Proteus mirabilis (strain
HI4320)]
Length=284
Score = 234 bits (598), Expect = 6e-80
Identities = 120/280 (43%), Positives = 183/280 (65%), Gaps = 4/280 (1%)
Query 4 ILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIVAKLDHENNLEQLALGVDVRST 63
++IV+G+SGSGKS AL+ LED+G+YC+DNLP+ LLPE+ AK E + A+ +DVR+
Sbjct 3 LMIVSGRSGSGKSVALRALEDMGFYCVDNLPVDLLPEL-AKTLAERDAAAAAVSIDVRNM 61
Query 64 RADMQEFDLVFEQLQKHGTVDVIYLTTQDQELIARFSASRRPHPLASRFKSLNECIQEEK 123
+ F+ E L + +++L LI R+S +RR HPL+++ SL I E
Sbjct 62 PESPEIFEKALESLPAEYSPQLLFLDADRNTLIRRYSDTRRLHPLSTKNLSLEMAIDTES 121
Query 124 QLLLPIQFRSTVHIDTTDKSVHDLKHTLLSKL-GQSDK-LILILQSFGYKHGIPLDADYV 181
LL P++ R+ + IDT++ SVH+L L ++L G+ ++ L ++ +SFG+KHGIP+DADYV
Sbjct 122 DLLEPLRSRADLIIDTSEMSVHELAEMLRTRLLGKRERELTMVFESFGFKHGIPIDADYV 181
Query 182 FDVRHLPNPHWDLELRRFSGLDEPVRRFLESSDQTNEMFDDIFHFLDKWLPVFAEGHRHY 241
FDVR LPNPHWD +LR +GLD PV FL+ + + +L+ WLP+ +R Y
Sbjct 182 FDVRFLPNPHWDPKLRPMTGLDRPVAAFLDRHTEVHNFIYQTRSYLELWLPMLETNNRSY 241
Query 242 MTVSIGCTGGQHRSVYIVDRLKKALEAKW-SIQVLHREMK 280
+TV+IGCTGG+HRSVY+ ++L ++ ++Q HR ++
Sbjct 242 LTVAIGCTGGKHRSVYVAEQLADYFRSRGKNVQSRHRTLE 281
>P0A894 RNase adapter protein RapZ [Escherichia coli (strain K12)]
Length=284
Score = 231 bits (590), Expect = 9e-79
Identities = 119/281 (42%), Positives = 184/281 (65%), Gaps = 7/281 (2%)
Query 4 ILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIVAKL-DHENNLEQLALGVDVRS 62
++IV+G+SGSGKS AL+ LED+G+YC+DNLP+ LLP++ L D E + A+ +DVR+
Sbjct 3 LMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPDLARTLADREISA---AVSIDVRN 59
Query 63 TRADMQEFDLVFEQLQKHGTVDVIYLTTQDQELIARFSASRRPHPLASRFKSLNECIQEE 122
+ F+ L + +++L LI R+S +RR HPL+S+ SL I +E
Sbjct 60 MPESPEIFEQAMSNLPDAFSPQLLFLDADRNTLIRRYSDTRRLHPLSSKNLSLESAIDKE 119
Query 123 KQLLLPIQFRSTVHIDTTDKSVHDLKHTLLSKL-GQSDK-LILILQSFGYKHGIPLDADY 180
LL P++ R+ + +DT++ SVH+L L ++L G+ ++ L ++ +SFG+KHGIP+DADY
Sbjct 120 SDLLEPLRSRADLIVDTSEMSVHELAEMLRTRLLGKRERELTMVFESFGFKHGIPIDADY 179
Query 181 VFDVRHLPNPHWDLELRRFSGLDEPVRRFLESSDQTNEMFDDIFHFLDKWLPVFAEGHRH 240
VFDVR LPNPHWD +LR +GLD+PV FL+ + + +L+ WLP+ +R
Sbjct 180 VFDVRFLPNPHWDPKLRPMTGLDKPVAAFLDRHTEVHNFIYQTRSYLELWLPMLETNNRS 239
Query 241 YMTVSIGCTGGQHRSVYIVDRLKKALEAKW-SIQVLHREMK 280
Y+TV+IGCTGG+HRSVYI ++L ++ ++Q HR ++
Sbjct 240 YLTVAIGCTGGKHRSVYIAEQLADYFRSRGKNVQSRHRTLE 280
>Q9S0K9 Nucleotide-binding protein in ptsN-ptsO intergenic region
[Shewanella violacea]
Length=282
Score = 230 bits (587), Expect = 3e-78
Identities = 121/280 (43%), Positives = 181/280 (65%), Gaps = 5/280 (2%)
Query 3 RILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIVAKLDHENNLEQLALGVDVRS 62
++++V+G+SGSGKS L+VLEDLGYYC+DNLPL L+ ++ +L +L +A+ VDVR+
Sbjct 2 KLVMVSGRSGSGKSVVLRVLEDLGYYCVDNLPLPLMDTLLEQLKGSTDL--VAISVDVRN 59
Query 63 TRADMQEFDLVFEQLQKHGTVDVIYLTTQDQELIARFSASRRPHPLASRFKSLNECIQEE 122
+EF L K + +L + D+ L+ R+S +RR HPL+ SL E I+ E
Sbjct 60 MPEQDKEFLKQLANLPKGTELLSFFLDSSDEVLLKRYSETRRLHPLSRTKTSLKEAIEHE 119
Query 123 KQLLLPIQFRSTVHIDTTDKSVHDLKHTLLS-KLGQSDK-LILILQSFGYKHGIPLDADY 180
++LL P+ +IDT++ +++DL + LG DK L++ +SFG+K+G+P++AD+
Sbjct 120 RELLEPVSKMVDHYIDTSNLNIYDLSDKIREILLGSVDKELVINFESFGFKYGMPVEADF 179
Query 181 VFDVRHLPNPHWDLELRRFSGLDEPVRRFLESSDQTNEMFDDIFHFLDKWLPVFAEGHRH 240
+FDVR LPNPHW+ ELR +GLDEPV+ FL N+ I + L WLP +R
Sbjct 180 MFDVRFLPNPHWEPELRPMTGLDEPVQLFLSQQPTVNKFIWQIENLLATWLPHLERNNRS 239
Query 241 YMTVSIGCTGGQHRSVYIVDRLKKAL-EAKWSIQVLHREM 279
Y+T++IGCTGGQHRSVY+ ++L K +K IQ HRE+
Sbjct 240 YLTIAIGCTGGQHRSVYVTEQLAKLFANSKHKIQARHREL 279
>Q9KIQ6 Nucleotide-binding protein VIBHAR_03667 [Vibrio campbellii
(strain ATCC BAA-1116)]
Length=287
Score = 227 bits (578), Expect = 7e-77
Identities = 109/283 (39%), Positives = 187/283 (66%), Gaps = 7/283 (2%)
Query 3 RILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIVAKLDHENNLEQLALGVDVRS 62
R+++V+G SG+GKS AL+VLEDLGYYC+DNLP+ LL V + + +A+ +D+R+
Sbjct 2 RLIVVSGHSGAGKSVALRVLEDLGYYCVDNLPVNLLDAFVQSVSESK--QNVAVSIDIRN 59
Query 63 TRADMQEFDLVFEQLQKHGTVDVIYLTTQDQELIARFSASRRPHPLA--SRFKSLNECIQ 120
++E + E+L+ V V++L + L+ R+S +RR HPL+ S+ SL++ I+
Sbjct 60 IPKKLKELNTTLEKLKAELDVTVLFLDANKETLLTRYSETRRIHPLSLDSQSLSLDQAIE 119
Query 121 EEKQLLLPIQFRSTVHIDTTDKSVHDLKHTLLSKLGQSDK--LILILQSFGYKHGIPLDA 178
E+++L+P++ + + ++++ +S+HDL T+ ++ ++ L+++ +SFG+K+G+P DA
Sbjct 120 LEQEILMPLKAHADLVLNSSGQSLHDLSETVRMRVEGRERKDLVMVFESFGFKYGLPSDA 179
Query 179 DYVFDVRHLPNPHWDLELRRFSGLDEPVRRFLESSDQTNEMFDDIFHFLDKWLPVFAEGH 238
DYVFDVR LPNPHW+ LR +GLD P+ FLE ++ I F++ WLP+ + +
Sbjct 180 DYVFDVRFLPNPHWEPALRPLTGLDGPIGAFLEQHQSVLDLKYQIESFIETWLPLLEKNN 239
Query 239 RHYMTVSIGCTGGQHRSVYIVDRLKKALEAK-WSIQVLHREMK 280
R Y+TV+IGCTGG+HRSVY+ ++ + K +Q+ H ++
Sbjct 240 RSYLTVAIGCTGGKHRSVYLTQKIGEFFADKGHQVQIRHTSLE 282
>O06973 Nucleotide-binding protein YvcJ [Bacillus subtilis (strain
168)]
Length=295
Score = 177 bits (448), Expect = 3e-57
Identities = 98/286 (34%), Positives = 167/286 (58%), Gaps = 13/286 (5%)
Query 3 RILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIVAKLDHENN-LEQLALGVDVR 61
+++I+TG SG+GK+ A+Q EDLGY+C+DNLP +LLP+ + + N+ + ++AL +D+R
Sbjct 10 QLVIITGMSGAGKTVAIQSFEDLGYFCVDNLPPSLLPKFLELMKESNSKMSKVALVMDLR 69
Query 62 STRADMQEFDLVFEQLQKHG-----TVDVIYLTTQDQELIARFSASRRPHPLASRFKSLN 116
+ FD + E L + T +++L +D L+ R+ +RR HPLA+ L
Sbjct 70 GR----EFFDRLIEALDEMAENPWITPRILFLDAKDSILVTRYKETRRSHPLAATGLPL- 124
Query 117 ECIQEEKQLLLPIQFRSTVHIDTTDKSVHDLKHTLLSKLG--QSDKLILILQSFGYKHGI 174
E I E++LL ++ RS + DT+D DL+ ++ Q + + + SFG+K+GI
Sbjct 125 EGIALERELLEELKGRSQIIYDTSDMKPRDLREKIVKHFATNQGETFTVNVMSFGFKYGI 184
Query 175 PLDADYVFDVRHLPNPHWDLELRRFSGLDEPVRRFLESSDQTNEMFDDIFHFLDKWLPVF 234
P+DAD VFDVR LPNP++ +R +G D+ V ++ ++T + + + L LP +
Sbjct 185 PIDADLVFDVRFLPNPYYIESMRPLTGKDKEVSSYVMKWNETQKFNEKLIDLLSFMLPSY 244
Query 235 AEGHRHYMTVSIGCTGGQHRSVYIVDRLKKALEAKWSIQVLHREMK 280
+ + ++IGCTGGQHRSV + + L + + V HR+++
Sbjct 245 KREGKSQVVIAIGCTGGQHRSVTLAENLADYFKKDYYTHVTHRDIE 290
>P96769 Nucleotide-binding protein HI1146 homolog [Aggregatibacter
actinomycetemcomitans]
Length=110
Score = 94.4 bits (233), Expect = 1e-27
Identities = 52/103 (50%), Positives = 67/103 (65%), Gaps = 2/103 (2%)
Query 106 HPLASRFKSLNECIQEEKQLLLPIQFRSTVHIDTTDKSVHDLKHTLLSKL-GQSDK-LIL 163
HPL SL I+EE L P+ ++ + IDT S H+L L L G SDK L +
Sbjct 5 HPLYRTDLSLEAAIEEEANRLDPLVQQANLLIDTAALSTHELAERLREFLSGHSDKELKI 64
Query 164 ILQSFGYKHGIPLDADYVFDVRHLPNPHWDLELRRFSGLDEPV 206
+++SFG+K+GIPLDADYVFDVR LPNPHW+ LR +GLD+ V
Sbjct 65 VVESFGFKYGIPLDADYVFDVRFLPNPHWNQGLRPLTGLDDEV 107
>P43520 Nucleotide-binding protein in fmt 3'region [Thermus thermophilus]
Length=110
Score = 67.8 bits (164), Expect = 1e-17
Identities = 40/108 (37%), Positives = 65/108 (60%), Gaps = 6/108 (6%)
Query 3 RILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIVAKLDHENNLEQLALGVDVRS 62
R L++TG SG+GK++A LEDLGY+ +DNLP L P ++ + L ++ + VD R+
Sbjct 2 RFLVLTGLSGAGKTTARGFLEDLGYFMVDNLPPRLWPPLLQEA-AARGLARVGVVVDARA 60
Query 63 TRADMQEFDLVFEQLQKHGTVDVIYLTTQDQELIARFSASRRPHPLAS 110
A Q+ + V E L+ V+YL + + L+ R++ +RR HPL +
Sbjct 61 L-AFFQDLEEVLEALRP----TVVYLEARPEVLLRRYNLTRRVHPLGA 103
>F4JZN6 3-dehydrosphinganine reductase TSC10B [Arabidopsis thaliana]
Length=331
Score = 37.4 bits (85), Expect = 4e-06
Identities = 22/85 (26%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query 2 KRILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIVAKLDHENNLEQLALGVDVR 61
+ + I G SG G + A + + + +++L KL QLA GV+V
Sbjct 38 RHVFITGGSSGIGLALAHRAVSE-------GAKVSILARSTEKLAEAKRSIQLATGVEVA 90
Query 62 STRADMQEFDLVFEQLQKHGTVDVI 86
+ AD++++D V + + + G +DV+
Sbjct 91 TFSADVRDYDAVSKAIDESGPIDVL 115
>F4KAF2 Protein MICRORCHIDIA 4 [Arabidopsis thaliana]
Length=800
Score = 36.2 bits (82), Expect = 1e-05
Identities = 29/118 (25%), Positives = 53/118 (45%), Gaps = 9/118 (8%)
Query 46 DHENNLEQLALGVDVRSTRADMQEFDLVFEQLQKHGTVDVIYLTTQDQELIARFSASRRP 105
D E N+E + S A +E F ++KHGT +IY +D E + P
Sbjct 315 DWEKNVETVVQW----SPYATEEELLCQFNLMKKHGTRIIIYNLWEDDEGMLELDFDTDP 370
Query 106 HPLASRFKSLNECIQEEKQLLLPIQFRSTVHIDTTDKSVHDLKHTLLSKLGQSDKLIL 163
H + + + +N +++K +++ QF ++ H T S+ L K+ ++IL
Sbjct 371 HDI--QLRGVN---RDDKNIVMASQFPNSRHYLTYKHSLRSYASILYLKISHEFRIIL 423
Score = 17.7 bits (34), Expect = 7.9
Identities = 11/29 (38%), Positives = 15/29 (52%), Gaps = 4/29 (14%)
Query 90 TQDQELIARF----SASRRPHPLASRFKS 114
T+D+E F SAS R + S FK+
Sbjct 567 TEDRESSPEFDPKGSASSRKRTVPSSFKT 595
Lambda K H a alpha
0.324 0.139 0.421 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1415528
Database: 37afb9528540f9aea2a023011ae94f72.SwissProt.fasta
Posted date: May 12, 2024 8:34 PM
Number of letters in database: 7,150
Number of sequences in database: 24
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
