BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: b990d211f047a5f9619758abd523fefc.TrEMBL.fasta
22 sequences; 8,547 total letters
Query= ACIAD3069
Length=464
Score E
Sequences producing significant alignments: (Bits) Value
A0A7G2SGR8 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [A... 936 0.0
A0A1P8EJP0 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [A... 697 0.0
A0A0M1I6E0 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [A... 697 0.0
A0A427LP99 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [A... 696 0.0
N9BXA2 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [Acine... 694 0.0
A0A3A8EJS7 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [A... 685 0.0
N9C6X6 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [Acine... 685 0.0
A0A427PQS5 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [A... 685 0.0
A0A3F3L216 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [A... 684 0.0
L9LNZ1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [Acine... 682 0.0
A0A2T7FPD6 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [A... 682 0.0
A0A5Q0RN90 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [A... 682 0.0
A0A8B6XAI0 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [D... 304 6e-102
F5CA72 23S rRNA m(5)U 1939 methyltransferase [Streptococcus phi-m... 130 2e-36
A2CLM0 tRNA/tmRNA (uracil-C(5))-methyltransferase [Candidatus End... 84.7 5e-21
A8BSM0 tRNA (Uridine(54)-C5)-methyltransferase TrmA [Arcobacter n... 76.6 2e-19
Q6TWA5 OssF [Streptococcus thermophilus] 59.3 3e-13
A0A193DR63 Arsenite methyltransferase [Arsenicibacter rosenii] 56.2 8e-12
A8BSJ6 tRNA (Uridine(54)-C5)-methyltransferase TrmA [Aliarcobacte... 46.6 4e-10
Q9L546 AknG [Streptomyces galilaeus] 47.4 5e-09
A0A0B4VG18 Coclaurine N-methyltransferase [Sinopodophyllum hexand... 46.2 2e-08
W0LMV8 Arsenite methyltransferase [uncultured bacterium] 44.3 5e-08
>A0A7G2SGR8 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
[Acinetobacter sp]
Length=463
Score = 936 bits (2419), Expect = 0.0
Identities = 462/463 (99%), Positives = 463/463 (100%), Gaps = 0/463 (0%)
Query 1 LKKHASSRSKSATVYTFRIESFSHEGRGIAHFGEFAEHPQTKHGKKVFVRYALPGEVVRA 60
+KKHASSRSKSATVYTFRIESFSHEGRGIAHFGEFAEHPQTKHGKKVFVRYALPGEVVRA
Sbjct 1 MKKHASSRSKSATVYTFRIESFSHEGRGIAHFGEFAEHPQTKHGKKVFVRYALPGEVVRA 60
Query 61 KITHETKRFEEGELIEILDQPSIDRIVPVCPHFGVCGGCSMQHITPNQQIQIKQHVLASH 120
KITHETKRFEEGELIEILDQPSIDRIVPVCPHFGVCGGCSMQHITPNQQIQIKQHVLASH
Sbjct 61 KITHETKRFEEGELIEILDQPSIDRIVPVCPHFGVCGGCSMQHITPNQQIQIKQHVLASH 120
Query 121 LQHFAGLTVNEWLTPVRSLRADYRRRARVGVRYIPAKQKLIMGFREHGSNRLTPIQSCAV 180
LQHFAGLTVNEWLTPVRSLRADYRRRARVGVRYIPAKQKLIMGFREHGSNRLTPIQSCAV
Sbjct 121 LQHFAGLTVNEWLTPVRSLRADYRRRARVGVRYIPAKQKLIMGFREHGSNRLTPIQSCAV 180
Query 181 LDQRLSQALPELYDVLNRLVAKAEIGHIELAMGDDEVSLLVRHLNTLPDSDITQLCDYAQ 240
LDQRLSQALPELYDVLNRLVAKAEIGHIELAMGDDEVSLLVRHLNTLPDSDITQLCDYAQ
Sbjct 181 LDQRLSQALPELYDVLNRLVAKAEIGHIELAMGDDEVSLLVRHLNTLPDSDITQLCDYAQ 240
Query 241 HKNWQLYLQAKGSDSLKRVDRSGAEMRLHYAVPAFNLNFAFSPLDFTQVNATVNQQMLKL 300
HKNWQLYLQAKGSDSLKRVDRSGAEMRLHYAVPAFNLNFAFSPLDFTQVNATVNQQMLKL
Sbjct 241 HKNWQLYLQAKGSDSLKRVDRSGAEMRLHYAVPAFNLNFAFSPLDFTQVNATVNQQMLKL 300
Query 301 ACDLLKLQKGEHVLDLFCGLGNFSLPLARCVGDTGRVVGVEGSEEMVQRAFENAAQNALH 360
ACDLLKLQKGEHVLDLFCGLGNFSLPLARCVGDTGRVVGVEGSEEMVQRAFENAAQNALH
Sbjct 301 ACDLLKLQKGEHVLDLFCGLGNFSLPLARCVGDTGRVVGVEGSEEMVQRAFENAAQNALH 360
Query 361 NVEFYSQDLTKDFSHHSWANQGFDALLIDPPRSGAFEIMHYIANFEAKRIVYVSCNPATL 420
NVEFYSQDLTKDFSHHSWANQGFDALLIDPPRSGAFEIMHYIANFEAKRIVYVSCNPATL
Sbjct 361 NVEFYSQDLTKDFSHHSWANQGFDALLIDPPRSGAFEIMHYIANFEAKRIVYVSCNPATL 420
Query 421 ARDAGVLAQHGYQLKKVGVMDMFTHTEHVESIALFEKIQEIND 463
ARDAGVLAQHGYQLKKVGVMDMFTHTEHVESIALFEKIQEIND
Sbjct 421 ARDAGVLAQHGYQLKKVGVMDMFTHTEHVESIALFEKIQEIND 463
>A0A1P8EJP0 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
[Acinetobacter soli]
Length=463
Score = 697 bits (1799), Expect = 0.0
Identities = 341/463 (74%), Positives = 386/463 (83%), Gaps = 0/463 (0%)
Query 1 LKKHASSRSKSATVYTFRIESFSHEGRGIAHFGEFAEHPQTKHGKKVFVRYALPGEVVRA 60
+KK A SRS S T YTF++ESFSHEGRGIAHFG+ +HP KHGKK F+RYALPGE V A
Sbjct 1 MKKQAPSRSPSVTRYTFQVESFSHEGRGIAHFGQSNDHPVDKHGKKAFIRYALPGETVLA 60
Query 61 KITHETKRFEEGELIEILDQPSIDRIVPVCPHFGVCGGCSMQHITPNQQIQIKQHVLASH 120
KITH TKRFEEGE++EIL+ S R+ P+CPH+GVCGGCSMQHI ++QI+IKQ VL SH
Sbjct 61 KITHATKRFEEGEVLEILEDKSPLRVDPICPHYGVCGGCSMQHIAASEQIKIKQDVLKSH 120
Query 121 LQHFAGLTVNEWLTPVRSLRADYRRRARVGVRYIPAKQKLIMGFREHGSNRLTPIQSCAV 180
LQHFAGL V EWL P+RS R DYRRRAR+GVRYI AK +L+MGFREH SNRLTPIQ C V
Sbjct 121 LQHFAGLDVQEWLAPIRSDRDDYRRRARIGVRYIAAKDQLVMGFREHASNRLTPIQQCPV 180
Query 181 LDQRLSQALPELYDVLNRLVAKAEIGHIELAMGDDEVSLLVRHLNTLPDSDITQLCDYAQ 240
LDQ LS ALP+L ++ L AKAEIGH+ELAMGD +++L+VRHL L +D L + Q
Sbjct 181 LDQALSSALPKLNQLIQSLSAKAEIGHLELAMGDQDIALVVRHLGALGKTDRQALLAFCQ 240
Query 241 HKNWQLYLQAKGSDSLKRVDRSGAEMRLHYAVPAFNLNFAFSPLDFTQVNATVNQQMLKL 300
KNWQLY+ A S+ LKR+D A MRL YA+P FNLNF F+P DFTQVNA VN+QM+ L
Sbjct 241 QKNWQLYVHAGRSEQLKRLDEPQAAMRLSYALPEFNLNFNFAPSDFTQVNAGVNRQMIAL 300
Query 301 ACDLLKLQKGEHVLDLFCGLGNFSLPLARCVGDTGRVVGVEGSEEMVQRAFENAAQNALH 360
AC+LL L+KGE VLDLFCGLGNFSLP+A+CVG TG VVGVEGS++MVQRA ENAA NA+
Sbjct 301 ACNLLDLKKGERVLDLFCGLGNFSLPMAQCVGQTGHVVGVEGSDKMVQRAHENAALNAIQ 360
Query 361 NVEFYSQDLTKDFSHHSWANQGFDALLIDPPRSGAFEIMHYIANFEAKRIVYVSCNPATL 420
VEF+SQDLTKDFSHHSWANQGFDALLIDPPRSGA EIM YI+NFEAKRIVYVSCNPATL
Sbjct 361 QVEFFSQDLTKDFSHHSWANQGFDALLIDPPRSGALEIMQYISNFEAKRIVYVSCNPATL 420
Query 421 ARDAGVLAQHGYQLKKVGVMDMFTHTEHVESIALFEKIQEIND 463
ARDAGVL Q GYQLKKVGVMDMFTHTEHVESIALFEKIQEIND
Sbjct 421 ARDAGVLVQKGYQLKKVGVMDMFTHTEHVESIALFEKIQEIND 463
>A0A0M1I6E0 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
[Acinetobacter sp. C15]
Length=463
Score = 697 bits (1799), Expect = 0.0
Identities = 342/463 (74%), Positives = 385/463 (83%), Gaps = 0/463 (0%)
Query 1 LKKHASSRSKSATVYTFRIESFSHEGRGIAHFGEFAEHPQTKHGKKVFVRYALPGEVVRA 60
+KK A SRS S T YTF++ESFSHEGRGIAHFG+ +HP KHGKK F+RYALPGE V A
Sbjct 1 MKKQAPSRSSSVTRYTFQVESFSHEGRGIAHFGQSNDHPVDKHGKKAFIRYALPGETVLA 60
Query 61 KITHETKRFEEGELIEILDQPSIDRIVPVCPHFGVCGGCSMQHITPNQQIQIKQHVLASH 120
KITH TKRFEEGE++EIL+ S R+ P+CPH+GVCGGCSMQHI +QI+IKQ VL SH
Sbjct 61 KITHATKRFEEGEVLEILEGKSSLRVDPICPHYGVCGGCSMQHIATLEQIKIKQDVLKSH 120
Query 121 LQHFAGLTVNEWLTPVRSLRADYRRRARVGVRYIPAKQKLIMGFREHGSNRLTPIQSCAV 180
LQHFAGL V EWL P+RS R DYRRRAR+GVRYI AK +L+MGFREH SNRLTPIQ C V
Sbjct 121 LQHFAGLDVQEWLAPIRSDRDDYRRRARIGVRYIAAKDQLVMGFREHASNRLTPIQQCPV 180
Query 181 LDQRLSQALPELYDVLNRLVAKAEIGHIELAMGDDEVSLLVRHLNTLPDSDITQLCDYAQ 240
LDQ LS ALPEL ++ L AKAEIGH+ELAMGD +++L+VRHL L +D L + Q
Sbjct 181 LDQALSSALPELNQLIQSLSAKAEIGHLELAMGDQDIALVVRHLGALGKADRQALLAFCQ 240
Query 241 HKNWQLYLQAKGSDSLKRVDRSGAEMRLHYAVPAFNLNFAFSPLDFTQVNATVNQQMLKL 300
KNWQLY+ A S+ LKR+D A MRL YA+P FNLNF F+P DFTQVNA VN+QM+ L
Sbjct 241 QKNWQLYVHAGRSEQLKRLDEPQAAMRLSYALPEFNLNFNFAPSDFTQVNAGVNRQMIAL 300
Query 301 ACDLLKLQKGEHVLDLFCGLGNFSLPLARCVGDTGRVVGVEGSEEMVQRAFENAAQNALH 360
AC+LL L+KGE VLDLFCGLGNFSLP+A+CVG TG VVGVEGS++MVQRA ENAA NA+
Sbjct 301 ACNLLDLKKGERVLDLFCGLGNFSLPMAQCVGQTGHVVGVEGSDKMVQRAHENAALNAIQ 360
Query 361 NVEFYSQDLTKDFSHHSWANQGFDALLIDPPRSGAFEIMHYIANFEAKRIVYVSCNPATL 420
VEF+SQDLTKDFSHHSWANQGFDALLIDPPRSGA EIM YI+NFEAKRIVYVSCNPATL
Sbjct 361 QVEFFSQDLTKDFSHHSWANQGFDALLIDPPRSGALEIMQYISNFEAKRIVYVSCNPATL 420
Query 421 ARDAGVLAQHGYQLKKVGVMDMFTHTEHVESIALFEKIQEIND 463
ARDAGVL Q GYQLKKVGVMDMFTHTEHVESIALFEKIQEIND
Sbjct 421 ARDAGVLVQKGYQLKKVGVMDMFTHTEHVESIALFEKIQEIND 463
>A0A427LP99 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
[Acinetobacter soli]
Length=463
Score = 696 bits (1796), Expect = 0.0
Identities = 341/463 (74%), Positives = 385/463 (83%), Gaps = 0/463 (0%)
Query 1 LKKHASSRSKSATVYTFRIESFSHEGRGIAHFGEFAEHPQTKHGKKVFVRYALPGEVVRA 60
+KK A SRS S T YTF++ESFSHEGRGIAHFG+ +HP KHGKK F+RYALPGE V A
Sbjct 1 MKKQAPSRSPSVTRYTFQVESFSHEGRGIAHFGQSNDHPVDKHGKKAFIRYALPGETVLA 60
Query 61 KITHETKRFEEGELIEILDQPSIDRIVPVCPHFGVCGGCSMQHITPNQQIQIKQHVLASH 120
KITH TKRFEEGE++EIL+ S R+ P+CPH+GVCGGCSMQHI ++QI+IKQ VL SH
Sbjct 61 KITHATKRFEEGEVLEILEGKSSLRVDPICPHYGVCGGCSMQHIATSEQIKIKQDVLKSH 120
Query 121 LQHFAGLTVNEWLTPVRSLRADYRRRARVGVRYIPAKQKLIMGFREHGSNRLTPIQSCAV 180
LQHFAGL V EWL P+RS R DYRRRAR+GVRYI AK +L+MGFREH SNRLTPIQ C V
Sbjct 121 LQHFAGLDVQEWLAPIRSDRDDYRRRARIGVRYIAAKDQLVMGFREHASNRLTPIQQCPV 180
Query 181 LDQRLSQALPELYDVLNRLVAKAEIGHIELAMGDDEVSLLVRHLNTLPDSDITQLCDYAQ 240
LDQ LS ALPEL ++ L AKAEIGH+ELAMGD +++L+VRHL L +D L + Q
Sbjct 181 LDQALSSALPELNQLIQSLSAKAEIGHLELAMGDQDIALVVRHLGALGKADRQALLTFCQ 240
Query 241 HKNWQLYLQAKGSDSLKRVDRSGAEMRLHYAVPAFNLNFAFSPLDFTQVNATVNQQMLKL 300
KNWQLY+ A S+ LKR+D A MRL YA+P FNLNF F+P DFTQVNA VN+QM+ L
Sbjct 241 QKNWQLYVHAGRSEQLKRLDDPQAAMRLSYALPEFNLNFNFAPSDFTQVNAGVNRQMIAL 300
Query 301 ACDLLKLQKGEHVLDLFCGLGNFSLPLARCVGDTGRVVGVEGSEEMVQRAFENAAQNALH 360
AC+LL L+KGE VLDLFCGLGNFSLP+A+CVG TG VVGVEGS++MVQRA ENAA N +
Sbjct 301 ACNLLDLKKGERVLDLFCGLGNFSLPMAQCVGQTGHVVGVEGSDKMVQRAHENAALNKIQ 360
Query 361 NVEFYSQDLTKDFSHHSWANQGFDALLIDPPRSGAFEIMHYIANFEAKRIVYVSCNPATL 420
VEF+SQDLTKDFSHHSWANQGFDALLIDPPRSGA EIM YI+NFEAKRIVYVSCNPATL
Sbjct 361 QVEFFSQDLTKDFSHHSWANQGFDALLIDPPRSGALEIMQYISNFEAKRIVYVSCNPATL 420
Query 421 ARDAGVLAQHGYQLKKVGVMDMFTHTEHVESIALFEKIQEIND 463
ARDAGVL Q GYQLKKVGVMDMFTHTEHVESIALFEKIQEIND
Sbjct 421 ARDAGVLVQKGYQLKKVGVMDMFTHTEHVESIALFEKIQEIND 463
>N9BXA2 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [Acinetobacter
soli NIPH 2899]
Length=463
Score = 694 bits (1790), Expect = 0.0
Identities = 340/463 (73%), Positives = 384/463 (83%), Gaps = 0/463 (0%)
Query 1 LKKHASSRSKSATVYTFRIESFSHEGRGIAHFGEFAEHPQTKHGKKVFVRYALPGEVVRA 60
+KK A SRS S T YTF++ESFSHEGRGIAHFG+ +HP KHGKK F+RYALPGE V A
Sbjct 1 MKKQAPSRSPSVTRYTFQVESFSHEGRGIAHFGQSNDHPVDKHGKKAFIRYALPGETVLA 60
Query 61 KITHETKRFEEGELIEILDQPSIDRIVPVCPHFGVCGGCSMQHITPNQQIQIKQHVLASH 120
KITH TKRFEEGE++EIL+ S R+ P+CPH+GVCGGCSMQHI ++QI+IKQ VL SH
Sbjct 61 KITHATKRFEEGEVLEILEGKSSLRVDPICPHYGVCGGCSMQHIATSEQIKIKQDVLKSH 120
Query 121 LQHFAGLTVNEWLTPVRSLRADYRRRARVGVRYIPAKQKLIMGFREHGSNRLTPIQSCAV 180
LQHFAGL V EWL P+RS R DYRRRAR+GVRYI AK +L+MGFREH SNRLTPIQ C V
Sbjct 121 LQHFAGLDVQEWLAPIRSDRDDYRRRARIGVRYIAAKDQLVMGFREHASNRLTPIQQCPV 180
Query 181 LDQRLSQALPELYDVLNRLVAKAEIGHIELAMGDDEVSLLVRHLNTLPDSDITQLCDYAQ 240
LD LS ALPEL ++ L AKAEIGH+ELAMGD +++L+VRHL L +D L + Q
Sbjct 181 LDHALSSALPELNQLIQSLSAKAEIGHLELAMGDQDIALVVRHLGALGKADRQALLAFCQ 240
Query 241 HKNWQLYLQAKGSDSLKRVDRSGAEMRLHYAVPAFNLNFAFSPLDFTQVNATVNQQMLKL 300
KNWQLY+ A S+ LKR+D A MRL YA+P FNLNF F+P DFTQVNA VN+QM+ L
Sbjct 241 QKNWQLYVHAGRSEQLKRLDDPQAAMRLSYALPEFNLNFNFAPSDFTQVNAGVNRQMIAL 300
Query 301 ACDLLKLQKGEHVLDLFCGLGNFSLPLARCVGDTGRVVGVEGSEEMVQRAFENAAQNALH 360
AC+LL L+KGE VLDLFCGLGNFSLP+A+CVG TG VVGVEGS++MVQRA ENAA N +
Sbjct 301 ACNLLDLKKGERVLDLFCGLGNFSLPMAQCVGQTGHVVGVEGSDKMVQRAHENAALNKIQ 360
Query 361 NVEFYSQDLTKDFSHHSWANQGFDALLIDPPRSGAFEIMHYIANFEAKRIVYVSCNPATL 420
VEF+SQDLTKDFSHHSWANQGFDALLIDPPRSGA EIM YI+NFEAKRIVYVSCNPATL
Sbjct 361 QVEFFSQDLTKDFSHHSWANQGFDALLIDPPRSGALEIMQYISNFEAKRIVYVSCNPATL 420
Query 421 ARDAGVLAQHGYQLKKVGVMDMFTHTEHVESIALFEKIQEIND 463
ARDAGVL Q GYQLKKVGVMDMFTHTEHVESIALFEKIQEIND
Sbjct 421 ARDAGVLVQKGYQLKKVGVMDMFTHTEHVESIALFEKIQEIND 463
>A0A3A8EJS7 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
[Acinetobacter guerrae]
Length=463
Score = 685 bits (1768), Expect = 0.0
Identities = 328/462 (71%), Positives = 385/462 (83%), Gaps = 1/462 (0%)
Query 3 KHASSRSKSATVYTFRIESFSHEGRGIAHFGEFAEHPQTKHGKKVFVRYALPGEVVRAKI 62
KHA+ S VYTF++ES SHEGRGIAHFG A+HP+ K GKKVF+RYALPGE VRA+I
Sbjct 2 KHAAKASTQPPVYTFQVESLSHEGRGIAHFGTAADHPELKTGKKVFIRYALPGETVRARI 61
Query 63 THETKRFEEGELIEILDQPSIDRIVPVCPHFGVCGGCSMQHITPNQQIQIKQHVLASHLQ 122
THETKR EEGE++E+L +PS R+ P+CPH+G+CGGCSMQHI ++QI++KQ VL SH Q
Sbjct 62 THETKRLEEGEMLELLSEPSALRVDPICPHYGICGGCSMQHIDSDEQIKVKQGVLKSHFQ 121
Query 123 HFAGLTVNEWLTPVRSLRADYRRRARVGVRYIPAKQKLIMGFREHGSNRLTPIQSCAVLD 182
HFA L +WL+P+RS R DYR RAR+GVRY+PAK++LIMGFREH SNRLT I+ C +L+
Sbjct 122 HFARLDAMQWLSPLRSTRQDYRHRARIGVRYLPAKKQLIMGFREHQSNRLTAIEECPILE 181
Query 183 QRLSQALPELYDVLNRLVAKAEIGHIELAMGDDEVSLLVRHLNTLPDSDITQLCDYAQHK 242
++LS+ALPE+ +L L KA IGHIELAMGD E++LLVRHL L D+ L ++ + K
Sbjct 182 RQLSEALPEIKQLLQSLKGKASIGHIELAMGDHEIALLVRHLEPLGHKDVDLLLNFVKQK 241
Query 243 NWQLYLQAKG-SDSLKRVDRSGAEMRLHYAVPAFNLNFAFSPLDFTQVNATVNQQMLKLA 301
WQLYLQ K + SLKR+D MRLHYA+P FNLNFAFSPLDFTQVN +VNQQM++LA
Sbjct 242 GWQLYLQPKSFAGSLKRIDDKQGRMRLHYALPEFNLNFAFSPLDFTQVNPSVNQQMVQLA 301
Query 302 CDLLKLQKGEHVLDLFCGLGNFSLPLARCVGDTGRVVGVEGSEEMVQRAFENAAQNALHN 361
C+LL+L++GEHVLDLFCGLGNF+LPLARCVG TGRVVGVEGSEEMVQR ENA QN +
Sbjct 302 CELLQLKQGEHVLDLFCGLGNFTLPLARCVGTTGRVVGVEGSEEMVQRGTENAKQNGISY 361
Query 362 VEFYSQDLTKDFSHHSWANQGFDALLIDPPRSGAFEIMHYIANFEAKRIVYVSCNPATLA 421
VEFYSQDLTKDFSHHSWA QGFDALLIDPPR+GA+E+M YI NF AKRIVYVSCNPATLA
Sbjct 362 VEFYSQDLTKDFSHHSWAKQGFDALLIDPPRAGAYEVMQYIPNFGAKRIVYVSCNPATLA 421
Query 422 RDAGVLAQHGYQLKKVGVMDMFTHTEHVESIALFEKIQEIND 463
RDA VLA+HGYQLKK GVMDMFTHT HVESIALFEKI+EIND
Sbjct 422 RDASVLAEHGYQLKKAGVMDMFTHTGHVESIALFEKIKEIND 463
>N9C6X6 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [Acinetobacter
ursingii ANC 3649]
Length=462
Score = 685 bits (1768), Expect = 0.0
Identities = 329/462 (71%), Positives = 386/462 (84%), Gaps = 2/462 (0%)
Query 3 KHASSRSKSATVYTFRIESFSHEGRGIAHFGEFAEHPQTKHGKKVFVRYALPGEVVRAKI 62
KHA+ S + VYTF++ES SHEGRGIAHFG EHP+ K GKKVF+RYALP E+VRAKI
Sbjct 2 KHATKPSAQSPVYTFQVESLSHEGRGIAHFGTDVEHPEAKTGKKVFIRYALPSEIVRAKI 61
Query 63 THETKRFEEGELIEILDQPSIDRIVPVCPHFGVCGGCSMQHITPNQQIQIKQHVLASHLQ 122
THETKR EEGE++E+L +PS R+ P+CPH+G+CGGC+MQHI PN+QIQ+KQ+VL SHLQ
Sbjct 62 THETKRLEEGEMLELLSEPSPLRVAPICPHYGICGGCNMQHIDPNEQIQLKQNVLKSHLQ 121
Query 123 HFAGLTVNEWLTPVRSLRADYRRRARVGVRYIPAKQKLIMGFREHGSNRLTPIQSCAVLD 182
HF GL +WLTP+RS + DYR RAR+GVRY+PAK++LIMGFREH SNRL I +C +L
Sbjct 122 HFGGLQATQWLTPLRSAQQDYRHRARIGVRYLPAKKQLIMGFREHQSNRLISIGTCPILQ 181
Query 183 QRLSQALPELYDVLNRLVAKAEIGHIELAMGDDEVSLLVRHLNTLPDSDITQLCDYAQHK 242
RLS+ALPEL +L L K IGHIELAMGD E++LLVRH+ L DI QL +A+ K
Sbjct 182 VRLSEALPELKQLLQSLKGKGSIGHIELAMGDSEIALLVRHVEPLAHKDIDQLLGFAKQK 241
Query 243 NWQLYLQAKG-SDSLKRVDRSGAEMRLHYAVPAFNLNFAFSPLDFTQVNATVNQQMLKLA 301
WQLYLQ K + SLKRVD AEMRLHY++P F+LNFAFSPLDFTQVN +VNQQM++LA
Sbjct 242 GWQLYLQPKSFASSLKRVDEQ-AEMRLHYSLPEFDLNFAFSPLDFTQVNPSVNQQMVQLA 300
Query 302 CDLLKLQKGEHVLDLFCGLGNFSLPLARCVGDTGRVVGVEGSEEMVQRAFENAAQNALHN 361
C+LL+L++GE VLDLFCGLGNF+LPLARCVG TGRVVGVEGSE+MVQR ENA +N +
Sbjct 301 CELLQLRQGERVLDLFCGLGNFTLPLARCVGTTGRVVGVEGSEDMVQRGTENAKRNEISQ 360
Query 362 VEFYSQDLTKDFSHHSWANQGFDALLIDPPRSGAFEIMHYIANFEAKRIVYVSCNPATLA 421
VEFYSQDLTKDFSHHSWA QGFDALLIDPPR+GA+E+M YI NF AKRIVYVSCNPATLA
Sbjct 361 VEFYSQDLTKDFSHHSWAKQGFDALLIDPPRAGAYEVMQYIPNFGAKRIVYVSCNPATLA 420
Query 422 RDAGVLAQHGYQLKKVGVMDMFTHTEHVESIALFEKIQEIND 463
RDA VLA+HGYQLKK GVMDMFTHT HVESIALFEK++E+ND
Sbjct 421 RDASVLAEHGYQLKKAGVMDMFTHTGHVESIALFEKMKELND 462
>A0A427PQS5 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
[Acinetobacter sp. FDAARGOS_515]
Length=462
Score = 685 bits (1768), Expect = 0.0
Identities = 329/462 (71%), Positives = 386/462 (84%), Gaps = 2/462 (0%)
Query 3 KHASSRSKSATVYTFRIESFSHEGRGIAHFGEFAEHPQTKHGKKVFVRYALPGEVVRAKI 62
KHA+ S + VYTF++ES SHEGRGIAHFG EHP+ K GKKVF+RYALP E+VRAKI
Sbjct 2 KHATKPSAQSPVYTFQVESLSHEGRGIAHFGTDVEHPEAKTGKKVFIRYALPSEIVRAKI 61
Query 63 THETKRFEEGELIEILDQPSIDRIVPVCPHFGVCGGCSMQHITPNQQIQIKQHVLASHLQ 122
THETKR EEGE++E+L +PS R+ P+CPH+G+CGGC+MQHI PN+QIQ+KQ+VL SHLQ
Sbjct 62 THETKRLEEGEMLELLSEPSPLRVAPICPHYGICGGCNMQHIDPNEQIQLKQNVLKSHLQ 121
Query 123 HFAGLTVNEWLTPVRSLRADYRRRARVGVRYIPAKQKLIMGFREHGSNRLTPIQSCAVLD 182
HF GL +WLTP+RS + DYR RAR+GVRY+PAK++LIMGFREH SNRL I +C +L
Sbjct 122 HFGGLQATQWLTPLRSAQQDYRHRARIGVRYLPAKKQLIMGFREHQSNRLISIGTCPILQ 181
Query 183 QRLSQALPELYDVLNRLVAKAEIGHIELAMGDDEVSLLVRHLNTLPDSDITQLCDYAQHK 242
RLS+ALPEL +L L K IGHIELAMGD E++LLVRH+ L DI QL +A+ K
Sbjct 182 VRLSEALPELKQLLQSLKGKGSIGHIELAMGDSEIALLVRHVEPLAHKDIDQLLGFAKQK 241
Query 243 NWQLYLQAKG-SDSLKRVDRSGAEMRLHYAVPAFNLNFAFSPLDFTQVNATVNQQMLKLA 301
WQLYLQ K + SLKRVD AEMRLHY++P F+LNFAFSPLDFTQVN +VNQQM++LA
Sbjct 242 GWQLYLQPKSFASSLKRVDEQ-AEMRLHYSLPEFDLNFAFSPLDFTQVNPSVNQQMVQLA 300
Query 302 CDLLKLQKGEHVLDLFCGLGNFSLPLARCVGDTGRVVGVEGSEEMVQRAFENAAQNALHN 361
C+LL+L++GE VLDLFCGLGNF+LPLARCVG TGRVVGVEGSE+MVQR ENA +N +
Sbjct 301 CELLQLRQGERVLDLFCGLGNFTLPLARCVGTTGRVVGVEGSEDMVQRGTENAKRNEISQ 360
Query 362 VEFYSQDLTKDFSHHSWANQGFDALLIDPPRSGAFEIMHYIANFEAKRIVYVSCNPATLA 421
VEFYSQDLTKDFSHHSWA QGFDALLIDPPR+GA+E+M YI NF AKRIVYVSCNPATLA
Sbjct 361 VEFYSQDLTKDFSHHSWAKQGFDALLIDPPRAGAYEVMQYIPNFGAKRIVYVSCNPATLA 420
Query 422 RDAGVLAQHGYQLKKVGVMDMFTHTEHVESIALFEKIQEIND 463
RDA VLA+HGYQLKK GVMDMFTHT HVESIALFEK++E+ND
Sbjct 421 RDASVLAEHGYQLKKAGVMDMFTHTGHVESIALFEKMKELND 462
>A0A3F3L216 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
[Acinetobacter ursingii]
Length=462
Score = 684 bits (1765), Expect = 0.0
Identities = 328/462 (71%), Positives = 386/462 (84%), Gaps = 2/462 (0%)
Query 3 KHASSRSKSATVYTFRIESFSHEGRGIAHFGEFAEHPQTKHGKKVFVRYALPGEVVRAKI 62
KHA+ S + VYTF++ES SHEGRGIAHFG EHP+ K GKKVF+RYALP E+VRAKI
Sbjct 2 KHATKPSAQSPVYTFQVESLSHEGRGIAHFGTDVEHPEAKTGKKVFIRYALPSEIVRAKI 61
Query 63 THETKRFEEGELIEILDQPSIDRIVPVCPHFGVCGGCSMQHITPNQQIQIKQHVLASHLQ 122
THETKR EEGE++E+L +PS R+ P+CPH+G+CGGCSMQHI PN+QIQ+KQ+VL SHLQ
Sbjct 62 THETKRLEEGEMLELLSEPSSLRVAPICPHYGICGGCSMQHIDPNEQIQLKQNVLKSHLQ 121
Query 123 HFAGLTVNEWLTPVRSLRADYRRRARVGVRYIPAKQKLIMGFREHGSNRLTPIQSCAVLD 182
HF GL +WL P+RS + DYR RAR+GVRY+PAK++LIMGFREH SNRL I +C +L
Sbjct 122 HFGGLQATQWLPPLRSAQQDYRHRARIGVRYLPAKKQLIMGFREHQSNRLISIGTCPILQ 181
Query 183 QRLSQALPELYDVLNRLVAKAEIGHIELAMGDDEVSLLVRHLNTLPDSDITQLCDYAQHK 242
RLS+ALPEL +L L K IGHIELAMGD E++LLVRH+ L +DI QL + + K
Sbjct 182 VRLSEALPELKQLLQSLKGKGSIGHIELAMGDSEIALLVRHVEPLAHNDIDQLLGFVKQK 241
Query 243 NWQLYLQAKG-SDSLKRVDRSGAEMRLHYAVPAFNLNFAFSPLDFTQVNATVNQQMLKLA 301
WQLYLQ+K + SLKRVD AEMRLHY++P F+LNFAFSPLDFTQVN +VNQQM++LA
Sbjct 242 GWQLYLQSKSFASSLKRVDEQ-AEMRLHYSLPEFDLNFAFSPLDFTQVNPSVNQQMVQLA 300
Query 302 CDLLKLQKGEHVLDLFCGLGNFSLPLARCVGDTGRVVGVEGSEEMVQRAFENAAQNALHN 361
C+LL+L++GE VLDLFCGLGNF+LPLARCVG TGRVVGVEGSE+MVQR ENA +N +
Sbjct 301 CELLQLRQGERVLDLFCGLGNFTLPLARCVGTTGRVVGVEGSEDMVQRGTENAKRNEISQ 360
Query 362 VEFYSQDLTKDFSHHSWANQGFDALLIDPPRSGAFEIMHYIANFEAKRIVYVSCNPATLA 421
VEFYSQDLTKDFSHHSWA QGFDALLIDPPR+GA+E+M YI NF AKRIVYVSCNPATLA
Sbjct 361 VEFYSQDLTKDFSHHSWAKQGFDALLIDPPRAGAYEVMQYIPNFGAKRIVYVSCNPATLA 420
Query 422 RDAGVLAQHGYQLKKVGVMDMFTHTEHVESIALFEKIQEIND 463
RDA VLA+HGYQLKK GVMDMFTHT HVESIALFEK++E+ND
Sbjct 421 RDASVLAEHGYQLKKAGVMDMFTHTGHVESIALFEKMKELND 462
>L9LNZ1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [Acinetobacter
sp. OIFC021]
Length=463
Score = 682 bits (1760), Expect = 0.0
Identities = 323/463 (70%), Positives = 385/463 (83%), Gaps = 0/463 (0%)
Query 1 LKKHASSRSKSATVYTFRIESFSHEGRGIAHFGEFAEHPQTKHGKKVFVRYALPGEVVRA 60
+K+ A SR Y F++E+ SHEGRGIAH+G +HP KHGKKVF+RYALPGE V+A
Sbjct 1 MKQQAKSRKAQQPEYIFQVETLSHEGRGIAHYGSHPDHPADKHGKKVFIRYALPGETVKA 60
Query 61 KITHETKRFEEGELIEILDQPSIDRIVPVCPHFGVCGGCSMQHITPNQQIQIKQHVLASH 120
+ITHE KR EE E+IE+L +PS +R+ VCPH+G+CGGCSMQHI P++QI++KQ+VL SH
Sbjct 61 QITHEAKRLEEAEMIELLAEPSSNRVEAVCPHYGICGGCSMQHIHPDEQIRLKQNVLQSH 120
Query 121 LQHFAGLTVNEWLTPVRSLRADYRRRARVGVRYIPAKQKLIMGFREHGSNRLTPIQSCAV 180
LQHFAG+ +WL P+RSL++DYRRRAR+GVRY+P + +LI+GFREH SNRLT I +C+V
Sbjct 121 LQHFAGIQPEQWLEPIRSLQSDYRRRARIGVRYLPKQDRLILGFREHHSNRLTSIHTCSV 180
Query 181 LDQRLSQALPELYDVLNRLVAKAEIGHIELAMGDDEVSLLVRHLNTLPDSDITQLCDYAQ 240
LD++LS +LPEL +L L KA IGH+ELA GDDE+SLLVRH+ L +SD+ QL +A
Sbjct 181 LDKKLSDSLPELRTLLQSLKGKAHIGHVELAKGDDEISLLVRHVEKLNNSDVNQLRQFAL 240
Query 241 HKNWQLYLQAKGSDSLKRVDRSGAEMRLHYAVPAFNLNFAFSPLDFTQVNATVNQQMLKL 300
HK WQLYLQ KG +SL+R+D MRLHYA+ AF +NFAFSPLDFTQVN TVN+QM++L
Sbjct 241 HKGWQLYLQPKGPESLRRIDEDQGAMRLHYALNAFEVNFAFSPLDFTQVNGTVNEQMVQL 300
Query 301 ACDLLKLQKGEHVLDLFCGLGNFSLPLARCVGDTGRVVGVEGSEEMVQRAFENAAQNALH 360
AC+LL+LQ+GE VLDLFCGLGNFSLPLARCVG G+VVGVE SEEMVQRA +NA N L
Sbjct 301 ACELLQLQQGERVLDLFCGLGNFSLPLARCVGANGQVVGVEASEEMVQRATDNAKCNNLV 360
Query 361 NVEFYSQDLTKDFSHHSWANQGFDALLIDPPRSGAFEIMHYIANFEAKRIVYVSCNPATL 420
F+SQDLTKDFSHHSWANQGFDALLIDPPR+GA+EIM Y+ NF AKRIVYVSCNPATL
Sbjct 361 QANFFSQDLTKDFSHHSWANQGFDALLIDPPRAGAYEIMQYVPNFGAKRIVYVSCNPATL 420
Query 421 ARDAGVLAQHGYQLKKVGVMDMFTHTEHVESIALFEKIQEIND 463
ARDAGVLAQHGY+LKK VMDMFTHTEHVESIALFEKIQEIND
Sbjct 421 ARDAGVLAQHGYKLKKAAVMDMFTHTEHVESIALFEKIQEIND 463
>A0A2T7FPD6 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
[Acinetobacter nosocomialis]
Length=463
Score = 682 bits (1760), Expect = 0.0
Identities = 323/463 (70%), Positives = 385/463 (83%), Gaps = 0/463 (0%)
Query 1 LKKHASSRSKSATVYTFRIESFSHEGRGIAHFGEFAEHPQTKHGKKVFVRYALPGEVVRA 60
+K+ A SR Y F++E+ SHEGRGIAH+G +HP KHGKKVF+RYALPGE V+A
Sbjct 1 MKQQAKSRKAQQPEYIFQVETLSHEGRGIAHYGSHPDHPADKHGKKVFIRYALPGETVKA 60
Query 61 KITHETKRFEEGELIEILDQPSIDRIVPVCPHFGVCGGCSMQHITPNQQIQIKQHVLASH 120
+ITHE KR EE E+IE+L +PS +R+ VCPH+G+CGGCSMQHI P++QI++KQ+VL SH
Sbjct 61 QITHEAKRLEEAEMIELLAEPSSNRVEAVCPHYGICGGCSMQHIHPDEQIRLKQNVLQSH 120
Query 121 LQHFAGLTVNEWLTPVRSLRADYRRRARVGVRYIPAKQKLIMGFREHGSNRLTPIQSCAV 180
LQHFAG+ +WL P+RSL++DYRRRAR+GVRY+P + +LI+GFREH SNRLT I +C+V
Sbjct 121 LQHFAGIQPEQWLEPIRSLQSDYRRRARIGVRYLPKQDRLILGFREHHSNRLTSIHTCSV 180
Query 181 LDQRLSQALPELYDVLNRLVAKAEIGHIELAMGDDEVSLLVRHLNTLPDSDITQLCDYAQ 240
LD++LS +LPEL +L L KA IGH+ELA GDDE+SLLVRH+ L +SD+ QL +A
Sbjct 181 LDKKLSDSLPELRTLLQSLKGKAHIGHVELAKGDDEISLLVRHVEKLNNSDVNQLRQFAL 240
Query 241 HKNWQLYLQAKGSDSLKRVDRSGAEMRLHYAVPAFNLNFAFSPLDFTQVNATVNQQMLKL 300
HK WQLYLQ KG +SL+R+D MRLHYA+ AF +NFAFSPLDFTQVN TVN+QM++L
Sbjct 241 HKGWQLYLQPKGPESLRRIDEEQGAMRLHYALNAFEVNFAFSPLDFTQVNGTVNEQMVQL 300
Query 301 ACDLLKLQKGEHVLDLFCGLGNFSLPLARCVGDTGRVVGVEGSEEMVQRAFENAAQNALH 360
AC+LL+LQ+GE VLDLFCGLGNFSLPLARCVG G+VVGVE SEEMVQRA +NA N L
Sbjct 301 ACELLQLQQGERVLDLFCGLGNFSLPLARCVGANGQVVGVEASEEMVQRATDNAKCNNLV 360
Query 361 NVEFYSQDLTKDFSHHSWANQGFDALLIDPPRSGAFEIMHYIANFEAKRIVYVSCNPATL 420
F+SQDLTKDFSHHSWANQGFDALLIDPPR+GA+EIM Y+ NF AKRIVYVSCNPATL
Sbjct 361 QASFFSQDLTKDFSHHSWANQGFDALLIDPPRAGAYEIMQYVPNFGAKRIVYVSCNPATL 420
Query 421 ARDAGVLAQHGYQLKKVGVMDMFTHTEHVESIALFEKIQEIND 463
ARDAGVLAQHGY+LKK VMDMFTHTEHVESIALFEKIQEIND
Sbjct 421 ARDAGVLAQHGYKLKKAAVMDMFTHTEHVESIALFEKIQEIND 463
>A0A5Q0RN90 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
[Acinetobacter nosocomialis]
Length=463
Score = 682 bits (1760), Expect = 0.0
Identities = 323/463 (70%), Positives = 385/463 (83%), Gaps = 0/463 (0%)
Query 1 LKKHASSRSKSATVYTFRIESFSHEGRGIAHFGEFAEHPQTKHGKKVFVRYALPGEVVRA 60
+K+ A SR Y F++E+ SHEGRGIAH+G +HP KHGKKVF+RYALPGE V+A
Sbjct 1 MKQQAKSRKAQQPEYIFQVETLSHEGRGIAHYGSHPDHPADKHGKKVFIRYALPGETVKA 60
Query 61 KITHETKRFEEGELIEILDQPSIDRIVPVCPHFGVCGGCSMQHITPNQQIQIKQHVLASH 120
+ITHE KR EE E+IE+L +PS +R+ VCPH+G+CGGCSMQHI P++QI++KQ+VL SH
Sbjct 61 QITHEAKRLEEAEMIELLAEPSSNRVEAVCPHYGICGGCSMQHIHPDEQIRLKQNVLQSH 120
Query 121 LQHFAGLTVNEWLTPVRSLRADYRRRARVGVRYIPAKQKLIMGFREHGSNRLTPIQSCAV 180
LQHFAG+ +WL P+RSL++DYRRRAR+GVRY+P + +LI+GFREH SNRLT I +C+V
Sbjct 121 LQHFAGIQPEQWLEPIRSLQSDYRRRARIGVRYLPKQDRLILGFREHHSNRLTSIHTCSV 180
Query 181 LDQRLSQALPELYDVLNRLVAKAEIGHIELAMGDDEVSLLVRHLNTLPDSDITQLCDYAQ 240
LD++LS +LPEL +L L KA IGH+ELA GDDE+SLLVRH+ L +SD+ QL +A
Sbjct 181 LDKKLSDSLPELRTLLQSLKGKAHIGHVELAKGDDEISLLVRHVEKLNNSDVNQLRQFAL 240
Query 241 HKNWQLYLQAKGSDSLKRVDRSGAEMRLHYAVPAFNLNFAFSPLDFTQVNATVNQQMLKL 300
HK WQLYLQ KG +SL+R+D MRLHYA+ AF +NFAFSPLDFTQVN TVN+QM++L
Sbjct 241 HKGWQLYLQPKGPESLRRIDEDQGAMRLHYALNAFEVNFAFSPLDFTQVNGTVNEQMVQL 300
Query 301 ACDLLKLQKGEHVLDLFCGLGNFSLPLARCVGDTGRVVGVEGSEEMVQRAFENAAQNALH 360
AC+LL+LQ+GE VLDLFCGLGNFSLPLARCVG G+VVGVE SEEMVQRA +NA N L
Sbjct 301 ACELLQLQQGERVLDLFCGLGNFSLPLARCVGANGQVVGVEASEEMVQRATDNAKCNNLV 360
Query 361 NVEFYSQDLTKDFSHHSWANQGFDALLIDPPRSGAFEIMHYIANFEAKRIVYVSCNPATL 420
F+SQDLTKDFSHHSWANQGFDALLIDPPR+GA+EIM Y+ NF AKRIVYVSCNPATL
Sbjct 361 QANFFSQDLTKDFSHHSWANQGFDALLIDPPRAGAYEIMQYVPNFGAKRIVYVSCNPATL 420
Query 421 ARDAGVLAQHGYQLKKVGVMDMFTHTEHVESIALFEKIQEIND 463
ARDAGVLAQHGY+LKK VMDMFTHTEHVESIALFEKIQEIND
Sbjct 421 ARDAGVLAQHGYKLKKAAVMDMFTHTEHVESIALFEKIQEIND 463
>A0A8B6XAI0 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
[Derxia gummosa DSM 723]
Length=479
Score = 304 bits (779), Expect = 6e-102
Identities = 186/450 (41%), Positives = 255/450 (57%), Gaps = 23/450 (5%)
Query 19 IESFSHEGRGIAHFGEFAEHPQTKHGKKVFVRYALPGEVVRAKITHETKRFEEGELIEIL 78
IES E RG+A T GK VF+ ALPGE VR K +E E+ E++
Sbjct 35 IESIDIEARGVARL---PSENGTSGGKVVFIEGALPGERVRYKSYRRKPTYEFAEVTEVI 91
Query 79 DQPSIDRIVPVCPHFGVCGGCSMQHITPNQQIQIKQHVLASHLQHFAGLTVNEWLTPVRS 138
+ S R+VP C HFG CGGCSMQH+ P Q+ IKQ VL + H L L P++
Sbjct 92 -RASASRVVPRCAHFGTCGGCSMQHLDPAAQLAIKQRVLEDNFAHIGKLRPGVMLRPIQG 150
Query 139 LRADYRRRARVGVRYIPAKQKLIMGFREHGSNRLTPIQSCAVLDQRLSQALPELYDVLNR 198
YR RAR+ VRY+P K +++GF E S+ + + C VL ++ L L +++
Sbjct 151 PDWGYRFRARLSVRYVPKKGGVLVGFHERKSSYVADMAECHVLPPHIAGLLLPLRELVGS 210
Query 199 LVAKAEIGHIELAMGDDEVSLLVRHLNTLPDSDITQLCDYAQHKNWQLYLQAKGSDSLKR 258
L + + IE A G D L++R L L D + D+A Q++LQ KG D++ R
Sbjct 211 LSIRERLPQIEYAQGADVTVLVLRVLEPLSADDERIVRDFADAHRVQIWLQPKGPDTV-R 269
Query 259 VDRSGAEM--RLHYAVPAFNLNFAFSPLDFTQVNATVNQQMLKLACDLLKLQKGEHVLDL 316
AE+ L Y +P + + F P DFTQVN +N+ ++ A LL+ + GE VLDL
Sbjct 270 PFHPPAEVAPALSYTLPEYGITMPFRPTDFTQVNHRINRVLVSQALGLLRPEPGERVLDL 329
Query 317 FCGLGNFSLPLARCVGDTGRVVGVEGSEEMVQRAFENAAQNALHNVEFYSQDLTKDFSHH 376
FCG+GNF+LPLAR +G V G+EGSE +V RA ENA N + + F +++L + +
Sbjct 330 FCGIGNFTLPLAR---RSGSVHGIEGSEALVHRAGENARFNGIEHASFAARNLFEVTADE 386
Query 377 --SWANQGFDALLIDPPRSGAFEIMHYIANFEA--------KRIVYVSCNPATLARDAGV 426
SW + FD LIDPPR GA + +A A KRIVYVSCNPATLARDA V
Sbjct 387 VASWGH--FDRWLIDPPREGALAVSQALAALAARGDHALLPKRIVYVSCNPATLARDAAV 444
Query 427 LA-QHGYQLKKVGVMDMFTHTEHVESIALF 455
L + G++L+ GV++MF HT HVES+A+F
Sbjct 445 LVHEGGFRLEAAGVVNMFPHTSHVESMAVF 474
>F5CA72 23S rRNA m(5)U 1939 methyltransferase [Streptococcus phi-m46.1-like
phage MB56Spyo045]
Length=463
Score = 130 bits (328), Expect = 2e-36
Identities = 127/468 (27%), Positives = 202/468 (43%), Gaps = 40/468 (9%)
Query 10 KSATVYTFRIESFSHEGRGIAHFGEFAEHPQTKHGKKVFVRYALPGEVVRAKITHETKRF 69
K + I SHEG G+A G F FV ALP EV+ ++ K
Sbjct 14 KKNDIIQVAISDLSHEGAGVAKHGGFV----------FFVDNALPEEVIDMRVLKVNKNS 63
Query 70 EEGELIEILDQPSIDRIVPVCPHFGVCGGCSMQHITPNQQIQIKQHVLASHLQHFAGL-- 127
G+ +E+ S R V + G + H+T Q+ K+ + L AG+
Sbjct 64 GFGK-VEVYHYLSPARNADVNLTYLRTGIADLGHLTYEDQLTFKKKQVQDSLYKIAGISD 122
Query 128 -TVNEWLTPVRSLRADYRRRARVGVRYIPAKQKLIMGFREHGSNRLTPIQSCAVLDQRLS 186
TV + L YR +A+V VR + + L GF S+ L PI + D+ +
Sbjct 123 VTVESTIGMTEPLA--YRNKAQVPVRRVNGQ--LETGFFRKHSHDLIPISDYYIQDKEID 178
Query 187 QALPELYDVLNRLVAKAE--------IGHIELAMGDDEVSLLVRHLNTLP-----DSDIT 233
+ + D+L R K + +I + G +++ + T P D I
Sbjct 179 RLINFTRDLLRRFDIKPYDETEQTGLLRNIVVRRGHYSGEMMLVLVTTRPKVFRVDQVIE 238
Query 234 QLCD-YAQHKNWQLYLQAKGSDSLKRVDRSGAEMRLHYAVPAFNLNFAFSPLDFTQVNAT 292
++ + + + + K ++++ D + N+A S F QVN
Sbjct 239 KIVEAFPAVVSIIQNINDKNTNAIFGKDFKTLYGKDTITDSMLGNNYAISAQSFYQVNTI 298
Query 293 VNQQMLKLACDLLKLQKGEHVLDLFCGLGNFSLPLARCVGDTGRVVGVEGSEEMVQRAFE 352
+ +++ + A L K + V+D + G+G L A+ V V GVE E V+ A +
Sbjct 299 MAEKLYQTAIAFSDLSKDDIVIDAYSGIGTIGLSFAKTVK---AVYGVEVIEAAVRDAQQ 355
Query 353 NAAQNALHNVEFYSQDLTKDFSHHSWANQGF--DALLIDPPRSGAFE-IMHYIANFEAKR 409
NAA N + N F + T + + +WA G +L+DPPR G E + ++
Sbjct 356 NAALNGITNAYFIAD--TAEHAMATWAKDGIKPSVILVDPPRKGLTESFIQASVAMGPQK 413
Query 410 IVYVSCNPATLARDAGVLAQHGYQLKKVGVMDMFTHTEHVESIALFEK 457
I YVSCNPAT+ARD + GY+L KV +D+F T HVE ++L EK
Sbjct 414 ITYVSCNPATMARDIKRYQELGYKLTKVQPVDLFPQTHHVECVSLLEK 461
>A2CLM0 tRNA/tmRNA (uracil-C(5))-methyltransferase [Candidatus
Endobugula sertula]
Length=365
Score = 84.7 bits (208), Expect = 5e-21
Identities = 59/186 (32%), Positives = 97/186 (52%), Gaps = 22/186 (12%)
Query 286 FTQVNATVNQQMLKLACDLLKLQKGEHVLDLFCGLGNFSLPLARCVGDTGRVVGVEGSEE 345
FTQ NA V ++ML A + K G+ +L+L+CG GNF+LPL++ + RV+ E S+
Sbjct 187 FTQPNAKVCEKMLAWAVNNSKNNHGD-LLELYCGNGNFTLPLSQ---NFNRVIATEVSKS 242
Query 346 MVQRAFENAAQNALHNVEFYSQDLTKDFS-------------HHSWANQGFDALLIDPPR 392
V A +N +N + NV ++DFS + + F + +DPPR
Sbjct 243 SVHSAQKNIKKNNIDNVSILRMS-SEDFSLAIDKIRPFRRLKKYDLESYHFSTVFVDPPR 301
Query 393 SGAFE-IMHYIANFEAKRIVYVSCNPATLARDAGVLAQHGYQLKKVGVMDMFTHTEHVES 451
+G + + I FE I+Y+SCNP TL + L + + ++ + D F +TEH+E+
Sbjct 302 AGLDDGTIEMIKRFE--NIIYISCNPKTLINNLDSLCR-THNIEALAAFDQFPYTEHLEA 358
Query 452 IALFEK 457
+ +K
Sbjct 359 GVILKK 364
>A8BSM0 tRNA (Uridine(54)-C5)-methyltransferase TrmA [Arcobacter
nitrofigilis]
Length=179
Score = 76.6 bits (187), Expect = 2e-19
Identities = 50/185 (27%), Positives = 92/185 (50%), Gaps = 21/185 (11%)
Query 286 FTQVNATVNQQMLKLACDLLKLQKGEHVLDLFCGLGNFSLPLARCVGDTGRVVGVEGSEE 345
FTQ N VN +M++ L ++ + + +L+CG GNF++PL+ +V+ E S+
Sbjct 1 FTQPNTKVNIKMIEWV--LNNIETKDDLCELYCGGGNFTIPLST---KFNKVLATEISKT 55
Query 346 MVQRAFENAAQNALHNVEFYSQDLT------------KDFSHHSWANQGFDALLIDPPRS 393
+ A N N + N++F + + ++ F + +DPPRS
Sbjct 56 SINSALLNCELNNITNIDFIRMSAEEFVEALNSVREFRRLKDINLSDYNFSTIFVDPPRS 115
Query 394 GAFEIMH-YIANFEAKRIVYVSCNPATLARDAGVLAQHGYQLKKVGVMDMFTHTEHVESI 452
G + + N+E +I+Y+SCNP TL RD L + +Q+ + D F+++ H+E+
Sbjct 116 GLDDTTRELVKNYE--QIIYISCNPETLHRDLKELIK-SHQILNFSLFDQFSYSGHIETG 172
Query 453 ALFEK 457
+ +K
Sbjct 173 VILKK 177
>Q6TWA5 OssF [Streptococcus thermophilus]
Length=206
Score = 59.3 bits (142), Expect = 3e-13
Identities = 41/144 (28%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
Query 47 VFVRYALPGEVVRAKITHETKRFEEGELIEILDQPSIDRIVPVCPHFGVCGGCSMQHITP 106
VFV AL GE V +I + F + +L++I ++ S R+ P C + CGGC + H+
Sbjct 31 VFVPGALKGEEVFCQIVSVKRNFVQAKLLKI-NKASKFRVDPECGVYEECGGCQLMHLRY 89
Query 107 NQQIQIKQHVLASHLQHFAGLTVNEW-LTPVRSLRADYRRRARVGVRYIPAKQKLIMGFR 165
++Q++ K +L L+ F + + P ++ RA++ + + G
Sbjct 90 DKQLEFKTDLLGQALKKFKPANFESYEIRPTIGMKQPQHYRAKLQFQIRSFGGSVKAGLF 149
Query 166 EHGSNRLTPIQSCAVLDQRLSQAL 189
GS+RL I C V D+ L+QA+
Sbjct 150 AEGSHRLINIDDCLVQDE-LTQAI 172
>A0A193DR63 Arsenite methyltransferase [Arsenicibacter rosenii]
Length=307
Score = 56.2 bits (134), Expect = 8e-12
Identities = 32/89 (36%), Positives = 48/89 (54%), Gaps = 4/89 (4%)
Query 285 DFTQVNATVNQQMLKLACDL----LKLQKGEHVLDLFCGLGNFSLPLARCVGDTGRVVGV 340
D+TQ++ V L L C L +++G+ V+DL G GN G TG+V+G+
Sbjct 50 DYTQLDGYVADADLALGCGLPTKFALIKEGDTVIDLGSGAGNDCFVARHETGPTGKVIGI 109
Query 341 EGSEEMVQRAFENAAQNALHNVEFYSQDL 369
+ +E M+QRA NA +NVEF D+
Sbjct 110 DFTEAMIQRARTNAEVRGFNNVEFRQGDI 138
>A8BSJ6 tRNA (Uridine(54)-C5)-methyltransferase TrmA [Aliarcobacter
skirrowii]
Length=69
Score = 46.6 bits (109), Expect = 4e-10
Identities = 26/72 (36%), Positives = 43/72 (60%), Gaps = 4/72 (6%)
Query 389 DPPRSGAFEIMHYIA-NFEAKRIVYVSCNPATLARDAGVLAQHGYQLKKVGVMDMFTHTE 447
DP RSG + +A NF I+Y+SCNP TL RD L + +++ + + D F ++E
Sbjct 1 DPSRSGLDDTTRALAKNFT--NIIYISCNPQTLHRDLEELLK-THKVLRFALFDQFAYSE 57
Query 448 HVESIALFEKIQ 459
H+ES + +K++
Sbjct 58 HIESGVILKKLK 69
>Q9L546 AknG [Streptomyces galilaeus]
Length=286
Score = 47.4 bits (111), Expect = 5e-09
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 22/122 (18%)
Query 310 GEHVLDLFCGLGNFSLPLARCVGDTGRVVGVEGSEEMVQRAFENAAQNALHNVEFYSQDL 369
G VLD+ CG G P A VG GRVVG++ +E M++ A + AA VE
Sbjct 45 GARVLDVGCGRGACVFPAAERVGPEGRVVGIDVAEAMIEEATKEAALRDAAMVEL----R 100
Query 370 TKDFSHHSWANQGFDALLIDPPRSGAFEIMHYIANFEAKRIVYVSCNPATLARDAGVLAQ 429
D H +A FD +L G++ ++++ P LAR A +L+
Sbjct 101 VMDGEHPDFAPHSFDVVL------GSYS------------VIFLPDAPTALARYAPLLSP 142
Query 430 HG 431
G
Sbjct 143 GG 144
>A0A0B4VG18 Coclaurine N-methyltransferase [Sinopodophyllum hexandrum]
Length=370
Score = 46.2 bits (108), Expect = 2e-08
Identities = 52/221 (24%), Positives = 95/221 (43%), Gaps = 36/221 (16%)
Query 199 LVAKAEIGHIELAMGDDEVSLLVRH---------LNTLPDSDITQLCDYAQHKNWQLYLQ 249
L+ K E+G + D E+ L+RH + + QL D+A H ++ +
Sbjct 28 LLRKLELGVVP----DHEIKQLIRHELDRRLRWGYKSTHQQQLAQLVDFA-HSLRRMNI- 81
Query 250 AKGSDSLKRVDRSGAEMRLHYAV----PAFNLNFAFSPLDFTQVNATVNQQMLKLACDLL 305
+D + +D + E+ + + P + + P D T + A ML L C+
Sbjct 82 ---ADEVDTLDSNIYEVPISFLRIMNGPMLKGSGCYFPHDSTTL-AEAEIAMLDLYCERA 137
Query 306 KLQKGEHVLDLFCGLGNFSLPLARCVGDTGRVVGVEGSEEMVQRAFENAAQNALHNVEFY 365
+++ G +LDL CG G +L +A+ + RV + S + ++ L NVE
Sbjct 138 QVRDGHTILDLGCGQGALTLHIAKKYTNC-RVTAITNSVSQKHFIQDQCIKSNLTNVEVL 196
Query 366 SQDLTKDFSHHSWANQGFDALLIDPPRSGAFEIMHYIANFE 406
D+TK + HS FD + + E++ ++ N+E
Sbjct 197 LADITKHDTSHS-----FDRVFV-------IELLEHMKNYE 225
>W0LMV8 Arsenite methyltransferase [uncultured bacterium]
Length=270
Score = 44.3 bits (103), Expect = 5e-08
Identities = 25/61 (41%), Positives = 40/61 (66%), Gaps = 0/61 (0%)
Query 304 LLKLQKGEHVLDLFCGLGNFSLPLARCVGDTGRVVGVEGSEEMVQRAFENAAQNALHNVE 363
L++L+ G+ VLDL G G L A+ VG TG G++ ++EM++ A +N A++ L NV+
Sbjct 75 LVELEAGQTVLDLGSGGGIDVLLSAKRVGQTGFAYGLDMTDEMLELAEKNKAESGLTNVK 134
Query 364 F 364
F
Sbjct 135 F 135
Lambda K H a alpha
0.323 0.137 0.411 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3033591
Database: b990d211f047a5f9619758abd523fefc.TrEMBL.fasta
Posted date: May 14, 2024 1:42 PM
Number of letters in database: 8,547
Number of sequences in database: 22
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
