BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 6b0e372aea5b2b02be0749a69349063a.SwissProt.fasta
20 sequences; 3,119 total letters
Query= ACIAD3122
Length=152
Score E
Sequences producing significant alignments: (Bits) Value
Q6F801 Protein-export protein SecB [Acinetobacter baylyi (strain ... 301 1e-110
A3M237 Protein-export protein SecB [Acinetobacter baumannii (stra... 281 9e-103
B0VKR1 Protein-export protein SecB [Acinetobacter baumannii (stra... 281 9e-103
B2HTB2 Protein-export protein SecB [Acinetobacter baumannii (stra... 281 9e-103
B7I5H3 Protein-export protein SecB [Acinetobacter baumannii (stra... 281 9e-103
B7H063 Protein-export protein SecB [Acinetobacter baumannii (stra... 281 9e-103
Q1Q9Y8 Protein-export protein SecB [Psychrobacter cryohalolentis ... 188 4e-66
Q4FRF4 Protein-export protein SecB [Psychrobacter arcticus (strai... 180 6e-63
A5WDL8 Protein-export protein SecB [Psychrobacter sp. (strain PRw... 179 3e-62
A1U5G9 Protein-export protein SecB [Marinobacter nauticus (strain... 150 8e-51
B4F139 Protein-export protein SecB [Proteus mirabilis (strain HI4... 149 1e-50
A1RQ93 Protein-export protein SecB [Shewanella sp. (strain W3-18-1)] 147 8e-50
Q0I0Q4 Protein-export protein SecB [Shewanella sp. (strain MR-7)] 147 8e-50
A4Y1E5 Protein-export protein SecB [Shewanella putrefaciens (stra... 147 8e-50
B1KQ11 Protein-export protein SecB [Shewanella woodyi (strain ATC... 147 8e-50
Q8EKP0 Protein-export protein SecB [Shewanella oneidensis (strain... 147 1e-49
Q8KRM2 Protein-export protein SecB [Serratia marcescens] 143 3e-48
P0AG86 Protein-export protein SecB [Escherichia coli (strain K12)] 142 6e-48
P32002 Protein-export protein SecB [Buchnera aphidicola subsp. Sc... 132 1e-43
P44853 Protein-export protein SecB [Haemophilus influenzae (strai... 123 3e-40
>Q6F801 Protein-export protein SecB [Acinetobacter baylyi (strain
ATCC 33305 / BD413 / ADP1)]
Length=151
Score = 301 bits (771), Expect = 1e-110
Identities = 151/151 (100%), Positives = 151/151 (100%), Gaps = 0/151 (0%)
Query 1 MSEEQQTQPQLALERLYTKDISFEVPGPQVFTKQWQPELNINLSSSAEKIDPTHFEVSLK 60
MSEEQQTQPQLALERLYTKDISFEVPGPQVFTKQWQPELNINLSSSAEKIDPTHFEVSLK
Sbjct 1 MSEEQQTQPQLALERLYTKDISFEVPGPQVFTKQWQPELNINLSSSAEKIDPTHFEVSLK 60
Query 61 VVVQANNEGETAFIVDVTQSGIFLIDNIEEDRLPYILGAYCPNILFPFLREAVNDMVTKG 120
VVVQANNEGETAFIVDVTQSGIFLIDNIEEDRLPYILGAYCPNILFPFLREAVNDMVTKG
Sbjct 61 VVVQANNEGETAFIVDVTQSGIFLIDNIEEDRLPYILGAYCPNILFPFLREAVNDMVTKG 120
Query 121 SFPQLLLTPINFDAEFEANLERAQTAVEGQA 151
SFPQLLLTPINFDAEFEANLERAQTAVEGQA
Sbjct 121 SFPQLLLTPINFDAEFEANLERAQTAVEGQA 151
>A3M237 Protein-export protein SecB [Acinetobacter baumannii (strain
ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377)]
Length=152
Score = 281 bits (719), Expect = 9e-103
Identities = 141/152 (93%), Positives = 147/152 (97%), Gaps = 1/152 (1%)
Query 1 MSEEQQTQPQLALERLYTKDISFEVPGPQVFTKQWQPELNINLSSSAEKIDPTHFEVSLK 60
MSEEQQ QPQLALER+YTKDISFEVPG QVFTKQWQPELNINLSS+AEKIDPTHFEVSLK
Sbjct 1 MSEEQQVQPQLALERIYTKDISFEVPGAQVFTKQWQPELNINLSSAAEKIDPTHFEVSLK 60
Query 61 VVVQANNEGETAFIVDVTQSGIFLIDNIEEDRLPYILGAYCPNILFPFLREAVNDMVTKG 120
VVVQANN+ ETAFIVDVTQSGIFLIDNIEEDRLPYILGAYCPNILFPFLREAVND+VTKG
Sbjct 61 VVVQANNDNETAFIVDVTQSGIFLIDNIEEDRLPYILGAYCPNILFPFLREAVNDLVTKG 120
Query 121 SFPQLLLTPINFDAEFEANLERAQ-TAVEGQA 151
SFPQLLLTPINFDAEFEAN++RAQ AVEGQA
Sbjct 121 SFPQLLLTPINFDAEFEANMQRAQAAAVEGQA 152
>B0VKR1 Protein-export protein SecB [Acinetobacter baumannii (strain
SDF)]
Length=152
Score = 281 bits (719), Expect = 9e-103
Identities = 141/152 (93%), Positives = 147/152 (97%), Gaps = 1/152 (1%)
Query 1 MSEEQQTQPQLALERLYTKDISFEVPGPQVFTKQWQPELNINLSSSAEKIDPTHFEVSLK 60
MSEEQQ QPQLALER+YTKDISFEVPG QVFTKQWQPELNINLSS+AEKIDPTHFEVSLK
Sbjct 1 MSEEQQVQPQLALERIYTKDISFEVPGAQVFTKQWQPELNINLSSAAEKIDPTHFEVSLK 60
Query 61 VVVQANNEGETAFIVDVTQSGIFLIDNIEEDRLPYILGAYCPNILFPFLREAVNDMVTKG 120
VVVQANN+ ETAFIVDVTQSGIFLIDNIEEDRLPYILGAYCPNILFPFLREAVND+VTKG
Sbjct 61 VVVQANNDNETAFIVDVTQSGIFLIDNIEEDRLPYILGAYCPNILFPFLREAVNDLVTKG 120
Query 121 SFPQLLLTPINFDAEFEANLERAQ-TAVEGQA 151
SFPQLLLTPINFDAEFEAN++RAQ AVEGQA
Sbjct 121 SFPQLLLTPINFDAEFEANMQRAQAAAVEGQA 152
>B2HTB2 Protein-export protein SecB [Acinetobacter baumannii (strain
ACICU)]
Length=152
Score = 281 bits (719), Expect = 9e-103
Identities = 141/152 (93%), Positives = 147/152 (97%), Gaps = 1/152 (1%)
Query 1 MSEEQQTQPQLALERLYTKDISFEVPGPQVFTKQWQPELNINLSSSAEKIDPTHFEVSLK 60
MSEEQQ QPQLALER+YTKDISFEVPG QVFTKQWQPELNINLSS+AEKIDPTHFEVSLK
Sbjct 1 MSEEQQVQPQLALERIYTKDISFEVPGAQVFTKQWQPELNINLSSAAEKIDPTHFEVSLK 60
Query 61 VVVQANNEGETAFIVDVTQSGIFLIDNIEEDRLPYILGAYCPNILFPFLREAVNDMVTKG 120
VVVQANN+ ETAFIVDVTQSGIFLIDNIEEDRLPYILGAYCPNILFPFLREAVND+VTKG
Sbjct 61 VVVQANNDNETAFIVDVTQSGIFLIDNIEEDRLPYILGAYCPNILFPFLREAVNDLVTKG 120
Query 121 SFPQLLLTPINFDAEFEANLERAQ-TAVEGQA 151
SFPQLLLTPINFDAEFEAN++RAQ AVEGQA
Sbjct 121 SFPQLLLTPINFDAEFEANMQRAQAAAVEGQA 152
>B7I5H3 Protein-export protein SecB [Acinetobacter baumannii (strain
AB0057)]
Length=152
Score = 281 bits (719), Expect = 9e-103
Identities = 141/152 (93%), Positives = 147/152 (97%), Gaps = 1/152 (1%)
Query 1 MSEEQQTQPQLALERLYTKDISFEVPGPQVFTKQWQPELNINLSSSAEKIDPTHFEVSLK 60
MSEEQQ QPQLALER+YTKDISFEVPG QVFTKQWQPELNINLSS+AEKIDPTHFEVSLK
Sbjct 1 MSEEQQVQPQLALERIYTKDISFEVPGAQVFTKQWQPELNINLSSAAEKIDPTHFEVSLK 60
Query 61 VVVQANNEGETAFIVDVTQSGIFLIDNIEEDRLPYILGAYCPNILFPFLREAVNDMVTKG 120
VVVQANN+ ETAFIVDVTQSGIFLIDNIEEDRLPYILGAYCPNILFPFLREAVND+VTKG
Sbjct 61 VVVQANNDNETAFIVDVTQSGIFLIDNIEEDRLPYILGAYCPNILFPFLREAVNDLVTKG 120
Query 121 SFPQLLLTPINFDAEFEANLERAQ-TAVEGQA 151
SFPQLLLTPINFDAEFEAN++RAQ AVEGQA
Sbjct 121 SFPQLLLTPINFDAEFEANMQRAQAAAVEGQA 152
>B7H063 Protein-export protein SecB [Acinetobacter baumannii (strain
AB307-0294)]
Length=152
Score = 281 bits (719), Expect = 9e-103
Identities = 141/152 (93%), Positives = 147/152 (97%), Gaps = 1/152 (1%)
Query 1 MSEEQQTQPQLALERLYTKDISFEVPGPQVFTKQWQPELNINLSSSAEKIDPTHFEVSLK 60
MSEEQQ QPQLALER+YTKDISFEVPG QVFTKQWQPELNINLSS+AEKIDPTHFEVSLK
Sbjct 1 MSEEQQVQPQLALERIYTKDISFEVPGAQVFTKQWQPELNINLSSAAEKIDPTHFEVSLK 60
Query 61 VVVQANNEGETAFIVDVTQSGIFLIDNIEEDRLPYILGAYCPNILFPFLREAVNDMVTKG 120
VVVQANN+ ETAFIVDVTQSGIFLIDNIEEDRLPYILGAYCPNILFPFLREAVND+VTKG
Sbjct 61 VVVQANNDNETAFIVDVTQSGIFLIDNIEEDRLPYILGAYCPNILFPFLREAVNDLVTKG 120
Query 121 SFPQLLLTPINFDAEFEANLERAQ-TAVEGQA 151
SFPQLLLTPINFDAEFEAN++RAQ AVEGQA
Sbjct 121 SFPQLLLTPINFDAEFEANMQRAQAAAVEGQA 152
>Q1Q9Y8 Protein-export protein SecB [Psychrobacter cryohalolentis
(strain ATCC BAA-1226 / DSM 17306 / VKM B-2378 / K5)]
Length=150
Score = 188 bits (478), Expect = 4e-66
Identities = 89/148 (60%), Positives = 114/148 (77%), Gaps = 0/148 (0%)
Query 4 EQQTQPQLALERLYTKDISFEVPGPQVFTKQWQPELNINLSSSAEKIDPTHFEVSLKVVV 63
E+Q QPQLALER+Y KD+S EVPG VFTK+W PEL+INLSS+AEK+D H++V L V V
Sbjct 3 EEQAQPQLALERIYVKDMSLEVPGAGVFTKEWNPELDINLSSNAEKLDDDHYQVVLTVSV 62
Query 64 QANNEGETAFIVDVTQSGIFLIDNIEEDRLPYILGAYCPNILFPFLREAVNDMVTKGSFP 123
A N E AFI +V Q+GIFL+ +I ED++ ILGAYCPN+LFP+ RE ++D+VT+GSFP
Sbjct 63 TAKNAEEAAFIAEVHQAGIFLLKDIPEDQIGQILGAYCPNVLFPYAREVISDIVTRGSFP 122
Query 124 QLLLTPINFDAEFEANLERAQTAVEGQA 151
QLLL P+NFD F + ++AQ EG A
Sbjct 123 QLLLAPVNFDQAFAQSQQQAQVDAEGNA 150
>Q4FRF4 Protein-export protein SecB [Psychrobacter arcticus (strain
DSM 17307 / VKM B-2377 / 273-4)]
Length=148
Score = 180 bits (457), Expect = 6e-63
Identities = 87/148 (59%), Positives = 112/148 (76%), Gaps = 2/148 (1%)
Query 4 EQQTQPQLALERLYTKDISFEVPGPQVFTKQWQPELNINLSSSAEKIDPTHFEVSLKVVV 63
E+Q QPQLALER+Y KD+S EVPG VFTK+W PEL+INLSS+AEK+D H++V L V V
Sbjct 3 EEQAQPQLALERIYVKDMSLEVPGAGVFTKEWNPELDINLSSNAEKLDDDHYQVVLTVSV 62
Query 64 QANNEGETAFIVDVTQSGIFLIDNIEEDRLPYILGAYCPNILFPFLREAVNDMVTKGSFP 123
A N E AFI +V Q+GIFL+ +I ED++ ILGAYCPN+LFP+ RE ++D+VT+GSFP
Sbjct 63 TAKNAEEAAFIAEVHQAGIFLLKDIPEDQIGQILGAYCPNVLFPYAREVISDIVTRGSFP 122
Query 124 QLLLTPINFDAEFEANLERAQTAVEGQA 151
QLLL P+NFD + + + Q EG A
Sbjct 123 QLLLAPVNFDQAYAQS--QQQVDAEGNA 148
>A5WDL8 Protein-export protein SecB [Psychrobacter sp. (strain
PRwf-1)]
Length=151
Score = 179 bits (453), Expect = 3e-62
Identities = 89/152 (59%), Positives = 116/152 (76%), Gaps = 2/152 (1%)
Query 1 MSEEQ-QTQPQLALERLYTKDISFEVPGPQVFTKQWQPELNINLSSSAEKIDPTHFEVSL 59
M+E+Q Q QPQLALER+Y KD+S EV G +VFTK+WQPEL+INL+++AE +D H++V L
Sbjct 1 MAEQQAQAQPQLALERIYVKDMSLEVAGAEVFTKEWQPELDINLATTAEPLDEDHYQVIL 60
Query 60 KVVVQANNEGETAFIVDVTQSGIFLIDNIEEDRLPYILGAYCPNILFPFLREAVNDMVTK 119
V V A N G AFI +V Q+GIFLI +I ED++ ILGAYCPNILFP+ RE ++D+VT+
Sbjct 61 TVTVNAQNAGAAAFIAEVHQAGIFLIKDIPEDQVGQILGAYCPNILFPYAREVISDIVTR 120
Query 120 GSFPQLLLTPINFDAEFEANLERAQTAVEGQA 151
GSFPQLLL P+NFD + A ++ T EG A
Sbjct 121 GSFPQLLLAPVNFDQAY-AQSQQQVTDGEGNA 151
>A1U5G9 Protein-export protein SecB [Marinobacter nauticus (strain
ATCC 700491 / DSM 11845 / VT8)]
Length=165
Score = 150 bits (379), Expect = 8e-51
Identities = 72/149 (48%), Positives = 102/149 (68%), Gaps = 1/149 (1%)
Query 4 EQQTQPQLALERLYTKDISFEVPG-PQVFTKQWQPELNINLSSSAEKIDPTHFEVSLKVV 62
E Q QPQ AL+R+Y KD+SFE P P VF +QW+P++N++L++S KI +EV L +
Sbjct 11 ENQNQPQFALQRIYVKDLSFESPNSPLVFQEQWKPQVNLDLNTSHNKISDNQYEVVLSLT 70
Query 63 VQANNEGETAFIVDVTQSGIFLIDNIEEDRLPYILGAYCPNILFPFLREAVNDMVTKGSF 122
V A + A+IV++ Q G+F+I IE +L +LGAYCP ILFP+ REA++ +V KGSF
Sbjct 71 VTAKVGEKVAYIVEIQQGGVFMISGIEGPQLGQMLGAYCPTILFPYAREAIDGIVNKGSF 130
Query 123 PQLLLTPINFDAEFEANLERAQTAVEGQA 151
P L+L P+NFDA + L+R Q G+A
Sbjct 131 PALMLAPVNFDAIYAQALKRKQEEAAGEA 159
>B4F139 Protein-export protein SecB [Proteus mirabilis (strain
HI4320)]
Length=157
Score = 149 bits (377), Expect = 1e-50
Identities = 71/145 (49%), Positives = 102/145 (70%), Gaps = 1/145 (1%)
Query 1 MSEEQQTQPQLALERLYTKDISFEVPG-PQVFTKQWQPELNINLSSSAEKIDPTHFEVSL 59
MSE+Q + ++R+YTKDISFE P PQVF K+WQPE+ ++L +S+ + +EV L
Sbjct 1 MSEQQNQEMTFQIQRIYTKDISFEAPNAPQVFQKEWQPEVKLDLDTSSNTLAENVYEVIL 60
Query 60 KVVVQANNEGETAFIVDVTQSGIFLIDNIEEDRLPYILGAYCPNILFPFLREAVNDMVTK 119
+V V A E ETAF+ +V Q+GIF ++ IE +L + LGAYCPN+LFP+ RE + ++V +
Sbjct 61 RVTVTATMEEETAFLCEVQQAGIFTVEGIEGTQLAHCLGAYCPNVLFPYARECITNLVGR 120
Query 120 GSFPQLLLTPINFDAEFEANLERAQ 144
G+FPQL L P+NFDA F L++ Q
Sbjct 121 GTFPQLNLAPVNFDALFMNYLQQQQ 145
>A1RQ93 Protein-export protein SecB [Shewanella sp. (strain W3-18-1)]
Length=161
Score = 147 bits (372), Expect = 8e-50
Identities = 71/152 (47%), Positives = 101/152 (66%), Gaps = 1/152 (1%)
Query 1 MSEEQQTQPQLALERLYTKDISFEVPG-PQVFTKQWQPELNINLSSSAEKIDPTHFEVSL 59
++ +Q PQ ++R+YTKD+SFE P P VF K+W PE+ ++L + + K+ +EV L
Sbjct 4 VANNEQQAPQFNIQRVYTKDVSFETPNSPAVFQKEWNPEVKLDLDTRSAKLADDVYEVVL 63
Query 60 KVVVQANNEGETAFIVDVTQSGIFLIDNIEEDRLPYILGAYCPNILFPFLREAVNDMVTK 119
+ V A N GETAF+ +V Q+GIF I + E +L + LGAYCPNILFP+ REAV +V +
Sbjct 64 SLTVTAQNGGETAFLCEVQQAGIFSISGLTEPQLAHSLGAYCPNILFPYAREAVGSLVGR 123
Query 120 GSFPQLLLTPINFDAEFEANLERAQTAVEGQA 151
G+FPQL L P+NFDA F +++ Q A A
Sbjct 124 GTFPQLNLAPVNFDALFAQYVQQRQAAATAPA 155
>Q0I0Q4 Protein-export protein SecB [Shewanella sp. (strain MR-7)]
Length=161
Score = 147 bits (372), Expect = 8e-50
Identities = 71/152 (47%), Positives = 101/152 (66%), Gaps = 1/152 (1%)
Query 1 MSEEQQTQPQLALERLYTKDISFEVPG-PQVFTKQWQPELNINLSSSAEKIDPTHFEVSL 59
++ +Q PQ ++R+YTKD+SFE P P VF K+W PE+ ++L + + K+ +EV L
Sbjct 4 VANNEQQAPQFNIQRVYTKDVSFETPNSPAVFQKEWNPEVKLDLDTRSAKLADDVYEVVL 63
Query 60 KVVVQANNEGETAFIVDVTQSGIFLIDNIEEDRLPYILGAYCPNILFPFLREAVNDMVTK 119
+ V A N GETAF+ +V Q+GIF I + E +L + LGAYCPNILFP+ REAV +V +
Sbjct 64 SLTVTAQNAGETAFLCEVQQAGIFSIAGLSEPQLAHSLGAYCPNILFPYAREAVGSLVGR 123
Query 120 GSFPQLLLTPINFDAEFEANLERAQTAVEGQA 151
G+FPQL L P+NFDA F +++ Q A A
Sbjct 124 GTFPQLNLAPVNFDALFAQYVQQRQAAAAAPA 155
>A4Y1E5 Protein-export protein SecB [Shewanella putrefaciens (strain
CN-32 / ATCC BAA-453)]
Length=161
Score = 147 bits (372), Expect = 8e-50
Identities = 71/152 (47%), Positives = 101/152 (66%), Gaps = 1/152 (1%)
Query 1 MSEEQQTQPQLALERLYTKDISFEVPG-PQVFTKQWQPELNINLSSSAEKIDPTHFEVSL 59
++ +Q PQ ++R+YTKD+SFE P P VF K+W PE+ ++L + + K+ +EV L
Sbjct 4 VANNEQQAPQFNIQRVYTKDVSFETPNSPAVFQKEWNPEVKLDLDTRSAKLADDVYEVVL 63
Query 60 KVVVQANNEGETAFIVDVTQSGIFLIDNIEEDRLPYILGAYCPNILFPFLREAVNDMVTK 119
+ V A N GETAF+ +V Q+GIF I + E +L + LGAYCPNILFP+ REAV +V +
Sbjct 64 SLTVTAQNGGETAFLCEVQQAGIFSISGLTEPQLAHSLGAYCPNILFPYAREAVGSLVGR 123
Query 120 GSFPQLLLTPINFDAEFEANLERAQTAVEGQA 151
G+FPQL L P+NFDA F +++ Q A A
Sbjct 124 GTFPQLNLAPVNFDALFAQYVQQRQAAATAPA 155
>B1KQ11 Protein-export protein SecB [Shewanella woodyi (strain
ATCC 51908 / MS32)]
Length=163
Score = 147 bits (372), Expect = 8e-50
Identities = 72/152 (47%), Positives = 100/152 (66%), Gaps = 1/152 (1%)
Query 1 MSEEQQTQPQLALERLYTKDISFEVPG-PQVFTKQWQPELNINLSSSAEKIDPTHFEVSL 59
++ +Q PQ ++R+YTKDISFE P P VF K+W PE+ ++L + + K+ FEV L
Sbjct 4 VANNEQQDPQFNIQRVYTKDISFETPNSPAVFQKEWTPEVKLDLDTRSAKLADNVFEVVL 63
Query 60 KVVVQANNEGETAFIVDVTQSGIFLIDNIEEDRLPYILGAYCPNILFPFLREAVNDMVTK 119
+ V A N ETAF+ +V Q+GIF I+ + E +L + LGAYCPNILFP+ REAV +V +
Sbjct 64 SLTVTAKNGEETAFLCEVQQAGIFAINGLTEQQLAHSLGAYCPNILFPYAREAVGSLVAR 123
Query 120 GSFPQLLLTPINFDAEFEANLERAQTAVEGQA 151
G+FPQL L P+NFDA F + + Q E A
Sbjct 124 GTFPQLNLAPVNFDALFAQYVNQRQAGAEEAA 155
>Q8EKP0 Protein-export protein SecB [Shewanella oneidensis (strain
MR-1)]
Length=157
Score = 147 bits (371), Expect = 1e-49
Identities = 71/152 (47%), Positives = 102/152 (67%), Gaps = 1/152 (1%)
Query 1 MSEEQQTQPQLALERLYTKDISFEVPG-PQVFTKQWQPELNINLSSSAEKIDPTHFEVSL 59
++ +Q PQ ++R+YTKD+SFE P P VF K+W PE+ ++L + + K+ +EV L
Sbjct 4 VANNEQQAPQFNIQRVYTKDVSFETPNSPAVFQKEWNPEVKLDLDTRSAKLADDVYEVVL 63
Query 60 KVVVQANNEGETAFIVDVTQSGIFLIDNIEEDRLPYILGAYCPNILFPFLREAVNDMVTK 119
+ V A N GETAF+ +V Q+GIF I + E +L + LGAYCPNILFP+ REAV +V +
Sbjct 64 SLTVTAQNGGETAFLCEVQQAGIFSIAGLTEPQLAHSLGAYCPNILFPYAREAVGSLVGR 123
Query 120 GSFPQLLLTPINFDAEFEANLERAQTAVEGQA 151
G+FPQL L P+NFDA F +++ Q A +A
Sbjct 124 GTFPQLNLAPVNFDALFAQYVQQRQAAAAEEA 155
>Q8KRM2 Protein-export protein SecB [Serratia marcescens]
Length=156
Score = 143 bits (361), Expect = 3e-48
Identities = 72/152 (47%), Positives = 103/152 (68%), Gaps = 2/152 (1%)
Query 1 MSEEQQTQPQLALERLYTKDISFEVPG-PQVFTKQWQPELNINLSSSAEKIDPTHFEVSL 59
MSE+ T+ ++R+YTKDISFE P PQVF ++WQPE+ ++L +++ ++ +EV L
Sbjct 1 MSEQNSTEMAFQIQRIYTKDISFEAPNAPQVFQQEWQPEVKLDLDTASSQLADEVYEVVL 60
Query 60 KVVVQANNEGETAFIVDVTQSGIFLIDNIEEDRLPYILGAYCPNILFPFLREAVNDMVTK 119
+V V A ETAF+ +V Q+GIF + IE +L + LGAYCPNILFP+ RE + +V++
Sbjct 61 RVTVTATLGEETAFLCEVQQAGIFSVAGIEGTQLAHCLGAYCPNILFPYARECITSLVSR 120
Query 120 GSFPQLLLTPINFDAEFEANLERAQTAVEGQA 151
G+FPQL L P+NFDA F N + Q EG A
Sbjct 121 GTFPQLNLAPVNFDALF-MNYLQQQAEGEGAA 151
>P0AG86 Protein-export protein SecB [Escherichia coli (strain
K12)]
Length=155
Score = 142 bits (359), Expect = 6e-48
Identities = 73/150 (49%), Positives = 101/150 (67%), Gaps = 3/150 (2%)
Query 1 MSEEQQTQPQLALERLYTKDISFEVPG-PQVFTKQWQPELNINLSSSAEKIDPTHFEVSL 59
MSE+ T+ ++R+YTKDISFE P P VF K WQPE+ ++L +++ ++ +EV L
Sbjct 1 MSEQNNTEMTFQIQRIYTKDISFEAPNAPHVFQKDWQPEVKLDLDTASSQLADDVYEVVL 60
Query 60 KVVVQANNEGETAFIVDVTQSGIFLIDNIEEDRLPYILGAYCPNILFPFLREAVNDMVTK 119
+V V A+ ETAF+ +V Q GIF I IE ++ + LGAYCPNILFP+ RE + MV++
Sbjct 61 RVTVTASLGEETAFLCEVQQGGIFSIAGIEGTQMAHCLGAYCPNILFPYARECITSMVSR 120
Query 120 GSFPQLLLTPINFDAEFEANLERAQTAVEG 149
G+FPQL L P+NFDA F L+ Q A EG
Sbjct 121 GTFPQLNLAPVNFDALFMNYLQ--QQAGEG 148
>P32002 Protein-export protein SecB [Buchnera aphidicola subsp.
Schizaphis graminum (strain Sg)]
Length=154
Score = 132 bits (331), Expect = 1e-43
Identities = 64/142 (45%), Positives = 93/142 (65%), Gaps = 1/142 (1%)
Query 1 MSEEQQTQPQLALERLYTKDISFEVPG-PQVFTKQWQPELNINLSSSAEKIDPTHFEVSL 59
MSEE+ + ++R+Y +D SFE P P +F K+W PE+ NLS+ ++K+ P FE +L
Sbjct 1 MSEEKLKKKSFEIQRIYIRDASFEAPNTPNIFHKKWDPEIKFNLSTVSKKLKPNIFETNL 60
Query 60 KVVVQANNEGETAFIVDVTQSGIFLIDNIEEDRLPYILGAYCPNILFPFLREAVNDMVTK 119
+V V +E F+ DV Q GIF I ++E L + LG+YCPNILFP+ R ++ +V+
Sbjct 61 QVRVIVKSEENLVFLCDVHQVGIFFISCLDEQELKHCLGSYCPNILFPYARTCISSLVSY 120
Query 120 GSFPQLLLTPINFDAEFEANLE 141
GSFPQL L+PI+FD F NL+
Sbjct 121 GSFPQLNLSPIDFDDIFCKNLK 142
>P44853 Protein-export protein SecB [Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=169
Score = 123 bits (309), Expect = 3e-40
Identities = 57/143 (40%), Positives = 95/143 (66%), Gaps = 3/143 (2%)
Query 5 QQTQPQLALERLYTKDISFEVPG-PQVFTKQWQPELNINLSSSAEKIDPTHFEVSLKVVV 63
++ QP L ++R+Y KD+SFE P P +F ++W+P+L +LS+ ++ +EV L + V
Sbjct 12 EEQQPVLQIQRIYVKDVSFEAPNLPHIFQQEWKPKLGFDLSTETTQVGDDLYEVVLNISV 71
Query 64 QANNE--GETAFIVDVTQSGIFLIDNIEEDRLPYILGAYCPNILFPFLREAVNDMVTKGS 121
+ E G+ AFI +V Q+G+F I +E+ ++ + L + CPN+LFP+ RE V+++V +G+
Sbjct 72 ETTLEDSGDVAFICEVKQAGVFTISGLEDVQMAHCLTSQCPNMLFPYARELVSNLVNRGT 131
Query 122 FPQLLLTPINFDAEFEANLERAQ 144
FP L L+P+NFDA F + R Q
Sbjct 132 FPALNLSPVNFDALFVEYMNRQQ 154
Lambda K H a alpha
0.320 0.137 0.393 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 278284
Database: 6b0e372aea5b2b02be0749a69349063a.SwissProt.fasta
Posted date: Jun 1, 2024 11:14 PM
Number of letters in database: 3,119
Number of sequences in database: 20
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
