BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 9049e86781992bd4d94ce7e66dd70a45.SwissProt.fasta
9 sequences; 1,228 total letters
Query= ACIAD3123
Length=138
Score E
Sequences producing significant alignments: (Bits) Value
Q8ZAU2 Probable soluble cytochrome b562 2 [Yersinia pestis] 89.4 7e-28
P0ABE8 Soluble cytochrome b562 [Escherichia coli O157:H7] 83.6 1e-25
P0ABE7 Soluble cytochrome b562 [Escherichia coli] 83.2 2e-25
Q8CVG7 Soluble cytochrome b562 [Escherichia coli O6:H1 (strain CF... 82.0 5e-25
P63727 Soluble cytochrome b562 [Salmonella typhimurium (strain LT... 79.7 4e-24
P63728 Soluble cytochrome b562 [Salmonella typhi] 79.7 4e-24
Q9X6B1 Probable soluble cytochrome b562 1 [Yersinia pestis] 78.2 2e-23
Q9CMY0 Uncharacterized protein PM0670 [Pasteurella multocida (str... 62.0 3e-17
Q180X8 Uracil phosphoribosyltransferase [Clostridioides difficile... 33.1 3e-06
>Q8ZAU2 Probable soluble cytochrome b562 2 [Yersinia pestis]
Length=128
Score = 89.4 bits (220), Expect = 7e-28
Identities = 48/126 (38%), Positives = 74/126 (59%), Gaps = 0/126 (0%)
Query 12 KILGSILLIGSLSVSHLAMAASLQNNMISIATAYSDFSKSSNVKDAETALNKMKLAAIDS 71
K L +++ LS S L MAAS+ ++M +IA Y K+ + + L M++AA+D+
Sbjct 3 KTLMALITAALLSTSSLVMAASVADDMETIAEHYGKVLKADSTAVIKQDLQAMRVAAVDA 62
Query 72 QKSKPSKLANKPDNSAEVMDYHKGLDQLVAEIDKTNLLVKAGKLDQAKVEGKTLLDIRNV 131
QK P+KL +K ++S E+ D+ G+D L+ EID L GKLD+AK + D RN
Sbjct 63 QKGIPTKLKSKVEDSPEMKDFRHGMDVLIGEIDGALALADQGKLDEAKQAAQDFKDTRNT 122
Query 132 NHKKFK 137
HKK++
Sbjct 123 YHKKYR 128
>P0ABE8 Soluble cytochrome b562 [Escherichia coli O157:H7]
Length=128
Score = 83.6 bits (205), Expect = 1e-25
Identities = 46/127 (36%), Positives = 71/127 (56%), Gaps = 0/127 (0%)
Query 11 KKILGSILLIGSLSVSHLAMAASLQNNMISIATAYSDFSKSSNVKDAETALNKMKLAAID 70
+K L +IL + SL S + AA L++NM ++ K+ N + AL KM+ AA+D
Sbjct 2 RKSLLAILAVSSLVFSSASFAADLEDNMETLNDNLKVVEKADNAAQVKDALTKMRAAALD 61
Query 71 SQKSKPSKLANKPDNSAEVMDYHKGLDQLVAEIDKTNLLVKAGKLDQAKVEGKTLLDIRN 130
+QK+ P KL +K +S E+ D+ G D LV +ID L GK+ +A+ + L RN
Sbjct 62 AQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRN 121
Query 131 VNHKKFK 137
HKK++
Sbjct 122 SYHKKYR 128
>P0ABE7 Soluble cytochrome b562 [Escherichia coli]
Length=128
Score = 83.2 bits (204), Expect = 2e-25
Identities = 45/127 (35%), Positives = 71/127 (56%), Gaps = 0/127 (0%)
Query 11 KKILGSILLIGSLSVSHLAMAASLQNNMISIATAYSDFSKSSNVKDAETALNKMKLAAID 70
+K L +IL + SL S + AA L++NM ++ K+ N + AL KM+ AA+D
Sbjct 2 RKSLLAILAVSSLVFSSASFAADLEDNMETLNDNLKVIEKADNAAQVKDALTKMRAAALD 61
Query 71 SQKSKPSKLANKPDNSAEVMDYHKGLDQLVAEIDKTNLLVKAGKLDQAKVEGKTLLDIRN 130
+QK+ P KL +K +S E+ D+ G D LV +ID L GK+ +A+ + L RN
Sbjct 62 AQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRN 121
Query 131 VNHKKFK 137
H+K++
Sbjct 122 AYHQKYR 128
>Q8CVG7 Soluble cytochrome b562 [Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC)]
Length=128
Score = 82.0 bits (201), Expect = 5e-25
Identities = 45/127 (35%), Positives = 70/127 (55%), Gaps = 0/127 (0%)
Query 11 KKILGSILLIGSLSVSHLAMAASLQNNMISIATAYSDFSKSSNVKDAETALNKMKLAAID 70
+K L +IL + SL S + AA L++NM ++ K+ N + AL KM+ AA+D
Sbjct 2 RKSLLAILAVSSLVFSSASFAADLEDNMETLNDNLKVVEKADNAVQVKDALTKMRAAALD 61
Query 71 SQKSKPSKLANKPDNSAEVMDYHKGLDQLVAEIDKTNLLVKAGKLDQAKVEGKTLLDIRN 130
+QK+ P KL K +S E+ D+ G D LV +ID L GK+ +A+ + L RN
Sbjct 62 AQKATPPKLEGKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRN 121
Query 131 VNHKKFK 137
H+K++
Sbjct 122 AYHQKYR 128
>P63727 Soluble cytochrome b562 [Salmonella typhimurium (strain
LT2 / SGSC1412 / ATCC 700720)]
Length=128
Score = 79.7 bits (195), Expect = 4e-24
Identities = 44/127 (35%), Positives = 68/127 (54%), Gaps = 0/127 (0%)
Query 11 KKILGSILLIGSLSVSHLAMAASLQNNMISIATAYSDFSKSSNVKDAETALNKMKLAAID 70
+K L +IL + SL AA L++NM + K+ + + + AL KM+ AA+D
Sbjct 2 RKSLLAILAVSSLVFGSAVFAADLEDNMDILNDNLKVVEKTDSAPELKAALTKMRAAALD 61
Query 71 SQKSKPSKLANKPDNSAEVMDYHKGLDQLVAEIDKTNLLVKAGKLDQAKVEGKTLLDIRN 130
+QK+ P KL +K +S E+ D+ G D LV +ID L G + +AK + L RN
Sbjct 62 AQKATPPKLEDKAPDSPEMKDFRHGFDILVGQIDGALKLANEGNVKEAKAAAEALKTTRN 121
Query 131 VNHKKFK 137
HKK++
Sbjct 122 TYHKKYR 128
>P63728 Soluble cytochrome b562 [Salmonella typhi]
Length=128
Score = 79.7 bits (195), Expect = 4e-24
Identities = 44/127 (35%), Positives = 68/127 (54%), Gaps = 0/127 (0%)
Query 11 KKILGSILLIGSLSVSHLAMAASLQNNMISIATAYSDFSKSSNVKDAETALNKMKLAAID 70
+K L +IL + SL AA L++NM + K+ + + + AL KM+ AA+D
Sbjct 2 RKSLLAILAVSSLVFGSAVFAADLEDNMDILNDNLKVVEKTDSAPELKAALTKMRAAALD 61
Query 71 SQKSKPSKLANKPDNSAEVMDYHKGLDQLVAEIDKTNLLVKAGKLDQAKVEGKTLLDIRN 130
+QK+ P KL +K +S E+ D+ G D LV +ID L G + +AK + L RN
Sbjct 62 AQKATPPKLEDKAPDSPEMKDFRHGFDILVGQIDGALKLANEGNVKEAKAAAEALKTTRN 121
Query 131 VNHKKFK 137
HKK++
Sbjct 122 TYHKKYR 128
>Q9X6B1 Probable soluble cytochrome b562 1 [Yersinia pestis]
Length=127
Score = 78.2 bits (191), Expect = 2e-23
Identities = 40/116 (34%), Positives = 67/116 (58%), Gaps = 0/116 (0%)
Query 22 SLSVSHLAMAASLQNNMISIATAYSDFSKSSNVKDAETALNKMKLAAIDSQKSKPSKLAN 81
SL ++ AASLQ++M + S S++ K ++L KM+ AA+D+QK+ P KL
Sbjct 12 SLLITSCTFAASLQDDMNILIANLGIVSSSTDTKVITSSLEKMRNAALDAQKAIPPKLEG 71
Query 82 KPDNSAEVMDYHKGLDQLVAEIDKTNLLVKAGKLDQAKVEGKTLLDIRNVNHKKFK 137
K ++S E+ DY G D L+ +IDKT + G + + K +++IRN H +++
Sbjct 72 KAEDSPEIKDYRHGFDLLIEQIDKTKQWAEEGNIQEVKKSVGEVINIRNTYHSRYR 127
>Q9CMY0 Uncharacterized protein PM0670 [Pasteurella multocida
(strain Pm70)]
Length=124
Score = 62.0 bits (149), Expect = 3e-17
Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 6/122 (5%)
Query 16 SILLIGSLSVSHLAMAASLQNNMISIATAYSDFSKSSNVKDAETALNKMKLAAIDSQKSK 75
SI LIG LSV+ + A+++ M + T + + + +V + + + ++ A S + +
Sbjct 9 SITLIG-LSVA-TGVQANVRAEMNQMKTVAATLTNAKDVAEFQESAKILREIAQQSSEKR 66
Query 76 PSKLANKPDNSAEVMDYHKGLDQLVAEIDKTNLLVKAGKLDQAKVEGKTLLDIRNVNHKK 135
PS + N A+ Y +G+ + + +D+ + L + G LD AK K L DIRNV HKK
Sbjct 67 PSSITN----DADFKGYQEGMKEFITALDEADKLAQEGNLDAAKTAAKKLFDIRNVYHKK 122
Query 136 FK 137
+K
Sbjct 123 YK 124
>Q180X8 Uracil phosphoribosyltransferase [Clostridioides difficile
(strain 630)]
Length=209
Score = 33.1 bits (74), Expect = 3e-06
Identities = 24/58 (41%), Positives = 30/58 (52%), Gaps = 6/58 (10%)
Query 54 VKDAETALNKMKLAAIDSQKSKPSK---LAN---KPDNSAEVMDYHKGLDQLVAEIDK 105
V D A +AAID KSK +K LAN P+ AEV YH +D VA +D+
Sbjct 129 VVDPMLATGGSAVAAIDLLKSKGAKSIKLANLVAAPEGIAEVQKYHDDVDIYVASVDE 186
Score = 15.8 bits (29), Expect = 2.1
Identities = 7/17 (41%), Positives = 10/17 (59%), Gaps = 0/17 (0%)
Query 98 QLVAEIDKTNLLVKAGK 114
++ I KT+ V AGK
Sbjct 54 EIETPIQKTSSKVVAGK 70
Lambda K H a alpha
0.315 0.128 0.335 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 105403
Database: 9049e86781992bd4d94ce7e66dd70a45.SwissProt.fasta
Posted date: May 20, 2024 8:06 PM
Number of letters in database: 1,228
Number of sequences in database: 9
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
