BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 093c53155823f86b264e9f9ecab48e73.SwissProt.fasta
4 sequences; 5,245 total letters
Query= ACIAD3134
Length=108
Score E
Sequences producing significant alignments: (Bits) Value
Q8IVE3 Pleckstrin homology domain-containing family H member 2 [H... 35.0 2e-06
H7BZ55 Ciliary rootlet coiled-coil protein 2 [Homo sapiens] 34.7 3e-06
O51148 Elongation factor Ts [Borreliella burgdorferi (strain ATCC... 33.5 5e-06
Q96Q89 Kinesin-like protein KIF20B [Homo sapiens] 32.0 2e-05
>Q8IVE3 Pleckstrin homology domain-containing family H member
2 [Homo sapiens]
Length=1493
Score = 35.0 bits (79), Expect = 2e-06
Identities = 20/51 (39%), Positives = 34/51 (67%), Gaps = 4/51 (8%)
Query 23 QEAKIKALVKDQAGRLKQLEQANLDALT-QNQELQLKNDNQTVQIQVLQSE 72
QEAKI ++++A ++K+ L+ L +NQ L+L N NQT +I+ +QS+
Sbjct 118 QEAKI---IEEKAAKIKEWVTVKLNELELENQNLRLINQNQTEEIRTMQSK 165
Score = 28.5 bits (62), Expect = 4e-04
Identities = 20/61 (33%), Positives = 34/61 (56%), Gaps = 3/61 (5%)
Query 15 QIAKLKAEQEAKIKALVKDQAGRLKQLEQANLDALTQNQELQLKNDNQTVQIQVLQSERS 74
Q AK+ E+ AKIK V + L +LE NL + QNQ +++ ++Q +Q ++S
Sbjct 118 QEAKIIEEKAAKIKEWVTVKLNEL-ELENQNLRLINQNQTEEIR--TMQSKLQEVQGKKS 174
Query 75 A 75
+
Sbjct 175 S 175
Score = 22.7 bits (47), Expect = 0.035
Identities = 20/63 (32%), Positives = 35/63 (56%), Gaps = 9/63 (14%)
Query 15 QIAKLKAEQEAKIKALVKDQAGRLKQLEQANLDALTQN----QELQLKNDN-QTVQIQVL 69
Q+ K + Q +KI+ L+ A +++QLE+ +DA Q Q++Q+ D + IQ
Sbjct 23 QLMKFRV-QASKIRELL---AEKMQQLERQVIDAERQAEKAFQQVQVMEDKLKAANIQTS 78
Query 70 QSE 72
+SE
Sbjct 79 ESE 81
Score = 16.9 bits (32), Expect = 3.0
Identities = 6/15 (40%), Positives = 11/15 (73%), Gaps = 0/15 (0%)
Query 62 QTVQIQVLQSERSAQ 76
Q ++ QV+ +ER A+
Sbjct 43 QQLERQVIDAERQAE 57
Score = 16.9 bits (32), Expect = 3.0
Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 2/51 (4%)
Query 22 EQEAKIKALVKDQAGRLKQLEQANLDALTQNQELQLKNDNQTVQIQVLQSE 72
+QEA+ KAL +L + D + + EL K +Q + SE
Sbjct 355 QQEAQWKALNSPLGKGNSELSKKEQD--SSSDELNKKFQSQRLDYSSSSSE 403
>H7BZ55 Ciliary rootlet coiled-coil protein 2 [Homo sapiens]
Length=1653
Score = 34.7 bits (78), Expect = 3e-06
Identities = 24/73 (33%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query 11 LTAEQIAKLKAEQEAKIKALVKDQAGRLKQLEQANLDALTQNQELQLKNDNQTVQIQVLQ 70
L A+Q+A K +++ + +A A + Q+E L + + QE++L+ D +Q QV Q
Sbjct 799 LEAQQLAT-KLQEQLEEEARSAGLARQALQVEMEQLQSDWEVQEMKLRQDTVRLQRQVAQ 857
Query 71 SERSAQMFLYGAA 83
ER AQ L A
Sbjct 858 QEREAQRALESQA 870
Score = 24.6 bits (52), Expect = 0.008
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (2%)
Query 11 LTAEQIAKLKAEQEAKIKALVKDQAGRLKQLEQANLDALTQNQELQLKNDNQTVQIQVLQ 70
L AE+ +L +E +AL Q GRL+QLE+ + ++ +Q V++
Sbjct 527 LQAERREELALRRERSCRALETSQ-GRLQQLEEKVSGLREELASVREALSTAQLQRDVVE 585
Query 71 SER 73
SER
Sbjct 586 SER 588
Score = 23.9 bits (50), Expect = 0.014
Identities = 17/49 (35%), Positives = 24/49 (49%), Gaps = 1/49 (2%)
Query 9 KPLTAEQIAKLKAEQEAKIKALVKDQAGR-LKQLEQANLDALTQNQELQ 56
+PL + LK E++ K+Q + L L Q AL QNQ+LQ
Sbjct 1513 EPLRQMEQETLKREEDVARLGAEKEQLDQSLNSLHQEVDGALRQNQQLQ 1561
Score = 22.3 bits (46), Expect = 0.047
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 9/72 (13%)
Query 6 TPQKPLTAEQIAKLKAEQEAKIKALVKDQAGRLKQLEQANLDALTQNQELQLKNDNQTVQ 65
T QK EQ+A+ +QEA Q G L+Q Q DAL++ + L +
Sbjct 725 TCQKQALEEQLAQSLQDQEA--------QMGTLQQALQGK-DALSEERAQLLAKQEALER 775
Query 66 IQVLQSERSAQM 77
L +E +A +
Sbjct 776 QGRLAAEEAADL 787
Score = 21.2 bits (43), Expect = 0.12
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Query 31 VKDQAGRLKQLEQANLDALTQNQELQLKNDNQTVQIQVL--QSERSAQ 76
++D+AG + QL Q DA + LQ + QT+ ++ L Q+E+ A+
Sbjct 292 LRDKAGEMLQL-QGRWDA--EKVALQARLSEQTLLVEKLTEQNEQKAK 336
Score = 20.4 bits (41), Expect = 0.21
Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query 4 ATTPQKPLTAEQIAKLK-AEQEAKIKALVKDQAGRLKQLEQANLDALTQNQELQLKNDNQ 62
A +K EQ+ L+ A +E++ + + G+L + + NL+ Q E+ L+ Q
Sbjct 1458 AAGQEKRRLQEQLETLRQALEESRRHSQGLAKQGKLLEEQLTNLEHRCQKAEVSLEPLRQ 1517
Query 63 TVQIQVLQSERSAQM 77
Q + + E A++
Sbjct 1518 MEQETLKREEDVARL 1532
Score = 19.6 bits (39), Expect = 0.38
Identities = 17/64 (27%), Positives = 31/64 (48%), Gaps = 10/64 (16%)
Query 14 EQIAKLKAEQEAKIKALVKDQAGRLKQLEQ---------ANLDALT-QNQELQLKNDNQT 63
E +A+L+ E+E L +++ QLEQ A +AL + Q L+ + D
Sbjct 875 EALAQLQREKETLSLTLAEEKEVARCQLEQEKELVTKSAAEREALKGEIQSLKQERDESL 934
Query 64 VQIQ 67
+Q++
Sbjct 935 LQLE 938
>O51148 Elongation factor Ts [Borreliella burgdorferi (strain
ATCC 35210 / DSM 4680 / CIP 102532 / B31)]
Length=279
Score = 33.5 bits (75), Expect = 5e-06
Identities = 22/74 (30%), Positives = 44/74 (59%), Gaps = 10/74 (14%)
Query 38 LKQLEQANLDALTQNQELQLKNDNQTVQ--IQV-------LQSERSAQMFLYGAATLAVG 88
+K+L ++ +D+LT +QEL+LKN T++ IQV +QS +++L+G + +G
Sbjct 97 IKELVESGIDSLTTSQELELKNLAATIKENIQVKKIFITKIQSNEFVKIYLHGEQS-KIG 155
Query 89 VVLGFFIASYVYTK 102
V++ + + T+
Sbjct 156 VLVKLKVNDFSKTE 169
>Q96Q89 Kinesin-like protein KIF20B [Homo sapiens]
Length=1820
Score = 32.0 bits (71), Expect = 2e-05
Identities = 27/78 (35%), Positives = 38/78 (49%), Gaps = 15/78 (19%)
Query 14 EQIAKLKAEQEAKIKALVKDQAGRLKQLEQANLDALTQ---------NQELQLKNDNQTV 64
+QI KL+AE + KD+ RLK+ E N D L + +ELQ KN V
Sbjct 1083 QQIEKLQAEVKG-----YKDENNRLKEKEHKNQDDLLKEKETLIQQLKEELQEKNVTLDV 1137
Query 65 QIQ-VLQSERSAQMFLYG 81
QIQ V++ +R+ G
Sbjct 1138 QIQHVVEGKRALSELTQG 1155
Score = 23.9 bits (50), Expect = 0.014
Identities = 12/45 (27%), Positives = 25/45 (56%), Gaps = 3/45 (7%)
Query 15 QIAKLKAE---QEAKIKALVKDQAGRLKQLEQANLDALTQNQELQ 56
++AK K E + ++K + +++LE +N +TQNQ ++
Sbjct 723 ELAKTKGELIKTKEELKKRENESDSLIQELETSNKKIITQNQRIK 767
Score = 19.6 bits (39), Expect = 0.38
Identities = 9/30 (30%), Positives = 17/30 (57%), Gaps = 0/30 (0%)
Query 14 EQIAKLKAEQEAKIKALVKDQAGRLKQLEQ 43
E+ +L A E ++KAL+ + ++EQ
Sbjct 1520 EERDQLVAALEIQLKALISSNVQKDNEIEQ 1549
Score = 18.5 bits (36), Expect = 0.94
Identities = 8/24 (33%), Positives = 16/24 (67%), Gaps = 0/24 (0%)
Query 53 QELQLKNDNQTVQIQVLQSERSAQ 76
Q+L+ + +NQ V+ + Q ER+ +
Sbjct 1342 QQLKEQLNNQKVEEAIQQYERACK 1365
Score = 17.7 bits (34), Expect = 1.7
Identities = 14/57 (25%), Positives = 26/57 (46%), Gaps = 4/57 (7%)
Query 11 LTAEQIAKLKAEQ----EAKIKALVKDQAGRLKQLEQANLDALTQNQELQLKNDNQT 63
+T E+ + + EQ EAK++ + + K E+ N NQ +++N T
Sbjct 1379 MTLEEQEQTQVEQDQVLEAKLEEVERLATELEKWKEKCNDLETKNNQRSNKEHENNT 1435
Score = 16.5 bits (31), Expect = 4.1
Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
Query 38 LKQLEQANLD 47
+K EQANL+
Sbjct 253 IKDYEQANLN 262
Lambda K H a alpha
0.321 0.130 0.350 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 356510
Database: 093c53155823f86b264e9f9ecab48e73.SwissProt.fasta
Posted date: May 20, 2024 8:03 PM
Number of letters in database: 5,245
Number of sequences in database: 4
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
