BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: d722b83e2e65f2dca2138804fd45e94e.SwissProt.fasta
19 sequences; 2,251 total letters
Query= ACIAD3140
Length=142
Score E
Sequences producing significant alignments: (Bits) Value
P52228 Thioredoxin C-3 [Corynebacterium nephridii] 242 8e-88
P0AGG7 Thioredoxin 2 [Shigella flexneri] 102 1e-32
P0AGG5 Thioredoxin 2 [Escherichia coli O6:H1 (strain CFT073 / ATC... 102 1e-32
P0AGG6 Thioredoxin 2 [Escherichia coli O157:H7] 102 1e-32
P0AGG4 Thioredoxin 2 [Escherichia coli (strain K12)] 102 1e-32
Q9RD25 Putative thioredoxin 2 [Streptomyces coelicolor (strain AT... 90.1 9e-28
P57653 Thioredoxin [Buchnera aphidicola subsp. Acyrthosiphon pisu... 85.1 4e-26
P00275 Thioredoxin C-1 [Corynebacterium nephridii] 84.7 5e-26
P0A4L1 Thioredoxin 1 [Nostoc sp. (strain PCC 7120 / SAG 25.82 / U... 83.2 2e-25
P0A4L2 Thioredoxin 1 [Nostoc sp. (strain ATCC 29151 / PCC 7119)] 83.2 2e-25
P12243 Thioredoxin 1 [Synechococcus elongatus (strain ATCC 33912 ... 80.9 2e-24
P43785 Thioredoxin [Haemophilus influenzae (strain ATCC 51907 / D... 80.1 3e-24
P52231 Thioredoxin [Synechocystis sp. (strain PCC 6803 / Kazusa)] 77.0 6e-23
P9WG66 Thioredoxin [Mycobacterium tuberculosis (strain CDC 1551 /... 76.6 1e-22
P0A617 Thioredoxin [Mycobacterium bovis (strain ATCC BAA-935 / AF... 76.6 1e-22
P9WG67 Thioredoxin [Mycobacterium tuberculosis (strain ATCC 25618... 76.6 1e-22
P75512 Thioredoxin [Mycoplasma pneumoniae (strain ATCC 29342 / M1... 75.1 3e-22
P0AA25 Thioredoxin 1 [Escherichia coli (strain K12)] 75.1 3e-22
P0AA28 Thioredoxin 1 [Salmonella typhimurium (strain LT2 / SGSC14... 75.1 3e-22
>P52228 Thioredoxin C-3 [Corynebacterium nephridii]
Length=145
Score = 242 bits (618), Expect = 8e-88
Identities = 115/139 (83%), Positives = 124/139 (89%), Gaps = 0/139 (0%)
Query 1 MIVVCPSCGAKNRVPENKLAEQPQCGQCHAKLLPLAPIELNEQNFSHFITYSDLPVLIDL 60
MI+VC SCGAKNRVPE KLA P CGQCH LLPL PIELNEQNFS+FI+ SDLPVLIDL
Sbjct 1 MIIVCASCGAKNRVPEEKLAVHPNCGQCHQALLPLEPIELNEQNFSNFISNSDLPVLIDL 60
Query 61 WAEWCGPCKMMAPHFAHVAAQNPQVIFAKINTETSPRLSQAFHVRSIPTLVLMNKTTEIA 120
WAEWCGPCKMMAPHFA VA QNP V+FAKI+TE +PRLS AF+VRSIPTLVLMNKTTE+A
Sbjct 61 WAEWCGPCKMMAPHFAQVAKQNPYVVFAKIDTEANPRLSAAFNVRSIPTLVLMNKTTEVA 120
Query 121 RISGALRSTELQQWLDQQL 139
RISGALR+ ELQQWLDQQL
Sbjct 121 RISGALRTLELQQWLDQQL 139
>P0AGG7 Thioredoxin 2 [Shigella flexneri]
Length=139
Score = 102 bits (254), Expect = 1e-32
Identities = 50/140 (36%), Positives = 76/140 (54%), Gaps = 2/140 (1%)
Query 1 MIVVCPSCGAKNRVPENKLAEQPQCGQCHAKLLPLAPIELNEQNFSHFITYSDLPVLIDL 60
M VC C A NR+P++++ + +CG+C L I + + DLPV+ID
Sbjct 1 MNTVCTHCQAINRIPDDRIEDAAKCGRCGHDLFDGEVINATGETLDKLLK-DDLPVVIDF 59
Query 61 WAEWCGPCKMMAPHFAHVAAQ-NPQVIFAKINTETSPRLSQAFHVRSIPTLVLMNKTTEI 119
WA WCGPC+ AP F VA + + +V F K+NTE LS F +RSIPT+++ +
Sbjct 60 WAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRFGIRSIPTIMIFKNGQVV 119
Query 120 ARISGALRSTELQQWLDQQL 139
++GA+ WL++ L
Sbjct 120 DMLNGAVPKAPFDSWLNESL 139
>P0AGG5 Thioredoxin 2 [Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC)]
Length=139
Score = 102 bits (254), Expect = 1e-32
Identities = 50/140 (36%), Positives = 76/140 (54%), Gaps = 2/140 (1%)
Query 1 MIVVCPSCGAKNRVPENKLAEQPQCGQCHAKLLPLAPIELNEQNFSHFITYSDLPVLIDL 60
M VC C A NR+P++++ + +CG+C L I + + DLPV+ID
Sbjct 1 MNTVCTHCQAINRIPDDRIEDAAKCGRCGHDLFDGEVINATGETLDKLLK-DDLPVVIDF 59
Query 61 WAEWCGPCKMMAPHFAHVAAQ-NPQVIFAKINTETSPRLSQAFHVRSIPTLVLMNKTTEI 119
WA WCGPC+ AP F VA + + +V F K+NTE LS F +RSIPT+++ +
Sbjct 60 WAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRFGIRSIPTIMIFKNGQVV 119
Query 120 ARISGALRSTELQQWLDQQL 139
++GA+ WL++ L
Sbjct 120 DMLNGAVPKAPFDSWLNESL 139
>P0AGG6 Thioredoxin 2 [Escherichia coli O157:H7]
Length=139
Score = 102 bits (254), Expect = 1e-32
Identities = 50/140 (36%), Positives = 76/140 (54%), Gaps = 2/140 (1%)
Query 1 MIVVCPSCGAKNRVPENKLAEQPQCGQCHAKLLPLAPIELNEQNFSHFITYSDLPVLIDL 60
M VC C A NR+P++++ + +CG+C L I + + DLPV+ID
Sbjct 1 MNTVCTHCQAINRIPDDRIEDAAKCGRCGHDLFDGEVINATGETLDKLLK-DDLPVVIDF 59
Query 61 WAEWCGPCKMMAPHFAHVAAQ-NPQVIFAKINTETSPRLSQAFHVRSIPTLVLMNKTTEI 119
WA WCGPC+ AP F VA + + +V F K+NTE LS F +RSIPT+++ +
Sbjct 60 WAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRFGIRSIPTIMIFKNGQVV 119
Query 120 ARISGALRSTELQQWLDQQL 139
++GA+ WL++ L
Sbjct 120 DMLNGAVPKAPFDSWLNESL 139
>P0AGG4 Thioredoxin 2 [Escherichia coli (strain K12)]
Length=139
Score = 102 bits (254), Expect = 1e-32
Identities = 50/140 (36%), Positives = 76/140 (54%), Gaps = 2/140 (1%)
Query 1 MIVVCPSCGAKNRVPENKLAEQPQCGQCHAKLLPLAPIELNEQNFSHFITYSDLPVLIDL 60
M VC C A NR+P++++ + +CG+C L I + + DLPV+ID
Sbjct 1 MNTVCTHCQAINRIPDDRIEDAAKCGRCGHDLFDGEVINATGETLDKLLK-DDLPVVIDF 59
Query 61 WAEWCGPCKMMAPHFAHVAAQ-NPQVIFAKINTETSPRLSQAFHVRSIPTLVLMNKTTEI 119
WA WCGPC+ AP F VA + + +V F K+NTE LS F +RSIPT+++ +
Sbjct 60 WAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRFGIRSIPTIMIFKNGQVV 119
Query 120 ARISGALRSTELQQWLDQQL 139
++GA+ WL++ L
Sbjct 120 DMLNGAVPKAPFDSWLNESL 139
>Q9RD25 Putative thioredoxin 2 [Streptomyces coelicolor (strain
ATCC BAA-471 / A3(2) / M145)]
Length=134
Score = 90.1 bits (222), Expect = 9e-28
Identities = 41/100 (41%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Query 38 IELNEQNFSHFITYSDLPVLIDLWAEWCGPCKMMAPHFAHVAAQNPQVIFAKINTETSPR 97
+EL ++NF +T ++ VLID WAEWCGPCK P + A NP ++F K++TE P
Sbjct 5 VELTKENFDQTVTDNEF-VLIDFWAEWCGPCKQFGPVYEKAAEANPDLVFGKVDTEAQPE 63
Query 98 LSQAFHVRSIPTLVLMNKTTEIARISGALRSTELQQWLDQ 137
L+QAF + SIPTL+++ + + GAL L + Q
Sbjct 64 LAQAFGISSIPTLMIVREQVAVFAQPGALPEAALTDVIGQ 103
>P57653 Thioredoxin [Buchnera aphidicola subsp. Acyrthosiphon
pisum (strain APS)]
Length=108
Score = 85.1 bits (209), Expect = 4e-26
Identities = 39/104 (38%), Positives = 65/104 (63%), Gaps = 1/104 (1%)
Query 38 IELNEQNFSHFITYSDLPVLIDLWAEWCGPCKMMAPHFAHVAAQ-NPQVIFAKINTETSP 96
IEL +QNF + S L+D WA+WC PCK++AP ++ + + +VI K+N E +P
Sbjct 5 IELTDQNFEEQVLNSKSFFLVDFWAQWCNPCKILAPILEEISKEYSNKVIVGKLNIEENP 64
Query 97 RLSQAFHVRSIPTLVLMNKTTEIARISGALRSTELQQWLDQQLH 140
+ + +RSIPTL+L N + +A GA+ EL+++LD+ ++
Sbjct 65 NTAPVYSIRSIPTLLLFNNSEVLATKVGAVSKLELKEFLDENIN 108
>P00275 Thioredoxin C-1 [Corynebacterium nephridii]
Length=105
Score = 84.7 bits (208), Expect = 5e-26
Identities = 40/101 (40%), Positives = 59/101 (58%), Gaps = 1/101 (1%)
Query 36 APIELNEQNFSHFITYSDLPVLIDLWAEWCGPCKMMAPHFAHVAAQNP-QVIFAKINTET 94
A ++++ NF + S PV++D WAEWCGPCKM+AP +A + QV AK+N +
Sbjct 1 ATVKVDNSNFQSDVLQSSEPVVVDFWAEWCGPCKMIAPALDEIATEMAGQVKIAKVNIDE 60
Query 95 SPRLSQAFHVRSIPTLVLMNKTTEIARISGALRSTELQQWL 135
+P L+ F VRSIPTL++ A + GA + L W+
Sbjct 61 NPELAAQFGVRSIPTLLMFKDGELAANMVGAAPKSRLADWI 101
>P0A4L1 Thioredoxin 1 [Nostoc sp. (strain PCC 7120 / SAG 25.82
/ UTEX 2576)]
Length=107
Score = 83.2 bits (204), Expect = 2e-25
Identities = 37/105 (35%), Positives = 64/105 (61%), Gaps = 1/105 (1%)
Query 36 APIELNEQNFSHFITYSDLPVLIDLWAEWCGPCKMMAPHFAHVAAQ-NPQVIFAKINTET 94
A ++ + F + SD+PVL+D WA WCGPC+M+AP +A Q ++ K+NT+
Sbjct 3 AAAQVTDSTFKQEVLDSDVPVLVDFWAPWCGPCRMVAPVVDEIAQQYEGKIKVVKVNTDE 62
Query 95 SPRLSQAFHVRSIPTLVLMNKTTEIARISGALRSTELQQWLDQQL 139
+P+++ + +RSIPTL++ ++ + GA+ T L Q L++ L
Sbjct 63 NPQVASQYGIRSIPTLMIFKGGQKVDMVVGAVPKTTLSQTLEKHL 107
>P0A4L2 Thioredoxin 1 [Nostoc sp. (strain ATCC 29151 / PCC 7119)]
Length=107
Score = 83.2 bits (204), Expect = 2e-25
Identities = 37/105 (35%), Positives = 64/105 (61%), Gaps = 1/105 (1%)
Query 36 APIELNEQNFSHFITYSDLPVLIDLWAEWCGPCKMMAPHFAHVAAQ-NPQVIFAKINTET 94
A ++ + F + SD+PVL+D WA WCGPC+M+AP +A Q ++ K+NT+
Sbjct 3 AAAQVTDSTFKQEVLDSDVPVLVDFWAPWCGPCRMVAPVVDEIAQQYEGKIKVVKVNTDE 62
Query 95 SPRLSQAFHVRSIPTLVLMNKTTEIARISGALRSTELQQWLDQQL 139
+P+++ + +RSIPTL++ ++ + GA+ T L Q L++ L
Sbjct 63 NPQVASQYGIRSIPTLMIFKGGQKVDMVVGAVPKTTLSQTLEKHL 107
>P12243 Thioredoxin 1 [Synechococcus elongatus (strain ATCC 33912
/ PCC 7942 / FACHB-805)]
Length=107
Score = 80.9 bits (198), Expect = 2e-24
Identities = 37/101 (37%), Positives = 59/101 (58%), Gaps = 1/101 (1%)
Query 40 LNEQNFSHFITYSDLPVLIDLWAEWCGPCKMMAPHFAHVAAQ-NPQVIFAKINTETSPRL 98
+ + F + S +PVL+D WA WCGPC+M+AP +A Q + QV K+NT+ +P +
Sbjct 7 VTDATFKQEVLESSIPVLVDFWAPWCGPCRMVAPVVDEIAQQYSDQVKVVKVNTDENPSV 66
Query 99 SQAFHVRSIPTLVLMNKTTEIARISGALRSTELQQWLDQQL 139
+ + +RSIPTL++ + + GA+ T L LD+ L
Sbjct 67 ASQYGIRSIPTLMIFKDGQRVDTVVGAVPKTTLANTLDKHL 107
>P43785 Thioredoxin [Haemophilus influenzae (strain ATCC 51907
/ DSM 11121 / KW20 / Rd)]
Length=107
Score = 80.1 bits (196), Expect = 3e-24
Identities = 38/103 (37%), Positives = 61/103 (59%), Gaps = 1/103 (1%)
Query 38 IELNEQNFSHFITYSDLPVLIDLWAEWCGPCKMMAPHFAHVAAQ-NPQVIFAKINTETSP 96
+ +N+ +F + SD+P+L+D WA WCGPCKM+AP +A + +V K+N + +
Sbjct 5 LHINDADFESVVVNSDIPILLDFWAPWCGPCKMIAPVLDELAPEFAGKVKIVKMNVDDNQ 64
Query 97 RLSQAFHVRSIPTLVLMNKTTEIARISGALRSTELQQWLDQQL 139
F VRSIPTL+L+ +A GAL T+L +++Q +
Sbjct 65 ATPAQFGVRSIPTLLLIKNGQVVATQVGALPKTQLANFINQHI 107
>P52231 Thioredoxin [Synechocystis sp. (strain PCC 6803 / Kazusa)]
Length=107
Score = 77.0 bits (188), Expect = 6e-23
Identities = 35/102 (34%), Positives = 61/102 (60%), Gaps = 1/102 (1%)
Query 39 ELNEQNFSHFITYSDLPVLIDLWAEWCGPCKMMAPHFAHVAAQ-NPQVIFAKINTETSPR 97
++++ +F + S+LPVL+D WA WCGPC+M+AP ++ Q +V K+NT+ +P
Sbjct 6 QVSDASFKEDVLDSELPVLVDFWAPWCGPCRMVAPVVDEISQQYEGKVKVVKLNTDENPN 65
Query 98 LSQAFHVRSIPTLVLMNKTTEIARISGALRSTELQQWLDQQL 139
+ + +RSIPTL++ + + GA+ T L L++ L
Sbjct 66 TASQYGIRSIPTLMIFKGGQRVDMVVGAVPKTTLASTLEKYL 107
>P9WG66 Thioredoxin [Mycobacterium tuberculosis (strain CDC 1551
/ Oshkosh)]
Length=116
Score = 76.6 bits (187), Expect = 1e-22
Identities = 36/91 (40%), Positives = 56/91 (62%), Gaps = 1/91 (1%)
Query 36 APIELNEQNFSHFITYSDLPVLIDLWAEWCGPCKMMAPHFAHVAAQN-PQVIFAKINTET 94
A I++ + +F+ + S+ PVL+D WA WCGPCKM+AP +A + + AK++ +T
Sbjct 8 ATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDT 67
Query 95 SPRLSQAFHVRSIPTLVLMNKTTEIARISGA 125
+P ++ F V SIPTL+L + RI GA
Sbjct 68 NPETARNFQVVSIPTLILFKDGQPVKRIVGA 98
>P0A617 Thioredoxin [Mycobacterium bovis (strain ATCC BAA-935
/ AF2122/97)]
Length=116
Score = 76.6 bits (187), Expect = 1e-22
Identities = 36/91 (40%), Positives = 56/91 (62%), Gaps = 1/91 (1%)
Query 36 APIELNEQNFSHFITYSDLPVLIDLWAEWCGPCKMMAPHFAHVAAQN-PQVIFAKINTET 94
A I++ + +F+ + S+ PVL+D WA WCGPCKM+AP +A + + AK++ +T
Sbjct 8 ATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDT 67
Query 95 SPRLSQAFHVRSIPTLVLMNKTTEIARISGA 125
+P ++ F V SIPTL+L + RI GA
Sbjct 68 NPETARNFQVVSIPTLILFKDGQPVKRIVGA 98
>P9WG67 Thioredoxin [Mycobacterium tuberculosis (strain ATCC 25618
/ H37Rv)]
Length=116
Score = 76.6 bits (187), Expect = 1e-22
Identities = 36/91 (40%), Positives = 56/91 (62%), Gaps = 1/91 (1%)
Query 36 APIELNEQNFSHFITYSDLPVLIDLWAEWCGPCKMMAPHFAHVAAQN-PQVIFAKINTET 94
A I++ + +F+ + S+ PVL+D WA WCGPCKM+AP +A + + AK++ +T
Sbjct 8 ATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDT 67
Query 95 SPRLSQAFHVRSIPTLVLMNKTTEIARISGA 125
+P ++ F V SIPTL+L + RI GA
Sbjct 68 NPETARNFQVVSIPTLILFKDGQPVKRIVGA 98
>P75512 Thioredoxin [Mycoplasma pneumoniae (strain ATCC 29342
/ M129 / Subtype 1)]
Length=102
Score = 75.1 bits (183), Expect = 3e-22
Identities = 34/86 (40%), Positives = 51/86 (59%), Gaps = 0/86 (0%)
Query 52 SDLPVLIDLWAEWCGPCKMMAPHFAHVAAQNPQVIFAKINTETSPRLSQAFHVRSIPTLV 111
S+ V+ID WAEWCGPCK+ P FA A++ V FAK+N + ++ A+ + S+PT+V
Sbjct 17 SNNKVIIDFWAEWCGPCKITGPEFAKAASEVSTVAFAKVNVDEQTDIAAAYKITSLPTIV 76
Query 112 LMNKTTEIARISGALRSTELQQWLDQ 137
L K E R G + ++ Q + Q
Sbjct 77 LFEKGQEKHRAIGFMPKAKIVQLVSQ 102
>P0AA25 Thioredoxin 1 [Escherichia coli (strain K12)]
Length=109
Score = 75.1 bits (183), Expect = 3e-22
Identities = 37/103 (36%), Positives = 59/103 (57%), Gaps = 1/103 (1%)
Query 38 IELNEQNFSHFITYSDLPVLIDLWAEWCGPCKMMAPHFAHVAAQ-NPQVIFAKINTETSP 96
I L + +F + +D +L+D WAEWCGPCKM+AP +A + ++ AK+N + +P
Sbjct 6 IHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNP 65
Query 97 RLSQAFHVRSIPTLVLMNKTTEIARISGALRSTELQQWLDQQL 139
+ + +R IPTL+L A GAL +L+++LD L
Sbjct 66 GTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 108
>P0AA28 Thioredoxin 1 [Salmonella typhimurium (strain LT2 / SGSC1412
/ ATCC 700720)]
Length=109
Score = 75.1 bits (183), Expect = 3e-22
Identities = 37/103 (36%), Positives = 59/103 (57%), Gaps = 1/103 (1%)
Query 38 IELNEQNFSHFITYSDLPVLIDLWAEWCGPCKMMAPHFAHVAAQ-NPQVIFAKINTETSP 96
I L + +F + +D +L+D WAEWCGPCKM+AP +A + ++ AK+N + +P
Sbjct 6 IHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNP 65
Query 97 RLSQAFHVRSIPTLVLMNKTTEIARISGALRSTELQQWLDQQL 139
+ + +R IPTL+L A GAL +L+++LD L
Sbjct 66 GTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 108
Lambda K H a alpha
0.326 0.135 0.437 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 177016
Database: d722b83e2e65f2dca2138804fd45e94e.SwissProt.fasta
Posted date: May 20, 2024 7:36 PM
Number of letters in database: 2,251
Number of sequences in database: 19
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
