Comparative Genomics

ACIAD3175 / TrEMBL Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: dd686ea03f4377403fbc6cb1553ab37f.TrEMBL.fasta
           10 sequences; 1,053 total letters



Query= ACIAD3175

Length=94
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q6F7V2 Uncharacterized protein [Acinetobacter baylyi (strain ATCC...  193     2e-70
A0A7G2SI54 Uncharacterized protein [Acinetobacter sp]                 193     2e-70
A0A3A8EDC0 Uncharacterized protein [Acinetobacter guerrae]            125     3e-43
A0A009ZI88 Pyocin activator PrtN family protein [Acinetobacter sp...  121     8e-42
A0A7T9UKF9 Uncharacterized protein [Acinetobacter ursingii]           121     1e-41
N9C4B3 Uncharacterized protein [Acinetobacter ursingii ANC 3649]      120     4e-41
A0A427PTS8 Uncharacterized protein [Acinetobacter sp. FDAARGOS_515]   120     4e-41
A0A1G6GK40 Type VI secretion system (T6SS), amidase immunity prot...  51.2    8e-14
A0A2U3N044 Uncharacterized protein [Acinetobacter stercoris]          47.8    1e-12
N8Y4X4 Uncharacterized protein [Acinetobacter gerneri DSM 14967 =...  40.8    7e-10


>Q6F7V2 Uncharacterized protein [Acinetobacter baylyi (strain 
ATCC 33305 / BD413 / ADP1)]
Length=93

 Score = 193 bits (491),  Expect = 2e-70
 Identities = 93/93 (100%), Positives = 93/93 (100%), Gaps = 0/93 (0%)

Query  1   MAYKIWQPSPAQYEDYRALLCLAIQNQQQIDQKQILEEMDKIHKHSYPEYALQKPKFKQR  60
           MAYKIWQPSPAQYEDYRALLCLAIQNQQQIDQKQILEEMDKIHKHSYPEYALQKPKFKQR
Sbjct  1   MAYKIWQPSPAQYEDYRALLCLAIQNQQQIDQKQILEEMDKIHKHSYPEYALQKPKFKQR  60

Query  61  YARKVWSQFQQLGQTEQNEARSSIMMCEKLLIQ  93
           YARKVWSQFQQLGQTEQNEARSSIMMCEKLLIQ
Sbjct  61  YARKVWSQFQQLGQTEQNEARSSIMMCEKLLIQ  93


>A0A7G2SI54 Uncharacterized protein [Acinetobacter sp]
Length=93

 Score = 193 bits (491),  Expect = 2e-70
 Identities = 93/93 (100%), Positives = 93/93 (100%), Gaps = 0/93 (0%)

Query  1   MAYKIWQPSPAQYEDYRALLCLAIQNQQQIDQKQILEEMDKIHKHSYPEYALQKPKFKQR  60
           MAYKIWQPSPAQYEDYRALLCLAIQNQQQIDQKQILEEMDKIHKHSYPEYALQKPKFKQR
Sbjct  1   MAYKIWQPSPAQYEDYRALLCLAIQNQQQIDQKQILEEMDKIHKHSYPEYALQKPKFKQR  60

Query  61  YARKVWSQFQQLGQTEQNEARSSIMMCEKLLIQ  93
           YARKVWSQFQQLGQTEQNEARSSIMMCEKLLIQ
Sbjct  61  YARKVWSQFQQLGQTEQNEARSSIMMCEKLLIQ  93


>A0A3A8EDC0 Uncharacterized protein [Acinetobacter guerrae]
Length=111

 Score = 125 bits (315),  Expect = 3e-43
 Identities = 59/91 (65%), Positives = 70/91 (77%), Gaps = 0/91 (0%)

Query  1    MAYKIWQPSPAQYEDYRALLCLAIQNQQQIDQKQILEEMDKIHKHSYPEYALQKPKFKQR  60
            +AYKIWQPS AQYEDYRALLCL IQ    I++ QI  EM+K+ KHSYP+YAL KP FK R
Sbjct  19   IAYKIWQPSQAQYEDYRALLCLVIQKDDLIEKDQIFTEMEKVQKHSYPDYALHKPTFKAR  78

Query  61   YARKVWSQFQQLGQTEQNEARSSIMMCEKLL  91
            +ARKV+SQFQ L Q +Q +AR S+  CE LL
Sbjct  79   FARKVFSQFQGLKQVDQQQARKSLKDCENLL  109


>A0A009ZI88 Pyocin activator PrtN family protein [Acinetobacter 
sp. 479375]
Length=95

 Score = 121 bits (304),  Expect = 8e-42
 Identities = 57/91 (63%), Positives = 67/91 (74%), Gaps = 0/91 (0%)

Query  1   MAYKIWQPSPAQYEDYRALLCLAIQNQQQIDQKQILEEMDKIHKHSYPEYALQKPKFKQR  60
           +AYKIWQPSPAQYEDYRAL CL IQ     ++ QI  EM+K+ KHSYP+YAL KP FK R
Sbjct  2   IAYKIWQPSPAQYEDYRALFCLVIQKDDLTEKDQIFIEMEKVQKHSYPDYALHKPTFKTR  61

Query  61  YARKVWSQFQQLGQTEQNEARSSIMMCEKLL  91
           +AR V+SQFQ L   EQ +AR S+  CE LL
Sbjct  62  FARLVFSQFQDLKLAEQQQARKSLKNCENLL  92


>A0A7T9UKF9 Uncharacterized protein [Acinetobacter ursingii]
Length=112

 Score = 121 bits (304),  Expect = 1e-41
 Identities = 57/91 (63%), Positives = 67/91 (74%), Gaps = 0/91 (0%)

Query  1    MAYKIWQPSPAQYEDYRALLCLAIQNQQQIDQKQILEEMDKIHKHSYPEYALQKPKFKQR  60
            +AYKIWQPSPAQYEDYRAL CL IQ     ++ QI  EM+K+ KHSYP+YAL KP FK R
Sbjct  19   IAYKIWQPSPAQYEDYRALFCLVIQKDDLTEKDQIFIEMEKVQKHSYPDYALHKPTFKTR  78

Query  61   YARKVWSQFQQLGQTEQNEARSSIMMCEKLL  91
            +AR V+SQFQ L   EQ +AR S+  CE LL
Sbjct  79   FARLVFSQFQDLKLAEQQQARKSLKNCENLL  109


>N9C4B3 Uncharacterized protein [Acinetobacter ursingii ANC 3649]
Length=112

 Score = 120 bits (301),  Expect = 4e-41
 Identities = 56/91 (62%), Positives = 67/91 (74%), Gaps = 0/91 (0%)

Query  1    MAYKIWQPSPAQYEDYRALLCLAIQNQQQIDQKQILEEMDKIHKHSYPEYALQKPKFKQR  60
            +AYKIWQPSPAQYEDYRAL CL IQ     ++ QI  EM+K+ KHSYP+YAL KP FK R
Sbjct  19   IAYKIWQPSPAQYEDYRALFCLVIQKDDLTEKDQIFMEMEKVQKHSYPDYALHKPTFKTR  78

Query  61   YARKVWSQFQQLGQTEQNEARSSIMMCEKLL  91
            +AR V+S+FQ L   EQ +AR S+  CE LL
Sbjct  79   FARLVFSEFQDLKLAEQQQARKSLKDCENLL  109


>A0A427PTS8 Uncharacterized protein [Acinetobacter sp. FDAARGOS_515]
Length=112

 Score = 120 bits (301),  Expect = 4e-41
 Identities = 56/91 (62%), Positives = 67/91 (74%), Gaps = 0/91 (0%)

Query  1    MAYKIWQPSPAQYEDYRALLCLAIQNQQQIDQKQILEEMDKIHKHSYPEYALQKPKFKQR  60
            +AYKIWQPSPAQYEDYRAL CL IQ     ++ QI  EM+K+ KHSYP+YAL KP FK R
Sbjct  19   IAYKIWQPSPAQYEDYRALFCLVIQKDDLTEKDQIFMEMEKVQKHSYPDYALHKPTFKTR  78

Query  61   YARKVWSQFQQLGQTEQNEARSSIMMCEKLL  91
            +AR V+S+FQ L   EQ +AR S+  CE LL
Sbjct  79   FARLVFSEFQDLKLAEQQQARKSLKDCENLL  109


>A0A1G6GK40 Type VI secretion system (T6SS), amidase immunity 
protein [Acinetobacter boissieri]
Length=116

 Score = 51.2 bits (121),  Expect = 8e-14
 Identities = 24/85 (28%), Positives = 49/85 (58%), Gaps = 1/85 (1%)

Query  8    PSPAQYEDYRALLCLAIQNQQ-QIDQKQILEEMDKIHKHSYPEYALQKPKFKQRYARKVW  66
            PS  +   +R  +C  I++++ Q + K+++E  +K+ +   P+YAL KPK    +A ++ 
Sbjct  29   PSEEEKAYHRIAMCYVIEHREIQANNKELIEFFNKVAQGGVPDYALNKPKIYDSFANELI  88

Query  67   SQFQQLGQTEQNEARSSIMMCEKLL  91
              + +L   +Q E +SS   C+++L
Sbjct  89   DYYLKLSPEKQQEVKSSRENCDRIL  113


>A0A2U3N044 Uncharacterized protein [Acinetobacter stercoris]
Length=96

 Score = 47.8 bits (112),  Expect = 1e-12
 Identities = 22/85 (26%), Positives = 44/85 (52%), Gaps = 1/85 (1%)

Query  8   PSPAQYEDYRALLCLAIQNQQQI-DQKQILEEMDKIHKHSYPEYALQKPKFKQRYARKVW  66
           P  A+ + + A+ C  I+ +  + +++ +L        +S P YA  KPKF ++Y + + 
Sbjct  12  PDSAEKKQHNAIFCNVIRKENAVLNEQDLLYSFQFYFNNSTPMYAYHKPKFYEKYGQHII  71

Query  67  SQFQQLGQTEQNEARSSIMMCEKLL  91
             + +L   +QN A+S   +C  +L
Sbjct  72  QNYLKLSPQQQNRAKSDFDICLSML  96


>N8Y4X4 Uncharacterized protein [Acinetobacter gerneri DSM 14967 
= CIP 107464 = MTCC 9824]
Length=113

 Score = 40.8 bits (94),  Expect = 7e-10
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 3/89 (3%)

Query  6    WQPSPAQYE--DYRALLCLAIQNQQQIDQKQILEEMDKIH-KHSYPEYALQKPKFKQRYA  62
            WQ +P   +   ++A+ C  I+    + Q + L E    +  +S P YA  KPKF Q YA
Sbjct  22   WQNTPNSQDRRKHQAIFCNVIRQPNTVLQSEALFESFAFYFNNSTPTYAYHKPKFYQNYA  81

Query  63   RKVWSQFQQLGQTEQNEARSSIMMCEKLL  91
             K+  ++       Q +A+ S   C  +L
Sbjct  82   HKLVERYLNEFPQNQLKAQQSFDQCMLIL  110



Lambda      K        H        a         alpha
   0.325    0.134    0.408    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 56910


  Database: dd686ea03f4377403fbc6cb1553ab37f.TrEMBL.fasta
    Posted date:  Jun 3, 2024  5:20 PM
  Number of letters in database: 1,053
  Number of sequences in database:  10



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40