BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 217e072fbfc8ee6bbe4bfdbcca1030cc.SwissProt.fasta
           4 sequences; 349 total letters



Query= ACIAD3183

Length=80
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

P0ADW8 Uncharacterized protein YheV [Escherichia coli (strain K12)]   43.9    4e-12
P0ADW9 Uncharacterized protein YheV [Escherichia coli O6:H1 (stra...  43.9    4e-12
P0ADX0 Uncharacterized protein YheV [Escherichia coli O157:H7]        43.9    4e-12
B2V5T9 Transcriptional repressor NrdR [Sulfurihydrogenibium sp. (...  30.8    1e-06


>P0ADW8 Uncharacterized protein YheV [Escherichia coli (strain 
K12)]
Length=66

 Score = 43.9 bits (102),  Expect = 4e-12
 Identities = 21/51 (41%), Positives = 31/51 (61%), Gaps = 1/51 (2%)

Query  10  AMKRRFIAGAKCPKCGAMDRVVMLTTAEHEWIECIECDYTENRPTHIEAPD  60
           A+++RFIAGAKCP C A D + M      + +EC++C + + R    EA D
Sbjct  2   AIRKRFIAGAKCPACQAQDSMAMWRENNIDIVECVKCGH-QMREADKEARD  51


>P0ADW9 Uncharacterized protein YheV [Escherichia coli O6:H1 (strain 
CFT073 / ATCC 700928 / UPEC)]
Length=66

 Score = 43.9 bits (102),  Expect = 4e-12
 Identities = 21/51 (41%), Positives = 31/51 (61%), Gaps = 1/51 (2%)

Query  10  AMKRRFIAGAKCPKCGAMDRVVMLTTAEHEWIECIECDYTENRPTHIEAPD  60
           A+++RFIAGAKCP C A D + M      + +EC++C + + R    EA D
Sbjct  2   AIRKRFIAGAKCPACQAQDSMAMWRENNIDIVECVKCGH-QMREADKEARD  51


>P0ADX0 Uncharacterized protein YheV [Escherichia coli O157:H7]
Length=66

 Score = 43.9 bits (102),  Expect = 4e-12
 Identities = 21/51 (41%), Positives = 31/51 (61%), Gaps = 1/51 (2%)

Query  10  AMKRRFIAGAKCPKCGAMDRVVMLTTAEHEWIECIECDYTENRPTHIEAPD  60
           A+++RFIAGAKCP C A D + M      + +EC++C + + R    EA D
Sbjct  2   AIRKRFIAGAKCPACQAQDSMAMWRENNIDIVECVKCGH-QMREADKEARD  51


>B2V5T9 Transcriptional repressor NrdR [Sulfurihydrogenibium sp. 
(strain YO3AOP1)]
Length=151

 Score = 30.8 bits (68),  Expect = 1e-06
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 6/51 (12%)

Query  20  KCPKCGAMDRVVMLTTAEHEWI------ECIECDYTENRPTHIEAPDVPTV  64
           KCPKCG+++  V+ T    E +      EC+ C Y       IE   +  +
Sbjct  2   KCPKCGSLNDKVLETRQSKEGVVIKRRRECLNCGYRFTTYERIEEEHIEVI  52



Lambda      K        H        a         alpha
   0.327    0.137    0.437    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 18240


  Database: 217e072fbfc8ee6bbe4bfdbcca1030cc.SwissProt.fasta
    Posted date:  May 20, 2024  6:37 PM
  Number of letters in database: 349
  Number of sequences in database:  4



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40