BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 9fb09996abb9aeb0d8d854b0584d7c65.SwissProt.fasta
           6 sequences; 495 total letters



Query= ACIAD3672

Length=85
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

P64485 UPF0410 protein YeaQ [Escherichia coli (strain K12)]           58.9    1e-17
P64486 UPF0410 protein YeaQ [Escherichia coli O6:H1 (strain CFT07...  58.9    1e-17
P64487 UPF0410 protein YeaQ [Escherichia coli O157:H7]                58.9    1e-17
P58767 UPF0410 protein YmgE [Escherichia coli O127:H6 (strain E23...  56.2    1e-16
P76011 UPF0410 protein YmgE [Escherichia coli (strain K12)]           53.5    2e-15
O32282 UPF0410 protein YwzA [Bacillus subtilis (strain 168)]          43.1    2e-11


>P64485 UPF0410 protein YeaQ [Escherichia coli (strain K12)]
Length=82

 Score = 58.9 bits (141),  Expect = 1e-17
 Identities = 30/76 (39%), Positives = 46/76 (61%), Gaps = 2/76 (3%)

Query  8   IVIGFIAGLIARAIHPGNDKAGFIVTTLLGIAGSLLATYGGRFLGLYPEN--SSAGFIAS  65
           I+ G IAG++A+ I PG D  GF +T LLGI G+++  +     G    +  +   F+ +
Sbjct  7   IIFGLIAGILAKWIMPGKDGGGFFMTILLGIVGAVVGGWISTLFGFGKVDGFNFGSFVVA  66

Query  66  VIGAIIILFIYNLISN  81
           VIGAI++LFIY  I +
Sbjct  67  VIGAIVVLFIYRKIKS  82


>P64486 UPF0410 protein YeaQ [Escherichia coli O6:H1 (strain CFT073 
/ ATCC 700928 / UPEC)]
Length=82

 Score = 58.9 bits (141),  Expect = 1e-17
 Identities = 30/76 (39%), Positives = 46/76 (61%), Gaps = 2/76 (3%)

Query  8   IVIGFIAGLIARAIHPGNDKAGFIVTTLLGIAGSLLATYGGRFLGLYPEN--SSAGFIAS  65
           I+ G IAG++A+ I PG D  GF +T LLGI G+++  +     G    +  +   F+ +
Sbjct  7   IIFGLIAGILAKWIMPGKDGGGFFMTILLGIVGAVVGGWISTLFGFGKVDGFNFGSFVVA  66

Query  66  VIGAIIILFIYNLISN  81
           VIGAI++LFIY  I +
Sbjct  67  VIGAIVVLFIYRKIKS  82


>P64487 UPF0410 protein YeaQ [Escherichia coli O157:H7]
Length=82

 Score = 58.9 bits (141),  Expect = 1e-17
 Identities = 30/76 (39%), Positives = 46/76 (61%), Gaps = 2/76 (3%)

Query  8   IVIGFIAGLIARAIHPGNDKAGFIVTTLLGIAGSLLATYGGRFLGLYPEN--SSAGFIAS  65
           I+ G IAG++A+ I PG D  GF +T LLGI G+++  +     G    +  +   F+ +
Sbjct  7   IIFGLIAGILAKWIMPGKDGGGFFMTILLGIVGAVVGGWISTLFGFGKVDGFNFGSFVVA  66

Query  66  VIGAIIILFIYNLISN  81
           VIGAI++LFIY  I +
Sbjct  67  VIGAIVVLFIYRKIKS  82


>P58767 UPF0410 protein YmgE [Escherichia coli O127:H6 (strain 
E2348/69 / EPEC)]
Length=84

 Score = 56.2 bits (134),  Expect = 1e-16
 Identities = 28/82 (34%), Positives = 48/82 (59%), Gaps = 3/82 (4%)

Query  4   LIVAIVIGFIAGLIARAIHPGNDKAGFIVTTLLGIAGSLLATYGGRFLGLYPENSS---A  60
           +I  I+ G IAG+IA+ I PG D  GF +T +LGI G+++  +     G+    S     
Sbjct  3   IIAWIIFGLIAGIIAKLIMPGRDGGGFFLTCILGIVGAVVGGWLATMFGIGGSISGFNLH  62

Query  61  GFIASVIGAIIILFIYNLISNK  82
            F+ +V+GAI++L ++ L+  +
Sbjct  63  SFLVAVVGAILVLGVFRLLQRE  84


>P76011 UPF0410 protein YmgE [Escherichia coli (strain K12)]
Length=84

 Score = 53.5 bits (127),  Expect = 2e-15
 Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 3/79 (4%)

Query  4   LIVAIVIGFIAGLIARAIHPGNDKAGFIVTTLLGIAGSLLATYGGRFLGLYPENSS---A  60
           +I  I+   IAG+IA+ I PG D  GF +T +LGI G+++  +     G+    S     
Sbjct  3   IIAWIIFDLIAGIIAKLIMPGRDGGGFFLTCILGIVGAVVGGWLATMFGIGGSISGFNLH  62

Query  61  GFIASVIGAIIILFIYNLI  79
            F+ +V+GAI++L I+ L+
Sbjct  63  SFLVAVVGAILVLGIFRLL  81


>O32282 UPF0410 protein YwzA [Bacillus subtilis (strain 168)]
Length=81

 Score = 43.1 bits (100),  Expect = 2e-11
 Identities = 29/82 (35%), Positives = 45/82 (55%), Gaps = 10/82 (12%)

Query  3   SLIVAIVIGFIAGLIARAIHPGNDKAGFIVTTLLG--IAGSLLATYGGRFLGLYPENSSA  60
           SLIVAI+IG++  L  +   PG    G ++  L+G  I   LL T+G       P  +  
Sbjct  6   SLIVAIIIGWLGSLFVKGDMPGG-IIGSMIAGLIGAWIGHGLLGTWG-------PHLAGF  57

Query  61  GFIASVIGAIIILFIYNLISNK  82
             I +VIGA I++F+ +L++ K
Sbjct  58  AIIPAVIGAAIVVFLVSLLTRK  79



Lambda      K        H        a         alpha
   0.335    0.151    0.454    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 25146


  Database: 9fb09996abb9aeb0d8d854b0584d7c65.SwissProt.fasta
    Posted date:  May 20, 2024  8:25 PM
  Number of letters in database: 495
  Number of sequences in database:  6



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40