BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 6084de28f480e043303a90b000879b94.SwissProt.fasta
15 sequences; 4,548 total letters
Query= ACIAD3629
Length=302
Score E
Sequences producing significant alignments: (Bits) Value
P71318 Hydrogen peroxide-inducible genes activator [Pectobacteriu... 95.9 2e-26
Q9X725 Hydrogen peroxide-inducible genes activator [Dickeya chrys... 92.0 6e-25
P0ACQ6 Hydrogen peroxide-inducible genes activator [Escherichia c... 89.0 8e-24
P0ACQ5 Hydrogen peroxide-inducible genes activator [Escherichia c... 89.0 8e-24
P0ACQ4 Hydrogen peroxide-inducible genes activator [Escherichia c... 89.0 8e-24
P70785 HTH-type transcriptional regulator TtuA [Agrobacterium vitis] 86.7 6e-23
Q8X4M5 HTH-type transcriptional regulator CynR [Escherichia coli ... 85.1 2e-22
P27111 HTH-type transcriptional regulator CynR [Escherichia coli ... 84.7 3e-22
P44418 Hydrogen peroxide-inducible genes activator [Haemophilus i... 84.7 3e-22
P25544 RuBisCO operon transcriptional regulator [Allochromatium v... 84.0 5e-22
P49518 Probable RuBisCO transcriptional regulator [Trieres chinen... 84.0 5e-22
Q04778 HTH-type transcriptional regulator AlsR [Bacillus subtilis... 83.6 7e-22
P52693 Probable nitrogen assimilation transcriptional activator [... 82.0 3e-21
P52670 HTH-type transcriptional regulator IlvR [Caulobacter vibri... 75.9 3e-19
Q47005 Nitrogen assimilation regulatory protein nac [Escherichia ... 75.1 7e-19
>P71318 Hydrogen peroxide-inducible genes activator [Pectobacterium
carotovorum subsp. carotovorum]
Length=302
Score = 95.9 bits (237), Expect = 2e-26
Identities = 64/288 (22%), Positives = 127/288 (44%), Gaps = 0/288 (0%)
Query 7 DLRLFLHVVETGSFTQGAQHSALSLQAASERIRKLENGFGTQLFTRHRTGVELTCAGQRF 66
DL + + E F + A +S S +IRKLE+ G L R V T AG
Sbjct 5 DLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQAGLLL 64
Query 67 LEHARLLLQQSQSLEQDMNHFRQTPQHTIHLWCNSSAQSEYLPTLLPQYLAQCPSFNIEL 126
+E AR +L++ + L++ + +T +H+ + LP ++P P + L
Sbjct 65 VEQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVGPYLLPQIIPMLHRTFPKLEMYL 124
Query 127 HEAESSEIIQALEQGRAELGLISSFSQTEYLQTQEFVHDPLVLICPVNHGFTSSIPLSLS 186
HEA++ +++ L+ G+ + +++ ++E +P+ L +H + + +++S
Sbjct 125 HEAQTHQLLAQLDSGKLDCAILAMVKESEAFIEVPLFDEPMKLAIYQDHPWANRERVAMS 184
Query 187 DIFSDSMIGLSSHHSLQRSIDIQARALGVQIQYRIRLPNFNAIAEVVAAGSGVAIMPARA 246
D+ + ++ L H L+ G R + + +VAAGSG+ ++PA +
Sbjct 185 DLAGEKLLMLEDGHCLRDQAMGFCFQAGADEDTHFRATSLETLRNMVAAGSGITLLPALS 244
Query 247 AARLKASYDLAIIPLKGAWANRKLLVVARDFSQLSTPYQSFTEFLIQH 294
R + + +P R + +V R S L Y+ + + +H
Sbjct 245 VPRERERDGVCYLPCYKPEPKRTIALVYRPGSPLRGRYEQLADTIREH 292
>Q9X725 Hydrogen peroxide-inducible genes activator [Dickeya chrysanthemi]
Length=305
Score = 92.0 bits (227), Expect = 6e-25
Identities = 62/288 (22%), Positives = 126/288 (44%), Gaps = 0/288 (0%)
Query 7 DLRLFLHVVETGSFTQGAQHSALSLQAASERIRKLENGFGTQLFTRHRTGVELTCAGQRF 66
DL + + E F + A +S S +IRKLE+ G L R V T AG
Sbjct 5 DLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQAGLLL 64
Query 67 LEHARLLLQQSQSLEQDMNHFRQTPQHTIHLWCNSSAQSEYLPTLLPQYLAQCPSFNIEL 126
+E AR +L++ + L++ + + +H+ + LP ++P P + L
Sbjct 65 VEQARTVLREVKVLKEMASQQGEAMSGPLHIGLIPTVGPYLLPQIIPMLHRAFPKLEMYL 124
Query 127 HEAESSEIIQALEQGRAELGLISSFSQTEYLQTQEFVHDPLVLICPVNHGFTSSIPLSLS 186
HEA++ +++ L+ G+ + +++ ++E +P+ L +H + + +++S
Sbjct 125 HEAQTHQLLAQLDSGKLDCAILAMVKESEAFIEVPLFDEPMKLAIYQDHPWANRERVAMS 184
Query 187 DIFSDSMIGLSSHHSLQRSIDIQARALGVQIQYRIRLPNFNAIAEVVAAGSGVAIMPARA 246
D+ + ++ L H L+ G R + + +VAAGSG+ ++P+ A
Sbjct 185 DLSGEKLLMLEDGHCLRDQAMGFCFQAGADEDTHFRATSLETLRNMVAAGSGITLLPSLA 244
Query 247 AARLKASYDLAIIPLKGAWANRKLLVVARDFSQLSTPYQSFTEFLIQH 294
+ + + +P R + +V R S L Y+ + + +H
Sbjct 245 VPQERIRDGVCYLPCYKPEPKRTIALVYRPGSPLRGRYEQLADSVREH 292
>P0ACQ6 Hydrogen peroxide-inducible genes activator [Escherichia
coli O157:H7]
Length=305
Score = 89.0 bits (219), Expect = 8e-24
Identities = 62/283 (22%), Positives = 124/283 (44%), Gaps = 0/283 (0%)
Query 7 DLRLFLHVVETGSFTQGAQHSALSLQAASERIRKLENGFGTQLFTRHRTGVELTCAGQRF 66
DL + + E F + A +S S +IRKLE+ G L R V T AG
Sbjct 5 DLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQAGMLL 64
Query 67 LEHARLLLQQSQSLEQDMNHFRQTPQHTIHLWCNSSAQSEYLPTLLPQYLAQCPSFNIEL 126
++ AR +L++ + L++ + +T +H+ + LP ++P P + L
Sbjct 65 VDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVGPYLLPHIIPMLHQTFPKLEMYL 124
Query 127 HEAESSEIIQALEQGRAELGLISSFSQTEYLQTQEFVHDPLVLICPVNHGFTSSIPLSLS 186
HEA++ +++ L+ G+ + +++ ++E +P++L +H + + + ++
Sbjct 125 HEAQTHQLLAQLDSGKLDCVILALVKESEAFIEVPLFDEPMLLAIYEDHPWANRECVPMA 184
Query 187 DIFSDSMIGLSSHHSLQRSIDIQARALGVQIQYRIRLPNFNAIAEVVAAGSGVAIMPARA 246
D+ + ++ L H L+ G R + + +VAAGSG+ ++PA A
Sbjct 185 DLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNMVAAGSGITLLPALA 244
Query 247 AARLKASYDLAIIPLKGAWANRKLLVVARDFSQLSTPYQSFTE 289
+ + +P R + +V R S L + Y+ E
Sbjct 245 VPPERKRDGVVYLPCIKPEPRRTIGLVYRPGSPLRSRYEQLAE 287
>P0ACQ5 Hydrogen peroxide-inducible genes activator [Escherichia
coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)]
Length=305
Score = 89.0 bits (219), Expect = 8e-24
Identities = 62/283 (22%), Positives = 124/283 (44%), Gaps = 0/283 (0%)
Query 7 DLRLFLHVVETGSFTQGAQHSALSLQAASERIRKLENGFGTQLFTRHRTGVELTCAGQRF 66
DL + + E F + A +S S +IRKLE+ G L R V T AG
Sbjct 5 DLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQAGMLL 64
Query 67 LEHARLLLQQSQSLEQDMNHFRQTPQHTIHLWCNSSAQSEYLPTLLPQYLAQCPSFNIEL 126
++ AR +L++ + L++ + +T +H+ + LP ++P P + L
Sbjct 65 VDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVGPYLLPHIIPMLHQTFPKLEMYL 124
Query 127 HEAESSEIIQALEQGRAELGLISSFSQTEYLQTQEFVHDPLVLICPVNHGFTSSIPLSLS 186
HEA++ +++ L+ G+ + +++ ++E +P++L +H + + + ++
Sbjct 125 HEAQTHQLLAQLDSGKLDCVILALVKESEAFIEVPLFDEPMLLAIYEDHPWANRECVPMA 184
Query 187 DIFSDSMIGLSSHHSLQRSIDIQARALGVQIQYRIRLPNFNAIAEVVAAGSGVAIMPARA 246
D+ + ++ L H L+ G R + + +VAAGSG+ ++PA A
Sbjct 185 DLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNMVAAGSGITLLPALA 244
Query 247 AARLKASYDLAIIPLKGAWANRKLLVVARDFSQLSTPYQSFTE 289
+ + +P R + +V R S L + Y+ E
Sbjct 245 VPPERKRDGVVYLPCIKPEPRRTIGLVYRPGSPLRSRYEQLAE 287
>P0ACQ4 Hydrogen peroxide-inducible genes activator [Escherichia
coli (strain K12)]
Length=305
Score = 89.0 bits (219), Expect = 8e-24
Identities = 62/283 (22%), Positives = 124/283 (44%), Gaps = 0/283 (0%)
Query 7 DLRLFLHVVETGSFTQGAQHSALSLQAASERIRKLENGFGTQLFTRHRTGVELTCAGQRF 66
DL + + E F + A +S S +IRKLE+ G L R V T AG
Sbjct 5 DLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQAGMLL 64
Query 67 LEHARLLLQQSQSLEQDMNHFRQTPQHTIHLWCNSSAQSEYLPTLLPQYLAQCPSFNIEL 126
++ AR +L++ + L++ + +T +H+ + LP ++P P + L
Sbjct 65 VDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVGPYLLPHIIPMLHQTFPKLEMYL 124
Query 127 HEAESSEIIQALEQGRAELGLISSFSQTEYLQTQEFVHDPLVLICPVNHGFTSSIPLSLS 186
HEA++ +++ L+ G+ + +++ ++E +P++L +H + + + ++
Sbjct 125 HEAQTHQLLAQLDSGKLDCVILALVKESEAFIEVPLFDEPMLLAIYEDHPWANRECVPMA 184
Query 187 DIFSDSMIGLSSHHSLQRSIDIQARALGVQIQYRIRLPNFNAIAEVVAAGSGVAIMPARA 246
D+ + ++ L H L+ G R + + +VAAGSG+ ++PA A
Sbjct 185 DLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNMVAAGSGITLLPALA 244
Query 247 AARLKASYDLAIIPLKGAWANRKLLVVARDFSQLSTPYQSFTE 289
+ + +P R + +V R S L + Y+ E
Sbjct 245 VPPERKRDGVVYLPCIKPEPRRTIGLVYRPGSPLRSRYEQLAE 287
>P70785 HTH-type transcriptional regulator TtuA [Agrobacterium
vitis]
Length=304
Score = 86.7 bits (213), Expect = 6e-23
Identities = 77/294 (26%), Positives = 123/294 (42%), Gaps = 9/294 (3%)
Query 8 LRLFLHVVETGSFTQGAQHSALSLQAASERIRKLENGFGTQLFTRHRTGVELTCAGQRFL 67
LR F+ V + F + AQ L + S IR LE GT+L R V LT G L
Sbjct 6 LRCFVSVADELHFGRAAQKLGLMPASLSRHIRMLEESLGTRLMARTTRSVALTDDGLFLL 65
Query 68 EHARLLLQQSQSLEQDMNHFRQTPQHTIHLWCNSSAQSEYLPTLLPQYLAQCPSFNIELH 127
E AR +L++++ L+ RQ + + SA + LPTLL + QCP + +L
Sbjct 66 EGAREILERTEVLQNRFQTSRQERVEILRIGAIDSAAAGLLPTLLHDFRQQCPEISTQLS 125
Query 128 EAESSEIIQALEQGRAELGLISSFSQTE-YLQTQEFVHDPLVLICPVNHGFTSSIPLSLS 186
E ++ +I L G +L I + + L+T H+ V+ NH + +++
Sbjct 126 EDKTIRLIPKLLSGGLDLAFIRAPDFVDPKLKTVFLFHETAVVAMSENHRLAHNTSVTIH 185
Query 187 DIFSDSMI-----GLSSHHSLQRSIDIQARALGVQIQYRIRLPNFNAIAEVVAAGSGVAI 241
D+ + +I H L + I+A G+Q + I +VAA G+AI
Sbjct 186 DLADEPLIVPERRSRPHSHDLTMKLFIEA---GLQARVAQLAEEKQTIVNLVAAEIGLAI 242
Query 242 MPARAAARLKASYDLAIIPLKGAWANRKLLVVARDFSQLSTPYQSFTEFLIQHR 295
+P A + + A KL + A + P + L+Q R
Sbjct 243 VPQWTARLAVSGVRYVTLQTDAKEAMNKLPLSAAWLKGVRDPARDLIVSLLQSR 296
>Q8X4M5 HTH-type transcriptional regulator CynR [Escherichia coli
O157:H7]
Length=299
Score = 85.1 bits (209), Expect = 2e-22
Identities = 63/286 (22%), Positives = 130/286 (45%), Gaps = 3/286 (1%)
Query 8 LRLFLHVVETGSFTQGAQHSALSLQAASERIRKLENGFGTQLFTRHRTGVELTCAGQRFL 67
+ FL V E GSFT+ A +S A S++IR+LE G LF R + LT AG+ +
Sbjct 6 INYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLGVPLFDRSGRTIHLTDAGEVWR 65
Query 68 EHARLLLQQSQSLEQDMNHFRQTPQHTIHLWCNSSAQSEYLPTLLPQYLAQCPSFNIELH 127
++A LQ+ + ++ ++ + ++ + + S ++ L+ + A+ P ++L
Sbjct 66 QYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFTSYFIGPLMADFYARYPGITLQLQ 125
Query 128 EAESSEIIQALEQGRAELGLISSFSQTEYLQTQEFVHDPLVLICPVNHGFTSSIPLSLSD 187
E +I L + ++G+ + L+ + + L L+ +H + ++LS
Sbjct 126 EMSQEKIEDLLCRDELDVGIAFAPVHLPELEAIPLLTESLALVVAQHHPLAACEQVALSR 185
Query 188 IFSDSMIGLSSHHSLQRSIDIQARALGVQIQYRIRLPNFNAIAEVVAAGSGVAIMPARAA 247
+ + ++ LS+ + + ID G+ Q I + +A+ E++ S ++PA A
Sbjct 186 LHDEKLVLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELIRRTSLSTLLPAAIA 245
Query 248 ARLKASYDLAIIPLKGAWANRKLLVVARDFSQLSTPYQSFTEFLIQ 293
+ L IPL R +++ R S + ++F ++
Sbjct 246 TQHDG---LKAIPLAPPLLERTAVLLRRKNSWQTAAAKAFLHMALE 288
>P27111 HTH-type transcriptional regulator CynR [Escherichia coli
(strain K12)]
Length=299
Score = 84.7 bits (208), Expect = 3e-22
Identities = 65/294 (22%), Positives = 132/294 (45%), Gaps = 3/294 (1%)
Query 8 LRLFLHVVETGSFTQGAQHSALSLQAASERIRKLENGFGTQLFTRHRTGVELTCAGQRFL 67
+ FL V E GSFT+ A +S A S++IR+LE G LF R + LT AG+ +
Sbjct 6 INYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLGVPLFDRSGRTIRLTDAGEVWR 65
Query 68 EHARLLLQQSQSLEQDMNHFRQTPQHTIHLWCNSSAQSEYLPTLLPQYLAQCPSFNIELH 127
++A LQ+ + ++ ++ + ++ + + S ++ L+ + A+ PS ++L
Sbjct 66 QYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFTSYFIGPLMADFYARYPSITLQLQ 125
Query 128 EAESSEIIQALEQGRAELGLISSFSQTEYLQTQEFVHDPLVLICPVNHGFTSSIPLSLSD 187
E +I L + ++G+ + + L+ + + L L+ +H ++LS
Sbjct 126 EMSQEKIEDMLCRDELDVGIAFAPVHSPELEAIPLLTESLALVVAQHHPLAVHEQVALSR 185
Query 188 IFSDSMIGLSSHHSLQRSIDIQARALGVQIQYRIRLPNFNAIAEVVAAGSGVAIMPARAA 247
+ + ++ LS+ + + ID G+ Q I + +A+ E++ S ++PA A
Sbjct 186 LHDEKLVLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELIRRTSLSTLLPAAIA 245
Query 248 ARLKASYDLAIIPLKGAWANRKLLVVARDFSQLSTPYQSFTEFLIQHRPVTNGS 301
+ L I L R +++ R S + ++F + V G+
Sbjct 246 TQHDG---LKAISLAPPLLERTAVLLRRKNSWQTAAAKAFLHMALDKCAVVGGN 296
>P44418 Hydrogen peroxide-inducible genes activator [Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=301
Score = 84.7 bits (208), Expect = 3e-22
Identities = 60/279 (22%), Positives = 120/279 (43%), Gaps = 0/279 (0%)
Query 7 DLRLFLHVVETGSFTQGAQHSALSLQAASERIRKLENGFGTQLFTRHRTGVELTCAGQRF 66
DL + + E F + A +S S +IRKLE+ G L R V T +G
Sbjct 5 DLEYLVALSEYKHFRRAADSCNVSQPTLSGQIRKLEDELGIILLERTSRKVLFTQSGMLL 64
Query 67 LEHARLLLQQSQSLEQDMNHFRQTPQHTIHLWCNSSAQSEYLPTLLPQYLAQCPSFNIEL 126
++ AR +L++ + L++ ++ + +H+ + LP ++P A P + L
Sbjct 65 VDQARTVLREVKLLKEMASNQGKEMTGPLHIGLIPTVGPYLLPYIVPMLKAAFPDLEVFL 124
Query 127 HEAESSEIIQALEQGRAELGLISSFSQTEYLQTQEFVHDPLVLICPVNHGFTSSIPLSLS 186
+EA++ ++++ LE GR + ++++ +TE ++ ++L +H + L ++
Sbjct 125 YEAQTHQLLEQLETGRLDCAIVATVPETEAFIEVPIFNEKMLLAVSEHHPWAQESKLPMN 184
Query 187 DIFSDSMIGLSSHHSLQRSIDIQARALGVQIQYRIRLPNFNAIAEVVAAGSGVAIMPARA 246
+ M+ L H L+ G + + + + +VAA +G+ MP A
Sbjct 185 QLNGQEMLMLDDGHCLRNQALDYCFTAGAKENSHFQATSLETLRNMVAANAGITFMPELA 244
Query 247 AARLKASYDLAIIPLKGAWANRKLLVVARDFSQLSTPYQ 285
+ IP +R + +V R S L Y+
Sbjct 245 VLNEGTRKGVKYIPCYSPEPSRTIALVYRPGSPLRNRYE 283
>P25544 RuBisCO operon transcriptional regulator [Allochromatium
vinosum]
Length=302
Score = 84.0 bits (206), Expect = 5e-22
Identities = 60/292 (21%), Positives = 134/292 (46%), Gaps = 1/292 (0%)
Query 1 MRFDFVDLRLFLHVVETGSFTQGAQHSALSLQAASERIRKLENGFGTQLFTRHRTGVELT 60
M LR+F V S+T+ A+ LS A S ++R+LE+ G LF R V LT
Sbjct 1 MHVSLRQLRVFEAVARHNSYTRAAEELHLSQPAVSMQVRQLEDEIGLSLFERLGKQVVLT 60
Query 61 CAGQRFLEHARLLLQQSQSLEQDMNHFRQTPQHTIHLWCNSSAQSEYLPTLLPQYLAQCP 120
AG+ ++R + Q + +E+ + + + ++ + +S + + P L+ + +
Sbjct 61 EAGREVFHYSRAIGQSLREMEEVLESLKGVSRGSLRI-AVASTVNYFAPRLMAIFQQRHS 119
Query 121 SFNIELHEAESSEIIQALEQGRAELGLISSFSQTEYLQTQEFVHDPLVLICPVNHGFTSS 180
+ L ++Q L+ +L L+ + ++ + F+ +PLV+I P +H
Sbjct 120 GIGLRLDVTNRESLVQMLDSNSVDLVLMGVPPRNVEVEAEAFMDNPLVVIAPPDHPLAGE 179
Query 181 IPLSLSDIFSDSMIGLSSHHSLQRSIDIQARALGVQIQYRIRLPNFNAIAEVVAAGSGVA 240
+SL+ + ++ + +++++ G I++ +++ A+ + V +G G++
Sbjct 180 RAISLARLAEETFVMREEGSGTRQAMERFFSERGQTIRHGMQMTRNEAVKQAVRSGLGLS 239
Query 241 IMPARAAARLKASYDLAIIPLKGAWANRKLLVVARDFSQLSTPYQSFTEFLI 292
++ + L + ++G R+ +V R +LS +F EF++
Sbjct 240 VVSLHTIELELETRRLVTLDVEGFPDRRQWYLVYRRGKRLSPAAGAFREFVL 291
>P49518 Probable RuBisCO transcriptional regulator [Trieres chinensis]
Length=309
Score = 84.0 bits (206), Expect = 5e-22
Identities = 64/280 (23%), Positives = 132/280 (47%), Gaps = 8/280 (3%)
Query 3 FDFVDLRLFLHVVETGSFTQGAQHSALSLQAASERIRKLENGFGTQLFTRHRTGVELTCA 62
F LR+ + SFT+ A+ +S + S++I+ LE+ L R V LT A
Sbjct 5 FTLQQLRILKAIATEKSFTRAAEVLFVSQPSLSKQIKTLESRLNISLLNRENNIVSLTQA 64
Query 63 GQRFLEHARLLLQQSQSLEQDMNHFRQTPQHTIHLWCNSSAQSEYLPTLLPQYLAQCPSF 122
G+ FLE++ +L + + +N + + + + + + + +P +L + P
Sbjct 65 GKLFLEYSERILALCEESCRVLNDLKTGDRGNLIVGASQTIGTYLMPRVLALFAQNHPQI 124
Query 123 NIELHEAESSEIIQALEQGRAELGLISSFSQTEY---LQTQEFVHDPLVLICPVNHGFT- 178
NIE+H + +I + + +G ++ ++ E L+ ++FV+D L+LI P +H F
Sbjct 125 NIEVHVDSTRKIAKRVLEGDIDIAVVGGNIPEEIEKNLKVEDFVNDELILIIPKSHPFAL 184
Query 179 -SSIPLSLSDIFSDSMIGLSSHHSLQRSID---IQARALGVQIQYRIRLPNFNAIAEVVA 234
++ D++ + I L+S+ ++++ ID IQ Q ++L + AI V+
Sbjct 185 KKKKKINKDDLYHLNFITLNSNSTIRKLIDNILIQIAFEPKQFNIIMQLNSIEAIKTAVS 244
Query 235 AGSGVAIMPARAAARLKASYDLAIIPLKGAWANRKLLVVA 274
G G A + + A + + I+ ++ R L +++
Sbjct 245 LGLGAAFVSSSAIEKEIELKTIEIVTIEDIKITRILSIIS 284
>Q04778 HTH-type transcriptional regulator AlsR [Bacillus subtilis
(strain 168)]
Length=302
Score = 83.6 bits (205), Expect = 7e-22
Identities = 65/242 (27%), Positives = 110/242 (45%), Gaps = 4/242 (2%)
Query 8 LRLFLHVVETGSFTQGAQHSALSLQAASERIRKLENGFGTQLFTRHRTGVELTCAGQRFL 67
L+ F+ V E F + A+ ++ S++I++LE G L R + VELT AG+ FL
Sbjct 6 LQYFIAVAEELHFGKAARRLNMTQPPLSQQIKQLEEEVGVTLLKRTKRFVELTAAGEIFL 65
Query 68 EHARLLLQQ-SQSLEQDMNHFRQTPQHTIHLWCNSSAQSEYLPTLLPQYLAQCPSFNIEL 126
H R+ L Q Q +E R Q + + SA E+LP ++ +Y + PS IEL
Sbjct 66 NHCRMALMQIGQGIELAQRTARGE-QGLLVIGFVGSATYEFLPPIVREYRKKFPSVKIEL 124
Query 127 HEAESSEIIQALEQGRAELGLISSFSQTEYLQTQEFVHDPLVLICPVNHGFTSSIPLSLS 186
E SS + L +G ++G++ Q L + P VL P H TS +++
Sbjct 125 REISSSRQQEELLKGNIDIGILHPPLQHTALHIETAQSSPCVLALPKQHPLTSKESITIE 184
Query 187 DIFSDSMIGLSSH--HSLQRSIDIQARALGVQIQYRIRLPNFNAIAEVVAAGSGVAIMPA 244
D+ + +I ++ +L G + + + +V+AG G+ +P+
Sbjct 185 DLRDEPIITVAKEAWPTLYMDFIQFCEQAGFRPNIVQEATEYQMVIGLVSAGIGMTFVPS 244
Query 245 RA 246
A
Sbjct 245 SA 246
>P52693 Probable nitrogen assimilation transcriptional activator
[Synechococcus elongatus (strain ATCC 33912 / PCC 7942 /
FACHB-805)]
Length=309
Score = 82.0 bits (201), Expect = 3e-21
Identities = 63/279 (23%), Positives = 125/279 (45%), Gaps = 5/279 (2%)
Query 8 LRLFLHVVETGSFTQGAQHSALSLQAASERIRKLENGFGTQLFTRHRTGVELTCAGQRFL 67
L+ L V ETGSF + AQ + S +++ LE+ G LF R + ++LT AG+R L
Sbjct 6 LQAALRVAETGSFQEAAQKVGCNQSTISRQVKGLEDELGIALF-RRQGRMKLTAAGERLL 64
Query 68 EHARLLLQQSQSLEQDMNHFRQTPQHTIHLWCNSSAQSEYLPTLLPQYLAQCPSFNIELH 127
R + Q+ Q+ ++ Q + + S YLP +L ++ Q PS ++ +
Sbjct 65 PRLRRICQEWQTACTEIEELLTGRQTELCMAIADSIGGCYLPAVLNRFQQQWPSIHLRVS 124
Query 128 EAESSEIIQALEQGRAELGLIS---SFSQTEYLQTQEFVHDPLVLICPVNHGFTSSIPLS 184
S ++ L G +L ++ + + + L + + + ++ V+H ++
Sbjct 125 TLGSDRALKVLRDGLIDLAIVMDSPTLTTSAGLVVDLLLEEEVQVLLSVDHPLADQKAIA 184
Query 185 LSDIFSDSMIGLSSHHSLQRSIDIQARALGVQIQYRIRLPNFNAIAEVVAAGSGVAIMPA 244
+ + + +QR ++ + R LG+++ + L + ++ VV G +A++P
Sbjct 185 WEQLSHVPQVVFKDGYGMQRLVEQRFRELGLELNSCLELNSLDSFRGVVREGYWLALLPQ 244
Query 245 RAAARLKASYDLAIIPLKGAWANRKLLVVARDFSQLSTP 283
A + L I P R++ +V + QLS P
Sbjct 245 AALVDARHDPRLVIRPTAEPRLTRRIKLVIPE-EQLSLP 282
>P52670 HTH-type transcriptional regulator IlvR [Caulobacter vibrioides
(strain ATCC 19089 / CB15)]
Length=296
Score = 75.9 bits (185), Expect = 3e-19
Identities = 73/269 (27%), Positives = 120/269 (45%), Gaps = 17/269 (6%)
Query 6 VDLRLFLH---VVETGSFTQGAQHSALSLQAASERIRKLENGFGTQLFTRHRTGVELTCA 62
+D+R F H V ET F + A+ ++ S+ I+ LE G LF R + VELT
Sbjct 1 MDIRQFRHFAAVAETLHFGRAAERLGITQPPLSQSIQALEKALGAPLFARTKRHVELTAL 60
Query 63 GQRFLEHARLLLQQSQSLEQDMNHFRQTPQHTIHLWCNSSAQSEYLPTLLPQYLAQCPSF 122
G+++L H L +L R + L S+A LP L+ +Y P
Sbjct 61 GRQWLPHVLEALAAVDALPDTARRLRDGQTGYLSLSFVSTADYSVLPDLVRRYAEAFPGV 120
Query 123 NIELHEAESSEIIQALEQGRAELGLI---SSFSQTEYLQTQEFVHDPLVLICPVNHGFTS 179
I+L EA S + A++ G G+I + S L + V +PLV + P G
Sbjct 121 EIQLVEATSDVQVPAIQAGERHAGIIIPPPNRSLPAALAYRRLVSEPLVAVTPEAWGAEG 180
Query 180 SIPL-SLSD---IFSDSMIGLSSHHSLQRSIDIQARALGVQIQYRIRLPNFNAIAEVVAA 235
+ L +L+D + + + H + + + + + + +Q I++ I +V+A
Sbjct 181 PLDLAALADVPLVLFPRTVAPAFHDLVTGYVAARGQPVRI-VQEAIQM---QTIISLVSA 236
Query 236 GSGVAIMPA--RAAARLKASY-DLAIIPL 261
G G+A+ PA R AR+ Y DL P+
Sbjct 237 GLGMALAPASLRKLARVGVRYVDLVDPPI 265
>Q47005 Nitrogen assimilation regulatory protein nac [Escherichia
coli (strain K12)]
Length=305
Score = 75.1 bits (183), Expect = 7e-19
Identities = 63/255 (25%), Positives = 117/255 (46%), Gaps = 18/255 (7%)
Query 4 DFVDLRLFLHVVETGSFTQGAQHSALSLQAASERIRKLENGFGTQLFTRHRTGVELTCAG 63
+F L+ F+ +V+ GS TQ A+ ++ A S+++ LE QL R + GV T AG
Sbjct 2 NFRRLKYFVKIVDIGSLTQAAEVLHIAQPALSQQVATLEGELNQQLLIRTKRGVTPTDAG 61
Query 64 QRFLEHARLLLQQSQSLEQDMNHFRQTPQHTIHL-WCNSSAQSEYLPTLLPQYLAQCPSF 122
+ HAR +L+Q + + +++ Q + + + +A S LL A+ P
Sbjct 62 KILYTHARAILRQCEQAQLAVHNVGQALSGQVSIGFAPGTAASSITMPLLQAVRAEFPEI 121
Query 123 NIELHEAESSEIIQALEQGRAELGLISSFSQTEYLQTQEFVHDPLVLI----CP---VNH 175
I LHE + + + L + ++ +I S + +Q + + L L+ CP V+
Sbjct 122 VIYLHENSGAVLNEKLINHQLDMAVIYEHSPVAGVSSQALLKEDLFLVGTQDCPGQSVDV 181
Query 176 GFTSSIPLSLSDIFSDSMIGLSSHHSLQRSIDIQARALGVQIQYRIRLPNFNAIAEVVAA 235
+ + L L +S + + SL+R + A+ +G + + + +A+
Sbjct 182 NAIAQMNLFLPSDYSAIRLRVDEAFSLRR---LTAKVIG-------EIESIATLTAAIAS 231
Query 236 GSGVAIMPARAAARL 250
G GVA++P AA L
Sbjct 232 GMGVAVLPESAARSL 246
Lambda K H a alpha
0.324 0.135 0.392 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 995361
Database: 6084de28f480e043303a90b000879b94.SwissProt.fasta
Posted date: May 20, 2024 11:20 PM
Number of letters in database: 4,548
Number of sequences in database: 15
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
