BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: e18787b2056558dde1175a3f3f915494.SwissProt.fasta
21 sequences; 3,281 total letters
Query= ACIAD0114
Length=157
Score E
Sequences producing significant alignments: (Bits) Value
P0ACJ2 Leucine-responsive regulatory protein [Escherichia coli O1... 165 2e-56
P0A2S0 Leucine-responsive regulatory protein [Salmonella typhimur... 165 2e-56
P37424 Leucine-responsive regulatory protein [Klebsiella pneumoniae] 165 2e-56
P0ACJ4 Leucine-responsive regulatory protein [Klebsiella aerogenes] 165 2e-56
P0ACJ0 Leucine-responsive regulatory protein [Escherichia coli (s... 165 2e-56
P45265 Leucine-responsive regulatory protein [Haemophilus influen... 149 3e-50
Q44333 Proline dehydrogenase transcriptional activator [Rhizobium... 122 6e-40
Q52710 Proline dehydrogenase transcriptional activator [Rhodobact... 114 8e-37
E1V7V9 Transcriptional regulatory protein DoeX [Halomonas elongat... 104 8e-33
P0ACJ6 DNA-binding transcriptional activator DecR [Escherichia co... 101 1e-31
P0ACJ7 DNA-binding transcriptional activator DecR [Escherichia co... 101 1e-31
P0ACJ5 DNA-binding transcriptional activator DecR [Escherichia co... 101 1e-31
Q9I1M3 Bkd operon transcriptional regulator [Pseudomonas aerugino... 96.3 1e-29
P42179 Bkd operon transcriptional regulator [Pseudomonas putida] 94.4 9e-29
Q8U0P3 HTH-type transcriptional regulator FL11 [Pyrococcus furios... 92.0 6e-28
Q9V0Y9 HTH-type transcriptional regulator FL11 [Pyrococcus abyssi... 88.6 1e-26
O59188 HTH-type transcriptional regulator FL11 [Pyrococcus horiko... 85.5 2e-25
F8DT92 Glutamate uptake regulatory protein [Zymomonas mobilis sub... 85.1 4e-25
P56901 Leucine-responsive regulatory protein [Rhizobium meliloti ... 78.6 1e-22
O07920 Transcriptional regulator AzlB [Bacillus subtilis (strain ... 72.4 3e-20
P50337 Uncharacterized HTH-type transcriptional regulator y4sM [S... 67.8 8e-19
>P0ACJ2 Leucine-responsive regulatory protein [Escherichia coli
O157:H7]
Length=164
Score = 165 bits (417), Expect = 2e-56
Identities = 81/145 (56%), Positives = 110/145 (76%), Gaps = 0/145 (0%)
Query 4 LDRIDRQILDILQKEGRIAISELASRVNLSTTPCSERVKRLERDGIITGYHARLNPIYVD 63
LDRIDR IL+ LQK+GRI+ EL+ RV LS TPC ERV+RLER G I GY A LNP Y+D
Sbjct 12 LDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQGYTALLNPHYLD 71
Query 64 RNLLVFLEIKLSAKSGDVFDQVARDLVEIPEVLECHLISGEFDYLVKARLKEMSAYRRLL 123
+LLVF+EI L+ + DVF+Q + ++ E+ ECHL+SG+FDYL+K R+ +MSAYR+LL
Sbjct 72 ASLLVFVEITLNRGAPDVFEQFNTAVQKLEEIQECHLVSGDFDYLLKTRVPDMSAYRKLL 131
Query 124 GDLLKKLPSSASSHSYIVMEEIKET 148
G+ L +LP + +Y+VMEE+K++
Sbjct 132 GETLLRLPGVNDTRTYVVMEEVKQS 156
>P0A2S0 Leucine-responsive regulatory protein [Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720)]
Length=164
Score = 165 bits (417), Expect = 2e-56
Identities = 81/145 (56%), Positives = 110/145 (76%), Gaps = 0/145 (0%)
Query 4 LDRIDRQILDILQKEGRIAISELASRVNLSTTPCSERVKRLERDGIITGYHARLNPIYVD 63
LDRIDR IL+ LQK+GRI+ EL+ RV LS TPC ERV+RLER G I GY A LNP Y+D
Sbjct 12 LDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQGYTALLNPHYLD 71
Query 64 RNLLVFLEIKLSAKSGDVFDQVARDLVEIPEVLECHLISGEFDYLVKARLKEMSAYRRLL 123
+LLVF+EI L+ + DVF+Q + ++ E+ ECHL+SG+FDYL+K R+ +MSAYR+LL
Sbjct 72 ASLLVFVEITLNRGAPDVFEQFNAAVQKLEEIQECHLVSGDFDYLLKTRVPDMSAYRKLL 131
Query 124 GDLLKKLPSSASSHSYIVMEEIKET 148
G+ L +LP + +Y+VMEE+K++
Sbjct 132 GETLLRLPGVNDTRTYVVMEEVKQS 156
>P37424 Leucine-responsive regulatory protein [Klebsiella pneumoniae]
Length=164
Score = 165 bits (417), Expect = 2e-56
Identities = 81/145 (56%), Positives = 110/145 (76%), Gaps = 0/145 (0%)
Query 4 LDRIDRQILDILQKEGRIAISELASRVNLSTTPCSERVKRLERDGIITGYHARLNPIYVD 63
LDRIDR IL+ LQK+GRI+ EL+ RV LS TPC ERV+RLER G I GY A LNP Y+D
Sbjct 12 LDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQGYTALLNPHYLD 71
Query 64 RNLLVFLEIKLSAKSGDVFDQVARDLVEIPEVLECHLISGEFDYLVKARLKEMSAYRRLL 123
+LLVF+EI L+ + DVF+Q + ++ E+ ECHL+SG+FDYL+K R+ +MSAYR+LL
Sbjct 72 ASLLVFVEITLNRGAPDVFEQFNSAVQKLEEIQECHLVSGDFDYLLKTRVPDMSAYRKLL 131
Query 124 GDLLKKLPSSASSHSYIVMEEIKET 148
G+ L +LP + +Y+VMEE+K++
Sbjct 132 GETLLRLPGVNDTRTYVVMEEVKQS 156
>P0ACJ4 Leucine-responsive regulatory protein [Klebsiella aerogenes]
Length=164
Score = 165 bits (417), Expect = 2e-56
Identities = 81/145 (56%), Positives = 110/145 (76%), Gaps = 0/145 (0%)
Query 4 LDRIDRQILDILQKEGRIAISELASRVNLSTTPCSERVKRLERDGIITGYHARLNPIYVD 63
LDRIDR IL+ LQK+GRI+ EL+ RV LS TPC ERV+RLER G I GY A LNP Y+D
Sbjct 12 LDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQGYTALLNPHYLD 71
Query 64 RNLLVFLEIKLSAKSGDVFDQVARDLVEIPEVLECHLISGEFDYLVKARLKEMSAYRRLL 123
+LLVF+EI L+ + DVF+Q + ++ E+ ECHL+SG+FDYL+K R+ +MSAYR+LL
Sbjct 72 ASLLVFVEITLNRGAPDVFEQFNTAVQKLEEIQECHLVSGDFDYLLKTRVPDMSAYRKLL 131
Query 124 GDLLKKLPSSASSHSYIVMEEIKET 148
G+ L +LP + +Y+VMEE+K++
Sbjct 132 GETLLRLPGVNDTRTYVVMEEVKQS 156
>P0ACJ0 Leucine-responsive regulatory protein [Escherichia coli
(strain K12)]
Length=164
Score = 165 bits (417), Expect = 2e-56
Identities = 81/145 (56%), Positives = 110/145 (76%), Gaps = 0/145 (0%)
Query 4 LDRIDRQILDILQKEGRIAISELASRVNLSTTPCSERVKRLERDGIITGYHARLNPIYVD 63
LDRIDR IL+ LQK+GRI+ EL+ RV LS TPC ERV+RLER G I GY A LNP Y+D
Sbjct 12 LDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQGYTALLNPHYLD 71
Query 64 RNLLVFLEIKLSAKSGDVFDQVARDLVEIPEVLECHLISGEFDYLVKARLKEMSAYRRLL 123
+LLVF+EI L+ + DVF+Q + ++ E+ ECHL+SG+FDYL+K R+ +MSAYR+LL
Sbjct 72 ASLLVFVEITLNRGAPDVFEQFNTAVQKLEEIQECHLVSGDFDYLLKTRVPDMSAYRKLL 131
Query 124 GDLLKKLPSSASSHSYIVMEEIKET 148
G+ L +LP + +Y+VMEE+K++
Sbjct 132 GETLLRLPGVNDTRTYVVMEEVKQS 156
>P45265 Leucine-responsive regulatory protein [Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=166
Score = 149 bits (376), Expect = 3e-50
Identities = 74/150 (49%), Positives = 105/150 (70%), Gaps = 0/150 (0%)
Query 2 RALDRIDRQILDILQKEGRIAISELASRVNLSTTPCSERVKRLERDGIITGYHARLNPIY 61
+ALD ID +IL+ LQ+ G+I+ +L+ +V LS TPC ERVKRLE+ G+I GY A LNP
Sbjct 14 KALDAIDIKILNELQRNGKISNIDLSKKVGLSPTPCLERVKRLEKQGVIMGYRALLNPEL 73
Query 62 VDRNLLVFLEIKLSAKSGDVFDQVARDLVEIPEVLECHLISGEFDYLVKARLKEMSAYRR 121
+D LLV +EI L DVF++ + + E+ ECHL+SG+FDYL+K R+ +M+ YR+
Sbjct 74 LDAPLLVIVEITLVRGKPDVFEEFNAAIQALEEIQECHLVSGDFDYLLKTRVADMAEYRK 133
Query 122 LLGDLLKKLPSSASSHSYIVMEEIKETLFL 151
LLG L +LP + +Y+VMEE+K+T FL
Sbjct 134 LLGTTLLRLPGVNDTRTYVVMEEVKQTNFL 163
>Q44333 Proline dehydrogenase transcriptional activator [Rhizobium
radiobacter]
Length=156
Score = 122 bits (307), Expect = 6e-40
Identities = 59/145 (41%), Positives = 95/145 (66%), Gaps = 0/145 (0%)
Query 4 LDRIDRQILDILQKEGRIAISELASRVNLSTTPCSERVKRLERDGIITGYHARLNPIYVD 63
LD D +IL+ L ++GR+++ +L+ RV LS TPC R+KRL +G I G+ A LNP +
Sbjct 10 LDHFDLKILEALSEDGRMSVLQLSKRVGLSKTPCQTRLKRLVDEGYILGFRAVLNPQKLG 69
Query 64 RNLLVFLEIKLSAKSGDVFDQVARDLVEIPEVLECHLISGEFDYLVKARLKEMSAYRRLL 123
+ + F E+KLS ++ + +I EV ECH+I+G FDYL+K R ++ YRR+L
Sbjct 70 VDHIAFAEVKLSDTREKALEEFNTAVRKIKEVEECHMIAGAFDYLLKVRTSDIRKYRRVL 129
Query 124 GDLLKKLPSSASSHSYIVMEEIKET 148
G+ + LPS +++ +++VM+ +KET
Sbjct 130 GEKISSLPSVSNTSTFVVMQSVKET 154
>Q52710 Proline dehydrogenase transcriptional activator [Rhodobacter
capsulatus]
Length=154
Score = 114 bits (286), Expect = 8e-37
Identities = 57/144 (40%), Positives = 92/144 (64%), Gaps = 0/144 (0%)
Query 4 LDRIDRQILDILQKEGRIAISELASRVNLSTTPCSERVKRLERDGIITGYHARLNPIYVD 63
+D DR+IL L RI ++ELA +V LS TP + R++ +E G+ITGY A L+PI +
Sbjct 5 IDATDRRILHELCANARIPVTELARKVGLSKTPVAARIRAMEEMGLITGYRAMLSPIRLG 64
Query 64 RNLLVFLEIKLSAKSGDVFDQVARDLVEIPEVLECHLISGEFDYLVKARLKEMSAYRRLL 123
+ ++E++L+ +Q + EIPEV EC++I+G FDYL+K R +++ YR+++
Sbjct 65 LIHVTYVEVRLNDTRQKALEQFNAAVREIPEVEECYMIAGGFDYLLKVRSHDIAEYRKIM 124
Query 124 GDLLKKLPSSASSHSYIVMEEIKE 147
G+ L LP A++ SY+ ME + E
Sbjct 125 GEKLSALPHVAATSSYVAMEAVVE 148
>E1V7V9 Transcriptional regulatory protein DoeX [Halomonas elongata
(strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198
/ 1H9)]
Length=158
Score = 104 bits (260), Expect = 8e-33
Identities = 57/143 (40%), Positives = 86/143 (60%), Gaps = 0/143 (0%)
Query 4 LDRIDRQILDILQKEGRIAISELASRVNLSTTPCSERVKRLERDGIITGYHARLNPIYVD 63
LDR D +IL+IL ++GRI S+LA +NLS +PC ERV+RLE+ G+I GY ARLN +
Sbjct 3 LDRYDLKILEILSRDGRITKSKLAEAINLSVSPCWERVRRLEKAGVIEGYGARLNTDVLV 62
Query 64 RNLLVFLEIKLSAKSGDVFDQVARDLVEIPEVLECHLISGEFDYLVKARLKEMSAYRRLL 123
+ V+++I+L A + + F + + + PEV EC + G DYLVK + Y+RL+
Sbjct 63 KRTPVWVQIELKAHNAESFARFEALVHDTPEVTECVAVGGGVDYLVKFEATTIDTYQRLI 122
Query 124 GDLLKKLPSSASSHSYIVMEEIK 146
+ L +YIV + +K
Sbjct 123 DEWLVSDVGIERYFTYIVTKTVK 145
>P0ACJ6 DNA-binding transcriptional activator DecR [Escherichia
coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)]
Length=152
Score = 101 bits (252), Expect = 1e-31
Identities = 55/150 (37%), Positives = 89/150 (59%), Gaps = 0/150 (0%)
Query 4 LDRIDRQILDILQKEGRIAISELASRVNLSTTPCSERVKRLERDGIITGYHARLNPIYVD 63
LD+IDR++L +LQ++ +++ LA VNL+TTPC +R+KRLE DGI+ G A L+P +
Sbjct 2 LDKIDRKLLALLQQDCTLSLQALAEAVNLTTTPCWKRLKRLEDDGILIGKVALLDPEKIG 61
Query 64 RNLLVFLEIKLSAKSGDVFDQVARDLVEIPEVLECHLISGEFDYLVKARLKEMSAYRRLL 123
L F+ IK S + + + + E+PEVL ++GE+DYL++ ++ +M Y
Sbjct 62 LGLTAFVLIKTQHHSSEWYCRFVTVVTEMPEVLGFWRMAGEYDYLMRVQVADMKRYDEFY 121
Query 124 GDLLKKLPSSASSHSYIVMEEIKETLFLDV 153
L+ +P + S ME+IK T L +
Sbjct 122 KRLVNSVPGLSDVTSSFAMEQIKYTTSLPI 151
>P0ACJ7 DNA-binding transcriptional activator DecR [Escherichia
coli O157:H7]
Length=152
Score = 101 bits (252), Expect = 1e-31
Identities = 55/150 (37%), Positives = 89/150 (59%), Gaps = 0/150 (0%)
Query 4 LDRIDRQILDILQKEGRIAISELASRVNLSTTPCSERVKRLERDGIITGYHARLNPIYVD 63
LD+IDR++L +LQ++ +++ LA VNL+TTPC +R+KRLE DGI+ G A L+P +
Sbjct 2 LDKIDRKLLALLQQDCTLSLQALAEAVNLTTTPCWKRLKRLEDDGILIGKVALLDPEKIG 61
Query 64 RNLLVFLEIKLSAKSGDVFDQVARDLVEIPEVLECHLISGEFDYLVKARLKEMSAYRRLL 123
L F+ IK S + + + + E+PEVL ++GE+DYL++ ++ +M Y
Sbjct 62 LGLTAFVLIKTQHHSSEWYCRFVTVVTEMPEVLGFWRMAGEYDYLMRVQVADMKRYDEFY 121
Query 124 GDLLKKLPSSASSHSYIVMEEIKETLFLDV 153
L+ +P + S ME+IK T L +
Sbjct 122 KRLVNSVPGLSDVTSSFAMEQIKYTTSLPI 151
>P0ACJ5 DNA-binding transcriptional activator DecR [Escherichia
coli (strain K12)]
Length=152
Score = 101 bits (252), Expect = 1e-31
Identities = 55/150 (37%), Positives = 89/150 (59%), Gaps = 0/150 (0%)
Query 4 LDRIDRQILDILQKEGRIAISELASRVNLSTTPCSERVKRLERDGIITGYHARLNPIYVD 63
LD+IDR++L +LQ++ +++ LA VNL+TTPC +R+KRLE DGI+ G A L+P +
Sbjct 2 LDKIDRKLLALLQQDCTLSLQALAEAVNLTTTPCWKRLKRLEDDGILIGKVALLDPEKIG 61
Query 64 RNLLVFLEIKLSAKSGDVFDQVARDLVEIPEVLECHLISGEFDYLVKARLKEMSAYRRLL 123
L F+ IK S + + + + E+PEVL ++GE+DYL++ ++ +M Y
Sbjct 62 LGLTAFVLIKTQHHSSEWYCRFVTVVTEMPEVLGFWRMAGEYDYLMRVQVADMKRYDEFY 121
Query 124 GDLLKKLPSSASSHSYIVMEEIKETLFLDV 153
L+ +P + S ME+IK T L +
Sbjct 122 KRLVNSVPGLSDVTSSFAMEQIKYTTSLPI 151
>Q9I1M3 Bkd operon transcriptional regulator [Pseudomonas aeruginosa
(strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847
/ LMG 12228 / 1C / PRS 101 / PAO1)]
Length=153
Score = 96.3 bits (238), Expect = 1e-29
Identities = 49/145 (34%), Positives = 85/145 (59%), Gaps = 0/145 (0%)
Query 1 MRALDRIDRQILDILQKEGRIAISELASRVNLSTTPCSERVKRLERDGIITGYHARLNPI 60
M LDRID +IL L +GR++ +LA +V LS TP RV+RLE + I GY ARL+
Sbjct 1 MAELDRIDLKILRALADDGRLSWRDLAQKVGLSLTPTLRRVRRLEEEHYIQGYFARLDEE 60
Query 61 YVDRNLLVFLEIKLSAKSGDVFDQVARDLVEIPEVLECHLISGEFDYLVKARLKEMSAYR 120
+ + VF+ + L ++GD + +V+ P+V+ C ++G+ DY+++ +K+++AY+
Sbjct 61 RLSGAMSVFVSVSLEKQTGDYLARFEERIVDAPQVMSCFQMTGDADYMLRVVVKDLAAYQ 120
Query 121 RLLGDLLKKLPSSASSHSYIVMEEI 145
L + L +P A S ++ +
Sbjct 121 AFLTNTLTCIPGVAGIKSAFALKSV 145
>P42179 Bkd operon transcriptional regulator [Pseudomonas putida]
Length=161
Score = 94.4 bits (233), Expect = 9e-29
Identities = 53/146 (36%), Positives = 84/146 (58%), Gaps = 1/146 (1%)
Query 1 MRALDRIDRQILDILQKEGRIAISELASRVNLSTTPCSERVKRLERDGIITGYHARLNPI 60
MR LDR D IL+ LQ+ RI +ELA VNLS TPC RV+ +E G+I L+P
Sbjct 1 MRKLDRTDIGILNSLQENARITNAELARSVNLSPTPCFNRVRAMEELGVIRQQVTLLSPE 60
Query 61 YVDRNLLVFLEIKLSAKSGDVFDQVARDLVEIPEVLECHLISGEFDYLVKARLKEMSAYR 120
+ ++ VF+ + L + + ++ E PEV+EC+L++G+ DYL++ L + A
Sbjct 61 ALGLDVNVFIHVSLEKQVEQSLHRFEEEIAERPEVMECYLMTGDPDYLLRVLLPSIQALE 120
Query 121 RLLGDLLKKLPSSASSHSYIVMEEIK 146
R L D L +LP A+ S +++++
Sbjct 121 RFL-DYLTRLPGVANIRSSFALKQVR 145
>Q8U0P3 HTH-type transcriptional regulator FL11 [Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)]
Length=151
Score = 92.0 bits (227), Expect = 6e-28
Identities = 51/150 (34%), Positives = 88/150 (59%), Gaps = 4/150 (3%)
Query 4 LDRIDRQILDILQKEGRIAISELASRVNLSTTPCSERVKRLERDGIITGYHARLNPIYVD 63
LD ID++I++ILQK+G++ + E++ L+ + ER+KRL G+I + A +NP +
Sbjct 5 LDDIDKKIIEILQKDGKVPLREISKITGLAESTIHERIKRLRESGVIKKFTAVVNPEALG 64
Query 64 RNLLVFLEIKLSAKSGDVFDQVARDLVEIPEVLECHLISGEFDYLVKARLKEMSAYRRLL 123
N+L F+ IK+ A + +VA LV+ PE++E + +G++D +VK R K L
Sbjct 65 YNILAFILIKVKAGK---YSEVASKLVKYPEIVEVYETTGDYDMVVKIRTKNSEELNNFL 121
Query 124 GDLLKKLPSSASSHSYIVMEEIKETLFLDV 153
D++ + +H+ IV++ KET L V
Sbjct 122 -DMVGSIEGVEGTHTMIVLKVHKETTELPV 150
>Q9V0Y9 HTH-type transcriptional regulator FL11 [Pyrococcus abyssi
(strain GE5 / Orsay)]
Length=151
Score = 88.6 bits (218), Expect = 1e-26
Identities = 49/151 (32%), Positives = 88/151 (58%), Gaps = 4/151 (3%)
Query 3 ALDRIDRQILDILQKEGRIAISELASRVNLSTTPCSERVKRLERDGIITGYHARLNPIYV 62
+LD IDR+I+ ILQK+G+ + E++ L+ + ER+K+L G+I + A +NP +
Sbjct 4 SLDEIDRRIIKILQKDGKAPLREISKITGLAESTIHERIKKLRESGVIRKFTAIVNPEAL 63
Query 63 DRNLLVFLEIKLSAKSGDVFDQVARDLVEIPEVLECHLISGEFDYLVKARLKEMSAYRRL 122
++L F+ IK+ A + +VA +LV+ E++E + +G++D +VK R K
Sbjct 64 GYSMLAFILIKVKAGK---YAEVASNLVKYEEIMEVYETTGDYDMVVKIRTKNSEELNSF 120
Query 123 LGDLLKKLPSSASSHSYIVMEEIKETLFLDV 153
L D++ +P +H+ IV++ KET L +
Sbjct 121 L-DVIGSIPGVEGTHTMIVLKTHKETTELPI 150
>O59188 HTH-type transcriptional regulator FL11 [Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3)]
Length=151
Score = 85.5 bits (210), Expect = 2e-25
Identities = 45/150 (30%), Positives = 86/150 (57%), Gaps = 4/150 (3%)
Query 4 LDRIDRQILDILQKEGRIAISELASRVNLSTTPCSERVKRLERDGIITGYHARLNPIYVD 63
LD ID++I+ ILQ +G+ + E++ L+ + ER+++L G+I + A ++P +
Sbjct 5 LDEIDKKIIKILQNDGKAPLREISKITGLAESTIHERIRKLRESGVIKKFTAIIDPEALG 64
Query 64 RNLLVFLEIKLSAKSGDVFDQVARDLVEIPEVLECHLISGEFDYLVKARLKEMSAYRRLL 123
++L F+ +K+ A + +VA +L + PE++E + +G++D +VK R K L
Sbjct 65 YSMLAFILVKVKAGK---YSEVASNLAKYPEIVEVYETTGDYDMVVKIRTKNSEELNNFL 121
Query 124 GDLLKKLPSSASSHSYIVMEEIKETLFLDV 153
DL+ +P +H+ IV++ KET L +
Sbjct 122 -DLIGSIPGVEGTHTMIVLKTHKETTELPI 150
>F8DT92 Glutamate uptake regulatory protein [Zymomonas mobilis
subsp. mobilis (strain ATCC 10988 / DSM 424 / LMG 404 / NCIMB
8938 / NRRL B-806 / ZM1)]
Length=164
Score = 85.1 bits (209), Expect = 4e-25
Identities = 49/151 (32%), Positives = 84/151 (56%), Gaps = 1/151 (1%)
Query 1 MRALDRIDRQILDILQKEGRIAISELASRVNLSTTPCSERVKRLERDGIITGYHARLNPI 60
+R LD D +ILD+LQ + ++EL+ + LS C R++ LE DG+I L+P
Sbjct 2 IRKLDDFDIKILDLLQHDATATMAELSEKTGLSANACWRRIRLLEADGVIKNRVTLLDPQ 61
Query 61 YVDRNLLVFLEIKLSAKSGDVFDQVARDLVEIPEVLECHLISGEFDYLVKARLKEMSAYR 120
+ + VF+ I+ + S D D + + E PEV+E + ++G+ DYL+K ++ +S Y
Sbjct 62 KIGLGITVFVCIRCAEHSQDWLDNFLQIVNESPEVIEFYRLAGDIDYLLKLQVASISEYD 121
Query 121 RLLGDLLKKLPSSASSHSYIVMEEIKETLFL 151
RL L+ ++ + S + MEE+K + L
Sbjct 122 RLYKKLVSRVKLTDVS-AIFSMEELKHSTIL 151
>P56901 Leucine-responsive regulatory protein [Rhizobium meliloti
(strain 1021)]
Length=156
Score = 78.6 bits (192), Expect = 1e-22
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 0/150 (0%)
Query 4 LDRIDRQILDILQKEGRIAISELASRVNLSTTPCSERVKRLERDGIITGYHARLNPIYVD 63
LD ID +IL LQ +GRI ELA RV +S PC RV++LE G+I GY A LN +
Sbjct 7 LDAIDMKILRELQDDGRITNVELAERVGISAPPCLRRVRKLEEAGVIRGYRALLNASALG 66
Query 64 RNLLVFLEIKLSAKSGDVFDQVARDLVEIPEVLECHLISGEFDYLVKARLKEMSAYRRLL 123
+L+ F + L +S A P V E ++SGE D+L++ + +++++ +
Sbjct 67 YDLVAFCMVGLKHQSDANLKAFAARTASWPLVREAWMVSGESDFLLQCVAENLASFQDFV 126
Query 124 GDLLKKLPSSASSHSYIVMEEIKETLFLDV 153
+ L + + + + + ++K+ +++
Sbjct 127 IEELTATENVDTVRTMLTIRQVKDACQVEI 156
>O07920 Transcriptional regulator AzlB [Bacillus subtilis (strain
168)]
Length=157
Score = 72.4 bits (176), Expect = 3e-20
Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 0/150 (0%)
Query 4 LDRIDRQILDILQKEGRIAISELASRVNLSTTPCSERVKRLERDGIITGYHARLNPIYVD 63
LD D+ IL LQ++ I+ L+ ++ LS + C R K L GII + ++ +
Sbjct 5 LDETDKAILRDLQEDASISNLNLSKKIGLSPSACLARTKNLVEAGIIKKFTTIVDEKKLG 64
Query 64 RNLLVFLEIKLSAKSGDVFDQVARDLVEIPEVLECHLISGEFDYLVKARLKEMSAYRRLL 123
+ I LS + + D+ + P+V EC+ ++G DY++K K+M +YR +
Sbjct 65 IEVTALALINLSPLNRETIHSFLEDINKFPQVQECYTLTGSHDYMLKIVAKDMESYRNFI 124
Query 124 GDLLKKLPSSASSHSYIVMEEIKETLFLDV 153
D L + P+ + + IVM K T+ + +
Sbjct 125 IDSLMQNPAISGVDTSIVMSTEKRTVSVPI 154
>P50337 Uncharacterized HTH-type transcriptional regulator y4sM
[Sinorhizobium fredii (strain NBRC 101917 / NGR234)]
Length=127
Score = 67.8 bits (164), Expect = 8e-19
Identities = 32/109 (29%), Positives = 61/109 (56%), Gaps = 0/109 (0%)
Query 30 VNLSTTPCSERVKRLERDGIITGYHARLNPIYVDRNLLVFLEIKLSAKSGDVFDQVARDL 89
V LS + C R+K +E+ G+I GY A ++P + + V + I L ++ + D+ +
Sbjct 3 VGLSPSACLRRIKLMEQAGVIRGYTALVDPTQSESTIAVIINITLERQTEEYLDKFEAAV 62
Query 90 VEIPEVLECHLISGEFDYLVKARLKEMSAYRRLLGDLLKKLPSSASSHS 138
+ PE+ EC+L++G DY+++ ++ A+ R+ ++L LP HS
Sbjct 63 RKHPEIRECYLMTGGSDYMLRVDVENAGAFERIHKEVLSTLPGVLRIHS 111
Lambda K H a alpha
0.326 0.142 0.391 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 300480
Database: e18787b2056558dde1175a3f3f915494.SwissProt.fasta
Posted date: May 20, 2024 11:55 PM
Number of letters in database: 3,281
Number of sequences in database: 21
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
