BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: afaf55dd64c661774c9dd4e7023416b7.SwissProt.fasta
           1 sequences; 127 total letters



Query= ACIAD0143

Length=131
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

P44139 Protein HI_1253 [Haemophilus influenzae (strain ATCC 51907...  40.4    4e-10


>P44139 Protein HI_1253 [Haemophilus influenzae (strain ATCC 51907 
/ DSM 11121 / KW20 / Rd)]
Length=127

 Score = 40.4 bits (93),  Expect = 4e-10
 Identities = 25/87 (29%), Positives = 44/87 (51%), Gaps = 5/87 (6%)

Query  10  IHMTAVALSLLVFVFRAATLFVGVKGQQPNPVARVPLIATQHLSFSVVIVTGVILLFMKD  69
           +H+    LSL + V R A    G   +    +  +P     HLS +++IV+GV++L++  
Sbjct  19  LHIFFAFLSLALLVIRGAMQLNGKNWRSIKLLKILP-----HLSDTLLIVSGVVILYLFA  73

Query  70  FQVQPWFYAKIILFVVLLSSLHKAFKK  96
           F ++ W  AK  L ++ +    K F K
Sbjct  74  FGIEWWLVAKFALLILYIVFAAKFFSK  100


 Score = 15.8 bits (29),  Expect = 0.19
 Identities = 10/26 (38%), Positives = 12/26 (46%), Gaps = 2/26 (8%)

Query  16   ALSLLVFVFRAATLFVGVKGQQPNPV  41
            AL +L  VF A   F   K  QP  +
Sbjct  85   ALLILYIVFAAK--FFSKKVSQPKSI  108


 Score = 15.0 bits (27),  Expect = 0.34
 Identities = 11/26 (42%), Positives = 13/26 (50%), Gaps = 0/26 (0%)

Query  82   LFVVLLSSLHKAFKKDQDILLVQRRA  107
            L V++L  LH  F      LLV R A
Sbjct  11   LGVIMLVHLHIFFAFLSLALLVIRGA  36


 Score = 13.1 bits (22),  Expect = 1.5
 Identities = 6/12 (50%), Positives = 9/12 (75%), Gaps = 0/12 (0%)

Query  119  IISLVMIKPVFA  130
            I+S V+I  +FA
Sbjct  62   IVSGVVILYLFA  73



Lambda      K        H        a         alpha
   0.340    0.148    0.429    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 13221


  Database: afaf55dd64c661774c9dd4e7023416b7.SwissProt.fasta
    Posted date:  May 20, 2024  11:54 PM
  Number of letters in database: 127
  Number of sequences in database:  1



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40