BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 6395a2a26bd06de23384d0382173cbcf.SwissProt.fasta
15 sequences; 5,842 total letters
Query= ACIAD1765
Length=429
Score E
Sequences producing significant alignments: (Bits) Value
P27017 Aliphatic amidase expression-regulating protein [Pseudomon... 159 6e-48
Q8YBN1 Leu/Ile/Val-binding protein homolog 7 [Brucella melitensis... 73.6 2e-17
Q8FWP6 Leu/Ile/Val-binding protein homolog 7 [Brucella suis biova... 72.8 3e-17
Q577J0 Leu/Ile/Val-binding protein homolog 7 [Brucella abortus bi... 72.8 3e-17
Q2YK58 Leu/Ile/Val-binding protein homolog 7 [Brucella abortus (s... 72.8 3e-17
O85057 Limonene hydroxylase [Geobacillus stearothermophilus] 73.2 3e-17
P21175 Leucine-, isoleucine-, valine-, threonine-, and alanine-bi... 70.1 2e-16
Q1MDE9 Leu/Ile/Val-binding protein BraC3 [Rhizobium johnstonii (s... 62.0 8e-14
P04816 Leucine-specific-binding protein [Escherichia coli (strain... 55.1 1e-11
P0AD97 Leu/Ile/Val-binding protein [Escherichia coli O6:H1 (strai... 53.9 3e-11
P0AD98 Leu/Ile/Val-binding protein [Escherichia coli O157:H7] 53.9 3e-11
P0AD96 Leu/Ile/Val-binding protein [Escherichia coli (strain K12)] 53.9 3e-11
P17215 Leu/Ile/Val/Thr-binding protein [Salmonella typhimurium (s... 52.4 1e-10
P0A1W6 Leucine-specific-binding protein [Salmonella typhimurium (... 49.7 8e-10
Q9HUQ0 Amino acid binding protein [Pseudomonas aeruginosa (strain... 48.9 1e-09
>P27017 Aliphatic amidase expression-regulating protein [Pseudomonas
aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116
/ JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)]
Length=385
Score = 159 bits (402), Expect = 6e-48
Identities = 108/372 (29%), Positives = 179/372 (48%), Gaps = 16/372 (4%)
Query 52 VGILHSLSGTMAISETSLKDTALMTINEINAKGGVLGKKLEPVIVDPASDWPLFAEKARQ 111
+G+L S +G A E S + AL+ + ++N +GGV G+ +E + DP D + A
Sbjct 10 IGLLFSETGVTADIERSQRYGALLAVEQLNREGGVGGRPIETLSQDPGGDPDRYRLCAED 69
Query 112 LITQDKVAVIFGCWTSVSRKSVLPVVEELNGLLFYPVQYEGQEQSKNIFYTGAAPNQQAI 171
I V + GC+ S +RK+V+PVVE + LL YP YEG E S NI Y G APNQ +
Sbjct 70 FIRNRGVRFLVGCYMSHTRKAVMPVVERADALLCYPTPYEGFEYSPNIVYGGPAPNQNSA 129
Query 172 PAVEYLMSDEGGKAQRFVLLGTDYVYPRTTNKILRAFLKSKGVADADIMEE-YTPFGHNN 230
P YL+ G +R V +G+DY+YPR +N ++R + G ++EE Y P + +
Sbjct 130 PLAAYLIRHYG---ERVVFIGSDYIYPRESNHVMRHLYRQHG---GTVLEEIYIPL-YPS 182
Query 231 YQTIVANIKKFSAGKKTAVISTINGDSNVPFYRELGNQGIKASDIPVMAFSVGEEELRGI 290
+ +++ + V ST+ G YR + + P+ + + E E+ +
Sbjct 183 DDDVQRAVERIYQARADVVFSTVVGTGTAELYRAIARRYGDGRRPPIASLTTSEAEVAKM 242
Query 291 DTKPLVGHLAAWNYFMSVKNPKNTDFINKFKQYAVEYKLPNANKVVTNDPMEATYVGINM 350
++ G + YF S+ + F+ + E N +T EA Y +
Sbjct 243 ESDVAEGQVVVAPYFSSIDTAASRAFVQACHGFFPE------NATIT-AWAEAAYWQTLL 295
Query 351 WKQAVEKAGSTDVDKVRTAMAGQTFAAPSGYTLKMDDTNHHLHKPVMIGQIRADGQFDVV 410
+A + AGS V+ V+ + AP G ++++ N+H I +I A G F V
Sbjct 296 LGRAAQAAGSWRVEDVQRHLYDICIDAPQG-PVRVERQNNHSRLSSRIAEIDARGVFQVR 354
Query 411 YKTPNTIRAEPW 422
+++P IR +P+
Sbjct 355 WQSPEPIRPDPY 366
>Q8YBN1 Leu/Ile/Val-binding protein homolog 7 [Brucella melitensis
biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)]
Length=399
Score = 73.6 bits (179), Expect = 2e-17
Identities = 103/395 (26%), Positives = 164/395 (42%), Gaps = 41/395 (10%)
Query 38 AASAPVAQSGDTIKVGILHSLSGTMAISETSLKDTALMTINEINAKGGVLGKKLEPVIVD 97
A A A + IK+G L+ SG +A+ + + EINAKGGV G+K+ V D
Sbjct 12 ALLAGAAPASADIKMGSLYPFSGPLALLGDESARGLEIAVEEINAKGGVQGEKIVLVRGD 71
Query 98 PASDWPLFAEKARQLITQDKVAVIFGCWTSVSRKSVLPVVEELNGLLFYPVQYEGQEQS- 156
+ E AR+LI+ + VA IFG ++S R V EL GL ++ + E +
Sbjct 72 AVDNNQAIGE-ARRLISVENVAGIFGSFSS-GRAVAASQVSELAGLPYFELGAVADEITD 129
Query 157 ---KNIFYTGAAPNQQAIPAVEYLMS------DEGGKAQRFVLLGTDYVYPRTTNKILRA 207
+N++ A VE L K + ++ D Y + K
Sbjct 130 RGLENVYRANPYARDFAQMIVEMLQKKIAPKLGRDSKDLKIAVIYEDSSYGTSVAKHEET 189
Query 208 FLKSKGVADADIMEEYTPFGHNNYQTIVANIKKFSAGKKTAVISTINGDSNVPFYRELGN 267
FLK G+ ++ + P + ++V ++K SAG + ++ DS V F ++
Sbjct 190 FLKEAGL--NMVLSQSYPGNTVDMSSLVLDLK--SAGADVVLQTSYQSDS-VLFLQQANE 244
Query 268 QGIKASDIPVMAFSVGEEELRGIDTKPLVGH---LAAWNYFMSVKNPKNTDFINKFKQYA 324
G K S I + G L+ T VGH AA++ + + NT F +++
Sbjct 245 GGYKPSAI---VGAGGGYSLQ--PTADAVGHDVIEAAYDVDFT-QFAVNTSFTPGLEEFV 298
Query 325 VEYK-----LPNANKVVTNDPMEATYVGINMWKQAVEKAGSTDVDKVRTAMAGQTFAA-- 377
YK P + +TN YVG + +A+ K D V+ A++ A
Sbjct 299 EAYKKKYGETPRSGHSLTN------YVGAKVILEALNKVKGFDAAAVKQALSAVDIEAGK 352
Query 378 -PSGYTLKMDDTNHHLHKPVMIGQIRADGQFDVVY 411
GY K D N + + M+G DG+ VY
Sbjct 353 NAMGYGFKFDQNNQN-ERASMMGMQWQDGKLVTVY 386
>Q8FWP6 Leu/Ile/Val-binding protein homolog 7 [Brucella suis biovar
1 (strain 1330)]
Length=399
Score = 72.8 bits (177), Expect = 3e-17
Identities = 102/395 (26%), Positives = 165/395 (42%), Gaps = 41/395 (10%)
Query 38 AASAPVAQSGDTIKVGILHSLSGTMAISETSLKDTALMTINEINAKGGVLGKKLEPVIVD 97
A A A + IK+G L+ SG +A+ + + EINAKGGV G+K+ V D
Sbjct 12 ALLAGAAPASADIKMGSLYPFSGPLALLGDESARGLEIAVEEINAKGGVQGEKIVLVRGD 71
Query 98 PASDWPLFAEKARQLITQDKVAVIFGCWTSVSRKSVLPVVEELNGLLFYPVQYEGQEQS- 156
+ E AR+LI+ + VA IFG ++S R V EL G+ ++ + E +
Sbjct 72 AVDNNQAIGE-ARRLISVENVAGIFGTFSS-GRAVAASQVSELAGVPYFELGAVADEITD 129
Query 157 ---KNIFYTGAAPNQQAIPAVEYLMS------DEGGKAQRFVLLGTDYVYPRTTNKILRA 207
+N++ A VE L + K + ++ D Y + K
Sbjct 130 RGLENVYRANPYARDFAQMIVEMLQKKIAPKLGKDSKDLKIAVIYEDSSYGTSVAKHEET 189
Query 208 FLKSKGVADADIMEEYTPFGHNNYQTIVANIKKFSAGKKTAVISTINGDSNVPFYRELGN 267
FLK G+ ++ + P + ++V ++K SAG + ++ DS V F ++
Sbjct 190 FLKEAGL--NMVLSQSYPGNTVDMSSLVLDLK--SAGADVVLQTSYQSDS-VLFLQQANE 244
Query 268 QGIKASDIPVMAFSVGEEELRGIDTKPLVGH---LAAWNYFMSVKNPKNTDFINKFKQYA 324
G K S I + G L+ T VGH AA++ + + NT F +++
Sbjct 245 GGYKPSAI---VGAGGGYSLQ--PTADAVGHDVIEAAYDVDFT-QFAVNTSFTPGLEEFV 298
Query 325 VEYK-----LPNANKVVTNDPMEATYVGINMWKQAVEKAGSTDVDKVRTAMAGQTFAA-- 377
YK P + +TN YVG + +A+ K D V+ A++ A
Sbjct 299 EAYKKKYGETPRSGHSLTN------YVGAKVILEALNKVKGFDAAAVKQALSAVDIEAGK 352
Query 378 -PSGYTLKMDDTNHHLHKPVMIGQIRADGQFDVVY 411
GY K D N + + M+G DG+ VY
Sbjct 353 TAMGYGFKFDQNNQN-ERASMMGMQWQDGKLVTVY 386
>Q577J0 Leu/Ile/Val-binding protein homolog 7 [Brucella abortus
biovar 1 (strain 9-941)]
Length=399
Score = 72.8 bits (177), Expect = 3e-17
Identities = 102/395 (26%), Positives = 164/395 (42%), Gaps = 41/395 (10%)
Query 38 AASAPVAQSGDTIKVGILHSLSGTMAISETSLKDTALMTINEINAKGGVLGKKLEPVIVD 97
A A A + IK+G L+ SG +A+ + + EINAKGGV G+K+ V D
Sbjct 12 ALQAGAAPASADIKMGSLYPFSGPLALLGDESARGLEIAVEEINAKGGVQGEKIVLVRGD 71
Query 98 PASDWPLFAEKARQLITQDKVAVIFGCWTSVSRKSVLPVVEELNGLLFYPVQYEGQEQS- 156
+ E AR+LI+ + VA IFG ++S R V EL G+ ++ + E +
Sbjct 72 AVDNNQAIGE-ARRLISVENVAGIFGSFSS-GRAVAASQVSELAGVPYFELGAVADEITD 129
Query 157 ---KNIFYTGAAPNQQAIPAVEYLMS------DEGGKAQRFVLLGTDYVYPRTTNKILRA 207
+N++ A VE L K + ++ D Y + K
Sbjct 130 RGLENVYRANPYARDFAQMIVEMLQKKIAPKLGRDSKDLKIAVIYEDSSYGTSVAKHEET 189
Query 208 FLKSKGVADADIMEEYTPFGHNNYQTIVANIKKFSAGKKTAVISTINGDSNVPFYRELGN 267
FLK G+ ++ + P + ++V ++K SAG + ++ DS V F ++
Sbjct 190 FLKEAGL--NMVLSQSYPGNTVDMSSLVLDLK--SAGADVVLQTSYQSDS-VLFLQQANE 244
Query 268 QGIKASDIPVMAFSVGEEELRGIDTKPLVGH---LAAWNYFMSVKNPKNTDFINKFKQYA 324
G K S I + G L+ T VGH AA++ + + NT F +++
Sbjct 245 GGYKPSAI---VGAGGGYSLQ--PTADAVGHDVIEAAYDVDFT-QFAVNTSFTPGLEEFV 298
Query 325 VEYK-----LPNANKVVTNDPMEATYVGINMWKQAVEKAGSTDVDKVRTAMAGQTFAA-- 377
YK P + +TN YVG + +A+ K D V+ A++ A
Sbjct 299 EAYKKKYGETPRSGYSLTN------YVGAKVILEALNKVKGFDAAAVKQALSAVDIEAGK 352
Query 378 -PSGYTLKMDDTNHHLHKPVMIGQIRADGQFDVVY 411
GY K D N + + M+G DG+ VY
Sbjct 353 TAMGYGFKFDQNNQN-ERASMMGMQWQDGKLVTVY 386
>Q2YK58 Leu/Ile/Val-binding protein homolog 7 [Brucella abortus
(strain 2308)]
Length=399
Score = 72.8 bits (177), Expect = 3e-17
Identities = 102/395 (26%), Positives = 164/395 (42%), Gaps = 41/395 (10%)
Query 38 AASAPVAQSGDTIKVGILHSLSGTMAISETSLKDTALMTINEINAKGGVLGKKLEPVIVD 97
A A A + IK+G L+ SG +A+ + + EINAKGGV G+K+ V D
Sbjct 12 ALQAGAAPASADIKMGSLYPFSGPLALLGDESARGLEIAVEEINAKGGVQGEKIVLVRGD 71
Query 98 PASDWPLFAEKARQLITQDKVAVIFGCWTSVSRKSVLPVVEELNGLLFYPVQYEGQEQS- 156
+ E AR+LI+ + VA IFG ++S R V EL G+ ++ + E +
Sbjct 72 AVDNNQAIGE-ARRLISVENVAGIFGSFSS-GRAVAASQVSELAGVPYFELGAVADEITD 129
Query 157 ---KNIFYTGAAPNQQAIPAVEYLMS------DEGGKAQRFVLLGTDYVYPRTTNKILRA 207
+N++ A VE L K + ++ D Y + K
Sbjct 130 RGLENVYRANPYARDFAQMIVEMLQKKIAPKLGRDSKDLKIAVIYEDSSYGTSVAKHEET 189
Query 208 FLKSKGVADADIMEEYTPFGHNNYQTIVANIKKFSAGKKTAVISTINGDSNVPFYRELGN 267
FLK G+ ++ + P + ++V ++K SAG + ++ DS V F ++
Sbjct 190 FLKEAGL--NMVLSQSYPGNTVDMSSLVLDLK--SAGADVVLQTSYQSDS-VLFLQQANE 244
Query 268 QGIKASDIPVMAFSVGEEELRGIDTKPLVGH---LAAWNYFMSVKNPKNTDFINKFKQYA 324
G K S I + G L+ T VGH AA++ + + NT F +++
Sbjct 245 GGYKPSAI---VGAGGGYSLQ--PTADAVGHDVIEAAYDVDFT-QFAVNTSFTPGLEEFV 298
Query 325 VEYK-----LPNANKVVTNDPMEATYVGINMWKQAVEKAGSTDVDKVRTAMAGQTFAA-- 377
YK P + +TN YVG + +A+ K D V+ A++ A
Sbjct 299 EAYKKKYGETPRSGYSLTN------YVGAKVILEALNKVKGFDAAAVKQALSAVDIEAGK 352
Query 378 -PSGYTLKMDDTNHHLHKPVMIGQIRADGQFDVVY 411
GY K D N + + M+G DG+ VY
Sbjct 353 TAMGYGFKFDQNNQN-ERASMMGMQWQDGKLVTVY 386
>O85057 Limonene hydroxylase [Geobacillus stearothermophilus]
Length=543
Score = 73.2 bits (178), Expect = 3e-17
Identities = 44/130 (34%), Positives = 65/130 (50%), Gaps = 9/130 (7%)
Query 292 TKPLVGHLAAWNYFMSVKNPKNTDFINKFKQYAVEYKLPNANKVVTNDPMEATYVGINMW 351
+K GH + +YF S+ P+N F+ K+ V + M TY GI M
Sbjct 3 SKYAAGHYSCSSYFQSLDIPENRQFVQGMKKRY-------GQDTVISSVMANTYSGIQMI 55
Query 352 KQAVEKAGSTDVDKVRTAMAGQTFAAPSGYTLKMDDTNHHLHKPVMIGQIRADGQFDVVY 411
+A+ STD K+ + +TF +PSG ++NHHL + V IGQ DGQFD+V+
Sbjct 56 LEAIVHLRSTDRKKILNYLYNKTFPSPSGNITI--ESNHHLSREVRIGQANLDGQFDIVW 113
Query 412 KTPNTIRAEP 421
+ I A+P
Sbjct 114 SSEQPIPAKP 123
>P21175 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding
protein [Pseudomonas aeruginosa (strain ATCC 15692
/ DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS
101 / PAO1)]
Length=373
Score = 70.1 bits (170), Expect = 2e-16
Identities = 89/360 (25%), Positives = 145/360 (40%), Gaps = 23/360 (6%)
Query 24 GCSKSSDKPAEQAKAASAPVAQSGDTIKVGILHSLSGTMAISETSLKDTALMTINEINAK 83
G + S A A A A + + DTIK+ + ++G +A + ALM I +IN
Sbjct 4 GTQRLSRLFAAMAIAGFASYSMAADTIKIALAGPVTGPVAQYGDMQRAGALMAIEQINKA 63
Query 84 GGVLGKKLEPVIVDPASDWPLFAEKARQLITQDKVAVIFGCWTSVSRKSVLPVVEELNGL 143
GGV G +LE VI D A D P A + D V + G S S + + E+ L
Sbjct 64 GGVNGAQLEGVIYDDACD-PKQAVAVANKVVNDGVKFVVGHVCSSSTQPATDIYEDEGVL 122
Query 144 LFYPVQYEGQEQS---KNIFYTGAAPNQQAIPAVEYLMSDEGGKAQRFVLLGTDYVYPRT 200
+ P + S K IF T N Q A +++ E K + +L Y
Sbjct 123 MITPSATAPEITSRGYKLIFRTIGLDNMQGPVAGKFIA--ERYKDKTIAVLHDKQQYGEG 180
Query 201 TNKILRAFLKSKGVADADIMEEYTPFGHNNYQTIVANIKKFSAGKKTAVISTINGDSNVP 260
++ ++ G+ A + E G ++ +++ +KK AG + + + +
Sbjct 181 IATEVKKTVEDAGIKVA--VFEGLNAGDKDFNALISKLKK--AGVQFVYFGGYHPEMGL- 235
Query 261 FYRELGNQGIKASDIPVMAFSVGEEELRGIDTKPLVGHLAAWNYFMSVKNPKNTDFINKF 320
R+ G+ A + VG E+ I G LA ++PKN I+ F
Sbjct 236 LLRQAKQAGLDARFMG--PEGVGNSEITAIAGDASEGMLATLPRAFE-QDPKNKALIDAF 292
Query 321 KQYAVEYKLPNANKVVTNDPMEATYVGINMWKQAVEKAGSTDVDKVRTAMAGQTFAAPSG 380
K N+ + + Y + + + +EKAG D +KV A+ TF P+G
Sbjct 293 KA---------KNQDPSGIFVLPAYSAVTVIAKGIEKAGEADPEKVAEALRANTFETPTG 343
>Q1MDE9 Leu/Ile/Val-binding protein BraC3 [Rhizobium johnstonii
(strain DSM 114642 / LMG 32736 / 3841)]
Length=367
Score = 62.0 bits (149), Expect = 8e-14
Identities = 84/341 (25%), Positives = 145/341 (43%), Gaps = 31/341 (9%)
Query 36 AKAASAPVAQSGDTIKVGILHSLSGTMAISETSLKDTALMTINEINAKGGVLGKKLEPVI 95
A A AP+A + TI G++ L+G +A +K+ A ++EIN KGG+LG+K+ +
Sbjct 12 ASLAFAPLAHADITI--GLIAPLTGPVAAYGDQVKNGAQTAVDEINKKGGILGEKVVLEL 69
Query 96 VDPASDWPLFAEKARQLITQDKVAVIFGCWTSVSRKSVLPVVEELNGLLFYPVQYEGQEQ 155
D A + P A + D + + G TS V V+ E NG+L +
Sbjct 70 ADDAGE-PKQGVSAANKVVGDGIRFVVGPVTSGVAIPVSDVLAE-NGVLMVTPTATAPDL 127
Query 156 SK----NIFYTGAAPNQQAIPAVEYLMSDEGGKAQRFVLLGTDYVYPRTTNKILRAFLKS 211
+K N+ T +QQA A +Y++ + K +R ++ Y + +A L +
Sbjct 128 TKRGLTNVLRTCGRDDQQAEVAAKYVL--KNFKDKRVAIVNDKGAYGKGLADAFKATLNA 185
Query 212 KGVADADIMEEYTPFGHNNYQTIVANIKKFSAGKKTAVISTINGDSNVPFYRELGNQGIK 271
G+ + + + TP G ++ + IK +K V+ G ++ E G +
Sbjct 186 GGITEV-VNDAITP-GDKDFSALTTRIK----SEKVDVV-YFGG-----YHPEGGLLARQ 233
Query 272 ASDIPVMAFSVGEEELRGIDTKPLVGHLAAWNYFMSVKN-PKNTDFINKFKQYAVEYKLP 330
D+ A +G + L + + A F + + K+ D +K A+ K
Sbjct 234 LHDLAANATIIGGDGLSNTEFWAIGTDAAGGTIFTNASDATKSPD--SKAAADALAAKNI 291
Query 331 NANKVVTNDPMEATYVGINMWKQAVEKAGST-DVDKVRTAM 370
A N Y + + K +EKAGS D + V TA+
Sbjct 292 PAEAFTLN-----AYAAVEVLKAGIEKAGSAEDAEAVATAL 327
>P04816 Leucine-specific-binding protein [Escherichia coli (strain
K12)]
Length=369
Score = 55.1 bits (131), Expect = 1e-11
Identities = 75/323 (23%), Positives = 129/323 (40%), Gaps = 33/323 (10%)
Query 48 DTIKVGILHSLSGTMAISETSLKDTALMTINEINAKGGVLGKKLEPVIVDPASDWPLFAE 107
D IKV ++ ++SG +A + A I +INAKGG+ G KL V D A D P A
Sbjct 24 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACD-PKQAV 82
Query 108 KARQLITQDKVAVIFGCWTSVSRKSVLPVVEELNGLLFYPVQYE---GQEQSKNIFYTGA 164
I D + + G S S + + E+ L+ P Q ++I T
Sbjct 83 AVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAG 142
Query 165 APNQQAIPAVEYLMSDEGGKAQRFVLLGTDYVYPRTTNKILRAFLKSKGVADADIM-EEY 223
+ Q A +Y++ E K QR ++ Y + ++ LK+ A+A+++ +
Sbjct 143 LDSSQGPTAAKYIL--ETVKPQRIAIIHDKQQYGEGLARSVQDGLKA---ANANVVFFDG 197
Query 224 TPFGHNNYQTIVANIKKFSAGKKTAVISTINGDSNVPFYRELGNQGIKASDIPVMAFSVG 283
G ++ ++A +KK I+ +Y E+G +A + + +G
Sbjct 198 ITAGEKDFSALIARLKK----------ENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMG 247
Query 284 EEELRGIDTKPLVGHLAAWNYFMSVKNPKNTDFINKFKQYAVEYKLPNANKVVTNDP--- 340
E + + G A M V PK ++ Q + +A K DP
Sbjct 248 PEGVGNASLSNIAGDAAEG---MLVTMPK------RYDQDPANQGIVDALKADKKDPSGP 298
Query 341 -MEATYVGINMWKQAVEKAGSTD 362
+ TY + A+E+ GS +
Sbjct 299 YVWITYAAVQSLATALERTGSDE 321
>P0AD97 Leu/Ile/Val-binding protein [Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC)]
Length=367
Score = 53.9 bits (128), Expect = 3e-11
Identities = 77/336 (23%), Positives = 134/336 (40%), Gaps = 26/336 (8%)
Query 48 DTIKVGILHSLSGTMAISETSLKDTALMTINEINAKGGVLGKKLEPVIVDPASDWPLFAE 107
+ IKV ++ ++SG +A A + +INAKGG+ G KL+ V D A D P A
Sbjct 24 EDIKVAVVGAMSGPVAQYGDQEFTGAEQAVADINAKGGIKGNKLQIVKYDDACD-PKQAV 82
Query 108 KARQLITQDKVAVIFGCWTSVSRKSVLPVVEELNGLLFYPVQYEGQEQSKN---IFYTGA 164
+ D + + G S S + + E+ L+ P + ++ I T
Sbjct 83 AVANKVVNDGIKYVIGHLCSSSTQPASDIYEDEGILMITPAATAPELTARGYQLILRTTG 142
Query 165 APNQQAIPAVEYLMSDEGGKAQRFVLLGTDYVYPRTTNKILRAFLKSKGVADADIMEEYT 224
+ Q A +Y++ E K QR ++ Y + ++ LK KG A+ + T
Sbjct 143 LDSDQGPTAAKYIL--EKVKPQRIAIVHDKQQYGEGLARAVQDGLK-KGNANVVFFDGIT 199
Query 225 PFGHNNYQTIVANIKKFSAGKKTAVISTINGDSNVPFYRELGNQGIKASDIPVMAFSVGE 284
G ++ T+VA +KK I+ ++ E+G +A + +G
Sbjct 200 A-GEKDFSTLVARLKK----------ENIDFVYYGGYHPEMGQILRQARAAGLKTQFMGP 248
Query 285 EELRGIDTKPLVGHLAAWNYFMSVKNPKNTDFI--NKFKQYAVEYKLPNANKV---VTND 339
E + + + G A + V PKN D + NK A++ K + + T
Sbjct 249 EGVANVSLSNIAGESAEG---LLVTKPKNYDQVPANKPIVDAIKAKKQDPSGAFVWTTYA 305
Query 340 PMEATYVGINMWKQAVEKAGSTDVDKVRTAMAGQTF 375
+++ G+N E A + V T M T+
Sbjct 306 ALQSLQAGLNQSDDPAEIAKYLKANSVDTVMGPLTW 341
>P0AD98 Leu/Ile/Val-binding protein [Escherichia coli O157:H7]
Length=367
Score = 53.9 bits (128), Expect = 3e-11
Identities = 77/336 (23%), Positives = 134/336 (40%), Gaps = 26/336 (8%)
Query 48 DTIKVGILHSLSGTMAISETSLKDTALMTINEINAKGGVLGKKLEPVIVDPASDWPLFAE 107
+ IKV ++ ++SG +A A + +INAKGG+ G KL+ V D A D P A
Sbjct 24 EDIKVAVVGAMSGPVAQYGDQEFTGAEQAVADINAKGGIKGNKLQIVKYDDACD-PKQAV 82
Query 108 KARQLITQDKVAVIFGCWTSVSRKSVLPVVEELNGLLFYPVQYEGQEQSKN---IFYTGA 164
+ D + + G S S + + E+ L+ P + ++ I T
Sbjct 83 AVANKVVNDGIKYVIGHLCSSSTQPASDIYEDEGILMITPAATAPELTARGYQLILRTTG 142
Query 165 APNQQAIPAVEYLMSDEGGKAQRFVLLGTDYVYPRTTNKILRAFLKSKGVADADIMEEYT 224
+ Q A +Y++ E K QR ++ Y + ++ LK KG A+ + T
Sbjct 143 LDSDQGPTAAKYIL--EKVKPQRIAIVHDKQQYGEGLARAVQDGLK-KGNANVVFFDGIT 199
Query 225 PFGHNNYQTIVANIKKFSAGKKTAVISTINGDSNVPFYRELGNQGIKASDIPVMAFSVGE 284
G ++ T+VA +KK I+ ++ E+G +A + +G
Sbjct 200 A-GEKDFSTLVARLKK----------ENIDFVYYGGYHPEMGQILRQARAAGLKTQFMGP 248
Query 285 EELRGIDTKPLVGHLAAWNYFMSVKNPKNTDFI--NKFKQYAVEYKLPNANKV---VTND 339
E + + + G A + V PKN D + NK A++ K + + T
Sbjct 249 EGVANVSLSNIAGESAEG---LLVTKPKNYDQVPANKPIVDAIKAKKQDPSGAFVWTTYA 305
Query 340 PMEATYVGINMWKQAVEKAGSTDVDKVRTAMAGQTF 375
+++ G+N E A + V T M T+
Sbjct 306 ALQSLQAGLNQSDDPAEIAKYLKANSVDTVMGPLTW 341
>P0AD96 Leu/Ile/Val-binding protein [Escherichia coli (strain
K12)]
Length=367
Score = 53.9 bits (128), Expect = 3e-11
Identities = 77/336 (23%), Positives = 134/336 (40%), Gaps = 26/336 (8%)
Query 48 DTIKVGILHSLSGTMAISETSLKDTALMTINEINAKGGVLGKKLEPVIVDPASDWPLFAE 107
+ IKV ++ ++SG +A A + +INAKGG+ G KL+ V D A D P A
Sbjct 24 EDIKVAVVGAMSGPVAQYGDQEFTGAEQAVADINAKGGIKGNKLQIVKYDDACD-PKQAV 82
Query 108 KARQLITQDKVAVIFGCWTSVSRKSVLPVVEELNGLLFYPVQYEGQEQSKN---IFYTGA 164
+ D + + G S S + + E+ L+ P + ++ I T
Sbjct 83 AVANKVVNDGIKYVIGHLCSSSTQPASDIYEDEGILMITPAATAPELTARGYQLILRTTG 142
Query 165 APNQQAIPAVEYLMSDEGGKAQRFVLLGTDYVYPRTTNKILRAFLKSKGVADADIMEEYT 224
+ Q A +Y++ E K QR ++ Y + ++ LK KG A+ + T
Sbjct 143 LDSDQGPTAAKYIL--EKVKPQRIAIVHDKQQYGEGLARAVQDGLK-KGNANVVFFDGIT 199
Query 225 PFGHNNYQTIVANIKKFSAGKKTAVISTINGDSNVPFYRELGNQGIKASDIPVMAFSVGE 284
G ++ T+VA +KK I+ ++ E+G +A + +G
Sbjct 200 A-GEKDFSTLVARLKK----------ENIDFVYYGGYHPEMGQILRQARAAGLKTQFMGP 248
Query 285 EELRGIDTKPLVGHLAAWNYFMSVKNPKNTDFI--NKFKQYAVEYKLPNANKV---VTND 339
E + + + G A + V PKN D + NK A++ K + + T
Sbjct 249 EGVANVSLSNIAGESAEG---LLVTKPKNYDQVPANKPIVDAIKAKKQDPSGAFVWTTYA 305
Query 340 PMEATYVGINMWKQAVEKAGSTDVDKVRTAMAGQTF 375
+++ G+N E A + V T M T+
Sbjct 306 ALQSLQAGLNQSDDPAEIAKYLKANSVDTVMGPLTW 341
>P17215 Leu/Ile/Val/Thr-binding protein [Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720)]
Length=365
Score = 52.4 bits (124), Expect = 1e-10
Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 8/196 (4%)
Query 48 DTIKVGILHSLSGTMAISETSLKDTALMTINEINAKGGVLGKKLEPVIVDPASDWPLFAE 107
D IKV ++ ++SG +A A I +INAKGG+ G KL V D A D P A
Sbjct 22 DDIKVAVVGAMSGPVAQYGDQEFTGAEQAIADINAKGGIKGDKLVAVKYDDACD-PKQAV 80
Query 108 KARQLITQDKVAVIFGCWTSVSRKSVLPVVEELNGLLFYPVQYEGQEQS---KNIFYTGA 164
+ D + + G S S + + E+ L+ P + + K + T
Sbjct 81 AVANKVVNDGIKYVIGHLCSSSTQPASDIYEDEGILMITPAATAPELTARGYKLVLRTTG 140
Query 165 APNQQAIPAVEYLMSDEGGKAQRFVLLGTDYVYPRTTNKILRAFLKSKGVADADIMEEYT 224
+ Q A +Y++ E K QR ++ Y + ++ LK GV + +
Sbjct 141 LDSDQGPTAAKYIL--EKVKPQRIAIIHDKQQYGEGLARAVQDGLKKGGV--NVVFFDGI 196
Query 225 PFGHNNYQTIVANIKK 240
G ++ T+VA +KK
Sbjct 197 TAGEKDFSTLVARLKK 212
>P0A1W6 Leucine-specific-binding protein [Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720)]
Length=369
Score = 49.7 bits (117), Expect = 8e-10
Identities = 51/196 (26%), Positives = 84/196 (43%), Gaps = 8/196 (4%)
Query 48 DTIKVGILHSLSGTMAISETSLKDTALMTINEINAKGGVLGKKLEPVIVDPASDWPLFAE 107
D IKV I+ ++SG +A + A I +INAKGG+ G KL V D A D P A
Sbjct 24 DDIKVAIVGAMSGPVAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACD-PKQAV 82
Query 108 KARQLITQDKVAVIFGCWTSVSRKSVLPVVEELNGLLFYPVQYEGQEQSKNIFY---TGA 164
I D + + G S S + + E+ L+ P + + Y T
Sbjct 83 AVANKIVNDGIQYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQYIMRTAG 142
Query 165 APNQQAIPAVEYLMSDEGGKAQRFVLLGTDYVYPRTTNKILRAFLKSKGVADADIMEEYT 224
+ Q A +Y++ E K QR ++ Y + ++ LK +G A+ + T
Sbjct 143 LDSSQGPTAAKYIL--ETVKPQRIAIIHDKQQYGEGLARSVQDGLK-QGNANIVFFDGIT 199
Query 225 PFGHNNYQTIVANIKK 240
G ++ ++A ++K
Sbjct 200 A-GEKDFSALIARLQK 214
>Q9HUQ0 Amino acid binding protein [Pseudomonas aeruginosa (strain
ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228
/ 1C / PRS 101 / PAO1)]
Length=374
Score = 48.9 bits (115), Expect = 1e-09
Identities = 46/203 (23%), Positives = 88/203 (43%), Gaps = 10/203 (5%)
Query 73 ALMTINEINAKGGVLGKKLEPVIVDPASDWPLFAEKARQLITQDKVAVIFGCWTSVSRKS 132
A +INA GG+ G+K++ V D A + A +L+ QDK + G + S S
Sbjct 52 ASQAAEDINAAGGINGEKIKLVKADDACEPKQAVAVANRLVDQDKAIAVVGHFCSSSTIP 111
Query 133 VLPVVEELNGLLFYPVQYEGQEQSKNI---FYTGAAPNQQAIPAVEYLMSDEGGKAQRFV 189
V +E + P Q + + F +QQ + A +Y+++ KA++
Sbjct 112 ASEVYDEAGIIAITPGSTNPQVTERGLSGMFRMCGRDDQQGVVAGDYIVNVL--KAKKVA 169
Query 190 LLGTDYVYPRTTNKILRAFLKSKGVADADIMEEYTPFGHNNYQTIVANIKKFSAGKKTAV 249
++ Y + RA L GV +++ E G ++ +V I+ ++G +
Sbjct 170 VIHDKDTYGQGLADATRAQLNKLGV--KEVLYEGLTRGEKDFNALVTKIR--ASGAEVVY 225
Query 250 ISTINGDSNVPFYRELGNQGIKA 272
++ ++ P R++ QG+ A
Sbjct 226 FGGLHPEAG-PLVRQMREQGLTA 247
Lambda K H a alpha
0.317 0.132 0.386 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1929868
Database: 6395a2a26bd06de23384d0382173cbcf.SwissProt.fasta
Posted date: May 20, 2024 10:51 PM
Number of letters in database: 5,842
Number of sequences in database: 15
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
