BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: dd4c96d97922f5bec95323f18fc69613.SwissProt.fasta
           5 sequences; 548 total letters



Query= ACIAD3133

Length=101
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

P0AB57 Protein YciI [Shigella flexneri]                               98.6    9e-33
P0AB56 Protein YciI [Escherichia coli O6:H1 (strain CFT073 / ATCC...  98.6    9e-33
P0AB55 Protein YciI [Escherichia coli (strain K12)]                   98.6    9e-33
P44887 Uncharacterized protein HI_0828 [Haemophilus influenzae (s...  80.9    8e-26
Q5AUZ7 Aspercryptin biosynthesis cluster protein B [Emericella ni...  40.0    2e-09


>P0AB57 Protein YciI [Shigella flexneri]
Length=98

 Score = 98.6 bits (244),  Expect = 9e-33
 Identities = 47/97 (48%), Positives = 62/97 (64%), Gaps = 2/97 (2%)

Query  3   LFVVTCTDNEGTVEKRLATRPKHVERLQKLDDEGKLIVAGAMPKEFGNPQ--AGFYGSTI  60
           L+V+   D   ++EKRL+ RP H+ RLQ L DEG+L+ AG MP    N    AGF GST+
Sbjct  2   LYVIYAQDKADSLEKRLSVRPAHLARLQLLHDEGRLLTAGPMPAVDSNDPGAAGFTGSTV  61

Query  61  IVDFESREALDAWLQEEPFLIEGIYAHIDVKPFNKAF  97
           I +FES EA  AW   +P++  G+Y H+ VKPF K F
Sbjct  62  IAEFESLEAAQAWADADPYVAAGVYEHVSVKPFKKVF  98


>P0AB56 Protein YciI [Escherichia coli O6:H1 (strain CFT073 / 
ATCC 700928 / UPEC)]
Length=98

 Score = 98.6 bits (244),  Expect = 9e-33
 Identities = 47/97 (48%), Positives = 62/97 (64%), Gaps = 2/97 (2%)

Query  3   LFVVTCTDNEGTVEKRLATRPKHVERLQKLDDEGKLIVAGAMPKEFGNPQ--AGFYGSTI  60
           L+V+   D   ++EKRL+ RP H+ RLQ L DEG+L+ AG MP    N    AGF GST+
Sbjct  2   LYVIYAQDKADSLEKRLSVRPAHLARLQLLHDEGRLLTAGPMPAVDSNDPGAAGFTGSTV  61

Query  61  IVDFESREALDAWLQEEPFLIEGIYAHIDVKPFNKAF  97
           I +FES EA  AW   +P++  G+Y H+ VKPF K F
Sbjct  62  IAEFESLEAAQAWADADPYVAAGVYEHVSVKPFKKVF  98


>P0AB55 Protein YciI [Escherichia coli (strain K12)]
Length=98

 Score = 98.6 bits (244),  Expect = 9e-33
 Identities = 47/97 (48%), Positives = 62/97 (64%), Gaps = 2/97 (2%)

Query  3   LFVVTCTDNEGTVEKRLATRPKHVERLQKLDDEGKLIVAGAMPKEFGNPQ--AGFYGSTI  60
           L+V+   D   ++EKRL+ RP H+ RLQ L DEG+L+ AG MP    N    AGF GST+
Sbjct  2   LYVIYAQDKADSLEKRLSVRPAHLARLQLLHDEGRLLTAGPMPAVDSNDPGAAGFTGSTV  61

Query  61  IVDFESREALDAWLQEEPFLIEGIYAHIDVKPFNKAF  97
           I +FES EA  AW   +P++  G+Y H+ VKPF K F
Sbjct  62  IAEFESLEAAQAWADADPYVAAGVYEHVSVKPFKKVF  98


>P44887 Uncharacterized protein HI_0828 [Haemophilus influenzae 
(strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=98

 Score = 80.9 bits (198),  Expect = 8e-26
 Identities = 41/96 (43%), Positives = 61/96 (64%), Gaps = 2/96 (2%)

Query  4   FVVTCTDNEGTVEKRLATRPKHVERLQKLDDEGKLIVAGAMPK-EFGNP-QAGFYGSTII  61
           +V+   D   T+EKRLA R +H+ RL++L  E +L+ AG  P  +  NP +AGF GST+I
Sbjct  3   YVIFAQDIPNTLEKRLAVREQHLARLKQLQAENRLLTAGPNPAIDDENPSEAGFTGSTVI  62

Query  62  VDFESREALDAWLQEEPFLIEGIYAHIDVKPFNKAF  97
             FE+ +A   W  ++P++  G+YA + VKPF K F
Sbjct  63  AQFENLQAAKDWAAQDPYVEAGVYADVIVKPFKKVF  98


>Q5AUZ7 Aspercryptin biosynthesis cluster protein B [Emericella 
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 
194 / M139)]
Length=156

 Score = 40.0 bits (92),  Expect = 2e-09
 Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 3/85 (4%)

Query  4    FVVTCTDNEGTVEKRLATRPKHVERLQKLDDEGKLIVAGAMPKEF---GNPQAGFYGSTI  60
            ++V   D    +++RL  RP+H     +L  E  +  AG + ++    GNP+  F GS +
Sbjct  52   WLVLFPDMPNVLDRRLEIRPRHSPNFVRLHKEQWVTWAGPIFEKHTFPGNPRRPFKGSVM  111

Query  61   IVDFESREALDAWLQEEPFLIEGIY  85
            +V+  S+E +   L+ +P++ E I+
Sbjct  112  VVNDVSKEQIWERLKSDPYIQERIW  136


 Score = 15.4 bits (28),  Expect = 0.81
 Identities = 7/18 (39%), Positives = 11/18 (61%), Gaps = 0/18 (0%)

Query  17   KRLATRPKHVERLQKLDD  34
            +RL + P   ER+  LD+
Sbjct  123  ERLKSDPYIQERIWDLDN  140


 Score = 12.7 bits (21),  Expect = 6.8
 Identities = 4/20 (20%), Positives = 10/20 (50%), Gaps = 0/20 (0%)

Query  73  WLQEEPFLIEGIYAHIDVKP  92
           WL   P +   +   ++++P
Sbjct  52  WLVLFPDMPNVLDRRLEIRP  71



Lambda      K        H        a         alpha
   0.324    0.143    0.435    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 35440


  Database: dd4c96d97922f5bec95323f18fc69613.SwissProt.fasta
    Posted date:  May 20, 2024  9:38 PM
  Number of letters in database: 548
  Number of sequences in database:  5



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40