BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 8de439243cced6f84d0f54ac01a5c8d9.SwissProt.fasta
1 sequences; 111 total letters
Query= ACIAD3143
Length=120
Score E
Sequences producing significant alignments: (Bits) Value
P22978 Rhodanese domain-containing protein CG4456 [Drosophila mel... 32.0 3e-07
>P22978 Rhodanese domain-containing protein CG4456 [Drosophila
melanogaster]
Length=111
Score = 32.0 bits (71), Expect = 3e-07
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 6/62 (10%)
Query 61 AKISLIYQPIDQAKNAQTDIQAFA-RYYNSLPK---PILIMCKSGQRSMELYQQAKQQGL 116
A I++ +D+A N D AF +Y S P+ PI+ C+SG R +E + AK QG
Sbjct 35 ASINIPLDELDKALNL--DGSAFKNKYGRSKPEKQSPIIFTCRSGNRVLEAEKIAKSQGY 92
Query 117 LN 118
N
Sbjct 93 SN 94
Lambda K H a alpha
0.323 0.135 0.384 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 10486
Database: 8de439243cced6f84d0f54ac01a5c8d9.SwissProt.fasta
Posted date: May 20, 2024 11:30 PM
Number of letters in database: 111
Number of sequences in database: 1
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40