ACIAD3143 / SwissProt Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 8de439243cced6f84d0f54ac01a5c8d9.SwissProt.fasta
           1 sequences; 111 total letters



Query= ACIAD3143

Length=120
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

P22978 Rhodanese domain-containing protein CG4456 [Drosophila mel...  32.0    3e-07


>P22978 Rhodanese domain-containing protein CG4456 [Drosophila 
melanogaster]
Length=111

 Score = 32.0 bits (71),  Expect = 3e-07
 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 6/62 (10%)

Query  61   AKISLIYQPIDQAKNAQTDIQAFA-RYYNSLPK---PILIMCKSGQRSMELYQQAKQQGL  116
            A I++    +D+A N   D  AF  +Y  S P+   PI+  C+SG R +E  + AK QG 
Sbjct  35   ASINIPLDELDKALNL--DGSAFKNKYGRSKPEKQSPIIFTCRSGNRVLEAEKIAKSQGY  92

Query  117  LN  118
             N
Sbjct  93   SN  94



Lambda      K        H        a         alpha
   0.323    0.135    0.384    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 10486


  Database: 8de439243cced6f84d0f54ac01a5c8d9.SwissProt.fasta
    Posted date:  May 20, 2024  11:30 PM
  Number of letters in database: 111
  Number of sequences in database:  1



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40