BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: e8617e00c8ea571af96aa0bc98e9ca41.SwissProt.fasta
1 sequences; 255 total letters
Query= ACIAD3173
Length=183
Score E
Sequences producing significant alignments: (Bits) Value
Q135D0 Octanoyltransferase [Rhodopseudomonas palustris (strain Bi... 33.5 1e-06
>Q135D0 Octanoyltransferase [Rhodopseudomonas palustris (strain
BisB5)]
Length=255
Score = 33.5 bits (75), Expect = 1e-06
Identities = 21/51 (41%), Positives = 27/51 (53%), Gaps = 5/51 (10%)
Query 108 YQFGKSEQGIDLYQDRFEIYATGRKQQFTYSDVAHFAVGKLTY-MIELKNR 157
Y G S Q DL RF ++ATGR Q TY H ++ Y M++LK R
Sbjct 69 YTSGTSGQAADLLDPRFPLHATGRGGQLTY----HGPGQRVAYVMLDLKRR 115
Lambda K H a alpha
0.332 0.146 0.449 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 37513
Database: e8617e00c8ea571af96aa0bc98e9ca41.SwissProt.fasta
Posted date: May 20, 2024 10:10 PM
Number of letters in database: 255
Number of sequences in database: 1
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40