Comparative Genomics

ACIAD3264 / TrEMBL Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 67a65aaefe2c225958c85eb24e1ac32a.TrEMBL.fasta
           19 sequences; 1,677 total letters



Query= ACIAD3264

Length=90
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

A0A7G2SH86 PspC domain-containing protein [Acinetobacter sp]          183     4e-66
Q6F7M2 Phage shock protein PspC N-terminal domain-containing prot...  183     4e-66
A0A1P8EK34 PspC domain-containing protein [Acinetobacter soli]        147     4e-52
A0A0M1I8D5 PspC family transcriptional regulator [Acinetobacter s...  147     4e-52
N9C0W5 Phage shock protein PspC N-terminal domain-containing prot...  147     4e-52
A0A3D2SJN4 PspC domain-containing protein [Acinetobacter ursingii]    144     1e-50
A0A427PT34 PspC domain-containing protein [Acinetobacter sp. FDAA...  144     1e-50
N9DDC2 Phage shock protein PspC N-terminal domain-containing prot...  144     1e-50
A0A009YNW5 PspC domain protein [Acinetobacter sp. 479375]             143     2e-50
A0A7T9UKA2 PspC domain-containing protein [Acinetobacter ursingii]    143     2e-50
A0A3A8EQI7 PspC domain-containing protein [Acinetobacter guerrae]     141     2e-49
N9PBF2 Phage shock protein PspC N-terminal domain-containing prot...  139     1e-48
A0A7Y8Q137 PspC domain-containing protein [Acinetobacter sp. SwsAc6]  139     1e-48
A0A3A8G426 PspC domain-containing protein [Acinetobacter cumulans]    139     1e-48
A0A3A8FMZ5 PspC domain-containing protein [Acinetobacter sp. WCHA...  138     2e-48
A0A0F3LNX7 PspC domain-containing protein [Acinetobacter indicus]     136     1e-47
A0A6C0YQJ4 PspC domain-containing protein [Acinetobacter indicus]     135     2e-47
V2VI99 Phage shock protein PspC N-terminal domain-containing prot...  135     2e-47
N9KSS9 Phage shock protein PspC N-terminal domain-containing prot...  135     2e-47


>A0A7G2SH86 PspC domain-containing protein [Acinetobacter sp]
Length=89

 Score = 183 bits (464),  Expect = 4e-66
 Identities = 89/89 (100%), Positives = 89/89 (100%), Gaps = 0/89 (0%)

Query  1   MANAGLYRSNRQHIIAGVMGGIAERFGWNANLLRLIFVVVSVMSAAFPGILVYLILWLVI  60
           MANAGLYRSNRQHIIAGVMGGIAERFGWNANLLRLIFVVVSVMSAAFPGILVYLILWLVI
Sbjct  1   MANAGLYRSNRQHIIAGVMGGIAERFGWNANLLRLIFVVVSVMSAAFPGILVYLILWLVI  60

Query  61  PKRPQQLEYQAMKGYEHPVRTVHEDHQRR  89
           PKRPQQLEYQAMKGYEHPVRTVHEDHQRR
Sbjct  61  PKRPQQLEYQAMKGYEHPVRTVHEDHQRR  89


>Q6F7M2 Phage shock protein PspC N-terminal domain-containing 
protein [Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)]
Length=89

 Score = 183 bits (464),  Expect = 4e-66
 Identities = 89/89 (100%), Positives = 89/89 (100%), Gaps = 0/89 (0%)

Query  1   MANAGLYRSNRQHIIAGVMGGIAERFGWNANLLRLIFVVVSVMSAAFPGILVYLILWLVI  60
           MANAGLYRSNRQHIIAGVMGGIAERFGWNANLLRLIFVVVSVMSAAFPGILVYLILWLVI
Sbjct  1   MANAGLYRSNRQHIIAGVMGGIAERFGWNANLLRLIFVVVSVMSAAFPGILVYLILWLVI  60

Query  61  PKRPQQLEYQAMKGYEHPVRTVHEDHQRR  89
           PKRPQQLEYQAMKGYEHPVRTVHEDHQRR
Sbjct  61  PKRPQQLEYQAMKGYEHPVRTVHEDHQRR  89


>A0A1P8EK34 PspC domain-containing protein [Acinetobacter soli]
Length=90

 Score = 147 bits (372),  Expect = 4e-52
 Identities = 70/90 (78%), Positives = 80/90 (89%), Gaps = 1/90 (1%)

Query  1   MANAGLYRSNRQHIIAGVMGGIAERFGWNANLLRLIFVVVSVMSAAFPGILVYLILWLVI  60
           MA  GLYRSNRQH+IAGVMGGIAERFGWNANLLRLIF+V+S+MSAAFPGILVYLILWLV+
Sbjct  1   MATTGLYRSNRQHMIAGVMGGIAERFGWNANLLRLIFIVISLMSAAFPGILVYLILWLVM  60

Query  61  PKRPQQLEYQAM-KGYEHPVRTVHEDHQRR  89
           PK+P++L Y  + +GY HPVRTVHED   R
Sbjct  61  PKQPKRLAYSTVNEGYSHPVRTVHEDRHSR  90


>A0A0M1I8D5 PspC family transcriptional regulator [Acinetobacter 
sp. C15]
Length=90

 Score = 147 bits (372),  Expect = 4e-52
 Identities = 70/90 (78%), Positives = 80/90 (89%), Gaps = 1/90 (1%)

Query  1   MANAGLYRSNRQHIIAGVMGGIAERFGWNANLLRLIFVVVSVMSAAFPGILVYLILWLVI  60
           MA  GLYRSNRQH+IAGVMGGIAERFGWNANLLRLIF+V+S+MSAAFPGILVYLILWLV+
Sbjct  1   MATTGLYRSNRQHMIAGVMGGIAERFGWNANLLRLIFIVISLMSAAFPGILVYLILWLVM  60

Query  61  PKRPQQLEYQAM-KGYEHPVRTVHEDHQRR  89
           PK+P++L Y  + +GY HPVRTVHED   R
Sbjct  61  PKQPKRLAYSTVNEGYSHPVRTVHEDRHSR  90


>N9C0W5 Phage shock protein PspC N-terminal domain-containing 
protein [Acinetobacter soli NIPH 2899]
Length=90

 Score = 147 bits (372),  Expect = 4e-52
 Identities = 70/90 (78%), Positives = 80/90 (89%), Gaps = 1/90 (1%)

Query  1   MANAGLYRSNRQHIIAGVMGGIAERFGWNANLLRLIFVVVSVMSAAFPGILVYLILWLVI  60
           MA  GLYRSNRQH+IAGVMGGIAERFGWNANLLRLIF+V+S+MSAAFPGILVYLILWLV+
Sbjct  1   MATTGLYRSNRQHMIAGVMGGIAERFGWNANLLRLIFIVISLMSAAFPGILVYLILWLVM  60

Query  61  PKRPQQLEYQAM-KGYEHPVRTVHEDHQRR  89
           PK+P++L Y  + +GY HPVRTVHED   R
Sbjct  61  PKQPKRLAYSTVNEGYSHPVRTVHEDRHSR  90


>A0A3D2SJN4 PspC domain-containing protein [Acinetobacter ursingii]
Length=88

 Score = 144 bits (362),  Expect = 1e-50
 Identities = 68/89 (76%), Positives = 80/89 (90%), Gaps = 2/89 (2%)

Query  1   MANAGLYRSNRQHIIAGVMGGIAERFGWNANLLRLIFVVVSVMSAAFPGILVYLILWLVI  60
           MAN GLYRSNRQH+IAGVMGGIAERFGWNANLLRLIFV++SVMSAAFPGILVYLILWLV+
Sbjct  1   MANTGLYRSNRQHLIAGVMGGIAERFGWNANLLRLIFVIISVMSAAFPGILVYLILWLVM  60

Query  61  PKRPQQLEYQAMKGYEHPVRTVHEDHQRR  89
           PK+ ++L YQ  + Y+ P+RTVHE+ + R
Sbjct  61  PKQTERLPYQ--QSYQQPIRTVHEEQRMR  87


>A0A427PT34 PspC domain-containing protein [Acinetobacter sp. 
FDAARGOS_515]
Length=88

 Score = 144 bits (362),  Expect = 1e-50
 Identities = 68/89 (76%), Positives = 80/89 (90%), Gaps = 2/89 (2%)

Query  1   MANAGLYRSNRQHIIAGVMGGIAERFGWNANLLRLIFVVVSVMSAAFPGILVYLILWLVI  60
           MAN GLYRSNRQH+IAGVMGGIAERFGWNANLLRLIFV++SVMSAAFPGILVYLILWLV+
Sbjct  1   MANTGLYRSNRQHLIAGVMGGIAERFGWNANLLRLIFVIISVMSAAFPGILVYLILWLVM  60

Query  61  PKRPQQLEYQAMKGYEHPVRTVHEDHQRR  89
           PK+ ++L YQ  + Y+ P+RTVHE+ + R
Sbjct  61  PKQTERLPYQ--QSYQQPIRTVHEEQRMR  87


>N9DDC2 Phage shock protein PspC N-terminal domain-containing 
protein [Acinetobacter ursingii ANC 3649]
Length=88

 Score = 144 bits (362),  Expect = 1e-50
 Identities = 68/89 (76%), Positives = 80/89 (90%), Gaps = 2/89 (2%)

Query  1   MANAGLYRSNRQHIIAGVMGGIAERFGWNANLLRLIFVVVSVMSAAFPGILVYLILWLVI  60
           MAN GLYRSNRQH+IAGVMGGIAERFGWNANLLRLIFV++SVMSAAFPGILVYLILWLV+
Sbjct  1   MANTGLYRSNRQHLIAGVMGGIAERFGWNANLLRLIFVIISVMSAAFPGILVYLILWLVM  60

Query  61  PKRPQQLEYQAMKGYEHPVRTVHEDHQRR  89
           PK+ ++L YQ  + Y+ P+RTVHE+ + R
Sbjct  61  PKQTERLPYQ--QSYQQPIRTVHEEQRMR  87


>A0A009YNW5 PspC domain protein [Acinetobacter sp. 479375]
Length=88

 Score = 143 bits (361),  Expect = 2e-50
 Identities = 67/89 (75%), Positives = 80/89 (90%), Gaps = 2/89 (2%)

Query  1   MANAGLYRSNRQHIIAGVMGGIAERFGWNANLLRLIFVVVSVMSAAFPGILVYLILWLVI  60
           MAN GLYRSNRQH+IAGVMGGIAERFGWNANLLRLIFV++SVMSAAFPGILVYLILWL++
Sbjct  1   MANTGLYRSNRQHLIAGVMGGIAERFGWNANLLRLIFVIISVMSAAFPGILVYLILWLIM  60

Query  61  PKRPQQLEYQAMKGYEHPVRTVHEDHQRR  89
           PK+ ++L YQ  + Y+ P+RTVHE+ + R
Sbjct  61  PKQTERLPYQ--QSYQQPIRTVHEEQRMR  87


>A0A7T9UKA2 PspC domain-containing protein [Acinetobacter ursingii]
Length=88

 Score = 143 bits (361),  Expect = 2e-50
 Identities = 67/89 (75%), Positives = 80/89 (90%), Gaps = 2/89 (2%)

Query  1   MANAGLYRSNRQHIIAGVMGGIAERFGWNANLLRLIFVVVSVMSAAFPGILVYLILWLVI  60
           MAN GLYRSNRQH+IAGVMGGIAERFGWNANLLRLIFV++SVMSAAFPGILVYLILWL++
Sbjct  1   MANTGLYRSNRQHLIAGVMGGIAERFGWNANLLRLIFVIISVMSAAFPGILVYLILWLIM  60

Query  61  PKRPQQLEYQAMKGYEHPVRTVHEDHQRR  89
           PK+ ++L YQ  + Y+ P+RTVHE+ + R
Sbjct  61  PKQTERLPYQ--QSYQQPIRTVHEEQRMR  87


>A0A3A8EQI7 PspC domain-containing protein [Acinetobacter guerrae]
Length=88

 Score = 141 bits (355),  Expect = 2e-49
 Identities = 65/89 (73%), Positives = 82/89 (92%), Gaps = 2/89 (2%)

Query  1   MANAGLYRSNRQHIIAGVMGGIAERFGWNANLLRLIFVVVSVMSAAFPGILVYLILWLVI  60
           MAN GLYRSNRQ+IIAGVMGGIAERFGWNANLLR+IFV+VSVMSAAFPGILVYL+LWL++
Sbjct  1   MANTGLYRSNRQNIIAGVMGGIAERFGWNANLLRIIFVIVSVMSAAFPGILVYLVLWLIM  60

Query  61  PKRPQQLEYQAMKGYEHPVRTVHEDHQRR  89
           PK+ ++L+Y+  +GY+ P+RTVH++ + R
Sbjct  61  PKKTERLQYE--QGYQQPIRTVHQEDRIR  87


>N9PBF2 Phage shock protein PspC N-terminal domain-containing 
protein [Acinetobacter sp. CIP 101966]
Length=91

 Score = 139 bits (350),  Expect = 1e-48
 Identities = 64/88 (73%), Positives = 80/88 (91%), Gaps = 3/88 (3%)

Query  1   MANAGLYRSNRQHIIAGVMGGIAERFGWNANLLRLIFVVVSVMSAAFPGILVYLILWLVI  60
           MAN GLYRSNR ++IAGVMGGIAERFGWNANLLRLIFVV+S+MSAAFPGILVYL+LWL++
Sbjct  1   MANVGLYRSNRSNMIAGVMGGIAERFGWNANLLRLIFVVISIMSAAFPGILVYLVLWLIM  60

Query  61  PKRPQQLEY---QAMKGYEHPVRTVHED  85
           PK+P ++++   Q  +GY+HPVRTV++D
Sbjct  61  PKKPYRIDHNAAQQAQGYQHPVRTVNQD  88


>A0A7Y8Q137 PspC domain-containing protein [Acinetobacter sp. 
SwsAc6]
Length=86

 Score = 139 bits (349),  Expect = 1e-48
 Identities = 67/85 (79%), Positives = 77/85 (91%), Gaps = 2/85 (2%)

Query  1   MANAGLYRSNRQHIIAGVMGGIAERFGWNANLLRLIFVVVSVMSAAFPGILVYLILWLVI  60
           MAN GLYRSNR ++IAGVMGGIAERFGWNANLLR+IFV+VS MSAAFPGILVYL+LWLVI
Sbjct  1   MANVGLYRSNRSNMIAGVMGGIAERFGWNANLLRVIFVIVSCMSAAFPGILVYLVLWLVI  60

Query  61  PKRPQQLEYQAMKGYEHPVRTVHED  85
           PK  QQ +Y+ M+GY+HPVRTV+ D
Sbjct  61  PK--QQSQYKNMQGYDHPVRTVNND  83


>A0A3A8G426 PspC domain-containing protein [Acinetobacter cumulans]
Length=86

 Score = 139 bits (349),  Expect = 1e-48
 Identities = 67/85 (79%), Positives = 77/85 (91%), Gaps = 2/85 (2%)

Query  1   MANAGLYRSNRQHIIAGVMGGIAERFGWNANLLRLIFVVVSVMSAAFPGILVYLILWLVI  60
           MAN GLYRSNR ++IAGVMGGIAERFGWNANLLR+IFV+VS MSAAFPGILVYL+LWLVI
Sbjct  1   MANVGLYRSNRSNMIAGVMGGIAERFGWNANLLRVIFVIVSCMSAAFPGILVYLVLWLVI  60

Query  61  PKRPQQLEYQAMKGYEHPVRTVHED  85
           PK  QQ +Y+ M+GY+HPVRTV+ D
Sbjct  61  PK--QQSQYKNMQGYDHPVRTVNND  83


>A0A3A8FMZ5 PspC domain-containing protein [Acinetobacter sp. 
WCHAc060007]
Length=86

 Score = 138 bits (348),  Expect = 2e-48
 Identities = 67/85 (79%), Positives = 77/85 (91%), Gaps = 2/85 (2%)

Query  1   MANAGLYRSNRQHIIAGVMGGIAERFGWNANLLRLIFVVVSVMSAAFPGILVYLILWLVI  60
           MAN GLYRSNR ++IAGVMGGIAERFGWNANLLR+IFV+VS MSAAFPGILVYL+LWLVI
Sbjct  1   MANVGLYRSNRSNMIAGVMGGIAERFGWNANLLRVIFVIVSCMSAAFPGILVYLVLWLVI  60

Query  61  PKRPQQLEYQAMKGYEHPVRTVHED  85
           PK  QQ +Y+ M+GY+HPVRTV+ D
Sbjct  61  PK--QQNQYKNMQGYDHPVRTVNND  83


>A0A0F3LNX7 PspC domain-containing protein [Acinetobacter indicus]
Length=88

 Score = 136 bits (342),  Expect = 1e-47
 Identities = 64/85 (75%), Positives = 77/85 (91%), Gaps = 2/85 (2%)

Query  1   MANAGLYRSNRQHIIAGVMGGIAERFGWNANLLRLIFVVVSVMSAAFPGILVYLILWLVI  60
           MAN GLYRSNR ++IAGVMGGIAERFGWNANLLR+IFV+VS+MSAAFPGILVYL+LWLV+
Sbjct  1   MANVGLYRSNRSNMIAGVMGGIAERFGWNANLLRIIFVLVSIMSAAFPGILVYLVLWLVM  60

Query  61  PKRPQQLEYQAMKGYEHPVRTVHED  85
           PK+  ++E+  + GY +PVRTVHED
Sbjct  61  PKKKAEIEH--VNGYRNPVRTVHED  83


>A0A6C0YQJ4 PspC domain-containing protein [Acinetobacter indicus]
Length=88

 Score = 135 bits (341),  Expect = 2e-47
 Identities = 63/85 (74%), Positives = 77/85 (91%), Gaps = 2/85 (2%)

Query  1   MANAGLYRSNRQHIIAGVMGGIAERFGWNANLLRLIFVVVSVMSAAFPGILVYLILWLVI  60
           MAN GLYRSNR ++IAGVMGGIAERFGWNANLLR+IFV+VS+MSAAFPGILVYL+LWLV+
Sbjct  1   MANVGLYRSNRSNMIAGVMGGIAERFGWNANLLRIIFVLVSIMSAAFPGILVYLVLWLVM  60

Query  61  PKRPQQLEYQAMKGYEHPVRTVHED  85
           PK+  ++E+  + GY +PVRT+HED
Sbjct  61  PKKKAEIEH--VNGYRNPVRTIHED  83


>V2VI99 Phage shock protein PspC N-terminal domain-containing 
protein [Acinetobacter indicus CIP 110367]
Length=88

 Score = 135 bits (341),  Expect = 2e-47
 Identities = 63/85 (74%), Positives = 77/85 (91%), Gaps = 2/85 (2%)

Query  1   MANAGLYRSNRQHIIAGVMGGIAERFGWNANLLRLIFVVVSVMSAAFPGILVYLILWLVI  60
           MAN GLYRSNR ++IAGVMGGIAERFGWNANLLR+IFV+VS+MSAAFPGILVYL+LWLV+
Sbjct  1   MANVGLYRSNRSNMIAGVMGGIAERFGWNANLLRIIFVLVSIMSAAFPGILVYLVLWLVM  60

Query  61  PKRPQQLEYQAMKGYEHPVRTVHED  85
           PK+  ++E+  + GY +PVRT+HED
Sbjct  61  PKKKAEIEH--VNGYRNPVRTIHED  83


>N9KSS9 Phage shock protein PspC N-terminal domain-containing 
protein [Acinetobacter sp. CIP 53.82]
Length=88

 Score = 135 bits (341),  Expect = 2e-47
 Identities = 63/85 (74%), Positives = 77/85 (91%), Gaps = 2/85 (2%)

Query  1   MANAGLYRSNRQHIIAGVMGGIAERFGWNANLLRLIFVVVSVMSAAFPGILVYLILWLVI  60
           MAN GLYRSNR ++IAGVMGGIAERFGWNANLLR+IFV+VS+MSAAFPGILVYL+LWLV+
Sbjct  1   MANVGLYRSNRSNMIAGVMGGIAERFGWNANLLRIIFVLVSIMSAAFPGILVYLVLWLVM  60

Query  61  PKRPQQLEYQAMKGYEHPVRTVHED  85
           PK+  ++E+  + GY +PVRT+HED
Sbjct  61  PKKKAEIEH--VNGYRNPVRTIHED  83



Lambda      K        H        a         alpha
   0.334    0.145    0.462    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 75712


  Database: 67a65aaefe2c225958c85eb24e1ac32a.TrEMBL.fasta
    Posted date:  May 20, 2024  10:09 PM
  Number of letters in database: 1,677
  Number of sequences in database:  19



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40