Comparative Genomics

ACIAD0955 / TrEMBL Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: f2afaeeee74178d4a5e059899e7d3d9a.TrEMBL.fasta
           11 sequences; 2,152 total letters



Query= ACIAD0955

Length=201
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q6FDL0 Uncharacterized protein [Acinetobacter baylyi (strain ATCC...  396     9e-147
Q9ZG03 Bacteriophage protein [Acinetobacter baylyi (strain ATCC 3...  363     6e-134
A0A4R2MLR1 Lipoprotein [Uruburuella suis]                             169     5e-57 
V7IE01 Lipoprotein [Eikenella corrodens CC92I]                        154     3e-51 
A0A1A9RS07 Lipoprotein [Eikenella corrodens]                          154     3e-51 
A0A378TXU2 Lipoprotein [Neisseria elongata]                           153     5e-51 
A0A1A9RAV2 Lipoprotein [Eikenella corrodens]                          153     7e-51 
A0A1F0F8G0 Lipoprotein [Eikenella sp. HMSC073A11]                     153     7e-51 
A0A1F1SM66 Lipoprotein [Neisseria sp. HMSC31F04]                      152     9e-51 
A0A0B5CH19 Lipoprotein [Neisseria elongata subsp. glycolytica ATC...  150     5e-50 
A0A3S9SKR8 Lipoprotein [Eikenella corrodens]                          150     6e-50 


>Q6FDL0 Uncharacterized protein [Acinetobacter baylyi (strain 
ATCC 33305 / BD413 / ADP1)]
Length=200

 Score = 396 bits (1017),  Expect = 9e-147
 Identities = 199/200 (99%), Positives = 200/200 (100%), Gaps = 0/200 (0%)

Query  1    VKLRSTLIILLVVPLASCFMAQKSALVKSNVVYDATFQARIRLYGPYGDKLIKHYNDRTC  60
            +KLRSTLIILLVVPLASCFMAQKSALVKSNVVYDATFQARIRLYGPYGDKLIKHYNDRTC
Sbjct  1    MKLRSTLIILLVVPLASCFMAQKSALVKSNVVYDATFQARIRLYGPYGDKLIKHYNDRTC  60

Query  61   KEWRDTAGSVIHHRFNNGAPRKIKNISIGIPATERSLMALNDTGVMFRDSFKEYVIEANK  120
            KEWRDTAGSVIHHRFNNGAPRKIKNISIGIPATERSLMALNDTGVMFRDSFKEYVIEANK
Sbjct  61   KEWRDTAGSVIHHRFNNGAPRKIKNISIGIPATERSLMALNDTGVMFRDSFKEYVIEANK  120

Query  121  PMVLDASSSVVMDSYSKSCRIAVSFIPQAGKDYEAAYIEQNRTCTIRIYEITHQITEKNL  180
            PMVLDASSSVVMDSYSKSCRIAVSFIPQAGKDYEAAYIEQNRTCTIRIYEITHQITEKNL
Sbjct  121  PMVLDASSSVVMDSYSKSCRIAVSFIPQAGKDYEAAYIEQNRTCTIRIYEITHQITEKNL  180

Query  181  VSIQGVDQLENCSRLSDSSI  200
            VSIQGVDQLENCSRLSDSSI
Sbjct  181  VSIQGVDQLENCSRLSDSSI  200


>Q9ZG03 Bacteriophage protein [Acinetobacter baylyi (strain ATCC 
33305 / BD413 / ADP1)]
Length=181

 Score = 363 bits (931),  Expect = 6e-134
 Identities = 181/181 (100%), Positives = 181/181 (100%), Gaps = 0/181 (0%)

Query  20   MAQKSALVKSNVVYDATFQARIRLYGPYGDKLIKHYNDRTCKEWRDTAGSVIHHRFNNGA  79
            MAQKSALVKSNVVYDATFQARIRLYGPYGDKLIKHYNDRTCKEWRDTAGSVIHHRFNNGA
Sbjct  1    MAQKSALVKSNVVYDATFQARIRLYGPYGDKLIKHYNDRTCKEWRDTAGSVIHHRFNNGA  60

Query  80   PRKIKNISIGIPATERSLMALNDTGVMFRDSFKEYVIEANKPMVLDASSSVVMDSYSKSC  139
            PRKIKNISIGIPATERSLMALNDTGVMFRDSFKEYVIEANKPMVLDASSSVVMDSYSKSC
Sbjct  61   PRKIKNISIGIPATERSLMALNDTGVMFRDSFKEYVIEANKPMVLDASSSVVMDSYSKSC  120

Query  140  RIAVSFIPQAGKDYEAAYIEQNRTCTIRIYEITHQITEKNLVSIQGVDQLENCSRLSDSS  199
            RIAVSFIPQAGKDYEAAYIEQNRTCTIRIYEITHQITEKNLVSIQGVDQLENCSRLSDSS
Sbjct  121  RIAVSFIPQAGKDYEAAYIEQNRTCTIRIYEITHQITEKNLVSIQGVDQLENCSRLSDSS  180

Query  200  I  200
            I
Sbjct  181  I  181


>A0A4R2MLR1 Lipoprotein [Uruburuella suis]
Length=199

 Score = 169 bits (427),  Expect = 5e-57
 Identities = 79/168 (47%), Positives = 113/168 (67%), Gaps = 0/168 (0%)

Query  13   VPLASCFMAQKSALVKSNVVYDATFQARIRLYGPYGDKLIKHYNDRTCKEWRDTAGSVIH  72
            V L+ CFMAQKS LV     Y  +  ARIRLYG YG++ I+ Y + +C +W+  A   +H
Sbjct  14   VALSGCFMAQKSTLVHKQEAYQPSSDARIRLYGAYGNQEIRLYRNSSCADWQPQAAQRVH  73

Query  73   HRFNNGAPRKIKNISIGIPATERSLMALNDTGVMFRDSFKEYVIEANKPMVLDASSSVVM  132
             R  NG P++I+N ++G+P T RS+ A  D GV+FRDS++E+VI A KP+VLD S S   
Sbjct  74   TRMVNGLPKRIRNYTVGMPDTVRSVAANQDKGVVFRDSYQEFVISAGKPLVLDGSKSATT  133

Query  133  DSYSKSCRIAVSFIPQAGKDYEAAYIEQNRTCTIRIYEITHQITEKNL  180
            DS  +SCR  VSF+P+AGKDYEAA+    + C + ++EI  ++ +KN+
Sbjct  134  DSRHQSCRTGVSFVPRAGKDYEAAFRWLEKGCVVDVFEIGAKVDDKNV  181


>V7IE01 Lipoprotein [Eikenella corrodens CC92I]
Length=198

 Score = 154 bits (389),  Expect = 3e-51
 Identities = 75/173 (43%), Positives = 107/173 (62%), Gaps = 0/173 (0%)

Query  2    KLRSTLIILLVVPLASCFMAQKSALVKSNVVYDATFQARIRLYGPYGDKLIKHYNDRTCK  61
            K+   L I   + L+ CFM+QKS +V  +V Y+A  QAR+R+YG YG  +++   + TC+
Sbjct  3    KISVLLPICAALALSGCFMSQKSQIVHRDVPYNAQNQARLRIYGQYGRDVVRMIPNSTCE  62

Query  62   EWRDTAGSVIHHRFNNGAPRKIKNISIGIPATERSLMALNDTGVMFRDSFKEYVIEANKP  121
            +W +  G   H RF  G PR+I+N+S+G+PAT+RS     DTGV+FR+S+KE+V+ A K 
Sbjct  63   QWAEKQGRRRHTRFTGGLPRRIRNLSVGMPATQRSNTVNADTGVVFRESYKEFVVPAGKA  122

Query  122  MVLDASSSVVMDSYSKSCRIAVSFIPQAGKDYEAAYIEQNRTCTIRIYEITHQ  174
            +VLD + S    S    CR+A S  PQAGKDYE  Y      C + + EI  Q
Sbjct  123  LVLDGAFSTETTSQVNRCRLAASLTPQAGKDYEVQYSRGGNGCDVAVVEILPQ  175


>A0A1A9RS07 Lipoprotein [Eikenella corrodens]
Length=198

 Score = 154 bits (389),  Expect = 3e-51
 Identities = 75/173 (43%), Positives = 107/173 (62%), Gaps = 0/173 (0%)

Query  2    KLRSTLIILLVVPLASCFMAQKSALVKSNVVYDATFQARIRLYGPYGDKLIKHYNDRTCK  61
            K+   L I   + L+ CFM+QKS +V  +V Y+A  QAR+R+YG YG  +++   + TC+
Sbjct  3    KISLLLPICAALALSGCFMSQKSQIVHRDVPYNAQNQARLRIYGQYGRDVVRMIPNSTCE  62

Query  62   EWRDTAGSVIHHRFNNGAPRKIKNISIGIPATERSLMALNDTGVMFRDSFKEYVIEANKP  121
            +W +  G   H RF  G PR+I+N+S+G+PAT+RS     DTGV+FR+S+KE+V+ A K 
Sbjct  63   QWAEKQGRRRHTRFTGGLPRRIRNLSVGMPATQRSNTVNADTGVVFRESYKEFVVPAGKA  122

Query  122  MVLDASSSVVMDSYSKSCRIAVSFIPQAGKDYEAAYIEQNRTCTIRIYEITHQ  174
            +VLD + S    S    CR+A S  PQAGKDYE  Y      C + + EI  Q
Sbjct  123  LVLDGAFSTETTSQVNRCRLAASLTPQAGKDYEVQYSRGGNGCDVAVVEILPQ  175


>A0A378TXU2 Lipoprotein [Neisseria elongata]
Length=194

 Score = 153 bits (387),  Expect = 5e-51
 Identities = 75/172 (44%), Positives = 110/172 (64%), Gaps = 1/172 (1%)

Query  3    LRSTLIILLVVPLASCFMAQKSALVKSNVVYDATFQARIRLYGPYGDKLIKHYNDRTCKE  62
            ++S L++  ++ L++C   Q S +VK NV +D   QA+IR YG YG  LI+ Y +  C +
Sbjct  1    MKSVLLLGSILLLSACGSMQ-SQVVKKNVAFDPGSQAQIRSYGSYGSDLIRIYPETDCAK  59

Query  63   WRDTAGSVIHHRFNNGAPRKIKNISIGIPATERSLMALNDTGVMFRDSFKEYVIEANKPM  122
            W  T  + ++ RF NG PRK++NISIGIP TE S     DTG +FRDS++E V+ A++P+
Sbjct  60   WEGTKRNAVNRRFVNGLPRKVRNISIGIPPTELSRKTEKDTGFVFRDSYREMVVSADQPV  119

Query  123  VLDASSSVVMDSYSKSCRIAVSFIPQAGKDYEAAYIEQNRTCTIRIYEITHQ  174
            VLD + S    +Y  SCR+A SF P+AG+ YE  Y+ +   C I +Y I H+
Sbjct  120  VLDGAFSSQTRNYHYSCRVAASFTPKAGEAYEVRYLSEEDGCDIEVYHIGHE  171


>A0A1A9RAV2 Lipoprotein [Eikenella corrodens]
Length=198

 Score = 153 bits (386),  Expect = 7e-51
 Identities = 75/173 (43%), Positives = 106/173 (61%), Gaps = 0/173 (0%)

Query  2    KLRSTLIILLVVPLASCFMAQKSALVKSNVVYDATFQARIRLYGPYGDKLIKHYNDRTCK  61
            K+   L I   + L+ CFM+QKS +V   V Y+A  QAR+R+YG YG  +++   + TC+
Sbjct  3    KISLLLPICAALALSGCFMSQKSQIVHREVPYNAQNQARLRIYGQYGRDVVRMIPNSTCE  62

Query  62   EWRDTAGSVIHHRFNNGAPRKIKNISIGIPATERSLMALNDTGVMFRDSFKEYVIEANKP  121
            +W +  G   H RF  G PR+I+N+S+G+PAT+RS     DTGV+FR+S+KE+V+ A K 
Sbjct  63   QWAEKQGRRRHTRFTGGLPRRIRNLSVGMPATQRSNTVNADTGVVFRESYKEFVVPAGKA  122

Query  122  MVLDASSSVVMDSYSKSCRIAVSFIPQAGKDYEAAYIEQNRTCTIRIYEITHQ  174
            +VLD + S    S    CR+A S  PQAGKDYE  Y      C + + EI  Q
Sbjct  123  LVLDGAFSSETTSQVNRCRLAASLTPQAGKDYEVQYSRGGNGCDVAVVEILPQ  175


>A0A1F0F8G0 Lipoprotein [Eikenella sp. HMSC073A11]
Length=198

 Score = 153 bits (386),  Expect = 7e-51
 Identities = 75/173 (43%), Positives = 106/173 (61%), Gaps = 0/173 (0%)

Query  2    KLRSTLIILLVVPLASCFMAQKSALVKSNVVYDATFQARIRLYGPYGDKLIKHYNDRTCK  61
            K+   L I   + L+ CFM+QKS +V   V Y+A  QAR+R+YG YG  +++   + TC+
Sbjct  3    KISLLLPICAALALSGCFMSQKSQIVHREVPYNAQNQARLRIYGQYGRDVVRMIPNSTCE  62

Query  62   EWRDTAGSVIHHRFNNGAPRKIKNISIGIPATERSLMALNDTGVMFRDSFKEYVIEANKP  121
            +W +  G   H RF  G PR+I+N+S+G+PAT+RS     DTGV+FR+S+KE+V+ A K 
Sbjct  63   QWAEKQGRRRHTRFTGGLPRRIRNLSVGMPATQRSNTVNADTGVVFRESYKEFVVPAGKA  122

Query  122  MVLDASSSVVMDSYSKSCRIAVSFIPQAGKDYEAAYIEQNRTCTIRIYEITHQ  174
            +VLD + S    S    CR+A S  PQAGKDYE  Y      C + + EI  Q
Sbjct  123  LVLDGAFSSETTSQVNRCRLAASLTPQAGKDYEVQYSRGGNGCDVAVVEILPQ  175


>A0A1F1SM66 Lipoprotein [Neisseria sp. HMSC31F04]
Length=194

 Score = 152 bits (385),  Expect = 9e-51
 Identities = 74/172 (43%), Positives = 109/172 (63%), Gaps = 1/172 (1%)

Query  3    LRSTLIILLVVPLASCFMAQKSALVKSNVVYDATFQARIRLYGPYGDKLIKHYNDRTCKE  62
            ++S L++  ++ L++C   Q S +VK NV +D   QA++R YG YG  LI+ Y +  C +
Sbjct  1    MKSVLLLGSILLLSACGSMQ-SQVVKKNVAFDPGSQAQVRSYGSYGSDLIRIYPETDCAK  59

Query  63   WRDTAGSVIHHRFNNGAPRKIKNISIGIPATERSLMALNDTGVMFRDSFKEYVIEANKPM  122
            W  T  + ++ RF NG PRK++NISIGIP TE S     DTG +FRDS++E V+ AN+P+
Sbjct  60   WEGTKRNAVNRRFVNGLPRKVRNISIGIPPTELSRKTEKDTGFVFRDSYREMVVSANQPV  119

Query  123  VLDASSSVVMDSYSKSCRIAVSFIPQAGKDYEAAYIEQNRTCTIRIYEITHQ  174
            VLD + S    +   SCR+A SF P+AG+ YE  Y+ +   C I +Y I H+
Sbjct  120  VLDGAFSSQTRNQHYSCRVAASFTPKAGEAYEVRYLSEEEGCDIEVYHIGHE  171


>A0A0B5CH19 Lipoprotein [Neisseria elongata subsp. glycolytica 
ATCC 29315]
Length=194

 Score = 150 bits (380),  Expect = 5e-50
 Identities = 75/172 (44%), Positives = 107/172 (62%), Gaps = 1/172 (1%)

Query  3    LRSTLIILLVVPLASCFMAQKSALVKSNVVYDATFQARIRLYGPYGDKLIKHYNDRTCKE  62
            ++S ++   V+ L++C   Q S +VK NV +D   QA+IR YG YG  LI+ Y    C +
Sbjct  1    MKSVVLFGSVLLLSACGSMQ-SQVVKKNVAFDPDSQAQIRSYGSYGSDLIRIYPKTDCAK  59

Query  63   WRDTAGSVIHHRFNNGAPRKIKNISIGIPATERSLMALNDTGVMFRDSFKEYVIEANKPM  122
            W  T  + ++ RF NG PRK++NISIGIP TE S     DTG +FRDS++E V+ AN+P+
Sbjct  60   WEGTKRNAVNRRFVNGLPRKVRNISIGIPPTELSRKTEKDTGFVFRDSYREMVVSANQPV  119

Query  123  VLDASSSVVMDSYSKSCRIAVSFIPQAGKDYEAAYIEQNRTCTIRIYEITHQ  174
            VLD + S    +   SCR+A SF P+AG+ YE  Y+ +   C I +Y I H+
Sbjct  120  VLDGAFSSQTRNQHYSCRVAASFTPKAGEAYEVRYLSEEEGCDIEVYHIGHE  171


>A0A3S9SKR8 Lipoprotein [Eikenella corrodens]
Length=198

 Score = 150 bits (380),  Expect = 6e-50
 Identities = 73/170 (43%), Positives = 105/170 (62%), Gaps = 0/170 (0%)

Query  2    KLRSTLIILLVVPLASCFMAQKSALVKSNVVYDATFQARIRLYGPYGDKLIKHYNDRTCK  61
            K+   L I   + L+ CFM+QKS +V  +V Y+A  QAR+R+YG YG  +++   + TC+
Sbjct  3    KISVLLPICAALALSGCFMSQKSQIVHRDVPYNAQNQARLRIYGQYGRDVVRMIPNSTCE  62

Query  62   EWRDTAGSVIHHRFNNGAPRKIKNISIGIPATERSLMALNDTGVMFRDSFKEYVIEANKP  121
            +W +  G   H RF  G P +I+N+S+G+PAT+RS     DTGV+FR+S+KE+V+ A K 
Sbjct  63   QWAEKQGRRRHTRFTGGLPHRIRNLSVGMPATQRSNTVNADTGVVFRESYKEFVVPAGKA  122

Query  122  MVLDASSSVVMDSYSKSCRIAVSFIPQAGKDYEAAYIEQNRTCTIRIYEI  171
            +VLD + S    S    CR+A S  PQAGKDYE  Y      C + + EI
Sbjct  123  LVLDGAFSSETTSQVNRCRLAASLTPQAGKDYEVQYSRGGNGCDVAVVEI  172



Lambda      K        H        a         alpha
   0.323    0.135    0.392    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 289740


  Database: f2afaeeee74178d4a5e059899e7d3d9a.TrEMBL.fasta
    Posted date:  Jun 3, 2024  11:19 AM
  Number of letters in database: 2,152
  Number of sequences in database:  11



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40