Comparative Genomics

ACIAD1384 / TrEMBL Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: e8db532f559f9b555f8f174e9e9507df.TrEMBL.fasta
           12 sequences; 1,885 total letters



Query= ACIAD1384

Length=160
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

A0A7G2SC44 Regulatory protein RecX [Acinetobacter sp]                 308     2e-113
N9BTN4 Regulatory protein RecX [Acinetobacter soli NIPH 2899]         228     1e-81 
A0A427LU39 Regulatory protein RecX [Acinetobacter soli]               226     6e-81 
A0A3A8EKJ9 Regulatory protein RecX [Acinetobacter guerrae]            226     9e-81 
N9D8R5 Regulatory protein RecX [Acinetobacter ursingii ANC 3649]      225     2e-80 
A0A3R9BNA6 Regulatory protein RecX [Acinetobacter sp. FDAARGOS_515]   225     2e-80 
A0A009YR72 Regulatory protein RecX [Acinetobacter sp. 479375]         225     2e-80 
A0A7T9UL56 Regulatory protein RecX [Acinetobacter ursingii]           225     2e-80 
A0A0M1I0X9 Regulatory protein RecX [Acinetobacter sp. C15]            224     3e-80 
A0A1P8EHU0 Regulatory protein RecX [Acinetobacter soli]               223     7e-80 
A0A3D2SN60 Regulatory protein RecX [Acinetobacter ursingii]           222     2e-79 
H9BMJ5 Regulatory protein RecX [Pseudomonas fluorescens]              50.1    2e-12 


>A0A7G2SC44 Regulatory protein RecX [Acinetobacter sp]
Length=159

 Score = 308 bits (789),  Expect = 2e-113
 Identities = 159/159 (100%), Positives = 159/159 (100%), Gaps = 0/159 (0%)

Query  1    MIFKHTQTSRAELSGTKLRSLAFALLTRKEYSKSELIEKLKLYAVDENEVIQLVDELSDQ  60
            MIFKHTQTSRAELSGTKLRSLAFALLTRKEYSKSELIEKLKLYAVDENEVIQLVDELSDQ
Sbjct  1    MIFKHTQTSRAELSGTKLRSLAFALLTRKEYSKSELIEKLKLYAVDENEVIQLVDELSDQ  60

Query  61   HYQSDQRVAELVLSSQLRKGKGPNRIKQALKNKELDTALINDEIQDIDWLEQAYQLKVKK  120
            HYQSDQRVAELVLSSQLRKGKGPNRIKQALKNKELDTALINDEIQDIDWLEQAYQLKVKK
Sbjct  61   HYQSDQRVAELVLSSQLRKGKGPNRIKQALKNKELDTALINDEIQDIDWLEQAYQLKVKK  120

Query  121  FGTDVETDAKLKAKQIRFLQYRGFDMDIIMKAIHRIEEE  159
            FGTDVETDAKLKAKQIRFLQYRGFDMDIIMKAIHRIEEE
Sbjct  121  FGTDVETDAKLKAKQIRFLQYRGFDMDIIMKAIHRIEEE  159


>N9BTN4 Regulatory protein RecX [Acinetobacter soli NIPH 2899]
Length=159

 Score = 228 bits (581),  Expect = 1e-81
 Identities = 117/158 (74%), Positives = 133/158 (84%), Gaps = 0/158 (0%)

Query  1    MIFKHTQTSRAELSGTKLRSLAFALLTRKEYSKSELIEKLKLYAVDENEVIQLVDELSDQ  60
            M F+  +T+   L+GT+LRSLAFALLTRKEYSK+ELIEKL LYA+D+ EVIQLV+ELSDQ
Sbjct  1    MYFQKKKTNNPTLTGTRLRSLAFALLTRKEYSKAELIEKLNLYALDQAEVIQLVEELSDQ  60

Query  61   HYQSDQRVAELVLSSQLRKGKGPNRIKQALKNKELDTALINDEIQDIDWLEQAYQLKVKK  120
            +YQSDQRVAE+VL+SQ+RKGKGPN+IK ALK K LD  LINDE  DIDW EQAYQLK KK
Sbjct  61   NYQSDQRVAEMVLASQMRKGKGPNQIKHALKKKALDRELINDEFNDIDWFEQAYQLKRKK  120

Query  121  FGTDVETDAKLKAKQIRFLQYRGFDMDIIMKAIHRIEE  158
            FG  VE D K KAKQIRFLQYRGFDMDII+KAI+   E
Sbjct  121  FGDTVEKDPKQKAKQIRFLQYRGFDMDIILKAINYTAE  158


>A0A427LU39 Regulatory protein RecX [Acinetobacter soli]
Length=159

 Score = 226 bits (576),  Expect = 6e-81
 Identities = 116/159 (73%), Positives = 132/159 (83%), Gaps = 0/159 (0%)

Query  1    MIFKHTQTSRAELSGTKLRSLAFALLTRKEYSKSELIEKLKLYAVDENEVIQLVDELSDQ  60
            M F+  +     L+GT+LRSLAFALLTRKEYSK+ELIEKL LYA+D+ EVIQLV+ELSDQ
Sbjct  1    MYFQKKKPDNPTLTGTRLRSLAFALLTRKEYSKAELIEKLNLYALDQAEVIQLVEELSDQ  60

Query  61   HYQSDQRVAELVLSSQLRKGKGPNRIKQALKNKELDTALINDEIQDIDWLEQAYQLKVKK  120
            +YQSDQRVAE+VL+SQ+RKGKGPN+IK ALK K LD  LINDE  DIDW EQAYQLK KK
Sbjct  61   NYQSDQRVAEMVLASQMRKGKGPNQIKHALKKKALDRELINDEFNDIDWFEQAYQLKRKK  120

Query  121  FGTDVETDAKLKAKQIRFLQYRGFDMDIIMKAIHRIEEE  159
            FG  VE D K KAKQIRFLQYRGFDMDII+KAI+   E+
Sbjct  121  FGDTVEKDPKQKAKQIRFLQYRGFDMDIILKAINYTAED  159


>A0A3A8EKJ9 Regulatory protein RecX [Acinetobacter guerrae]
Length=161

 Score = 226 bits (575),  Expect = 9e-81
 Identities = 111/153 (73%), Positives = 135/153 (88%), Gaps = 0/153 (0%)

Query  7    QTSRAELSGTKLRSLAFALLTRKEYSKSELIEKLKLYAVDENEVIQLVDELSDQHYQSDQ  66
            Q ++A+L+G +LRS AFALLTRKEY+K+ELIEKL LYA D NEV+ LV+ELS++ YQSDQ
Sbjct  8    QPNKAKLTGARLRSYAFALLTRKEYAKAELIEKLSLYAQDHNEVLALVEELSERQYQSDQ  67

Query  67   RVAELVLSSQLRKGKGPNRIKQALKNKELDTALINDEIQDIDWLEQAYQLKVKKFGTDVE  126
            RVAE++LSSQ+RKGKGPNRIKQALK+K++D+ LI ++IQ++DW EQAYQLKVKKFG DVE
Sbjct  68   RVAEMILSSQIRKGKGPNRIKQALKHKQVDSHLILEDIQEVDWFEQAYQLKVKKFGNDVE  127

Query  127  TDAKLKAKQIRFLQYRGFDMDIIMKAIHRIEEE  159
             D K KAKQIRFLQYRGFDM++IMKAI R  EE
Sbjct  128  KDPKQKAKQIRFLQYRGFDMNVIMKAISRTTEE  160


>N9D8R5 Regulatory protein RecX [Acinetobacter ursingii ANC 3649]
Length=161

 Score = 225 bits (573),  Expect = 2e-80
 Identities = 112/153 (73%), Positives = 134/153 (88%), Gaps = 0/153 (0%)

Query  7    QTSRAELSGTKLRSLAFALLTRKEYSKSELIEKLKLYAVDENEVIQLVDELSDQHYQSDQ  66
            Q ++  L+GT+LRS AFALLTRKEY+K+ELIEKL LYA D +EV+ LV+ELS++ YQSDQ
Sbjct  8    QANKPLLTGTRLRSYAFALLTRKEYAKAELIEKLSLYAQDRDEVLALVEELSERQYQSDQ  67

Query  67   RVAELVLSSQLRKGKGPNRIKQALKNKELDTALINDEIQDIDWLEQAYQLKVKKFGTDVE  126
            RVAE+VLSSQ+RKGKGPNRIKQALK+K+LD+ LI ++IQD+DW EQAYQLKVKKFGT +E
Sbjct  68   RVAEMVLSSQIRKGKGPNRIKQALKHKQLDSNLILEDIQDVDWFEQAYQLKVKKFGTQIE  127

Query  127  TDAKLKAKQIRFLQYRGFDMDIIMKAIHRIEEE  159
             D K KAKQIRFLQYRGFDM++IMKAI R  EE
Sbjct  128  KDPKQKAKQIRFLQYRGFDMNVIMKAISRTTEE  160


>A0A3R9BNA6 Regulatory protein RecX [Acinetobacter sp. FDAARGOS_515]
Length=161

 Score = 225 bits (573),  Expect = 2e-80
 Identities = 112/153 (73%), Positives = 134/153 (88%), Gaps = 0/153 (0%)

Query  7    QTSRAELSGTKLRSLAFALLTRKEYSKSELIEKLKLYAVDENEVIQLVDELSDQHYQSDQ  66
            Q ++  L+GT+LRS AFALLTRKEY+K+ELIEKL LYA D +EV+ LV+ELS++ YQSDQ
Sbjct  8    QANKPLLTGTRLRSYAFALLTRKEYAKAELIEKLSLYAQDRDEVLALVEELSERQYQSDQ  67

Query  67   RVAELVLSSQLRKGKGPNRIKQALKNKELDTALINDEIQDIDWLEQAYQLKVKKFGTDVE  126
            RVAE+VLSSQ+RKGKGPNRIKQALK+K+LD+ LI ++IQD+DW EQAYQLKVKKFGT +E
Sbjct  68   RVAEMVLSSQIRKGKGPNRIKQALKHKQLDSNLILEDIQDVDWFEQAYQLKVKKFGTQIE  127

Query  127  TDAKLKAKQIRFLQYRGFDMDIIMKAIHRIEEE  159
             D K KAKQIRFLQYRGFDM++IMKAI R  EE
Sbjct  128  KDPKQKAKQIRFLQYRGFDMNVIMKAISRTTEE  160


>A0A009YR72 Regulatory protein RecX [Acinetobacter sp. 479375]
Length=161

 Score = 225 bits (573),  Expect = 2e-80
 Identities = 112/153 (73%), Positives = 134/153 (88%), Gaps = 0/153 (0%)

Query  7    QTSRAELSGTKLRSLAFALLTRKEYSKSELIEKLKLYAVDENEVIQLVDELSDQHYQSDQ  66
            Q ++  L+GT+LRS AFALLTRKEY+K+ELIEKL LYA D +EV+ LV+ELS++ YQSDQ
Sbjct  8    QANKPLLTGTRLRSYAFALLTRKEYAKAELIEKLSLYAQDRDEVLALVEELSERQYQSDQ  67

Query  67   RVAELVLSSQLRKGKGPNRIKQALKNKELDTALINDEIQDIDWLEQAYQLKVKKFGTDVE  126
            RVAE+VLSSQ+RKGKGPNRIKQALK+K+LD+ LI ++IQD+DW EQAYQLKVKKFGT +E
Sbjct  68   RVAEMVLSSQIRKGKGPNRIKQALKHKQLDSNLILEDIQDVDWFEQAYQLKVKKFGTQIE  127

Query  127  TDAKLKAKQIRFLQYRGFDMDIIMKAIHRIEEE  159
             D K KAKQIRFLQYRGFDM++IMKAI R  EE
Sbjct  128  KDPKQKAKQIRFLQYRGFDMNVIMKAISRTTEE  160


>A0A7T9UL56 Regulatory protein RecX [Acinetobacter ursingii]
Length=162

 Score = 225 bits (573),  Expect = 2e-80
 Identities = 112/153 (73%), Positives = 134/153 (88%), Gaps = 0/153 (0%)

Query  7    QTSRAELSGTKLRSLAFALLTRKEYSKSELIEKLKLYAVDENEVIQLVDELSDQHYQSDQ  66
            Q ++  L+GT+LRS AFALLTRKEY+K+ELIEKL LYA D +EV+ LV+ELS++ YQSDQ
Sbjct  9    QANKPLLTGTRLRSYAFALLTRKEYAKAELIEKLSLYAQDRDEVLALVEELSERQYQSDQ  68

Query  67   RVAELVLSSQLRKGKGPNRIKQALKNKELDTALINDEIQDIDWLEQAYQLKVKKFGTDVE  126
            RVAE+VLSSQ+RKGKGPNRIKQALK+K+LD+ LI ++IQD+DW EQAYQLKVKKFGT +E
Sbjct  69   RVAEMVLSSQIRKGKGPNRIKQALKHKQLDSNLILEDIQDVDWFEQAYQLKVKKFGTQIE  128

Query  127  TDAKLKAKQIRFLQYRGFDMDIIMKAIHRIEEE  159
             D K KAKQIRFLQYRGFDM++IMKAI R  EE
Sbjct  129  KDPKQKAKQIRFLQYRGFDMNVIMKAISRTTEE  161


>A0A0M1I0X9 Regulatory protein RecX [Acinetobacter sp. C15]
Length=159

 Score = 224 bits (571),  Expect = 3e-80
 Identities = 115/159 (72%), Positives = 132/159 (83%), Gaps = 0/159 (0%)

Query  1    MIFKHTQTSRAELSGTKLRSLAFALLTRKEYSKSELIEKLKLYAVDENEVIQLVDELSDQ  60
            M F+  +     L+GT+LRSLAFALLTRKEYSK+ELIEKL LYA+D+ EVIQLV+ELSDQ
Sbjct  1    MYFQKKKPDNPTLTGTRLRSLAFALLTRKEYSKAELIEKLNLYALDQAEVIQLVEELSDQ  60

Query  61   HYQSDQRVAELVLSSQLRKGKGPNRIKQALKNKELDTALINDEIQDIDWLEQAYQLKVKK  120
            +YQSDQRVAE+VL+SQ+RKGKGPN+IK ALK K LD  LI+DE  DIDW EQAYQLK KK
Sbjct  61   NYQSDQRVAEMVLASQMRKGKGPNQIKHALKKKALDRELIDDEFNDIDWFEQAYQLKRKK  120

Query  121  FGTDVETDAKLKAKQIRFLQYRGFDMDIIMKAIHRIEEE  159
            FG  VE D K KAKQIRFLQYRGFDMDII+KAI+   E+
Sbjct  121  FGDTVEKDPKQKAKQIRFLQYRGFDMDIILKAINYTAED  159


>A0A1P8EHU0 Regulatory protein RecX [Acinetobacter soli]
Length=159

 Score = 223 bits (569),  Expect = 7e-80
 Identities = 115/158 (73%), Positives = 131/158 (83%), Gaps = 0/158 (0%)

Query  1    MIFKHTQTSRAELSGTKLRSLAFALLTRKEYSKSELIEKLKLYAVDENEVIQLVDELSDQ  60
            M F+  +     L+GT+LRSLAFALLTRKEYSK+ELIEKL LYA+D+ EVIQLV+ELSDQ
Sbjct  1    MYFQKKKPDNPTLTGTRLRSLAFALLTRKEYSKAELIEKLNLYALDQAEVIQLVEELSDQ  60

Query  61   HYQSDQRVAELVLSSQLRKGKGPNRIKQALKNKELDTALINDEIQDIDWLEQAYQLKVKK  120
            +YQSDQRVAE+VL+SQ+RKGKGPN+IK ALK K LD  LI+DE  DIDW EQAYQLK KK
Sbjct  61   NYQSDQRVAEMVLASQMRKGKGPNQIKHALKKKALDRELIDDEFNDIDWFEQAYQLKRKK  120

Query  121  FGTDVETDAKLKAKQIRFLQYRGFDMDIIMKAIHRIEE  158
            FG  VE D K KAKQIRFLQYRGFDMDII+KAI+   E
Sbjct  121  FGDTVEKDPKQKAKQIRFLQYRGFDMDIILKAINYTAE  158


>A0A3D2SN60 Regulatory protein RecX [Acinetobacter ursingii]
Length=161

 Score = 222 bits (566),  Expect = 2e-79
 Identities = 112/153 (73%), Positives = 132/153 (86%), Gaps = 0/153 (0%)

Query  7    QTSRAELSGTKLRSLAFALLTRKEYSKSELIEKLKLYAVDENEVIQLVDELSDQHYQSDQ  66
            Q ++  L+GT+LRS AFALLTRKEY+K ELIEKL LYA D +EV+ LV+ELS++ YQSDQ
Sbjct  8    QANKPLLTGTRLRSYAFALLTRKEYAKVELIEKLSLYAQDRDEVLALVEELSERQYQSDQ  67

Query  67   RVAELVLSSQLRKGKGPNRIKQALKNKELDTALINDEIQDIDWLEQAYQLKVKKFGTDVE  126
            RVAE+VLSSQ+RKGKGPNRIKQALK K+LD+ LI ++IQD+DW EQAYQLKVKKFGT +E
Sbjct  68   RVAEMVLSSQIRKGKGPNRIKQALKLKQLDSNLILEDIQDVDWFEQAYQLKVKKFGTQIE  127

Query  127  TDAKLKAKQIRFLQYRGFDMDIIMKAIHRIEEE  159
             D K KAKQIRFLQYRGFDM++IMKAI R  EE
Sbjct  128  KDPKQKAKQIRFLQYRGFDMNVIMKAISRTTEE  160


>H9BMJ5 Regulatory protein RecX [Pseudomonas fluorescens]
Length=123

 Score = 50.1 bits (118),  Expect = 2e-12
 Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 2/106 (2%)

Query  18   LRSLAFALLTRKEYSKSELIEKLKLYAVDENEVIQLVDELSDQHYQSDQRVAELVLSSQL  77
            +R  A  LL R+E+ + EL  KL+        +   +D L+++   S+ R  E  +S + 
Sbjct  12   VRRTAMDLLARREHGRVELTRKLRQRGAPPEMIETALDRLTEEGLLSEARYLESFVSYRA  71

Query  78   RKGKGPNRIKQALKNKELDTALINDEIQD--IDWLEQAYQLKVKKF  121
            R G GP RI++ L  + L  A I   +++  I+W EQ      +KF
Sbjct  72   RSGYGPLRIREELSQRGLQRADIELALRESGINWQEQLTDTWQRKF  117



Lambda      K        H        a         alpha
   0.320    0.135    0.363    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 189103


  Database: e8db532f559f9b555f8f174e9e9507df.TrEMBL.fasta
    Posted date:  May 20, 2024  8:03 PM
  Number of letters in database: 1,885
  Number of sequences in database:  12



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40