Comparative Genomics

ACIAD2046 / TrEMBL Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 3a041e1409e8c708ac6fcdb77bdb5973.TrEMBL.fasta
           19 sequences; 1,309 total letters



Query= ACIAD2046

Length=71
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

A0A7G2S9Y5 AraC family transcriptional regulator [Acinetobacter sp]   144     2e-51
A8ARU8 Uncharacterized protein [Acinetobacter baylyi (strain ATCC...  144     2e-51
N9BU42 Uncharacterized protein [Acinetobacter soli NIPH 2899]         102     5e-35
A0A3R8ZUV2 Uncharacterized protein [Acinetobacter soli]               102     5e-35
A0A1P8EHD2 Uncharacterized protein [Acinetobacter soli]               100     3e-34
A0A0M1HV49 Uncharacterized protein [Acinetobacter sp. C15]            100     3e-34
A0A3A8F486 Uncharacterized protein [Acinetobacter guerrae]            83.2    3e-27
N9D9Q7 Uncharacterized protein [Acinetobacter ursingii ANC 3649]      82.4    7e-27
A0A3R9DAV4 Uncharacterized protein [Acinetobacter sp. FDAARGOS_515]   82.4    7e-27
A0A009YU42 Uncharacterized protein [Acinetobacter sp. 479375]         82.0    1e-26
A0A2N6VDD1 AraC family transcriptional regulator [Acinetobacter u...  82.0    1e-26
A0A365PMD5 Uncharacterized protein [Acinetobacter junii]              80.1    6e-26
D0SJ51 Uncharacterized protein [Acinetobacter junii SH205]            80.1    6e-26
N8YJC5 Uncharacterized protein [Acinetobacter venetianus (strain ...  79.0    2e-25
A0A137YMG3 Uncharacterized protein [Acinetobacter venetianus]         79.0    2e-25
A0A8I0V9V6 Uncharacterized protein [Acinetobacter sp. SK-43]          78.6    2e-25
A0A2R4UQ06 Uncharacterized protein [Acinetobacter junii]              78.6    2e-25
A0A150HW77 Uncharacterized protein [Acinetobacter venetianus]         78.6    2e-25
A7FBB4 Uncharacterized protein [Acinetobacter baumannii (strain A...  67.4    6e-21


>A0A7G2S9Y5 AraC family transcriptional regulator [Acinetobacter 
sp]
Length=70

 Score = 144 bits (363),  Expect = 2e-51
 Identities = 70/70 (100%), Positives = 70/70 (100%), Gaps = 0/70 (0%)

Query  1   MKALSDLNHHIVQEDFAQTILSLLKHQDIFDSFHYDTSTGQLRVCHALGEDLIREGMYLT  60
           MKALSDLNHHIVQEDFAQTILSLLKHQDIFDSFHYDTSTGQLRVCHALGEDLIREGMYLT
Sbjct  1   MKALSDLNHHIVQEDFAQTILSLLKHQDIFDSFHYDTSTGQLRVCHALGEDLIREGMYLT  60

Query  61  AKYGNLVTSI  70
           AKYGNLVTSI
Sbjct  61  AKYGNLVTSI  70


>A8ARU8 Uncharacterized protein [Acinetobacter baylyi (strain 
ATCC 33305 / BD413 / ADP1)]
Length=70

 Score = 144 bits (363),  Expect = 2e-51
 Identities = 70/70 (100%), Positives = 70/70 (100%), Gaps = 0/70 (0%)

Query  1   MKALSDLNHHIVQEDFAQTILSLLKHQDIFDSFHYDTSTGQLRVCHALGEDLIREGMYLT  60
           MKALSDLNHHIVQEDFAQTILSLLKHQDIFDSFHYDTSTGQLRVCHALGEDLIREGMYLT
Sbjct  1   MKALSDLNHHIVQEDFAQTILSLLKHQDIFDSFHYDTSTGQLRVCHALGEDLIREGMYLT  60

Query  61  AKYGNLVTSI  70
           AKYGNLVTSI
Sbjct  61  AKYGNLVTSI  70


>N9BU42 Uncharacterized protein [Acinetobacter soli NIPH 2899]
Length=66

 Score = 102 bits (255),  Expect = 5e-35
 Identities = 47/61 (77%), Positives = 53/61 (87%), Gaps = 0/61 (0%)

Query  10  HIVQEDFAQTILSLLKHQDIFDSFHYDTSTGQLRVCHALGEDLIREGMYLTAKYGNLVTS  69
           H+V +D ++TI+ L  H DIFDS HYDT+T QLRVCHALGEDLIREGMYLTAKYGNLVTS
Sbjct  6   HVVTQDLSETIIWLFHHPDIFDSLHYDTATNQLRVCHALGEDLIREGMYLTAKYGNLVTS  65

Query  70  I  70
           I
Sbjct  66  I  66


>A0A3R8ZUV2 Uncharacterized protein [Acinetobacter soli]
Length=66

 Score = 102 bits (255),  Expect = 5e-35
 Identities = 47/61 (77%), Positives = 53/61 (87%), Gaps = 0/61 (0%)

Query  10  HIVQEDFAQTILSLLKHQDIFDSFHYDTSTGQLRVCHALGEDLIREGMYLTAKYGNLVTS  69
           H+V +D ++TI+ L  H DIFDS HYDT+T QLRVCHALGEDLIREGMYLTAKYGNLVTS
Sbjct  6   HVVTQDLSETIIWLFHHPDIFDSLHYDTATNQLRVCHALGEDLIREGMYLTAKYGNLVTS  65

Query  70  I  70
           I
Sbjct  66  I  66


>A0A1P8EHD2 Uncharacterized protein [Acinetobacter soli]
Length=66

 Score = 100 bits (250),  Expect = 3e-34
 Identities = 46/61 (75%), Positives = 52/61 (85%), Gaps = 0/61 (0%)

Query  10  HIVQEDFAQTILSLLKHQDIFDSFHYDTSTGQLRVCHALGEDLIREGMYLTAKYGNLVTS  69
           H+V +D ++TI+ L  H DIFDS HYD +T QLRVCHALGEDLIREGMYLTAKYGNLVTS
Sbjct  6   HVVTQDLSETIIWLFHHPDIFDSLHYDAATNQLRVCHALGEDLIREGMYLTAKYGNLVTS  65

Query  70  I  70
           I
Sbjct  66  I  66


>A0A0M1HV49 Uncharacterized protein [Acinetobacter sp. C15]
Length=66

 Score = 100 bits (250),  Expect = 3e-34
 Identities = 46/61 (75%), Positives = 52/61 (85%), Gaps = 0/61 (0%)

Query  10  HIVQEDFAQTILSLLKHQDIFDSFHYDTSTGQLRVCHALGEDLIREGMYLTAKYGNLVTS  69
           H+V +D ++TI+ L  H DIFDS HYD +T QLRVCHALGEDLIREGMYLTAKYGNLVTS
Sbjct  6   HVVTQDLSETIIWLFHHPDIFDSLHYDAATNQLRVCHALGEDLIREGMYLTAKYGNLVTS  65

Query  70  I  70
           I
Sbjct  66  I  66


>A0A3A8F486 Uncharacterized protein [Acinetobacter guerrae]
Length=69

 Score = 83.2 bits (204),  Expect = 3e-27
 Identities = 40/64 (63%), Positives = 50/64 (78%), Gaps = 0/64 (0%)

Query  6   DLNHHIVQEDFAQTILSLLKHQDIFDSFHYDTSTGQLRVCHALGEDLIREGMYLTAKYGN  65
           +L+HHIV +   QT++ L++HQDIFDS  +D  T QL V HA GED+IREGMYLTA+YG 
Sbjct  6   NLHHHIVTDQIDQTMIWLMQHQDIFDSLSFDIHTQQLIVRHAAGEDIIREGMYLTAQYGI  65

Query  66  LVTS  69
           LVTS
Sbjct  66  LVTS  69


>N9D9Q7 Uncharacterized protein [Acinetobacter ursingii ANC 3649]
Length=69

 Score = 82.4 bits (202),  Expect = 7e-27
 Identities = 40/62 (65%), Positives = 48/62 (77%), Gaps = 0/62 (0%)

Query  8   NHHIVQEDFAQTILSLLKHQDIFDSFHYDTSTGQLRVCHALGEDLIREGMYLTAKYGNLV  67
           +HHIV +    TI+ L++HQDIFDS ++D  T QL V HA GEDLIREGMYLTA+YG LV
Sbjct  8   DHHIVTDQLGLTIVWLMQHQDIFDSLNFDVQTQQLIVKHAAGEDLIREGMYLTAQYGILV  67

Query  68  TS  69
           TS
Sbjct  68  TS  69


>A0A3R9DAV4 Uncharacterized protein [Acinetobacter sp. FDAARGOS_515]
Length=69

 Score = 82.4 bits (202),  Expect = 7e-27
 Identities = 40/62 (65%), Positives = 48/62 (77%), Gaps = 0/62 (0%)

Query  8   NHHIVQEDFAQTILSLLKHQDIFDSFHYDTSTGQLRVCHALGEDLIREGMYLTAKYGNLV  67
           +HHIV +    TI+ L++HQDIFDS ++D  T QL V HA GEDLIREGMYLTA+YG LV
Sbjct  8   DHHIVTDQLGLTIVWLMQHQDIFDSLNFDVQTQQLIVKHAAGEDLIREGMYLTAQYGILV  67

Query  68  TS  69
           TS
Sbjct  68  TS  69


>A0A009YU42 Uncharacterized protein [Acinetobacter sp. 479375]
Length=69

 Score = 82.0 bits (201),  Expect = 1e-26
 Identities = 42/69 (61%), Positives = 49/69 (71%), Gaps = 0/69 (0%)

Query  1   MKALSDLNHHIVQEDFAQTILSLLKHQDIFDSFHYDTSTGQLRVCHALGEDLIREGMYLT  60
           M   S+ + HIV     QTI+ L++HQDIFDS  +D  T QL V HA GEDLIREGMYLT
Sbjct  1   MSNTSNRDQHIVTNQLDQTIIWLMQHQDIFDSLSFDVLTQQLTVKHAAGEDLIREGMYLT  60

Query  61  AKYGNLVTS  69
           A+YG LVTS
Sbjct  61  AQYGILVTS  69


>A0A2N6VDD1 AraC family transcriptional regulator [Acinetobacter 
ursingii]
Length=69

 Score = 82.0 bits (201),  Expect = 1e-26
 Identities = 42/69 (61%), Positives = 49/69 (71%), Gaps = 0/69 (0%)

Query  1   MKALSDLNHHIVQEDFAQTILSLLKHQDIFDSFHYDTSTGQLRVCHALGEDLIREGMYLT  60
           M   S+ + HIV     QTI+ L++HQDIFDS  +D  T QL V HA GEDLIREGMYLT
Sbjct  1   MSNTSNRDQHIVTNQLDQTIIWLMQHQDIFDSLSFDVLTQQLTVKHAAGEDLIREGMYLT  60

Query  61  AKYGNLVTS  69
           A+YG LVTS
Sbjct  61  AQYGILVTS  69


>A0A365PMD5 Uncharacterized protein [Acinetobacter junii]
Length=70

 Score = 80.1 bits (196),  Expect = 6e-26
 Identities = 38/61 (62%), Positives = 47/61 (77%), Gaps = 0/61 (0%)

Query  10  HIVQEDFAQTILSLLKHQDIFDSFHYDTSTGQLRVCHALGEDLIREGMYLTAKYGNLVTS  69
           + V E+ A TIL L++HQDIFDSFH+D  T +L V HA G D+IR+GM+L AKYG LVTS
Sbjct  10  YTVDENIANTILWLMQHQDIFDSFHFDVHTQELSVTHAAGVDIIRQGMFLNAKYGILVTS  69

Query  70  I  70
           I
Sbjct  70  I  70


>D0SJ51 Uncharacterized protein [Acinetobacter junii SH205]
Length=70

 Score = 80.1 bits (196),  Expect = 6e-26
 Identities = 38/61 (62%), Positives = 47/61 (77%), Gaps = 0/61 (0%)

Query  10  HIVQEDFAQTILSLLKHQDIFDSFHYDTSTGQLRVCHALGEDLIREGMYLTAKYGNLVTS  69
           + V E+ A TIL L++HQDIFDSFH+D  T +L V HA G D+IR+GM+L AKYG LVTS
Sbjct  10  YTVNENIANTILWLMQHQDIFDSFHFDVHTQELSVTHAAGVDIIRQGMFLNAKYGILVTS  69

Query  70  I  70
           I
Sbjct  70  I  70


>N8YJC5 Uncharacterized protein [Acinetobacter venetianus (strain 
ATCC 31012 / DSM 23050 / BCRC 14357 / CCUG 45561 / CIP 110063 
/ KCTC 2702 / LMG 19082 / RAG-1)]
Length=70

 Score = 79.0 bits (193),  Expect = 2e-25
 Identities = 39/61 (64%), Positives = 46/61 (75%), Gaps = 0/61 (0%)

Query  10  HIVQEDFAQTILSLLKHQDIFDSFHYDTSTGQLRVCHALGEDLIREGMYLTAKYGNLVTS  69
           +IV E  A TIL L+ HQ+IFDSFH+D  T +L V HA G D+IR GM+LTAKYG LVTS
Sbjct  10  YIVDEHIADTILWLMHHQEIFDSFHFDVHTQELSVTHAAGVDVIRVGMFLTAKYGILVTS  69

Query  70  I  70
           I
Sbjct  70  I  70


>A0A137YMG3 Uncharacterized protein [Acinetobacter venetianus]
Length=70

 Score = 79.0 bits (193),  Expect = 2e-25
 Identities = 39/61 (64%), Positives = 46/61 (75%), Gaps = 0/61 (0%)

Query  10  HIVQEDFAQTILSLLKHQDIFDSFHYDTSTGQLRVCHALGEDLIREGMYLTAKYGNLVTS  69
           +IV E  A TIL L+ HQ+IFDSFH+D  T +L V HA G D+IR GM+LTAKYG LVTS
Sbjct  10  YIVDEHIADTILWLMHHQEIFDSFHFDVHTQELSVTHAAGVDVIRVGMFLTAKYGILVTS  69

Query  70  I  70
           I
Sbjct  70  I  70


>A0A8I0V9V6 Uncharacterized protein [Acinetobacter sp. SK-43]
Length=70

 Score = 78.6 bits (192),  Expect = 2e-25
 Identities = 37/61 (61%), Positives = 46/61 (75%), Gaps = 0/61 (0%)

Query  10  HIVQEDFAQTILSLLKHQDIFDSFHYDTSTGQLRVCHALGEDLIREGMYLTAKYGNLVTS  69
           + V E+ A TI  L++HQDIFDSFH+D  T +L V HA G D+IR+GM+L AKYG LVTS
Sbjct  10  YTVDENIANTIFWLMQHQDIFDSFHFDVHTQELSVTHAAGVDIIRQGMFLNAKYGILVTS  69

Query  70  I  70
           I
Sbjct  70  I  70


>A0A2R4UQ06 Uncharacterized protein [Acinetobacter junii]
Length=70

 Score = 78.6 bits (192),  Expect = 2e-25
 Identities = 37/61 (61%), Positives = 46/61 (75%), Gaps = 0/61 (0%)

Query  10  HIVQEDFAQTILSLLKHQDIFDSFHYDTSTGQLRVCHALGEDLIREGMYLTAKYGNLVTS  69
           + V E+ A TI  L++HQDIFDSFH+D  T +L V HA G D+IR+GM+L AKYG LVTS
Sbjct  10  YTVDENIANTIFWLMQHQDIFDSFHFDVHTQELSVTHAAGVDIIRQGMFLNAKYGILVTS  69

Query  70  I  70
           I
Sbjct  70  I  70


>A0A150HW77 Uncharacterized protein [Acinetobacter venetianus]
Length=70

 Score = 78.6 bits (192),  Expect = 2e-25
 Identities = 39/61 (64%), Positives = 46/61 (75%), Gaps = 0/61 (0%)

Query  10  HIVQEDFAQTILSLLKHQDIFDSFHYDTSTGQLRVCHALGEDLIREGMYLTAKYGNLVTS  69
           +IV E  A TIL L+ HQ+IFDSFH+D  T +L V HA G D+IR GM+LTAKYG LVTS
Sbjct  10  YIVDEHIADTILWLMHHQEIFDSFHFDVHTQELSVTHAAGVDVIRIGMFLTAKYGILVTS  69

Query  70  I  70
           I
Sbjct  70  I  70


>A7FBB4 Uncharacterized protein [Acinetobacter baumannii (strain 
ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377)]
Length=70

 Score = 67.4 bits (163),  Expect = 6e-21
 Identities = 30/61 (49%), Positives = 42/61 (69%), Gaps = 0/61 (0%)

Query  10  HIVQEDFAQTILSLLKHQDIFDSFHYDTSTGQLRVCHALGEDLIREGMYLTAKYGNLVTS  69
           +I  ++ A T+  LL HQD+F+SFH+D  + +L V HA G D+IR G +L A YG LVTS
Sbjct  10  YIADDNIADTVTWLLHHQDVFESFHFDVLSQELSVTHAAGRDIIRVGTFLNATYGILVTS  69

Query  70  I  70
           +
Sbjct  70  V  70



Lambda      K        H        a         alpha
   0.331    0.143    0.426    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 43659


  Database: 3a041e1409e8c708ac6fcdb77bdb5973.TrEMBL.fasta
    Posted date:  Jun 3, 2024  11:18 AM
  Number of letters in database: 1,309
  Number of sequences in database:  19



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40