| Label | Strand | Begin | End | Length (bp) | Coding Probability | Best similarity | Evalue | % identity | Sequence |
| PH0026.1 | reverse | 26110 | 26346 | 237 | 0.758891 | Q9V2P6 TRANSLATION ELONGATION FACTOR EF-1, SUBUNIT BETA. | 2e-24 | 92 | View |
| PH0027.1 | direct | 27507 | 27881 | 375 | 0.734973 | Q9V2P4 HYPOTHETICAL 14.7 KDA PROTEIN. | 0 | 80 | View |
| PH0066.1 | reverse | 57685 | 57852 | 168 | 0.679393 | Q9V2K0 HYPOTHETICAL 26.0 KDA PROTEIN. | 6e-16 | 69 | View |
| PH0173.1 | direct | 153138 | 153401 | 264 | 0.666282 | O27155 CONSERVED PROTEIN. | 1e-08 | 44 | View |
| PH0209.1 | reverse | 184850 | 185059 | 210 | 0.567709 | Q9V279 HYPOTHETICAL 7.8 KDA PROTEIN. | 2e-29 | 87 | View |
| PH0305.1 | direct | 270746 | 271030 | 285 | 0.623221 | Q9UY47 ACYLPHOSPHATASE (ACYP). | 0 | 94 | View |
| PH0317.1 | direct | 287574 | 287750 | 177 | 0.542637 | Q9UZI1 HYPOTHETICAL 12.5 KDA PROTEIN. | 4e-13 | 79 | View |
| PH0389.1 | reverse | 351390 | 351563 | 174 | 0.721600 | O29647 HYPOTHETICAL 8.4 KDA PROTEIN. | 3e-21 | 82 | View |
| PHS008.1 | direct | 366611 | 366718 | 108 | 0.505802 | Q9UZH4 POLYSACCHARIDE BIOSYNTHESIS RELATED PROTEIN. | 3e-06 | 65 | View |
| PH0419.1 | direct | 380805 | 381005 | 201 | 0.590864 | Q9UZH4 POLYSACCHARIDE BIOSYNTHESIS RELATED PROTEIN. | 3e-16 | 57 | View |
| PH0529.1 | reverse | 475692 | 475976 | 285 | 0.659651 | Q9UYI7 LSU RIBOSOMAL PROTEIN L31E (RPL31E). | 2e-34 | 78 | View |
| PH0529.2 | reverse | 475985 | 476137 | 153 | 0.465647 | Q9UYI8 LSU RIBOSOMAL PROTEIN L39E (RPL39E). | 2e-14 | 70 | View |
| PH0584.1 | direct | 523088 | 523240 | 153 | 0.496180 | O29642 HYPOTHETICAL 12.1 KDA PROTEIN. | 4e-06 | 35 | View |
| PH0630.1 | reverse | 566820 | 566972 | 153 | 0.506643 | O29642 HYPOTHETICAL 12.1 KDA PROTEIN. | 4e-06 | 35 | View |
| PH0673.1 | reverse | 600122 | 600364 | 243 | 0.430013 | Q9UYY4 HYPOTHETICAL 8.4 KDA PROTEIN. | 5e-18 | 53 | View |
| PH0696.1 | reverse | 620522 | 620704 | 183 | 0.462230 | Q9UZ01 HYPOTHETICAL 16.8 KDA PROTEIN. | 2e-21 | 78 | View |
| PH0707.1 | direct | 630961 | 631056 | 96 | 0.466244 | O52629 BETA-GALACTOSIDASE. | 0.0002 | 75 | View |
| PH0718.1 | reverse | 642241 | 642537 | 297 | 0.526109 | Q9UZ29 HYPOTHETICAL 11.5 KDA PROTEIN. | 2e-34 | 70 | View |
| PH0744.1 | reverse | 658469 | 658759 | 291 | 0.422862 | Q9UZ45 HYPOTHETICAL 11.3 KDA PROTEIN. | 0 | 88 | View |
| PH0767.1 | reverse | 676541 | 676870 | 330 | 0.531891 | Q9UZ59 HYPOTHETICAL 13.1 KDA PROTEIN. | 2e-38 | 73 | View |
| PH0845.1 | direct | 752964 | 753080 | 117 | 0.463395 | O58705 HYPOTHETICAL 57.8 KDA PROTEIN PH0977. | 2e-05 | 90 | View |
| PH0878.1 | direct | 785731 | 785955 | 225 | 0.585813 | Q9UZB2 HYDROGENASE EXPRESSION/FORMATION PROTEIN (HYPC). | 2e-32 | 84 | View |
| PH0941.1 | reverse | 852179 | 852454 | 276 | 0.738157 | Q9UZE1 HYPOTHETICAL 7.8 KDA PROTEIN. | 6e-21 | 87 | View |
| PH0944.1 | reverse | 853582 | 853791 | 210 | 0.779340 | Q9UZE5 HYPOTHETICAL 9.8 KDA PROTEIN. | 2e-27 | 84 | View |
| PH1018.1 | reverse | 923655 | 923906 | 252 | 0.585743 | Q9V034 MOLYBDOPTERIN CONVERTING FACTOR RELATED, SUBUNIT 1. | 3e-38 | 88 | View |
| PH1106.1 | reverse | 1005392 | 1005592 | 201 | 0.750797 | O27775 HYPOTHETICAL 7.8 KDA PROTEIN. | 3e-06 | 41 | View |
| PH1126.1 | reverse | 1023196 | 1023390 | 195 | 0.517015 | Q9UZN9 HYPOTHETICAL 12.9 KDA PROTEIN. | 8e-14 | 60 | View |
| PH1152.1 | reverse | 1047129 | 1047347 | 219 | 0.402953 | Q9UZP2 HYPOTHETICAL 12.7 KDA PROTEIN. | 7e-29 | 80 | View |
| PH1212.1 | reverse | 1091678 | 1091926 | 249 | 0.800882 | Q9UZT8 HYPOTHETICAL 10.0 KDA PROTEIN. | 9.99995e-41 | 89 | View |
| PH1244.1 | direct | 1119454 | 1119708 | 255 | 0.590513 | Q57831 HYPOTHETICAL PROTEIN MJ0386. | 8e-32 | 73 | View |
| PH1263.1 | reverse | 1137281 | 1137469 | 189 | 0.648013 | Q60260 HYPOTHETICAL PROTEIN MJECL04. | 8e-18 | 61 | View |
| PH1296.1 | direct | 1166058 | 1166267 | 210 | 0.582869 | Q9V1A4 HYPOTHETICAL 15.9 KDA PROTEIN. | 3e-09 | 45 | View |
| PH1296.2 | reverse | 1166277 | 1166501 | 225 | 0.717189 | Q58021 HYPOTHETICAL PROTEIN MJ0604. | 6e-12 | 57 | View |
| PH1316.1 | direct | 1185328 | 1185534 | 207 | 0.483461 | Q9V0G0 SSU RIBOSOMAL PROTEIN S17E (RPS17E). | 3e-32 | 98 | View |
| PH1359.1 | reverse | 1226423 | 1226686 | 264 | 0.604873 | O29902 HYPOTHETICAL 19.1 KDA PROTEIN. | 5e-10 | 36 | View |
| PH1427.1 | direct | 1283111 | 1283395 | 285 | 0.537293 | Q9V0R0 HYPOTHETICAL 9.5 KDA PROTEIN. | 6e-37 | 90 | View |
| PHS039.1 | direct | 1284055 | 1284300 | 246 | 0.691801 | O59123 HYPOTHETICAL 26.5 KDA PROTEIN PH1454. | 6e-10 | 46 | View |
| PH1454.1 | reverse | 1303449 | 1303688 | 240 | 0.821258 | O74012 HYPOTHETICAL 6.7 KDA PROTEIN PHS039. | 2e-10 | 51 | View |
| PH1455.1 | reverse | 1304089 | 1304340 | 252 | 0.615886 | Q9V0T4 HYPOTHETICAL 9.3 KDA PROTEIN. | 2e-39 | 98 | View |
| PH1620.1 | reverse | 1438272 | 1438562 | 291 | 0.667324 | Q9V183 HYPOTHETICAL 19.1 KDA PROTEIN. | 6e-34 | 71 | View |
| PH1669.1 | direct | 1470550 | 1470834 | 285 | 0.707360 | Q9V1C6 HYPOTHETICAL 10.6 KDA PROTEIN. | 5e-32 | 65 | View |
| PH1714.1 | reverse | 1507179 | 1507391 | 213 | 0.636941 | Q9V1M9 HYPOTHETICAL 11.5 KDA PROTEIN. | 9e-15 | 55 | View |
| PH1721.1 | reverse | 1512130 | 1512291 | 162 | 0.586481 | Q9ZND7 ORFF. | 0.0003 | 38 | View |
| PH1745.1 | direct | 1529986 | 1530174 | 189 | 0.659829 | Q9V1W8 HYPOTHETICAL 11.0 KDA PROTEIN. | 1e-17 | 91 | View |
| PH1771.1 | reverse | 1545214 | 1545510 | 297 | 0.488618 | Q9V1U3 PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG. | 5.99756e-43 | 85 | View |
| PH1856.1 | direct | 1613242 | 1613481 | 240 | 0.588280 | Q9ZBR8 HYPOTHETICAL 8.3 KDA PROTEIN. | 6e-08 | 33 | View |
| PH1893.1 | direct | 1645712 | 1646065 | 354 | 0.744515 | Q9V1Z0 HYPOTHETICAL 13.6 KDA PROTEIN. | 8.40779e-45 | 74 | View |
| PH1899.1 | reverse | 1654076 | 1654321 | 246 | 0.445224 | Q9V1Z9 HYPOTHETICAL 9.0 KDA PROTEIN. | 2e-26 | 68 | View |
| PH1909.1 | direct | 1661808 | 1662104 | 297 | 0.714000 | Q9UY20 SSU RIBOSOMAL PROTEIN S24E (RPS24E). | 2e-40 | 82 | View |
| PH1939.1 | reverse | 1682199 | 1682393 | 195 | 0.446246 | Q9UXZ3 SSU RIBOSOMAL PROTEIN S27E (RPS27E). | 1e-30 | 93 | View |