| Label | Strand | Begin | End | Length (bp) | Coding Probability | Best similarity | Evalue | % identity | Sequence |
| PAB2322.1 | reverse | 38078 | 38350 | 273 | 0.525701 | O54654 ORF H1620. | 6e-07 | 38 | View |
| PAB2062.1 | direct | 412920 | 413159 | 240 | 0.699440 | Q9ZBR8 HYPOTHETICAL 8.3 KDA PROTEIN. | 6e-08 | 33 | View |
| PAB2035.1 | reverse | 463707 | 464063 | 357 | 0.537092 | Q9YDQ2 HYPOTHETICAL 14.7 KDA PROTEIN APE0865. | 9e-09 | 48 | View |
| PAB0325.1 | reverse | 467982 | 468176 | 195 | 0.588345 | O59316 HYPOTHETICAL 32.7 KDA PROTEIN PH1685. | 2e-11 | 51 | View |
| PAB0463.1 | direct | 633875 | 634231 | 357 | 0.649254 | No significant database matches | | | View |
| PAB0463.2 | reverse | 634227 | 634616 | 390 | 0.724452 | No significant database matches | | | View |
| PAB0469.1 | reverse | 643110 | 643535 | 426 | 0.737313 | O59146 HYPOTHETICAL 16.0 KDA PROTEIN PH1477. | 0 | 87 | View |
| PAB1900.1 | reverse | 656384 | 656557 | 174 | 0.551669 | O59131 HYPOTHETICAL 54.1 KDA PROTEIN PH1462. | 4e-14 | 67 | View |
| PAB0486.1 | direct | 662389 | 662604 | 216 | 0.631156 | O74012 HYPOTHETICAL 6.7 KDA PROTEIN PHS039. | 6e-08 | 53 | View |
| PAB1886.1 | reverse | 682118 | 682405 | 288 | 0.473596 | O74012 HYPOTHETICAL 6.7 KDA PROTEIN PHS039. | 0.001 | 35 | View |
| PAB1672.1 | reverse | 1009637 | 1009900 | 264 | 0.644564 | O28094 HYPOTHETICAL 8.8 KDA PROTEIN. | 7e-05 | 46 | View |
| PAB1650.1 | reverse | 1041388 | 1041540 | 153 | 0.623882 | Q9UYK6 HYPOTHETICAL 30.4 KDA PROTEIN. | 1e-13 | 62 | View |
| PAB0776.1 | direct | 1117930 | 1118118 | 189 | 0.555613 | O58138 294AA LONG HYPOTHETICAL GLYCOSYL TRANSFERASE. | 3e-11 | 52 | View |
| PAB1598.1 | direct | 1122851 | 1123000 | 150 | 0.479992 | O29647 HYPOTHETICAL 8.4 KDA PROTEIN. | 8e-14 | 76 | View |
| PAB1582.1 | reverse | 1156926 | 1157195 | 270 | 0.824207 | Q9Y8L6 HYPOTHETICAL 16.3 KDA PROTEIN APE2616. | 3e-11 | 41 | View |
| PAB1555.1 | reverse | 1203951 | 1204229 | 279 | 0.678989 | Q9Y9X6 HYPOTHETICAL 11.6 KDA PROTEIN APE2163. | 0.0002 | 31 | View |
| PAB1522.1 | direct | 1251723 | 1251908 | 186 | 0.453316 | O73988 HYPOTHETICAL 7.3 KDA PROTEIN PHS024. | 2e-14 | 100 | View |
| PAB1503.1 | reverse | 1278390 | 1278575 | 186 | 0.628258 | O58458 HYPOTHETICAL 31.0 KDA PROTEIN PH0727. | 3e-19 | 76 | View |
| PAB1409.1 | reverse | 1420375 | 1422882 | 2508 | 0.518480 | No significant database matches | | | View |
| PAB1409.2 | direct | 1422587 | 1422928 | 342 | 0.440109 | No significant database matches | | | View |
| PAB1399.1 | reverse | 1431884 | 1432102 | 219 | 0.657052 | O74012 HYPOTHETICAL 6.7 KDA PROTEIN PHS039. | 0.0002 | 37 | View |
| PAB1037.1 | direct | 1529331 | 1529537 | 207 | 0.569432 | O58558 HYPOTHETICAL 13.7 KDA PROTEIN PH0828. | 2e-17 | 57 | View |
| PAB1080.1 | reverse | 1611280 | 1611441 | 162 | 0.571778 | O58056 433AA LONG HYPOTHETICAL PHOSPHORIBOSYLGLYCINAMIDE FORMYL TRA | 2e-11 | 64 | View |
| PAB1080.2 | reverse | 1611594 | 1611797 | 204 | 0.640584 | O29176 HYPOTHETICAL 16.2 KDA PROTEIN. | 1e-09 | 58 | View |
| PAB1080.3 | reverse | 1612177 | 1612368 | 192 | 0.727349 | O58600 HYPOTHETICAL 18.1 KDA PROTEIN PH0870. | 9e-17 | 65 | View |
| PAB1080.4 | reverse | 1613007 | 1613093 | 87 | 0.481945 | Q9UYW1 HYPOTHETICAL 46.6 KDA PROTEIN. | 0.0006 | 85 | View |
| PAB1105.1 | direct | 1669857 | 1670039 | 183 | 0.442931 | Q9UY22 DNA-DIRECTED RNA POLYMERASE, SUBUNIT E'' (RPOE2) (FRAGMENT). | 2e-30 | 100 | View |